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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 20 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • The sequence is converted from residues with experimentally determined coordinates in the structure; residues not observed in the 3D structure are excluded.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (resolution)
    Site
    #
    RNA
    sequence
    EC
    number
    GO
    terms
    UniProt PubMed Binding
    affinity
    1 8e5t:5
    (4.0)
    BS01 >8e5t:1
    guuugaccucaaaucagguaggaguacccgcugaaaagcggaggaaaaga
    aaccaaccgggauugccuuaguaacggcgagugaagcggcaaaagcucaa
    auuugaaaucugguacggugcccgaguuguaauuuggagagggcaacuug
    uaaagugccuucgaagagucgaguuguuuugcagcucuaaguggguggua
    aauuccaucuaaagcuaaauauuggcgagagacuuugaaaagagaguaaa
    uuguugaaagggaagggcauuugaucagacauggugucacugggccagca
    ucaguuuugguggcaggauaaauccauaggaauguagcuugccucgguaa
    guauuauagccugugggaauacugccagcugggacugaggacugcgacgu
    aagucaaggaugcuggcauaaugguuauaugccgcccgucuugaaacacg
    gaccaaggagucuaacgucuaugcgaguguuuggguguaaaacccauacg
    cguagguuggggccucgcaagaggugcacaaucgaccgugaguaagagca
    uagcuguugggaguuccugccgaaguagaguuaaggugccggaauacacg
    cucaucagaggcgcucaagcguguuaccuauacucuaccgucaggguuga
    uaugaugcccugacgaguaggcaggcguggaggucagugacgaagccuag
    accguaaggucgggucgaacggccucuagugcagaucuuggug
    ..........................<<<<<<....>>>>>.>...<...
    ..<<....>>..<<<<<......<<.....>>.....>>>>>..<<<..<
    ........<<.<<<<<.>>>>>.>>........>....<<<<<<<.<<..
    ...>>>>>>>>>........<<<<<<<...>>>>>>>.....<<<<<<..
    ....>>>>>>..>>>....>............<<<<....>>>>......
    ...............<<<<<.<<<<<<..<..<<<<.>>>>.><<<<<<<
    .<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<<<......>>>
    >>.......>>>>>>>.>.>.>>>>>.>>>>>>>>>>........<<<..
    ..>>>.....>>>>>>>....>>>>>>.>>>>>..<<<<........>>>
    ><<<<<<<...<<<<<<.<<<<<<..<<<<.<<<<<.....>>>>>.>>>
    >...<<<<<..<<<<<....>>>>>...>>>>>.<<.....>>....>>>
    >>>.>>>>>>..<<.<<<<<<...<<<<<<<..<<<<(((.....<<<<<
    <.....<<.))).>>...>>>>>>.>>>>..>>>>>>><<<<<<<<<...
    ......>>>>>>>>>....>>>>>>..<<<<<<<<.<<......<<<<.<
    <<<....>>>>>>>>...>>>>>>>>>>..>>...>>>>>>>.
    ? GO:0000027 ... Q12176 37037974
    2 8e5t:6
    (4.0)
    BS01 >8e5t:1
    guuugaccucaaaucagguaggaguacccgcugaaaagcggaggaaaaga
    aaccaaccgggauugccuuaguaacggcgagugaagcggcaaaagcucaa
    auuugaaaucugguacggugcccgaguuguaauuuggagagggcaacuug
    uaaagugccuucgaagagucgaguuguuuugcagcucuaaguggguggua
    aauuccaucuaaagcuaaauauuggcgagagacuuugaaaagagaguaaa
    uuguugaaagggaagggcauuugaucagacauggugucacugggccagca
    ucaguuuugguggcaggauaaauccauaggaauguagcuugccucgguaa
    guauuauagccugugggaauacugccagcugggacugaggacugcgacgu
    aagucaaggaugcuggcauaaugguuauaugccgcccgucuugaaacacg
    gaccaaggagucuaacgucuaugcgaguguuuggguguaaaacccauacg
    cguagguuggggccucgcaagaggugcacaaucgaccgugaguaagagca
    uagcuguugggaguuccugccgaaguagaguuaaggugccggaauacacg
    cucaucagaggcgcucaagcguguuaccuauacucuaccgucaggguuga
    uaugaugcccugacgaguaggcaggcguggaggucagugacgaagccuag
    accguaaggucgggucgaacggccucuagugcagaucuuggug
    ..........................<<<<<<....>>>>>.>...<...
    ..<<....>>..<<<<<......<<.....>>.....>>>>>..<<<..<
    ........<<.<<<<<.>>>>>.>>........>....<<<<<<<.<<..
    ...>>>>>>>>>........<<<<<<<...>>>>>>>.....<<<<<<..
    ....>>>>>>..>>>....>............<<<<....>>>>......
    ...............<<<<<.<<<<<<..<..<<<<.>>>>.><<<<<<<
    .<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<<<......>>>
    >>.......>>>>>>>.>.>.>>>>>.>>>>>>>>>>........<<<..
    ..>>>.....>>>>>>>....>>>>>>.>>>>>..<<<<........>>>
    ><<<<<<<...<<<<<<.<<<<<<..<<<<.<<<<<.....>>>>>.>>>
    >...<<<<<..<<<<<....>>>>>...>>>>>.<<.....>>....>>>
    >>>.>>>>>>..<<.<<<<<<...<<<<<<<..<<<<(((.....<<<<<
    <.....<<.))).>>...>>>>>>.>>>>..>>>>>>><<<<<<<<<...
    ......>>>>>>>>>....>>>>>>..<<<<<<<<.<<......<<<<.<
    <<<....>>>>>>>>...>>>>>>>>>>..>>...>>>>>>>.
    ? GO:0003729 ... P39744 37037974
    3 8e5t:C
    (4.0)
    BS01 >8e5t:1
    guuugaccucaaaucagguaggaguacccgcugaaaagcggaggaaaaga
    aaccaaccgggauugccuuaguaacggcgagugaagcggcaaaagcucaa
    auuugaaaucugguacggugcccgaguuguaauuuggagagggcaacuug
    uaaagugccuucgaagagucgaguuguuuugcagcucuaaguggguggua
    aauuccaucuaaagcuaaauauuggcgagagacuuugaaaagagaguaaa
    uuguugaaagggaagggcauuugaucagacauggugucacugggccagca
    ucaguuuugguggcaggauaaauccauaggaauguagcuugccucgguaa
    guauuauagccugugggaauacugccagcugggacugaggacugcgacgu
    aagucaaggaugcuggcauaaugguuauaugccgcccgucuugaaacacg
    gaccaaggagucuaacgucuaugcgaguguuuggguguaaaacccauacg
    cguagguuggggccucgcaagaggugcacaaucgaccgugaguaagagca
    uagcuguugggaguuccugccgaaguagaguuaaggugccggaauacacg
    cucaucagaggcgcucaagcguguuaccuauacucuaccgucaggguuga
    uaugaugcccugacgaguaggcaggcguggaggucagugacgaagccuag
    accguaaggucgggucgaacggccucuagugcagaucuuggug
    ..........................<<<<<<....>>>>>.>...<...
    ..<<....>>..<<<<<......<<.....>>.....>>>>>..<<<..<
    ........<<.<<<<<.>>>>>.>>........>....<<<<<<<.<<..
    ...>>>>>>>>>........<<<<<<<...>>>>>>>.....<<<<<<..
    ....>>>>>>..>>>....>............<<<<....>>>>......
    ...............<<<<<.<<<<<<..<..<<<<.>>>>.><<<<<<<
    .<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<<<......>>>
    >>.......>>>>>>>.>.>.>>>>>.>>>>>>>>>>........<<<..
    ..>>>.....>>>>>>>....>>>>>>.>>>>>..<<<<........>>>
    ><<<<<<<...<<<<<<.<<<<<<..<<<<.<<<<<.....>>>>>.>>>
    >...<<<<<..<<<<<....>>>>>...>>>>>.<<.....>>....>>>
    >>>.>>>>>>..<<.<<<<<<...<<<<<<<..<<<<(((.....<<<<<
    <.....<<.))).>>...>>>>>>.>>>>..>>>>>>><<<<<<<<<...
    ......>>>>>>>>>....>>>>>>..<<<<<<<<.<<......<<<<.<
    <<<....>>>>>>>>...>>>>>>>>>>..>>...>>>>>>>.
    ? GO:0002181 ... P10664 37037974
    4 8e5t:D
    (4.0)
    BS01 >8e5t:1
    guuugaccucaaaucagguaggaguacccgcugaaaagcggaggaaaaga
    aaccaaccgggauugccuuaguaacggcgagugaagcggcaaaagcucaa
    auuugaaaucugguacggugcccgaguuguaauuuggagagggcaacuug
    uaaagugccuucgaagagucgaguuguuuugcagcucuaaguggguggua
    aauuccaucuaaagcuaaauauuggcgagagacuuugaaaagagaguaaa
    uuguugaaagggaagggcauuugaucagacauggugucacugggccagca
    ucaguuuugguggcaggauaaauccauaggaauguagcuugccucgguaa
    guauuauagccugugggaauacugccagcugggacugaggacugcgacgu
    aagucaaggaugcuggcauaaugguuauaugccgcccgucuugaaacacg
    gaccaaggagucuaacgucuaugcgaguguuuggguguaaaacccauacg
    cguagguuggggccucgcaagaggugcacaaucgaccgugaguaagagca
    uagcuguugggaguuccugccgaaguagaguuaaggugccggaauacacg
    cucaucagaggcgcucaagcguguuaccuauacucuaccgucaggguuga
    uaugaugcccugacgaguaggcaggcguggaggucagugacgaagccuag
    accguaaggucgggucgaacggccucuagugcagaucuuggug
    ..........................<<<<<<....>>>>>.>...<...
    ..<<....>>..<<<<<......<<.....>>.....>>>>>..<<<..<
    ........<<.<<<<<.>>>>>.>>........>....<<<<<<<.<<..
    ...>>>>>>>>>........<<<<<<<...>>>>>>>.....<<<<<<..
    ....>>>>>>..>>>....>............<<<<....>>>>......
    ...............<<<<<.<<<<<<..<..<<<<.>>>>.><<<<<<<
    .<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<<<......>>>
    >>.......>>>>>>>.>.>.>>>>>.>>>>>>>>>>........<<<..
    ..>>>.....>>>>>>>....>>>>>>.>>>>>..<<<<........>>>
    ><<<<<<<...<<<<<<.<<<<<<..<<<<.<<<<<.....>>>>>.>>>
    >...<<<<<..<<<<<....>>>>>...>>>>>.<<.....>>....>>>
    >>>.>>>>>>..<<.<<<<<<...<<<<<<<..<<<<(((.....<<<<<
    <.....<<.))).>>...>>>>>>.>>>>..>>>>>>><<<<<<<<<...
    ......>>>>>>>>>....>>>>>>..<<<<<<<<.<<......<<<<.<
    <<<....>>>>>>>>...>>>>>>>>>>..>>...>>>>>>>.
    ? GO:0000460 ... P10962 37037974
    5 8e5t:E
    (4.0)
    BS01 >8e5t:1
    guuugaccucaaaucagguaggaguacccgcugaaaagcggaggaaaaga
    aaccaaccgggauugccuuaguaacggcgagugaagcggcaaaagcucaa
    auuugaaaucugguacggugcccgaguuguaauuuggagagggcaacuug
    uaaagugccuucgaagagucgaguuguuuugcagcucuaaguggguggua
    aauuccaucuaaagcuaaauauuggcgagagacuuugaaaagagaguaaa
    uuguugaaagggaagggcauuugaucagacauggugucacugggccagca
    ucaguuuugguggcaggauaaauccauaggaauguagcuugccucgguaa
    guauuauagccugugggaauacugccagcugggacugaggacugcgacgu
    aagucaaggaugcuggcauaaugguuauaugccgcccgucuugaaacacg
    gaccaaggagucuaacgucuaugcgaguguuuggguguaaaacccauacg
    cguagguuggggccucgcaagaggugcacaaucgaccgugaguaagagca
    uagcuguugggaguuccugccgaaguagaguuaaggugccggaauacacg
    cucaucagaggcgcucaagcguguuaccuauacucuaccgucaggguuga
    uaugaugcccugacgaguaggcaggcguggaggucagugacgaagccuag
    accguaaggucgggucgaacggccucuagugcagaucuuggug
    ..........................<<<<<<....>>>>>.>...<...
    ..<<....>>..<<<<<......<<.....>>.....>>>>>..<<<..<
    ........<<.<<<<<.>>>>>.>>........>....<<<<<<<.<<..
    ...>>>>>>>>>........<<<<<<<...>>>>>>>.....<<<<<<..
    ....>>>>>>..>>>....>............<<<<....>>>>......
    ...............<<<<<.<<<<<<..<..<<<<.>>>>.><<<<<<<
    .<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<<<......>>>
    >>.......>>>>>>>.>.>.>>>>>.>>>>>>>>>>........<<<..
    ..>>>.....>>>>>>>....>>>>>>.>>>>>..<<<<........>>>
    ><<<<<<<...<<<<<<.<<<<<<..<<<<.<<<<<.....>>>>>.>>>
    >...<<<<<..<<<<<....>>>>>...>>>>>.<<.....>>....>>>
    >>>.>>>>>>..<<.<<<<<<...<<<<<<<..<<<<(((.....<<<<<
    <.....<<.))).>>...>>>>>>.>>>>..>>>>>>><<<<<<<<<...
    ......>>>>>>>>>....>>>>>>..<<<<<<<<.<<......<<<<.<
    <<<....>>>>>>>>...>>>>>>>>>>..>>...>>>>>>>.
    ? GO:0000027 ... Q02326 37037974
    6 8e5t:F
    (4.0)
    BS01 >8e5t:1
    guuugaccucaaaucagguaggaguacccgcugaaaagcggaggaaaaga
    aaccaaccgggauugccuuaguaacggcgagugaagcggcaaaagcucaa
    auuugaaaucugguacggugcccgaguuguaauuuggagagggcaacuug
    uaaagugccuucgaagagucgaguuguuuugcagcucuaaguggguggua
    aauuccaucuaaagcuaaauauuggcgagagacuuugaaaagagaguaaa
    uuguugaaagggaagggcauuugaucagacauggugucacugggccagca
    ucaguuuugguggcaggauaaauccauaggaauguagcuugccucgguaa
    guauuauagccugugggaauacugccagcugggacugaggacugcgacgu
    aagucaaggaugcuggcauaaugguuauaugccgcccgucuugaaacacg
    gaccaaggagucuaacgucuaugcgaguguuuggguguaaaacccauacg
    cguagguuggggccucgcaagaggugcacaaucgaccgugaguaagagca
    uagcuguugggaguuccugccgaaguagaguuaaggugccggaauacacg
    cucaucagaggcgcucaagcguguuaccuauacucuaccgucaggguuga
    uaugaugcccugacgaguaggcaggcguggaggucagugacgaagccuag
    accguaaggucgggucgaacggccucuagugcagaucuuggug
    ..........................<<<<<<....>>>>>.>...<...
    ..<<....>>..<<<<<......<<.....>>.....>>>>>..<<<..<
    ........<<.<<<<<.>>>>>.>>........>....<<<<<<<.<<..
    ...>>>>>>>>>........<<<<<<<...>>>>>>>.....<<<<<<..
    ....>>>>>>..>>>....>............<<<<....>>>>......
    ...............<<<<<.<<<<<<..<..<<<<.>>>>.><<<<<<<
    .<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<<<......>>>
    >>.......>>>>>>>.>.>.>>>>>.>>>>>>>>>>........<<<..
    ..>>>.....>>>>>>>....>>>>>>.>>>>>..<<<<........>>>
    ><<<<<<<...<<<<<<.<<<<<<..<<<<.<<<<<.....>>>>>.>>>
    >...<<<<<..<<<<<....>>>>>...>>>>>.<<.....>>....>>>
    >>>.>>>>>>..<<.<<<<<<...<<<<<<<..<<<<(((.....<<<<<
    <.....<<.))).>>...>>>>>>.>>>>..>>>>>>><<<<<<<<<...
    ......>>>>>>>>>....>>>>>>..<<<<<<<<.<<......<<<<.<
    <<<....>>>>>>>>...>>>>>>>>>>..>>...>>>>>>>.
    ? GO:0000463 ... P05737 37037974
    7 8e5t:G
    (4.0)
    BS01 >8e5t:1
    guuugaccucaaaucagguaggaguacccgcugaaaagcggaggaaaaga
    aaccaaccgggauugccuuaguaacggcgagugaagcggcaaaagcucaa
    auuugaaaucugguacggugcccgaguuguaauuuggagagggcaacuug
    uaaagugccuucgaagagucgaguuguuuugcagcucuaaguggguggua
    aauuccaucuaaagcuaaauauuggcgagagacuuugaaaagagaguaaa
    uuguugaaagggaagggcauuugaucagacauggugucacugggccagca
    ucaguuuugguggcaggauaaauccauaggaauguagcuugccucgguaa
    guauuauagccugugggaauacugccagcugggacugaggacugcgacgu
    aagucaaggaugcuggcauaaugguuauaugccgcccgucuugaaacacg
    gaccaaggagucuaacgucuaugcgaguguuuggguguaaaacccauacg
    cguagguuggggccucgcaagaggugcacaaucgaccgugaguaagagca
    uagcuguugggaguuccugccgaaguagaguuaaggugccggaauacacg
    cucaucagaggcgcucaagcguguuaccuauacucuaccgucaggguuga
    uaugaugcccugacgaguaggcaggcguggaggucagugacgaagccuag
    accguaaggucgggucgaacggccucuagugcagaucuuggug
    ..........................<<<<<<....>>>>>.>...<...
    ..<<....>>..<<<<<......<<.....>>.....>>>>>..<<<..<
    ........<<.<<<<<.>>>>>.>>........>....<<<<<<<.<<..
    ...>>>>>>>>>........<<<<<<<...>>>>>>>.....<<<<<<..
    ....>>>>>>..>>>....>............<<<<....>>>>......
    ...............<<<<<.<<<<<<..<..<<<<.>>>>.><<<<<<<
    .<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<<<......>>>
    >>.......>>>>>>>.>.>.>>>>>.>>>>>>>>>>........<<<..
    ..>>>.....>>>>>>>....>>>>>>.>>>>>..<<<<........>>>
    ><<<<<<<...<<<<<<.<<<<<<..<<<<.<<<<<.....>>>>>.>>>
    >...<<<<<..<<<<<....>>>>>...>>>>>.<<.....>>....>>>
    >>>.>>>>>>..<<.<<<<<<...<<<<<<<..<<<<(((.....<<<<<
    <.....<<.))).>>...>>>>>>.>>>>..>>>>>>><<<<<<<<<...
    ......>>>>>>>>>....>>>>>>..<<<<<<<<.<<......<<<<.<
    <<<....>>>>>>>>...>>>>>>>>>>..>>...>>>>>>>.
    ? GO:0000470 ... P17076 37037974
    8 8e5t:L
    (4.0)
    BS01 >8e5t:1
    guuugaccucaaaucagguaggaguacccgcugaaaagcggaggaaaaga
    aaccaaccgggauugccuuaguaacggcgagugaagcggcaaaagcucaa
    auuugaaaucugguacggugcccgaguuguaauuuggagagggcaacuug
    uaaagugccuucgaagagucgaguuguuuugcagcucuaaguggguggua
    aauuccaucuaaagcuaaauauuggcgagagacuuugaaaagagaguaaa
    uuguugaaagggaagggcauuugaucagacauggugucacugggccagca
    ucaguuuugguggcaggauaaauccauaggaauguagcuugccucgguaa
    guauuauagccugugggaauacugccagcugggacugaggacugcgacgu
    aagucaaggaugcuggcauaaugguuauaugccgcccgucuugaaacacg
    gaccaaggagucuaacgucuaugcgaguguuuggguguaaaacccauacg
    cguagguuggggccucgcaagaggugcacaaucgaccgugaguaagagca
    uagcuguugggaguuccugccgaaguagaguuaaggugccggaauacacg
    cucaucagaggcgcucaagcguguuaccuauacucuaccgucaggguuga
    uaugaugcccugacgaguaggcaggcguggaggucagugacgaagccuag
    accguaaggucgggucgaacggccucuagugcagaucuuggug
    ..........................<<<<<<....>>>>>.>...<...
    ..<<....>>..<<<<<......<<.....>>.....>>>>>..<<<..<
    ........<<.<<<<<.>>>>>.>>........>....<<<<<<<.<<..
    ...>>>>>>>>>........<<<<<<<...>>>>>>>.....<<<<<<..
    ....>>>>>>..>>>....>............<<<<....>>>>......
    ...............<<<<<.<<<<<<..<..<<<<.>>>>.><<<<<<<
    .<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<<<......>>>
    >>.......>>>>>>>.>.>.>>>>>.>>>>>>>>>>........<<<..
    ..>>>.....>>>>>>>....>>>>>>.>>>>>..<<<<........>>>
    ><<<<<<<...<<<<<<.<<<<<<..<<<<.<<<<<.....>>>>>.>>>
    >...<<<<<..<<<<<....>>>>>...>>>>>.<<.....>>....>>>
    >>>.>>>>>>..<<.<<<<<<...<<<<<<<..<<<<(((.....<<<<<
    <.....<<.))).>>...>>>>>>.>>>>..>>>>>>><<<<<<<<<...
    ......>>>>>>>>>....>>>>>>..<<<<<<<<.<<......<<<<.<
    <<<....>>>>>>>>...>>>>>>>>>>..>>...>>>>>>>.
    ? GO:0002181 ... Q12690 37037974
    9 8e5t:M
    (4.0)
    BS01 >8e5t:1
    guuugaccucaaaucagguaggaguacccgcugaaaagcggaggaaaaga
    aaccaaccgggauugccuuaguaacggcgagugaagcggcaaaagcucaa
    auuugaaaucugguacggugcccgaguuguaauuuggagagggcaacuug
    uaaagugccuucgaagagucgaguuguuuugcagcucuaaguggguggua
    aauuccaucuaaagcuaaauauuggcgagagacuuugaaaagagaguaaa
    uuguugaaagggaagggcauuugaucagacauggugucacugggccagca
    ucaguuuugguggcaggauaaauccauaggaauguagcuugccucgguaa
    guauuauagccugugggaauacugccagcugggacugaggacugcgacgu
    aagucaaggaugcuggcauaaugguuauaugccgcccgucuugaaacacg
    gaccaaggagucuaacgucuaugcgaguguuuggguguaaaacccauacg
    cguagguuggggccucgcaagaggugcacaaucgaccgugaguaagagca
    uagcuguugggaguuccugccgaaguagaguuaaggugccggaauacacg
    cucaucagaggcgcucaagcguguuaccuauacucuaccgucaggguuga
    uaugaugcccugacgaguaggcaggcguggaggucagugacgaagccuag
    accguaaggucgggucgaacggccucuagugcagaucuuggug
    ..........................<<<<<<....>>>>>.>...<...
    ..<<....>>..<<<<<......<<.....>>.....>>>>>..<<<..<
    ........<<.<<<<<.>>>>>.>>........>....<<<<<<<.<<..
    ...>>>>>>>>>........<<<<<<<...>>>>>>>.....<<<<<<..
    ....>>>>>>..>>>....>............<<<<....>>>>......
    ...............<<<<<.<<<<<<..<..<<<<.>>>>.><<<<<<<
    .<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<<<......>>>
    >>.......>>>>>>>.>.>.>>>>>.>>>>>>>>>>........<<<..
    ..>>>.....>>>>>>>....>>>>>>.>>>>>..<<<<........>>>
    ><<<<<<<...<<<<<<.<<<<<<..<<<<.<<<<<.....>>>>>.>>>
    >...<<<<<..<<<<<....>>>>>...>>>>>.<<.....>>....>>>
    >>>.>>>>>>..<<.<<<<<<...<<<<<<<..<<<<(((.....<<<<<
    <.....<<.))).>>...>>>>>>.>>>>..>>>>>>><<<<<<<<<...
    ......>>>>>>>>>....>>>>>>..<<<<<<<<.<<......<<<<.<
    <<<....>>>>>>>>...>>>>>>>>>>..>>...>>>>>>>.
    ? GO:0000027 ... P36105 37037974
    10 8e5t:N
    (4.0)
    BS01 >8e5t:1
    guuugaccucaaaucagguaggaguacccgcugaaaagcggaggaaaaga
    aaccaaccgggauugccuuaguaacggcgagugaagcggcaaaagcucaa
    auuugaaaucugguacggugcccgaguuguaauuuggagagggcaacuug
    uaaagugccuucgaagagucgaguuguuuugcagcucuaaguggguggua
    aauuccaucuaaagcuaaauauuggcgagagacuuugaaaagagaguaaa
    uuguugaaagggaagggcauuugaucagacauggugucacugggccagca
    ucaguuuugguggcaggauaaauccauaggaauguagcuugccucgguaa
    guauuauagccugugggaauacugccagcugggacugaggacugcgacgu
    aagucaaggaugcuggcauaaugguuauaugccgcccgucuugaaacacg
    gaccaaggagucuaacgucuaugcgaguguuuggguguaaaacccauacg
    cguagguuggggccucgcaagaggugcacaaucgaccgugaguaagagca
    uagcuguugggaguuccugccgaaguagaguuaaggugccggaauacacg
    cucaucagaggcgcucaagcguguuaccuauacucuaccgucaggguuga
    uaugaugcccugacgaguaggcaggcguggaggucagugacgaagccuag
    accguaaggucgggucgaacggccucuagugcagaucuuggug
    ..........................<<<<<<....>>>>>.>...<...
    ..<<....>>..<<<<<......<<.....>>.....>>>>>..<<<..<
    ........<<.<<<<<.>>>>>.>>........>....<<<<<<<.<<..
    ...>>>>>>>>>........<<<<<<<...>>>>>>>.....<<<<<<..
    ....>>>>>>..>>>....>............<<<<....>>>>......
    ...............<<<<<.<<<<<<..<..<<<<.>>>>.><<<<<<<
    .<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<<<......>>>
    >>.......>>>>>>>.>.>.>>>>>.>>>>>>>>>>........<<<..
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    ><<<<<<<...<<<<<<.<<<<<<..<<<<.<<<<<.....>>>>>.>>>
    >...<<<<<..<<<<<....>>>>>...>>>>>.<<.....>>....>>>
    >>>.>>>>>>..<<.<<<<<<...<<<<<<<..<<<<(((.....<<<<<
    <.....<<.))).>>...>>>>>>.>>>>..>>>>>>><<<<<<<<<...
    ......>>>>>>>>>....>>>>>>..<<<<<<<<.<<......<<<<.<
    <<<....>>>>>>>>...>>>>>>>>>>..>>...>>>>>>>.
    ? GO:0002181 ... P05748 37037974
    11 8e5t:O
    (4.0)
    BS01 >8e5t:1
    guuugaccucaaaucagguaggaguacccgcugaaaagcggaggaaaaga
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    ..........................<<<<<<....>>>>>.>...<...
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    ...............<<<<<.<<<<<<..<..<<<<.>>>>.><<<<<<<
    .<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<<<......>>>
    >>.......>>>>>>>.>.>.>>>>>.>>>>>>>>>>........<<<..
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    >>>.>>>>>>..<<.<<<<<<...<<<<<<<..<<<<(((.....<<<<<
    <.....<<.))).>>...>>>>>>.>>>>..>>>>>>><<<<<<<<<...
    ......>>>>>>>>>....>>>>>>..<<<<<<<<.<<......<<<<.<
    <<<....>>>>>>>>...>>>>>>>>>>..>>...>>>>>>>.
    ? GO:0000470 ... P26784 37037974
    12 8e5t:Q
    (4.0)
    BS01 >8e5t:1
    guuugaccucaaaucagguaggaguacccgcugaaaagcggaggaaaaga
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    ..........................<<<<<<....>>>>>.>...<...
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    ...............<<<<<.<<<<<<..<..<<<<.>>>>.><<<<<<<
    .<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<<<......>>>
    >>.......>>>>>>>.>.>.>>>>>.>>>>>>>>>>........<<<..
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    >>>.>>>>>>..<<.<<<<<<...<<<<<<<..<<<<(((.....<<<<<
    <.....<<.))).>>...>>>>>>.>>>>..>>>>>>><<<<<<<<<...
    ......>>>>>>>>>....>>>>>>..<<<<<<<<.<<......<<<<.<
    <<<....>>>>>>>>...>>>>>>>>>>..>>...>>>>>>>.
    ? GO:0002181 ... P0CX49 37037974
    13 8e5t:S
    (4.0)
    BS01 >8e5t:1
    guuugaccucaaaucagguaggaguacccgcugaaaagcggaggaaaaga
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    ..........................<<<<<<....>>>>>.>...<...
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    ....>>>>>>..>>>....>............<<<<....>>>>......
    ...............<<<<<.<<<<<<..<..<<<<.>>>>.><<<<<<<
    .<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<<<......>>>
    >>.......>>>>>>>.>.>.>>>>>.>>>>>>>>>>........<<<..
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    >>>.>>>>>>..<<.<<<<<<...<<<<<<<..<<<<(((.....<<<<<
    <.....<<.))).>>...>>>>>>.>>>>..>>>>>>><<<<<<<<<...
    ......>>>>>>>>>....>>>>>>..<<<<<<<<.<<......<<<<.<
    <<<....>>>>>>>>...>>>>>>>>>>..>>...>>>>>>>.
    ? GO:0002181 ... P0CX23 37037974
    14 8e5t:b
    (4.0)
    BS01 >8e5t:1
    guuugaccucaaaucagguaggaguacccgcugaaaagcggaggaaaaga
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    ..........................<<<<<<....>>>>>.>...<...
    ..<<....>>..<<<<<......<<.....>>.....>>>>>..<<<..<
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    ....>>>>>>..>>>....>............<<<<....>>>>......
    ...............<<<<<.<<<<<<..<..<<<<.>>>>.><<<<<<<
    .<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<<<......>>>
    >>.......>>>>>>>.>.>.>>>>>.>>>>>>>>>>........<<<..
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    >>>.>>>>>>..<<.<<<<<<...<<<<<<<..<<<<(((.....<<<<<
    <.....<<.))).>>...>>>>>>.>>>>..>>>>>>><<<<<<<<<...
    ......>>>>>>>>>....>>>>>>..<<<<<<<<.<<......<<<<.<
    <<<....>>>>>>>>...>>>>>>>>>>..>>...>>>>>>>.
    ? GO:0000027 ... Q08235 37037974
    15 8e5t:e
    (4.0)
    BS01 >8e5t:1
    guuugaccucaaaucagguaggaguacccgcugaaaagcggaggaaaaga
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    ..........................<<<<<<....>>>>>.>...<...
    ..<<....>>..<<<<<......<<.....>>.....>>>>>..<<<..<
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    ...>>>>>>>>>........<<<<<<<...>>>>>>>.....<<<<<<..
    ....>>>>>>..>>>....>............<<<<....>>>>......
    ...............<<<<<.<<<<<<..<..<<<<.>>>>.><<<<<<<
    .<<<<<<<<<<<<<<<.....<<<<<<<<<......<<<<<......>>>
    >>.......>>>>>>>.>.>.>>>>>.>>>>>>>>>>........<<<..
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    >>>.>>>>>>..<<.<<<<<<...<<<<<<<..<<<<(((.....<<<<<
    <.....<<.))).>>...>>>>>>.>>>>..>>>>>>><<<<<<<<<...
    ......>>>>>>>>>....>>>>>>..<<<<<<<<.<<......<<<<.<
    <<<....>>>>>>>>...>>>>>>>>>>..>>...>>>>>>>.
    ? GO:0002181 ... P38061 37037974
    16 8e5t:f
    (4.0)
    BS01 >8e5t:1
    guuugaccucaaaucagguaggaguacccgcugaaaagcggaggaaaaga
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    ..........................<<<<<<....>>>>>.>...<...
    ..<<....>>..<<<<<......<<.....>>.....>>>>>..<<<..<
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    ? GO:0000027 ... P05744 37037974
    17 8e5t:i
    (4.0)
    BS01 >8e5t:1
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    ? GO:0002181 ... P05745 37037974
    18 8e5t:p
    (4.0)
    BS01 >8e5t:1
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    3.6.4.13 GO:0000462 ... Q03532 37037974
    19 8e5t:s
    (4.0)
    BS01 >8e5t:1
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    ? GO:0000463 ... Q04660 37037974
    20 8e5t:z
    (4.0)
    BS01 >8e5t:1
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    ..........................<<<<<<....>>>>>.>...<...
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    <.....<<.))).>>...>>>>>>.>>>>..>>>>>>><<<<<<<<<...
    ......>>>>>>>>>....>>>>>>..<<<<<<<<.<<......<<<<.<
    <<<....>>>>>>>>...>>>>>>>>>>..>>...>>>>>>>.
    ? GO:0003674 ... P35178 37037974

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218