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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 30 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • The sequence is converted from residues with experimentally determined coordinates in the structure; residues not observed in the 3D structure are excluded.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (resolution)     		Site
    #     		RNA
    sequence         		EC
    number     		GO
    terms     		UniProt PubMed Binding
    affinity
    1 4v9f:1
    (2.404)    		 BS01 >4v9f:0
    acuaugccagcugguggauugcucggcucaggcgcugaugaaggacgugc
caagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagau
uuccgaaugagaaucucucuaacaauugcuucgcgcaaugaggaaccccg
agaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugu
cguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacg
ggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaag
ucucuuggaauagagcgugauacagggugacaaccccguacugaagacca
guacgcugugcgguagugccagaguagcggggguuggauaucccucgcga
auaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagu
gaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcga
aauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucc
cuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccg
auguucugucguacguuuugaaaaacgagccagggagugugucuguaugg
caagucuaaccggaguauccggggaggcacagggaaaccgacauggccgc
agggcuuugcccgagggccgccgucuucaagggcggggagccauguggac
acgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaa
aggcacguggaagucuguuagaguugguguccuacaauacccucucguga
ucuauguguaggggugaaaggcccaucgaguccggcaacagcugguucca
aucgaaacaugucgaagcaugaccuccgccgagguagucugugagguaga
gcgaccgauugguguccuccugucaaacuccaaacuuacagacgcuguuu
gacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaac
aacccagagauagguuaagguccccaaguguggauuaaguguaauccucu
gaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcu
acccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgccca
aaaugaucgggacucaaauccaccaccgagaccuguccguaccacucaua
cugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgaga
gcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgau
agucgggugagaaccccgacggccuaauggauaaggguuccucagcacug
cugaucagcugaggguuagccgguccuaagucucaccgcaacucgacuga
gacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaagu
ugacgcccuggggucgaucacgccgggcauucgcccggucgaaccgucca
acuccguggaagccguaauggcaggaagcggacgaacggcggcauaggga
aacgugauucaaccuggggcccaugaaaagacgagcaugauguccguacc
gagaaccgacacagguguccauggcggcgaaagccaaggccugucgggag
caaccaacguuagggaauucggcaaguuagucccguaccuucggaagaag
ggaugccugcuccggaacggagcaggucgcagugacucggaagcucggac
ugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacgguc
acugaauccugcccagugcagguaucugaacaccucguacaagaggacga
aggaccugucaacggcggggguuaugacccucuuaagguagcguaguacc
uugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacug
ucccaacguugggcccggugaacuguacauuccagugcggagucuggaga
cacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcu
gagacguggucgccgaucggugacugcgacucucacuccgggaggaggac
accgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauauc
gagcgcgcccuauggucaucucagccgggacagagacccggcgaagagug
caagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugac
gcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauug
augacagaaaagcuacccuagggauaacagagucgucacucgcaagagca
cauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugc
ccgugcagaagcgggcaagggugagguuguucgccuauuaaaggaggucg
ugagcuggguuuagaccgucgugagacaggucggcugcuaucuacugggu
guguaauggugucugacaagaacgaccguauaguacgagaggaacuacgg
uugguggccacugguguaccgguuguucgagagagcacgugccggguagc
cacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuug
gaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacuc
ggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacag
accaaagc
....<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.(
(..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>..
.>>>....<<<...>>>.......<<<<<.....>>>>>.>>...<<<<<
<.....<......>......>>>>>.>.........<<.....>>...<<
<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>
>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<.....
.<<<<......>>>>.((......<<<.....))>>>....>>>>>>>..
....>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>..
....<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))......
.........<<....>>....))..........<<<.....>>>......
.............>>>>>>>>>>>.......<<<<<<<<<<....<.<<<
<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.
>>>>>>>>>>...<<<........>>>.<<<<<<...<<<<<<<<<<<<<
<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<..
.<<<<...>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>
>>>.<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<...
.>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....
>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<
<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<
<.....<<..<<......>>..>>...>>.>...>>>>>>>>>>>>....
...>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<....
..>>>...<<<<<<<...<<<(((.....<<<<<<.....<<........
...<<<.<<<<<<<<<<.......<<<<<.<<<..<<<<.......>>>>
..>>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..
........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<......
.>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....
>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<.......
.<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<
.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>
>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<
<...<<<<<<<<...<<<<<<<<<<<<<.(((>>>>>>><...<<<<<..
..<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>...
...>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>
.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<..
...<<<<<<<<.<<.........<.....<<<<<...............>
>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..
<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>
>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>....
.>>>>>>>>..>>>>><<<<<<....>>>>>>........<.........
..<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>.
.>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.
<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..
<<<.<<<<<<<<<<<..>>>>>>>>>>>.>>>...<<<<....>>>>...
..>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........
>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.
..(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<
<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>
..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<...
....>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<
<<<<......>>>>>>..>>>..<<<<.....>>>>......>>>>>...
...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>
>.....<<<<<<<...<<<<..<<<<<<<<...............>>>>>
>>><<<<<...<<<<...<<<<<<<<<<))).>>>>>...>>>>>...>>
>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>
.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>
>>>.....
    		 ? GO:0003723 ... P32410 23695244
    2 4v9f:2
    (2.404)    		 BS01 >4v9f:0
    acuaugccagcugguggauugcucggcucaggcgcugaugaaggacgugc
caagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagau
uuccgaaugagaaucucucuaacaauugcuucgcgcaaugaggaaccccg
agaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugu
cguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacg
ggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaag
ucucuuggaauagagcgugauacagggugacaaccccguacugaagacca
guacgcugugcgguagugccagaguagcggggguuggauaucccucgcga
auaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagu
gaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcga
aauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucc
cuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccg
auguucugucguacguuuugaaaaacgagccagggagugugucuguaugg
caagucuaaccggaguauccggggaggcacagggaaaccgacauggccgc
agggcuuugcccgagggccgccgucuucaagggcggggagccauguggac
acgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaa
aggcacguggaagucuguuagaguugguguccuacaauacccucucguga
ucuauguguaggggugaaaggcccaucgaguccggcaacagcugguucca
aucgaaacaugucgaagcaugaccuccgccgagguagucugugagguaga
gcgaccgauugguguccuccugucaaacuccaaacuuacagacgcuguuu
gacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaac
aacccagagauagguuaagguccccaaguguggauuaaguguaauccucu
gaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcu
acccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgccca
aaaugaucgggacucaaauccaccaccgagaccuguccguaccacucaua
cugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgaga
gcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgau
agucgggugagaaccccgacggccuaauggauaaggguuccucagcacug
cugaucagcugaggguuagccgguccuaagucucaccgcaacucgacuga
gacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaagu
ugacgcccuggggucgaucacgccgggcauucgcccggucgaaccgucca
acuccguggaagccguaauggcaggaagcggacgaacggcggcauaggga
aacgugauucaaccuggggcccaugaaaagacgagcaugauguccguacc
gagaaccgacacagguguccauggcggcgaaagccaaggccugucgggag
caaccaacguuagggaauucggcaaguuagucccguaccuucggaagaag
ggaugccugcuccggaacggagcaggucgcagugacucggaagcucggac
ugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacgguc
acugaauccugcccagugcagguaucugaacaccucguacaagaggacga
aggaccugucaacggcggggguuaugacccucuuaagguagcguaguacc
uugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacug
ucccaacguugggcccggugaacuguacauuccagugcggagucuggaga
cacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcu
gagacguggucgccgaucggugacugcgacucucacuccgggaggaggac
accgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauauc
gagcgcgcccuauggucaucucagccgggacagagacccggcgaagagug
caagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugac
gcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauug
augacagaaaagcuacccuagggauaacagagucgucacucgcaagagca
cauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugc
ccgugcagaagcgggcaagggugagguuguucgccuauuaaaggaggucg
ugagcuggguuuagaccgucgugagacaggucggcugcuaucuacugggu
guguaauggugucugacaagaacgaccguauaguacgagaggaacuacgg
uugguggccacugguguaccgguuguucgagagagcacgugccggguagc
cacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuug
gaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacuc
ggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacag
accaaagc
....<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.(
(..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>..
.>>>....<<<...>>>.......<<<<<.....>>>>>.>>...<<<<<
<.....<......>......>>>>>.>.........<<.....>>...<<
<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>
>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<.....
.<<<<......>>>>.((......<<<.....))>>>....>>>>>>>..
....>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>..
....<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))......
.........<<....>>....))..........<<<.....>>>......
.............>>>>>>>>>>>.......<<<<<<<<<<....<.<<<
<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.
>>>>>>>>>>...<<<........>>>.<<<<<<...<<<<<<<<<<<<<
<..<<<...<<<<<...>>>>>...>>>...<<....>>....<<<<<..
.<<<<...>>>>...>>>>><<<<<<....>>>>>>...>>>>>>>>>>>
>>>.<<.<...<<<<<<.....<<<<<<<<<..<<<....<<<<<<<...
.>>>>>>>.....>>>....<<<..<<.<<........>>>>.>>>....
>>>>>>>>>...<<<.....>>>......>>>>>>......>.>>..<<<
<<<....<<<<<....>>>>><.<<<<<<...<<<.<<<<<<<<<...<<
<.....<<..<<......>>..>>...>>.>...>>>>>>>>>>>>....
...>>>>>>..>..<<<<<<.<<<.....>>>.>>>>>>....<<<....
..>>>...<<<<<<<...<<<(((.....<<<<<<.....<<........
...<<<.<<<<<<<<<<.......<<<<<.<<<..<<<<.......>>>>
..>>>.......<<<<......>>>>.>>>>>...>>>>>>>>>>>>>..
........)))>>....>>>>>>.>>>...>>>>>>><<<<<<<......
.>>>>>..>>....>>>>>><...<<<<<<<<......<<<<<<<<....
>>>>>>>>...>>>>>>>>....>.....>>>>>><<.....<.......
.<<<<<<.......>>>>>><<<<<...<<<<..<<...<<<<<<...<<
.....>>.>>>>>>....((<<<<<<...<<<<<<.<<.....>>..>>>
>>>.....>>>..<<<<<........>>>>>))<<<<<<<<.......<<
<...<<<<<<<<...<<<<<<<<<<<<<.(((>>>>>>><...<<<<<..
..<<<<<....<<<<...>>>>.....>>>>>.....>>>>>....>...
...>>>>>>...>>>>>>>>.........>>>..>>>>>>>>.>>>..>>
.....<<......>>.>>>>..<<<.......>>>.>>>>>...<<<<..
...<<<<<<<<.<<.........<.....<<<<<...............>
>>>><<<<<<<<<.....>>>>>>>>>............<<<<<<<<<..
<<<.........>>>..<<<<<<<.....<<<....>>>.......>>>>
>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>....
.>>>>>>>>..>>>>><<<<<<....>>>>>>........<.........
..<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>.
.>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.
<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..
<<<.<<<<<<<<<<<..>>>>>>>>>>>.>>>...<<<<....>>>>...
..>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........
>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.
..(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<
<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>
..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<...
....>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<
<<<<......>>>>>>..>>>..<<<<.....>>>>......>>>>>...
...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>
>.....<<<<<<<...<<<<..<<<<<<<<...............>>>>>
>>><<<<<...<<<<...<<<<<<<<<<))).>>>>>...>>>>>...>>
>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>
.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>
>>>.....
    		 ? GO:0003735 ... P22452 23695244
    3 4v9f:3
    (2.404)    		 BS01 >4v9f:0
    acuaugccagcugguggauugcucggcucaggcgcugaugaaggacgugc
caagcugcgauaagcuguggggagccgcacggaggcgaagaaccacagau
uuccgaaugagaaucucucuaacaauugcuucgcgcaaugaggaaccccg
agaacugaaacaucucaguaucgggaggaacagaaaacgcaacgugaugu
cguuaguaaccgcgagugaacgcgauacagcccaaaccgaagcccucacg
ggcaauguggugucagggcuaccucucaucagccgaccgucuucacgaag
ucucuuggaauagagcgugauacagggugacaaccccguacugaagacca
guacgcugugcgguagugccagaguagcggggguuggauaucccucgcga
auaacgcaggcaucgacugcgaaggcuaaacacaaccugagaccgauagu
gaacaaguagugugaacgaacgcugcaaaguacccucagaagggaggcga
aauagagcaugaaaucaguuggcgaucgagcgacagggcauacaaggucc
cuugacgaaugaccgagacgcgagucuccaguaagacucacgggaagccg
auguucugucguacguuuugaaaaacgagccagggagugugucuguaugg
caagucuaaccggaguauccggggaggcacagggaaaccgacauggccgc
agggcuuugcccgagggccgccgucuucaagggcggggagccauguggac
acgacccgaauccggacgaucuacgcauggacaagaugaagcgugccgaa
aggcacguggaagucuguuagaguugguguccuacaauacccucucguga
ucuauguguaggggugaaaggcccaucgaguccggcaacagcugguucca
aucgaaacaugucgaagcaugaccuccgccgagguagucugugagguaga
gcgaccgauugguguccuccugucaaacuccaaacuuacagacgcuguuu
gacgcggggauuccggugcgcgggguaagccuguguaccaggaggggaac
aacccagagauagguuaagguccccaaguguggauuaaguguaauccucu
gaagguggucucgagcccuagacagccgggaggugagcuuagaagcagcu
acccucuaagaaaagcguaacagcuuaccggccgagguuugaggcgccca
aaaugaucgggacucaaauccaccaccgagaccuguccguaccacucaua
cugguaaucgaguagauuggcgcucuaauuggauggaagcaggggcgaga
gcuccuguggaccgauuagugacgaaaauccuggccauaguagcagcgau
agucgggugagaaccccgacggccuaauggauaaggguuccucagcacug
cugaucagcugaggguuagccgguccuaagucucaccgcaacucgacuga
gacgaaaugggaaacagguuaauauuccugugccaucaugcagugaaagu
ugacgcccuggggucgaucacgccgggcauucgcccggucgaaccgucca
acuccguggaagccguaauggcaggaagcggacgaacggcggcauaggga
aacgugauucaaccuggggcccaugaaaagacgagcaugauguccguacc
gagaaccgacacagguguccauggcggcgaaagccaaggccugucgggag
caaccaacguuagggaauucggcaaguuagucccguaccuucggaagaag
ggaugccugcuccggaacggagcaggucgcagugacucggaagcucggac
ugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacgguc
acugaauccugcccagugcagguaucugaacaccucguacaagaggacga
aggaccugucaacggcggggguuaugacccucuuaagguagcguaguacc
uugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacug
ucccaacguugggcccggugaacuguacauuccagugcggagucuggaga
cacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcu
gagacguggucgccgaucggugacugcgacucucacuccgggaggaggac
accgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauauc
gagcgcgcccuauggucaucucagccgggacagagacccggcgaagagug
caagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugac
gcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauug
augacagaaaagcuacccuagggauaacagagucgucacucgcaagagca
cauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugc
ccgugcagaagcgggcaagggugagguuguucgccuauuaaaggaggucg
ugagcuggguuuagaccgucgugagacaggucggcugcuaucuacugggu
guguaauggugucugacaagaacgaccguauaguacgagaggaacuacgg
uugguggccacugguguaccgguuguucgagagagcacgugccggguagc
cacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuug
gaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacuc
ggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacag
accaaagc
....<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.(
(..((.>>>.....<<<<<<...<<<))..)).>>>......>>>>>>..
.>>>....<<<...>>>.......<<<<<.....>>>>>.>>...<<<<<
<.....<......>......>>>>>.>.........<<.....>>...<<
<<<.....<<.....>>....>>>>>...<<<...<<<...<<<<....>
>>>.....>>>....<<<<<<<<......<<<<.....<<<<<<<.....
.<<<<......>>>>.((......<<<.....))>>>....>>>>>>>..
....>>>>...>>>>>>.>>......<<<<<<<........>>>>>>>..
....<<<<<.<<<<<<>>>>>..>>>......]..>>>>>>.))......
.........<<....>>....))..........<<<.....>>>......
.............>>>>>>>>>>>.......<<<<<<<<<<....<.<<<
<.<<<.........<<<<<....>>>>>.........>>>.>>>>...>.
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.>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.
<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..
<<<.<<<<<<<<<<<..>>>>>>>>>>>.>>>...<<<<....>>>>...
..>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........
>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.
..(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<
<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>
..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<...
....>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<
<<<<......>>>>>>..>>>..<<<<.....>>>>......>>>>>...
...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>
>.....<<<<<<<...<<<<..<<<<<<<<...............>>>>>
>>><<<<<...<<<<...<<<<<<<<<<))).>>>>>...>>>>>...>>
>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>
.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>
>>>.....
    		 ? GO:0000049 ... P32411 23695244
    4 4v9f:6
    (2.404)    		 BS01 >4v9f:0
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.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>
>>>.....
    		 ? GO:0003735 ... P14125 23695244
    5 4v9f:A
    (2.404)    		 BS01 >4v9f:0
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.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>
>>>.....
    		 ? GO:0002181 ... P20276 23695244
    6 4v9f:B
    (2.404)    		 BS01 >4v9f:0
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..>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........
>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.
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..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<...
....>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<
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>.....<<<<<<<...<<<<..<<<<<<<<...............>>>>>
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.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>
>>>.....
    		 ? GO:0003723 ... P20279 23695244
    7 4v9f:C
    (2.404)    		 BS01 >4v9f:0
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.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
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>>>.....
    		 ? GO:0003723 ... P12735 23695244
    8 4v9f:D
    (2.404)    		 BS01 >4v9f:0
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.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
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>>>.....
    		 ? GO:0000049 ... P14124 23695244
    9 4v9f:E
    (2.404)    		 BS01 >4v9f:0
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>>>>>>>>>>...<<<........>>>.<<<<<<...<<<<<<<<<<<<<
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>>>.<<<<<.<<<..<<<<<<<..<<<.....<<<<......>>>>....
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..<<<<<.......>>>>>.....>....>>>>>..>>.>>>>>>>..>.
.>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.
<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..
<<<.<<<<<<<<<<<..>>>>>>>>>>>.>>>...<<<<....>>>>...
..>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........
>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.
..(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<
<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>
..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<...
....>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<
<<<<......>>>>>>..>>>..<<<<.....>>>>......>>>>>...
...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>
>.....<<<<<<<...<<<<..<<<<<<<<...............>>>>>
>>><<<<<...<<<<...<<<<<<<<<<))).>>>>>...>>>>>...>>
>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>
.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>
>>>.....
    		 ? GO:0002181 ... P14135 23695244
    10 4v9f:F
    (2.404)    		 BS01 >4v9f:0
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..(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<
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..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<...
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.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>
>>>.....
    		 ? GO:0001682 ... P12743 23695244
    11 4v9f:G
    (2.404)    		 BS01 >4v9f:0
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>>>.....
    		 ? N/A P15825 23695244
    12 4v9f:H
    (2.404)    		 BS01 >4v9f:0
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..>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........
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..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<...
....>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<
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.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>
>>>.....
    		 ? GO:0000027 ... P60617 23695244
    13 4v9f:I
    (2.404)    		 BS01 >4v9f:0
    acuaugccagcugguggauugcucggcucaggcgcugaugaaggacgugc
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....<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.(
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.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>
>>>.....
    		 ? GO:0003735 ... P14122 23695244
    14 4v9f:J
    (2.404)    		 BS01 >4v9f:0
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..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<...
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.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>
>>>.....
    		 ? GO:0003729 ... P29198 23695244
    15 4v9f:K
    (2.404)    		 BS01 >4v9f:0
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....<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.(
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..>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........
>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.
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..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<...
....>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<
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...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>
>.....<<<<<<<...<<<<..<<<<<<<<...............>>>>>
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>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>
.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>
>>>.....
    		 ? GO:0003735 ... P22450 23695244
    16 4v9f:L
    (2.404)    		 BS01 >4v9f:0
    acuaugccagcugguggauugcucggcucaggcgcugaugaaggacgugc
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....<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.(
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.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>
>>>.....
    		 ? GO:0003735 ... P12737 23695244
    17 4v9f:M
    (2.404)    		 BS01 >4v9f:0
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....<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.(
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..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<...
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.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>
>>>.....
    		 ? GO:0002181 ... P60618 23695244
    18 4v9f:N
    (2.404)    		 BS01 >4v9f:0
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....<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.(
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..>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........
>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.
..(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<
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..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<...
....>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<
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...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>
>.....<<<<<<<...<<<<..<<<<<<<<...............>>>>>
>>><<<<<...<<<<...<<<<<<<<<<))).>>>>>...>>>>>...>>
>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>
.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>
>>>.....
    		 ? GO:0000027 ... P14123 23695244
    19 4v9f:O
    (2.404)    		 BS01 >4v9f:0
    acuaugccagcugguggauugcucggcucaggcgcugaugaaggacgugc
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....<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.(
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..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<...
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.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>
>>>.....
    		 ? GO:0003723 ... P12733 23695244
    20 4v9f:P
    (2.404)    		 BS01 >4v9f:0
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....<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.(
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..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<...
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.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>
>>>.....
    		 ? GO:0003723 ... P14119 23695244
    21 4v9f:Q
    (2.404)    		 BS01 >4v9f:0
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....<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.(
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.>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.
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..>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........
>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.
..(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<
<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>
..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<...
....>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<
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...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>
>.....<<<<<<<...<<<<..<<<<<<<<...............>>>>>
>>><<<<<...<<<<...<<<<<<<<<<))).>>>>>...>>>>>...>>
>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>
.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>
>>>.....
    		 ? GO:0003735 ... P12734 23695244
    22 4v9f:R
    (2.404)    		 BS01 >4v9f:0
    acuaugccagcugguggauugcucggcucaggcgcugaugaaggacgugc
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....<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.(
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..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<...
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.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>
>>>.....
    		 ? GO:0002181 ... P10970 23695244
    23 4v9f:S
    (2.404)    		 BS01 >4v9f:0
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....<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.(
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..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<...
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.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>
>>>.....
    		 ? GO:0000027 ... P12732 23695244
    24 4v9f:T
    (2.404)    		 BS01 >4v9f:0
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....<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.(
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..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<...
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.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>
>>>.....
    		 ? GO:0002181 ... P10972 23695244
    25 4v9f:U
    (2.404)    		 BS01 >4v9f:0
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....<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.(
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.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>
>>>.....
    		 ? GO:0003735 ... P14116 23695244
    26 4v9f:V
    (2.404)    		 BS01 >4v9f:0
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.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
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>>>.....
    		 ? GO:0003735 ... P10971 23695244
    27 4v9f:W
    (2.404)    		 BS01 >4v9f:0
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....<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.(
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.>>.>>>>>>>>.>>>>.>....>>.((.<<<<<<......))>>>>>>.
<<<<<<<..(((.[[......<<<<.[[<<<<..<<<<<.<<<<<<<<..
<<<.<<<<<<<<<<<..>>>>>>>>>>>.>>>...<<<<....>>>>...
..>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<...........
>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<.
..(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<
<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>
..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<...
....>>...>>>>>>...>>>>.>.......<<<<<..<<<<<..<<<<<
<<<<......>>>>>>..>>>..<<<<.....>>>>......>>>>>...
...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>
>.....<<<<<<<...<<<<..<<<<<<<<...............>>>>>
>>><<<<<...<<<<...<<<<<<<<<<))).>>>>>...>>>>>...>>
>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>
.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>
>>>.....
    		 ? GO:0000463 ... P14121 23695244
    28 4v9f:X
    (2.404)    		 BS01 >4v9f:0
    acuaugccagcugguggauugcucggcucaggcgcugaugaaggacgugc
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....<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.(
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..(((>>....>>>>>>>...<<<<<<<<<.........>>>>>>>>>.<
<<....>>>.>>))).......<<<<<.<<<<<.>>>>>>>>>>>>>>>>
..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<...
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...>>>.>>....<<<<<<<....>>>.>>>>....]]..))).>>>>>>
>.....<<<<<<<...<<<<..<<<<<<<<...............>>>>>
>>><<<<<...<<<<...<<<<<<<<<<))).>>>>>...>>>>>...>>
>>.>>>>>..<<<....<<<<<...........>>>>>....>>>.>>>>
.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>
>>>.....
    		 ? GO:0002181 ... P18138 23695244
    29 4v9f:Y
    (2.404)    		 BS01 >4v9f:0
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....<<<<<<<<<<<.....((..((<<<<<<.[<<......<<<<<<.(
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..........>>>>..]]>>>>.......<<<<.<.<<<<<<...<<...
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.......>>>>>>>....<<<<<<<<<.......>>>>>....<<<.<<<
<<<<<....<<<<<..........>>>>>...>>>>.>>>>..>>>...>
>>>.....
    		 ? GO:0000166 ... P12736 23695244
    30 4v9f:Z
    (2.404)    		 BS01 >4v9f:0
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acuccguggaagccguaauggcaggaagcggacgaacggcggcauaggga
aacgugauucaaccuggggcccaugaaaagacgagcaugauguccguacc
gagaaccgacacagguguccauggcggcgaaagccaaggccugucgggag
caaccaacguuagggaauucggcaaguuagucccguaccuucggaagaag
ggaugccugcuccggaacggagcaggucgcagugacucggaagcucggac
ugucuaguaacaacauaggugaccgcaaauccgcaaggacucguacgguc
acugaauccugcccagugcagguaucugaacaccucguacaagaggacga
aggaccugucaacggcggggguuaugacccucuuaagguagcguaguacc
uugccgcaucaguagcggcuugcaugaauggauuaaccagagcuucacug
ucccaacguugggcccggugaacuguacauuccagugcggagucuggaga
cacccagggggaagcgaagacccuauggagcuuuacugcaggcugucgcu
gagacguggucgccgaucggugacugcgacucucacuccgggaggaggac
accgauagccgggcaguuugacuggggcgguacgcgcucgaaaagauauc
gagcgcgcccuauggucaucucagccgggacagagacccggcgaagagug
caagagcaaaagaugacuugacaguguucuucccaacgaggaacgcugac
gcgaaagcguggucuagcgaaccaauuagccugcuugaugcgggcaauug
augacagaaaagcuacccuagggauaacagagucgucacucgcaagagca
cauaucgaccgaguggcuugcuaccucgaugucgguucccuccauccugc
ccgugcagaagcgggcaagggugagguuguucgccuauuaaaggaggucg
ugagcuggguuuagaccgucgugagacaggucggcugcuaucuacugggu
guguaauggugucugacaagaacgaccguauaguacgagaggaacuacgg
uugguggccacugguguaccgguuguucgagagagcacgugccggguagc
cacgccacacgggguaagagcugaacgcaucuaagcucgaaacccacuug
gaaaagagacaccgccgaggucccgcguacaagacgcggucgauagacuc
ggggugugcgcgucgagguaacgagacguuaagcccacgagcacuaacag
accaaagc
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>>>.....
    		 ? GO:0003735 ... P60619 23695244
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218