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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM DMFold SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    19201 5km2:A (1.25) BS01 C5P 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 28968488 PDBbind: -logKd/Ki=4.41, Kd=39.1uM
    19202 5km3:A (1.2) BS01 U5P 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 28968488 PDBbind: -logKd/Ki=4.60, Kd=24.9uM
    19203 5km5:B (2.1) BS01 TR5 3.9.1.- GO:0003824 ... Q9BX68 28968488 PDBbind: -logKd/Ki=6.92, Kd=0.121uM
    19204 5km9:B (1.45) BS01 ADN 3.9.1.- GO:0003824 ... Q9BX68 28968488 PDBbind: -logKd/Ki=4.25, Kd=55.9uM
    19205 5kma:A (1.55) BS01 777 3.4.22.-
    3.9.1.-
    GO:0000118 ... P49773 28968488 PDBbind: -logKd/Ki=4.71, Kd=19.6uM
    19206 5kmf:A (3.2) BS01 6U9 ? GO:0001518 ... A8EVM5 27556947 PDBbind: -logKd/Ki=6.29, IC50=508nM
    19207 5knj:A (2.88) BS01 6UX ? GO:0004672 ... Q8NB16 27832137 PDBbind: -logKd/Ki=6.94, Kd=116nM
    BindingDB: Kd=9300nM
    19208 5knr:A (2.864) BS01 3L5 2.4.2.8 GO:0000166 ... P0A9M2 N/A PDBbind: -logKd/Ki=5.85, Ki=1.4uM
    19209 5kns:A (2.792) BS01 3L7 2.4.2.8 GO:0000166 ... P0A9M2 N/A PDBbind: -logKd/Ki=6.12, Ki=0.75uM
    19210 5kns:B (2.792) BS01 3L7 2.4.2.8 GO:0000166 ... P0A9M2 N/A PDBbind: -logKd/Ki=6.12, Ki=0.75uM
    19211 5knt:A (2.55) BS01 6WB 2.4.2.8 GO:0000166 ... P0A9M2 N/A PDBbind: -logKd/Ki=4.43, Ki=37uM
    19212 5knu:A (2.808) BS01 6WA 2.4.2.8 GO:0000166 ... P0A9M2 N/A PDBbind: -logKd/Ki=5.55, Ki=2.8uM
    19213 5knu:B (2.808) BS01 6WA 2.4.2.8 GO:0000166 ... P0A9M2 N/A PDBbind: -logKd/Ki=5.55, Ki=2.8uM
    19214 5knv:A (2.861) BS01 6W9 2.4.2.8 GO:0000166 ... P0A9M2 N/A PDBbind: -logKd/Ki=4.87, Ki=13.4uM
    19215 5knv:B (2.861) BS01 6W9 2.4.2.8 GO:0000166 ... P0A9M2 N/A PDBbind: -logKd/Ki=4.87, Ki=13.4uM
    19216 5knx:A (2.4) BS01 6WC 2.4.2.8 GO:0000166 ... P0A9M2 N/A PDBbind: -logKd/Ki=6.10, Ki=0.8uM
    19217 5knx:B (2.4) BS01 6WC 2.4.2.8 GO:0000166 ... P0A9M2 N/A PDBbind: -logKd/Ki=6.10, Ki=0.8uM
    19218 5ko1:A (2.16) BS01 6UY ? GO:0004672 ... Q8NB16 27832137 MOAD: Kd=230nM
    PDBbind: -logKd/Ki=6.64, Kd=230nM
    BindingDB: Kd=230nM
    19219 5ko5:A (1.36) BS01 CYT 2.4.2.1 GO:0003824 ... A0A0U3AGT1 30192840 PDBbind: -logKd/Ki=4.57, Kd=27uM
    19220 5koq:A (2.7) BS01 6VR 3.4.23.15 GO:0004190 ... P00797 27687967 PDBbind: -logKd/Ki=9.24, IC50=0.58nM
    BindingDB: IC50=0.580000nM
    19221 5kos:A (2.41) BS01 6VS 3.4.23.15 GO:0004190 ... P00797 27774132 MOAD: ic50=1.5nM
    PDBbind: -logKd/Ki=8.82, IC50=1.5nM
    BindingDB: IC50=0.790000nM
    19222 5kpk:A (2.4) BS01 6VK 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 29515000 MOAD: ic50=0.005uM
    PDBbind: -logKd/Ki=8.30, IC50=0.005uM
    BindingDB: IC50=5nM
    19223 5kpl:A (2.6) BS01 6VL 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 29515000 PDBbind: -logKd/Ki=6.29, IC50=0.515uM
    BindingDB: IC50=515nM
    19224 5kpm:A (2.69) BS01 6VM 2.7.11.1
    2.7.11.26
    GO:0001837 ... P49841 29515000 PDBbind: -logKd/Ki=7.82, IC50=0.015uM
    19225 5kq5:A (3.41) BS01 STU 2.7.11.1
    2.7.11.26
    2.7.11.31
    GO:0004672 ... P54645 27490827 PDBbind: -logKd/Ki=8.05, Kd=9.0nM
    19226 5kqd:A (2.6) BS01 PKZ 2.7.1.33 GO:0004594 ... Q9H999 27555321 PDBbind: -logKd/Ki=6.30, IC50=0.5uM
    19227 5kqf:A (1.98) BS01 6WD 3.4.23.46 GO:0004190 ... P56817 27559936 MOAD: ic50=0.31uM
    PDBbind: -logKd/Ki=6.51, IC50=0.31uM
    BindingDB: IC50=310nM
    19228 5kqg:A (1.5) BS01 6VX 3.1.3.2
    3.1.3.48
    GO:0003993 ... P24666 27676368 MOAD: Ki=3.2uM
    PDBbind: -logKd/Ki=5.15, IC50=7.1uM
    19229 5kql:A (1.45) BS01 6VY 3.1.3.2
    3.1.3.48
    GO:0003993 ... P24666 27676368 PDBbind: -logKd/Ki=4.00, IC50>100uM
    19230 5kqx:A (2.4) BS01 ROC ? GO:0004190 ... C8BD48 27576689 MOAD: Ki=3.6nM
    PDBbind: -logKd/Ki=8.44, Ki=3.6nM
    19231 5kqx:B (2.4) BS01 ROC ? GO:0004190 ... C8BD48 27576689 PDBbind: -logKd/Ki=8.44, Ki=3.6nM
    19232 5kqy:A (1.65) BS01 017 ? GO:0004190 ... C8BD48 27576689 PDBbind: -logKd/Ki=9.29, Ki=0.51nM
    19233 5kqy:B (1.65) BS01 017 ? GO:0004190 ... C8BD48 27576689 MOAD: Ki=0.51nM
    PDBbind: -logKd/Ki=9.29, Ki=0.51nM
    19234 5kr0:A (1.8) BS01 478 ? GO:0004190 ... C8BD48 27576689 MOAD: Ki=0.71nM
    PDBbind: -logKd/Ki=9.15, Ki=0.71nM
    19235 5kr0:B (1.8) BS01 478 ? GO:0004190 ... C8BD48 27576689 PDBbind: -logKd/Ki=9.15, Ki=0.71nM
    19236 5kr1:A (1.6) BS01 017 ? GO:0004190 ... V5YAB1 27576689 PDBbind: -logKd/Ki=9.49, Ki=0.32nM
    19237 5kr1:B (1.6) BS01 017 ? GO:0004190 ... V5YAB1 27576689 MOAD: Ki=0.32nM
    PDBbind: -logKd/Ki=9.49, Ki=0.32nM
    19238 5kr2:A (1.78) BS01 ROC ? GO:0004190 ... V5YAB1 27576689 MOAD: Ki=3.3nM
    PDBbind: -logKd/Ki=8.48, Ki=3.3nM
    19239 5kr2:B (1.78) BS01 ROC ? GO:0004190 ... V5YAB1 27576689 PDBbind: -logKd/Ki=8.48, Ki=3.3nM
    19240 5kr8:A (2.118) BS01 6WE 3.4.23.46 GO:0004190 ... P56817 27559936 MOAD: ic50=150nM
    PDBbind: -logKd/Ki=6.82, IC50=0.15uM
    BindingDB: IC50=150nM
    19241 5krb:B (2.101) BS01 dna ? GO:0003700 ... Q64249 27984042 PDBbind: Kd=170nM
    19242 5krb:B (2.101) BS02 dna ? GO:0003700 ... Q64249 27984042 PDBbind: Kd=170nM
    19243 5krb:G (2.101) BS01 dna ? GO:0003700 ... Q64249 27984042 PDBbind: Kd=170nM
    19244 5krb:G (2.101) BS02 dna ? GO:0003700 ... Q64249 27984042 PDBbind: Kd=170nM
    19245 5kre:A (2.0) BS01 6WG 3.1.2.22 GO:0004622 ... Q5VWZ2 27391855 PDBbind: -logKd/Ki=7.23, IC50=0.059uM
    19246 5ks7:A (2.9) BS01 2BA 7.6.2.9 N/A Q9KHT9 27378384 PDBbind: -logKd/Ki=5.32, Kd=4.8uM
    19247 5ks7:B (2.9) BS01 2BA 7.6.2.9 N/A Q9KHT9 27378384 PDBbind: -logKd/Ki=5.32, Kd=4.8uM
    19248 5ksx:F (2.65) BS02 7AM 2.5.1.1
    2.5.1.10
    GO:0004659 ... P14324 28208018 PDBbind: -logKd/Ki=5.43, IC50=3.7uM
    BindingDB: IC50=3700nM
    19249 5ksx:F (2.65) BS03 7AM 2.5.1.1
    2.5.1.10
    GO:0004659 ... P14324 28208018 PDBbind: -logKd/Ki=5.43, IC50=3.7uM
    BindingDB: IC50=3700nM
    19250 5ktu:A (1.38) BS01 6XB 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q92793 27682507 PDBbind: -logKd/Ki=6.21, IC50=0.62uM
    BindingDB: IC50=620nM
    19251 5ktw:A (1.087) BS01 6XG 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q92793 27682507 PDBbind: -logKd/Ki=7.52, IC50=0.03uM
    BindingDB: IC50=20.0nM
    19252 5ktx:A (1.27) BS01 6XH 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q92793 27682507 PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    BindingDB: IC50=20nM, EC50=1900nM
    19253 5ku3:A (1.14) BS01 6XH ? N/A O60885 27682507 PDBbind: -logKd/Ki=4.89, IC50=13uM
    BindingDB: IC50=10510nM
    19254 5ku6:A (1.8) BS01 MZM 4.2.1.1 GO:0004089 ... P22748 28975383 PDBbind: -logKd/Ki=6.84, Kd=143nM
    BindingDB: Ki=6200nM, IC50=205nM
    19255 5ku9:A (2.2) BS01 6XJ 3.6.1.11 GO:0042981 ... P97287
    Q07820
    28197319 MOAD: ic50=1.49uM
    PDBbind: -logKd/Ki=5.83, IC50=1.49uM
    19256 5kup:A (1.389) BS01 6XL 2.7.10.2 GO:0004672 ... Q06187 27571029 MOAD: ic50=7.2nM
    PDBbind: -logKd/Ki=8.14, IC50=7.2nM
    19257 5kv8:A (1.949) BS02 6Y6 3.2.1.18 GO:0004308 ... G8G134 28674426 MOAD: ic50=14.5uM
    PDBbind: -logKd/Ki=4.84, IC50=14.5uM
    19258 5kv9:B (2.0) BS02 I57 3.2.1.18 GO:0004308 ... G8G134 28674426 MOAD: ic50=1.4uM
    PDBbind: -logKd/Ki=5.85, IC50=1.4uM
    19259 5kva:A (1.827) BS01 SAM 2.1.1.104 GO:0008168 ... C5Z4W3 27457122 MOAD: Kd=7.32uM
    PDBbind: -logKd/Ki=5.14, Kd=7.32uM
    19260 5kw2:A (2.76) BS01 6XQ 3.2.1.17 GO:0003796 ... O14842
    P00720
    29695780 PDBbind: -logKd/Ki=9.09, Ki=0.81nM
    19261 5kww:F (2.5) BS01 6YA ? GO:0019064 ... M1E1E4
    P03420
    28761099 MOAD: Kd=7.4nM
    PDBbind: -logKd/Ki=8.13, Kd=7.4nM
    19262 5kx7:B (2.8) BS01 6YD 2.7.11.1 GO:0000287 ... Q9NWZ3 27476420 PDBbind: -logKd/Ki=7.44, IC50=36nM
    BindingDB: IC50=36nM
    19263 5kx8:A (2.671) BS01 6YE 2.7.11.1 GO:0000287 ... Q9NWZ3 27476420 PDBbind: -logKd/Ki=7.42, IC50=38nM
    BindingDB: IC50=38nM
    19264 5kxc:A (1.8) BS01 6Y2 ? GO:0030246 ... A0A1D5B395 27601469 PDBbind: -logKd/Ki=5.26, Kd=5.45uM
    19265 5kxi:A (3.941) BS01 NCT ? GO:0004888 ... P43681 27698419 PDBbind: -logKd/Ki=7.74, Ki=18.2nM
    BindingDB: Ki=2nM, IC50=430nM, EC50=2400nM
    19266 5kxi:B (3.941) BS01 NCT ? GO:0004888 ... P17787 27698419 PDBbind: -logKd/Ki=7.74, Ki=18.2nM
    BindingDB: IC50=3.8nM, Ki=12.0nM, EC50=132000nM
    19267 5kya:A (2.598) BS01 6Y4 ? GO:0003677 ... P55055 27599745 PDBbind: -logKd/Ki=8.22, Ki=6nM
    BindingDB: EC50=46nM, Ki=6.0nM
    19268 5kyj:A (2.8) BS01 6Y8 ? GO:0003677 ... P55055 27599745 PDBbind: -logKd/Ki=7.89, Ki=13nM
    BindingDB: Ki=13nM, EC50=15nM
    19269 5kyk:A (2.702) BS01 6ZD 3.6.5.2 GO:0003924 ... P01116 28105276 PDBbind: -logKd/Ki=5.80, Ki=1.6uM
    19270 5kz0:A (2.3) BS01 6YL 2.7.10.1 GO:0004672 ... Q9UM73 24819116 MOAD: Ki=22nM
    PDBbind: -logKd/Ki=7.66, Ki=22nM
    BindingDB: Ki=22nM
    19271 5kzi:A (2.1) BS01 6YN 2.7.11.1 GO:0004672 ... P11309 27769621 MOAD: ic50=0.07nM
    PDBbind: -logKd/Ki=10.00, IC50=0.1nM
    BindingDB: IC50=0.08nM
    19272 5kzq:A (2.8) BS01 6YS ? GO:0004930 ... Q14416 28002967 PDBbind: -logKd/Ki=8.28, Ki=5.3nM
    19273 5l01:A (1.9) BS02 6Z4 1.14.16.4 GO:0002576 ... P17752 28041831 MOAD: ic50=33nM
    PDBbind: -logKd/Ki=7.48, IC50=33nM
    BindingDB: IC50=33nM
    19274 5l0h:A (2.9) BS01 PIO ? GO:0003779 ... P18206 27503891 PDBbind: -logKd/Ki=5.64, Kd=2.3uM
    19275 5l0m:A (2.197) BS01 dna ? GO:0003677 ... O00482 27984042 PDBbind: Kd=60nM
    19276 5l0m:A (2.197) BS02 dna ? GO:0003677 ... O00482 27984042 PDBbind: Kd=60nM
    19277 5l13:A (2.4) BS01 6ZE 1.2.1.3 GO:0004029 ... P05091 28219011 MOAD: Ki=19nM
    PDBbind: -logKd/Ki=6.96, IC50=0.11uM
    BindingDB: Ki=19nM, IC50=110nM
    19278 5l15:A (2.4) BS02 G39 3.2.1.18 GO:0004308 ... R4NFR6 28934455 PDBbind: -logKd/Ki=9.57, IC50=0.27nM
    19279 5l17:A (2.4) BS02 ZMR 3.2.1.18 GO:0004308 ... R4NFR6 28934455 PDBbind: -logKd/Ki=9.30, IC50=0.5nM
    19280 5l1z:B (5.9) BS01 rna ? GO:0006357 ... O60563 27731797 PDBbind: Kd=0.20nM
    19281 5l1z:D (5.9) BS01 rna ? GO:0001070 ... P69697 27731797 PDBbind: Kd=0.20nM
    19282 5l26:A (3.4) BS04 URI ? GO:0005337 ... G4CRQ5 28424521 PDBbind: -logKd/Ki=5.35, Kd=4.5uM
    19283 5l2i:A (2.75) BS01 LQQ 2.7.11.22 GO:0000082 ... Q00534 27496135 PDBbind: -logKd/Ki=7.40, Kd=40.1nM
    BindingDB: IC50=16nM, Ki=27nM
    19284 5l2m:A (1.7) BS01 6ZY 1.2.1.19
    1.2.1.28
    1.2.1.3
    1.2.1.36
    GO:0000166 ... P00352 28219011 MOAD: Ki=170nM
    PDBbind: -logKd/Ki=6.89, IC50=0.13uM
    BindingDB: Ki=170nM, IC50=130nM
    19285 5l2n:A (1.7) BS01 6ZU 1.2.1.19
    1.2.1.28
    1.2.1.3
    1.2.1.36
    GO:0000166 ... P00352 28219011 MOAD: ic50=2.8uM
    PDBbind: -logKd/Ki=5.55, IC50=2.8uM
    BindingDB: IC50=2800nM
    19286 5l2o:A (2.05) BS01 6ZW 1.2.1.19
    1.2.1.28
    1.2.1.3
    1.2.1.36
    GO:0000166 ... P00352 28219011 MOAD: ic50=0.76uM
    PDBbind: -logKd/Ki=6.12, IC50=0.76uM
    BindingDB: Ki=870nM, IC50=760nM
    19287 5l2s:A (2.27) BS01 6ZV 2.7.11.22 GO:0000082 ... Q00534 27496135 PDBbind: -logKd/Ki=7.08, Kd=83nM
    BindingDB: IC50=10.0nM, Ki=8.2nM
    19288 5l2t:A (2.37) BS01 6ZZ 2.7.11.22 GO:0000082 ... Q00534 27496135 PDBbind: -logKd/Ki=6.19, Kd=650nM
    BindingDB: IC50=39nM
    19289 5l2w:A (2.8) BS01 1QK 2.7.11.22 GO:0000082 ... P24941 27496135 PDBbind: -logKd/Ki=6.68, Kd=210nM
    19290 5l2y:H (1.82) BS01 70D 3.4.21.21 GO:0004252 ... P08709 27612545 MOAD: Ki=0.14nM
    PDBbind: -logKd/Ki=9.85, Ki=0.14nM
    BindingDB: Ki=0.140000nM
    19291 5l2z:H (1.79) BS01 70C 3.4.21.21 GO:0004252 ... P08709 27612545 MOAD: Ki=0.06nM
    PDBbind: -logKd/Ki=10.22, Ki=0.06nM
    BindingDB: Ki=0.060000nM
    19292 5l30:H (1.73) BS01 70A 3.4.21.21 GO:0004252 ... P08709 27612545 PDBbind: -logKd/Ki=9.14, Ki=0.72nM
    BindingDB: Ki=0.12nM
    19293 5l3a:A (1.98) BS01 6DP 2.7.10.2 GO:0004672 ... O60674 27326341 MOAD: Kd=13uM
    PDBbind: -logKd/Ki=4.89, Kd=13uM
    BindingDB: Kd=12589nM, IC50=13000nM
    19294 5l3e:A (2.8) BS02 E11 1.14.99.66 GO:0005634 ... O60341 27626075 PDBbind: -logKd/Ki=6.18, Kd=660nM
    BindingDB: Kd=243nM
    19295 5l3e:A (2.8) BS03 E11 1.14.99.66 GO:0005634 ... O60341 27626075 PDBbind: -logKd/Ki=6.18, Kd=660nM
    BindingDB: Kd=243nM
    19296 5l3e:A (2.8) BS04 E11 1.14.99.66 GO:0005634 ... O60341 27626075 PDBbind: -logKd/Ki=6.18, Kd=660nM
    BindingDB: Kd=243nM
    19297 5l3e:A (2.8) BS05 E11 1.14.99.66 GO:0005634 ... O60341 27626075 PDBbind: -logKd/Ki=6.18, Kd=660nM
    BindingDB: Kd=243nM
    19298 5l3j:A (2.83) BS01 6G9 5.6.2.2 GO:0003677 ... P0AES6 27541007 PDBbind: -logKd/Ki=6.64, Kd=0.23uM
    BindingDB: IC50=58nM, Kd=230nM
    19299 5l44:A (1.75) BS03 K26 ? GO:0004180 ... A0A1L1QK30 27754586 PDBbind: -logKd/Ki=4.40, IC50=40uM
    19300 5l4h:C (3.3) BS01 6JW ? GO:0004888 ... Q7NDN8 27986812 PDBbind: -logKd/Ki=3.75, IC50=177uM
    19301 5l4h:D (3.3) BS01 6JW ? GO:0004888 ... Q7NDN8 27986812 PDBbind: -logKd/Ki=3.75, IC50=177uM
    19302 5l4h:E (3.3) BS01 6JW ? GO:0004888 ... Q7NDN8 27986812 PDBbind: -logKd/Ki=3.75, IC50=177uM
    19303 5l4i:A (1.45) BS01 6J3 ? GO:0005179 ... P02766 27668830 MOAD: Kd=0.26uM
    PDBbind: -logKd/Ki=6.59, Kd=0.26uM
    19304 5l4i:B (1.45) BS01 6J3 ? GO:0005179 ... P02766 27668830 MOAD: Kd=0.26uM
    PDBbind: -logKd/Ki=6.59, Kd=0.26uM
    19305 5l4j:A (1.62) BS01 6JD ? GO:0005179 ... P02766 27668830 MOAD: Kd=52uM
    PDBbind: -logKd/Ki=4.28, Kd=52uM
    19306 5l4m:A (1.581) BS01 SBK ? GO:0005179 ... P02766 27668830 MOAD: Kd=4.6uM
    PDBbind: -logKd/Ki=5.34, Kd=4.6uM
    19307 5l4m:B (1.581) BS01 SBK ? GO:0005179 ... P02766 27668830 MOAD: Kd=4.6uM
    PDBbind: -logKd/Ki=5.34, Kd=4.6uM
    19308 5l6h:A (2.3) BS01 6O2 6.2.1.45 GO:0004839 ... P22515 28578874 PDBbind: -logKd/Ki=6.62, IC50=0.24uM
    19309 5l6i:A (2.76) BS01 B39 6.2.1.45 GO:0004839 ... P22515 28578874 PDBbind: -logKd/Ki=4.35, IC50=45uM
    19310 5l6j:A (2.68) BS01 61T 6.2.1.45 GO:0004839 ... P22515 28578874 PDBbind: -logKd/Ki=6.70, IC50=0.2uM
    19311 5l6o:A (1.88) BS01 6P6 2.7.10.1 GO:0004672 ... P54753 27478969 PDBbind: -logKd/Ki=8.22, IC50=6nM
    19312 5l6p:A (2.26) BS01 6P8 2.7.10.1 GO:0004672 ... P54753 27478969 PDBbind: -logKd/Ki=7.26, IC50=55nM
    19313 5l72:A (3.06) BS01 6PF 2.7.1.137
    2.7.1.153
    GO:0016301 ... O35904 27429068 PDBbind: -logKd/Ki=6.80, IC50=158nM
    19314 5l7e:A (1.86) BS02 6Q0 ? N/A P08235 27897427 MOAD: Ki=0.25uM
    PDBbind: -logKd/Ki=6.60, Ki=0.25uM
    19315 5l7f:A (1.8) BS07 6PJ 3.4.24.65 GO:0004222 ... P39900 27564088 PDBbind: -logKd/Ki=9.05, Ki=0.90nM
    19316 5l7g:A (2.01) BS02 6QE ? N/A P08235 27897427 MOAD: Ki=16nM
    PDBbind: -logKd/Ki=7.80, Ki=16nM
    19317 5l7h:A (1.84) BS02 6QG ? N/A P08235 27897427 MOAD: Ki=50nM
    PDBbind: -logKd/Ki=7.30, Ki=50nM
    19318 5l87:A (0.87) BS01 6RD ? GO:0005778 ... Q8IEW2 28360328 MOAD: Ki=8.43uM
    PDBbind: -logKd/Ki=5.07, Ki=8.43uM
    19319 5l8a:A (1.57) BS01 6RB ? GO:0005778 ... Q8IEW2 28360328 MOAD: Ki=12.3uM
    PDBbind: -logKd/Ki=4.91, Ki=12.3uM
    19320 5l8c:A (2.01) BS02 908 3.1.4.- GO:0004114 ... Q8WQX9 29672041 MOAD: Ki=100nM
    PDBbind: -logKd/Ki=7.00, Ki=100nM
    BindingDB: Ki=100nM
    19321 5l8n:A (2.12) BS01 6RQ ? GO:0005504 ... P51161 27500412 MOAD: Kd=31uM
    PDBbind: -logKd/Ki=4.51, Kd=31uM
    BindingDB: Kd=2800nM
    19322 5l8t:A (1.85) BS01 6RR ? N/A Q9UIF8 27731638 PDBbind: -logKd/Ki=3.55, IC50=279uM
    19323 5l8y:B (2.14) BS02 CVA 3.1.4.- GO:0004114 ... Q8WQX9 29672041 MOAD: Ki=400nM
    PDBbind: -logKd/Ki=6.40, Ki=398nM
    BindingDB: Ki=398nM
    19324 5l96:A (2.15) BS01 6RZ ? N/A Q9UIF8 27731638 PDBbind: -logKd/Ki=3.30, IC50>500uM
    19325 5l97:A (2.05) BS01 6RW ? N/A Q9UIF8 27731638 PDBbind: -logKd/Ki=3.00, IC50>1000uM
    19326 5l98:A (2.263) BS01 6RY ? N/A Q9UIF8 27731638 PDBbind: -logKd/Ki=3.31, IC50=490uM
    19327 5l99:A (2.0) BS01 6S0 ? N/A Q9UIF8 27731638 PDBbind: -logKd/Ki=3.32, IC50=481uM
    19328 5l9g:A (1.75) BS01 MO0 N/A N/A N/A 27609514 MOAD: Kd=19.8nM
    PDBbind: -logKd/Ki=7.70, Kd=19.8nM
    19329 5l9h:A (2.25) BS02 CVL 3.1.4.- GO:0004114 ... Q8WQX9 29672041 MOAD: ic50=0.4uM
    PDBbind: -logKd/Ki=6.40, IC50=0.4uM
    BindingDB: IC50=400nM
    19330 5l9i:A (1.9) BS01 SNW N/A N/A N/A 27609514 MOAD: Kd=99nM
    PDBbind: -logKd/Ki=7.00, Kd=99nM
    19331 5l9l:A (1.8) BS01 GOP N/A N/A N/A 27609514 MOAD: Kd=79.4nM
    PDBbind: -logKd/Ki=7.10, Kd=79.4nM
    19332 5l9o:A (1.84) BS01 GOP ? GO:0015276 ... Q7D447 27609514 MOAD: Kd=4uM
    PDBbind: -logKd/Ki=5.40, Kd=4uM
    19333 5laq:A (2.4) BS02 6M5 3.1.4.53 GO:0004114 ... Q07343 29672041 MOAD: Ki=0.63nM
    PDBbind: -logKd/Ki=9.20, Ki=0.63nM
    BindingDB: IC50=0.630957nM, Ki=0.630957nM
    19334 5lav:A (1.73) BS01 6SK 2.3.2.27 GO:0005634 ... Q00987 27775892 PDBbind: -logKd/Ki=6.09, IC50=819nM
    19335 5law:A (1.64) BS01 6SJ 2.3.2.27 GO:0005634 ... Q00987 27775892 PDBbind: -logKd/Ki=7.10, IC50=80nM
    19336 5lay:A (2.71) BS01 6SS 2.3.2.27 GO:0005634 ... Q00987 27775892 PDBbind: -logKd/Ki=7.47, IC50=34nM
    19337 5laz:A (1.66) BS01 6ST 2.3.2.27 GO:0005634 ... Q00987 27775892 PDBbind: -logKd/Ki=8.40, IC50=4nM
    19338 5lbq:A (3.3) BS02 767 1.14.99.66 GO:0005634 ... O60341 27626075 PDBbind: -logKd/Ki=5.11, Kd=7.78uM
    19339 5lbq:A (3.3) BS03 767 1.14.99.66 GO:0005634 ... O60341 27626075 PDBbind: -logKd/Ki=5.11, Kd=7.78uM
    19340 5lc0:A (2.7) BS01 6T8 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... A0A140DLX4 27386922 PDBbind: -logKd/Ki=6.70, IC50=0.20uM
    19341 5lc0:A (2.7) BS02 6T8 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... A0A140DLX4 27386922 PDBbind: -logKd/Ki=6.70, IC50=0.20uM
    19342 5lc0:B (2.7) BS01 6T8 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... A0A140DLX4 27386922 PDBbind: -logKd/Ki=6.70, IC50=0.20uM
    19343 5lc0:B (2.7) BS02 6T8 3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003723 ... A0A140DLX4 27386922 PDBbind: -logKd/Ki=6.70, IC50=0.20uM
    19344 5lca:A (1.93) BS03 B06 3.5.2.6 N/A Q9K2N0 28451231 MOAD: ic50=32.8uM
    PDBbind: -logKd/Ki=4.48, IC50=32.8uM
    19345 5lcf:A (1.86) BS03 6TJ 3.5.2.6 N/A Q9K2N0 28451231 MOAD: ic50=17.8uM
    PDBbind: -logKd/Ki=4.75, IC50=17.8uM
    19346 5lch:A (1.94) BS03 6TU 3.5.2.6 N/A Q9K2N0 28451231 MOAD: ic50=20.3uM
    PDBbind: -logKd/Ki=4.69, IC50=20.3uM
    19347 5lcj:A (1.78) BS01 6TS 2.7.11.24 GO:0000165 ... P28482 27385078 PDBbind: -logKd/Ki=6.64, IC50=0.23uM
    19348 5lck:A (1.89) BS01 6TT 2.7.11.24 GO:0000165 ... P28482 27385078 PDBbind: -logKd/Ki=8.10, IC50=0.008uM
    19349 5ld8:A (2.13) BS01 6U5 2.3.1.293 GO:0004315 ... P9WQD9 27581223 MOAD: Kd=9nM
    PDBbind: -logKd/Ki=8.05, Kd=9nM
    19350 5ld8:B (2.13) BS01 6U5 2.3.1.293 GO:0004315 ... P9WQD9 27581223 MOAD: Kd=9nM
    PDBbind: -logKd/Ki=8.05, Kd=9nM
    19351 5ldk:B (2.099) BS01 ATP 3.1.4.58 GO:0004113 ... A0A140NFI1 28141848 MOAD: Ka=15000M^-1
    PDBbind: -logKd/Ki=4.17, Kd=67uM
    19352 5ldm:A (2.46) BS01 2AM 3.1.4.58 GO:0004113 ... A0A140NFI1 28141848 MOAD: Ka=7210M^-1
    PDBbind: -logKd/Ki=3.86, Kd=139uM
    19353 5ldo:A (2.752) BS01 3AM 3.1.4.58 GO:0004113 ... A0A140NFI1 28141848 PDBbind: -logKd/Ki=3.75, Kd=177uM
    19354 5ldp:A (1.8) BS01 ATP 3.1.4.58 GO:0004113 ... A0A140NFI1 28141848 MOAD: Ka=15000M^-1
    PDBbind: -logKd/Ki=4.17, Kd=67uM
    19355 5le1:A (1.4) BS03 6UW 3.5.2.6 N/A Q9K2N0 28451231 MOAD: ic50=10.6uM
    PDBbind: -logKd/Ki=4.97, IC50=10.6uM
    19356 5lg3:A (3.567) BS01 Z80 ? GO:0004888 ... E0SJQ4 27791038 PDBbind: -logKd/Ki=3.80, IC50=158uM
    19357 5lg3:B (3.567) BS01 Z80 ? GO:0004888 ... E0SJQ4 27791038 PDBbind: -logKd/Ki=3.80, IC50=158uM
    19358 5lgn:A (3.2) BS02 6W0 1.14.99.66 GO:0005634 ... O60341 28186755 PDBbind: -logKd/Ki=5.54, IC50=2.9uM
    BindingDB: IC50=13400nM, Ki=43000nM
    19359 5lgo:A (1.12) BS02 6VZ 3.4.21.4 GO:0004175 ... P00760 27476144 PDBbind: -logKd/Ki=8.22, IC50=0.006uM
    19360 5lgt:A (3.0) BS02 6W3 1.14.99.66 GO:0005634 ... O60341 28186757 PDBbind: -logKd/Ki=6.51, IC50=0.31uM
    BindingDB: Ki=2300nM, IC50=310nM
    19361 5lgu:A (3.2) BS02 6W1 1.14.99.66 GO:0005634 ... O60341 28186757 PDBbind: -logKd/Ki=7.66, IC50=0.022uM
    BindingDB: IC50=22nM
    19362 5lh4:A (1.37) BS02 6W4 3.4.21.4 GO:0004175 ... P00760 27476144 PDBbind: -logKd/Ki=6.96, IC50=0.11uM
    19363 5lh8:A (1.54) BS02 6WH 3.4.21.4 GO:0004175 ... P00760 27476144 PDBbind: -logKd/Ki=7.72, IC50=0.019uM
    19364 5lhg:A (3.34) BS02 6X3 1.14.99.66 GO:0000122 ... O60341 28186757 PDBbind: -logKd/Ki=5.60, IC50=2.5uM
    BindingDB: IC50=2500nM
    19365 5lhg:A (3.34) BS03 6X3 1.14.99.66 GO:0000122 ... O60341 28186757 PDBbind: -logKd/Ki=5.60, IC50=2.5uM
    BindingDB: IC50=2500nM
    19366 5lhh:A (3.05) BS02 6X0 1.14.99.66 GO:0000122 ... O60341 28186757 PDBbind: -logKd/Ki=8.17, IC50=6.7nM
    BindingDB: IC50=6.7nM
    19367 5lhi:A (3.4) BS02 6X5 1.14.99.66 GO:0000122 ... O60341 28186757 PDBbind: -logKd/Ki=8.11, IC50=7.8nM
    BindingDB: IC50=7.8nM
    19368 5lhu:A (2.02) BS01 HIS 2.4.2.17 GO:0000105 ... P9WMN1 28781362 PDBbind: -logKd/Ki=4.66, IC50=22uM
    19369 5li3:A (2.4) BS02 9RB 3.5.1.- GO:0004407 ... Q9HXM1 27756124 MOAD: ic50=0.053uM
    PDBbind: -logKd/Ki=7.28, IC50=0.053uM
    19370 5li3:B (2.4) BS01 9RB 3.5.1.- GO:0004407 ... Q9HXM1 27756124 MOAD: ic50=0.053uM
    PDBbind: -logKd/Ki=7.28, IC50=0.053uM
    19371 5li3:B (2.4) BS03 9RB 3.5.1.- GO:0004407 ... Q9HXM1 27756124 MOAD: ic50=0.053uM
    PDBbind: -logKd/Ki=7.28, IC50=0.053uM
    19372 5lif:E (1.31) BS06 6XO 3.4.24.27 GO:0004222 ... P00800 27959500 MOAD: Kd=1.34uM
    PDBbind: -logKd/Ki=5.87, Kd=1.34uM
    19373 5lj0:A (1.82) BS01 6XX 3.6.1.- N/A Q6PL18 27530368 MOAD: ic50=0.00000001M
    PDBbind: -logKd/Ki=8.00, IC50=10nM
    BindingDB: IC50=50nM
    19374 5lj1:A (1.9) BS01 6XX ? N/A O60885 27530368 MOAD: ic50>0.0000316M
    PDBbind: -logKd/Ki=4.50, IC50>31.6uM
    BindingDB: IC50=25119nM
    19375 5lj2:A (1.19) BS01 6XW ? N/A O60885 27530368 MOAD: ic50=10uM
    PDBbind: -logKd/Ki=5.00, IC50=10uM
    19376 5ljj:A (3.0) BS01 AD5 2.7.12.1 GO:0004672 ... P33981 27699881 PDBbind: -logKd/Ki=7.21, Kd=62nM
    19377 5ljq:A (1.05) BS02 ANV 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 27933963 MOAD: Ki=1nM
    PDBbind: -logKd/Ki=9.00, Ki=1nM
    19378 5ljt:A (1.0) BS02 A6N 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 27933963 MOAD: Ki=1.2nM
    PDBbind: -logKd/Ki=8.92, Ki=1.2nM
    19379 5lkr:A (2.52) BS02 6YC 3.1.1.8 GO:0001540 ... P06276 27908752 PDBbind: -logKd/Ki=5.48, IC50=3.306uM
    BindingDB: IC50=3306nM
    19380 5ll4:A (1.12) BS02 6YH 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 N/A PDBbind: -logKd/Ki=8.40, Kd=4nM
    BindingDB: Kd=4nM
    19381 5ll5:A (1.42) BS02 6YH 4.2.1.1 GO:0004089 ... O43570 N/A PDBbind: -logKd/Ki=6.04, Kd=909nM
    BindingDB: Kd=320nM, kon=280000M-1-s-1, koff=0.051s-1
    19382 5ll7:A (1.4) BS01 6YV 3.5.2.6 GO:0008800 ... A0A0H4IUK8 29356380 PDBbind: -logKd/Ki=5.61, Ki=2.43uM
    19383 5ll9:A (1.45) BS02 6YQ 4.2.1.1 GO:0004089 ... O43570 N/A PDBbind: -logKd/Ki=6.08, Kd=833nM
    BindingDB: Kd=833nM, kon=380000M-1-s-1, koff=0.17s-1
    19384 5lla:B (1.5) BS02 6YQ 4.2.1.1 GO:0004089 ... Q8N1Q1 N/A PDBbind: -logKd/Ki=7.72, Kd=18.9nM
    BindingDB: kon=630000M-1-s-1, koff=0.0020s-1, Kd=19nM
    19385 5llc:A (1.1) BS02 V26 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29503769 PDBbind: -logKd/Ki=9.52, Kd=0.3nM
    BindingDB: Kd=8.2nM, kon=1300000M-1-s-1, koff=0.0082s-1
    19386 5lle:A (1.9) BS02 V51 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29503769 PDBbind: -logKd/Ki=10.22, Kd=0.060nM
    BindingDB: Kd=5.0nM
    19387 5llg:A (1.12) BS02 VD9 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29503769 PDBbind: -logKd/Ki=11.13, Kd=0.0074nM
    BindingDB: Kd=13nM
    19388 5llg:A (1.12) BS03 VD9 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29503769 PDBbind: -logKd/Ki=11.13, Kd=0.0074nM
    BindingDB: Kd=13nM
    19389 5llh:A (1.9) BS02 V49 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29503769 PDBbind: -logKd/Ki=10.17, Kd=0.067nM
    BindingDB: Kd=1.1nM
    19390 5lli:C (2.4) BS01 6Z3 ? N/A P40337 27811928 MOAD: Kd=90nM
    PDBbind: -logKd/Ki=7.05, Kd=90nM
    BindingDB: Kd=90nM, IC50=88nM
    19391 5llm:A (3.25) BS02 6Z6 ? GO:0015293 ... P43003
    Q15758
    28424515 PDBbind: -logKd/Ki=5.35, IC50=4.5uM
    19392 5llo:A (1.6) BS02 5EF 4.2.1.1 GO:0004089 ... O43570 29503769 PDBbind: -logKd/Ki=9.40, Kd=0.4nM
    19393 5llp:A (1.48) BS02 6Z9 4.2.1.1 GO:0004089 ... O43570 29503769 PDBbind: -logKd/Ki=9.24, Kd=0.58nM
    19394 5lm4:A (3.1) BS02 6Z6 ? GO:0015293 ... P43003
    Q15758
    28424515 PDBbind: -logKd/Ki=3.88, Kd>131uM
    19395 5lm6:A (1.17) BS03 H32 3.5.2.6 N/A Q9K2N0 28451231 MOAD: ic50=7.7uM
    PDBbind: -logKd/Ki=5.11, IC50=7.7uM
    19396 5lma:A (1.43) BS01 6ZG 2.7.10.2 GO:0004672 ... P43405 27578246 MOAD: ic50=0.25uM
    PDBbind: -logKd/Ki=6.60, IC50=0.25uM
    BindingDB: IC50=2512nM
    19397 5lmb:A (1.95) BS01 6ZF 2.7.10.2 GO:0004672 ... P43405 27578246 MOAD: ic50=16nM
    PDBbind: -logKd/Ki=7.80, IC50=15.8nM
    BindingDB: IC50=16nM
    19398 5lmk:A (2.4) BS01 6ZK 2.7.11.22 GO:0000082 ... P24941 28039837 PDBbind: -logKd/Ki=7.43, IC50=0.037uM
    BindingDB: IC50=37nM
    19399 5lne:A (2.2) BS01 GAL ? GO:0007155 ... A0A0H2V7F6 27667696 PDBbind: -logKd/Ki=4.76, Kd=17.43uM
    19400 5lny:A (1.88) BS01 70K 3.6.4.10 GO:0005524 ... P07900 29701469 MOAD: Kd=42nM
    PDBbind: -logKd/Ki=7.38, Kd=42nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218