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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    18801 5ioz:A (2.02) BS01 6C4 ? GO:0000976 ... A5U9I4 28314097 MOAD: Kd=11uM
    PDBbind: -logKd/Ki=4.96, Kd=11uM
    18802 5ipa:A (1.78) BS01 6C8 ? GO:0000976 ... A5U9I4 28314097 MOAD: Kd=20uM
    PDBbind: -logKd/Ki=4.70, Kd=20uM
    18803 5ipa:A (1.78) BS02 6C8 ? GO:0000976 ... A5U9I4 28314097 MOAD: Kd=20uM
    PDBbind: -logKd/Ki=4.70, Kd=20uM
    18804 5ipa:A (1.78) BS03 6C8 ? GO:0000976 ... A5U9I4 28314097 MOAD: Kd=20uM
    PDBbind: -logKd/Ki=4.70, Kd=20uM
    18805 5ipc:A (1.3) BS01 6CE 3.4.22.-
    3.9.1.-    		 GO:0000118 ... P49773 28691797 MOAD: Kd=13uM
    PDBbind: -logKd/Ki=4.89, Kd=13uM
    18806 5ipj:A (2.1) BS01 6CD 2.7.11.1 GO:0004672 ... P11309 27285051 MOAD: Kd=1.3nM
    PDBbind: -logKd/Ki=8.89, Kd=1.3nM
    BindingDB: IC50=0.300000nM, Kd=1.3nM
    18807 5irr:A (2.04) BS02 GSP ? GO:0005525 ... A8IYS5 28476887 MOAD: Kd=5.4uM
    PDBbind: -logKd/Ki=5.27, Kd=5.4uM
    18808 5irr:A (2.04) BS03 GSP ? GO:0005525 ... A8IYS5 28476887 MOAD: Kd=5.4uM
    PDBbind: -logKd/Ki=5.27, Kd=5.4uM
    18809 5isl:A (1.694) BS01 MMK 1.14.11.67 N/A P29375 27427228 MOAD: Kd=0.052uM
    PDBbind: -logKd/Ki=7.28, Kd=0.052uM
    18810 5ism:A (2.0) BS01 6DG 3.4.14.5 GO:0001618 ... P27487 27106708 MOAD: ic50=0.7nM
    PDBbind: -logKd/Ki=9.15, IC50=0.7nM
    BindingDB: IC50=0.700000nM
    18811 5itd:A (3.02) BS01 6CY 2.7.11.1
    2.7.1.137
    2.7.1.153    		 GO:0001525 ... P42336 27563400 PDBbind: -logKd/Ki=6.58, IC50=0.262uM
    BindingDB: IC50=262nM
    18812 5ith:A (2.31) BS01 dna ? GO:0003676 ... P31483 28184449 PDBbind: Kd=0.03uM
    18813 5ito:A (2.35) BS01 6DB ? GO:0015276 ... P35120 27801902 MOAD: Kd=68.9uM
    PDBbind: -logKd/Ki=4.16, Kd=68.9uM
    18814 5itp:A (1.85) BS01 6DB ? GO:0015276 ... P35120 27801902 MOAD: Kd=9.9uM
    PDBbind: -logKd/Ki=5.00, Kd=9.9uM
    18815 5iu2:A (2.7) BS01 6DA 2.7.11.25 GO:0004672 ... P41279 27502541 PDBbind: -logKd/Ki=7.80, IC50=0.016uM
    BindingDB: IC50=16nM
    18816 5iu4:A (1.72) BS01 ZMA ? GO:0001609 ... P0ABE7
    P29274    		 27312113 MOAD: Ki=0.53nM
    PDBbind: -logKd/Ki=9.28, Ki=0.53nM
    18817 5iu6:A (2.51) BS01 7HX 2.4.2.1 GO:0003824 ... P0ABP8 29870020 PDBbind: -logKd/Ki=3.89, Ki=0.13mM
    18818 5iu6:B (2.51) BS01 7HX 2.4.2.1 GO:0003824 ... P0ABP8 29870020 PDBbind: -logKd/Ki=3.89, Ki=0.13mM
    18819 5iu7:A (1.9) BS01 6DY ? GO:0001609 ... P0ABE7
    P29274    		 27312113 MOAD: Ki=1.1nM
    PDBbind: -logKd/Ki=8.96, Ki=1.1nM
    18820 5iu8:A (2.002) BS01 6DZ ? GO:0001609 ... P0ABE7
    P29274    		 27312113 MOAD: Ki=18nM
    PDBbind: -logKd/Ki=7.74, Ki=18nM
    18821 5iua:A (2.2) BS01 6DX ? GO:0001609 ... P0ABE7
    P29274    		 27312113 MOAD: Ki=1.5nM
    PDBbind: -logKd/Ki=8.82, Ki=1.5nM
    18822 5iub:A (2.1) BS01 6DV ? GO:0001609 ... P0ABE7
    P29274    		 27312113 MOAD: Ki=0.35nM
    PDBbind: -logKd/Ki=9.46, Ki=0.35nM
    18823 5iug:A (1.93) BS01 729 2.7.10.1 GO:0004672 ... Q9UM73 27031565 MOAD: ic50=177nM
    PDBbind: -logKd/Ki=7.33, Kd=46.4nM
    BindingDB: IC50=177nM, Kd=2.4nM
    18824 5iuh:A (2.1) BS01 34Y 2.7.10.1 GO:0004672 ... Q9UM73 27031565 MOAD: ic50=402nM
    PDBbind: -logKd/Ki=6.40, IC50=402nM
    BindingDB: IC50=402nM
    18825 5iui:A (1.88) BS01 45Q 2.7.10.1 GO:0004672 ... Q9UM73 27031565 PDBbind: -logKd/Ki=5.00, IC50>10000nM
    BindingDB: IC50=>10000nM
    18826 5iv4:A (1.79) BS01 LRI 4.6.1.1 GO:0009190 ... Q96PN6 27547922 PDBbind: -logKd/Ki=5.48, IC50=3.3uM
    BindingDB: IC50=3300nM
    18827 5ivc:A (1.573) BS01 6E7 1.14.11.67 N/A P29375 27427228 MOAD: Kd=1.2uM
    PDBbind: -logKd/Ki=5.92, Kd=1.2uM
    18828 5ive:A (1.783) BS01 6E8 1.14.11.67 N/A P29375 27427228 MOAD: Kd=0.027uM
    PDBbind: -logKd/Ki=7.57, Kd=0.027uM
    BindingDB: IC50=9.3nM
    18829 5ivf:A (1.683) BS01 6EB 1.14.11.67 N/A P29375 27427228 PDBbind: -logKd/Ki=4.40, Kd>40uM
    BindingDB: IC50=<100nM
    18830 5ivj:A (1.569) BS01 6ED 1.14.11.67 N/A P29375 27427228 MOAD: Kd=0.046uM
    PDBbind: -logKd/Ki=7.34, Kd=0.046uM
    BindingDB: IC50=<100nM
    18831 5ivs:A (1.46) BS01 6EF ? GO:0004190 ... Q77VV3 27437081 PDBbind: -logKd/Ki=8.21, IC50=6.1nM
    18832 5ivs:B (1.46) BS01 6EF ? GO:0004190 ... Q77VV3 27437081 MOAD: ic50=6.1nM
    PDBbind: -logKd/Ki=8.21, IC50=6.1nM
    18833 5ivt:A (1.15) BS01 6EE ? GO:0004190 ... G0X8E8 27437081 MOAD: ic50=0.8nM
    PDBbind: -logKd/Ki=9.10, IC50=0.8nM
    18834 5ivt:A (1.15) BS02 6EE ? GO:0004190 ... G0X8E8 27437081 MOAD: ic50=0.8nM
    PDBbind: -logKd/Ki=9.10, IC50=0.8nM
    18835 5ivt:B (1.15) BS01 6EE ? GO:0004190 ... G0X8E8 27437081 MOAD: ic50=0.8nM
    PDBbind: -logKd/Ki=9.10, IC50=0.8nM
    18836 5ivt:B (1.15) BS02 6EE ? GO:0004190 ... G0X8E8 27437081 MOAD: ic50=0.8nM
    PDBbind: -logKd/Ki=9.10, IC50=0.8nM
    18837 5ivv:A (1.848) BS01 6EN 1.14.11.67 N/A P29375 27427228 MOAD: Kd=0.45uM
    PDBbind: -logKd/Ki=6.35, Kd=0.45uM
    BindingDB: IC50=<100nM
    18838 5ivy:A (1.45) BS01 6EO 1.14.11.67 N/A P29375 27427228 MOAD: Kd=0.36uM
    PDBbind: -logKd/Ki=6.44, Kd=0.36uM
    18839 5iw0:A (1.63) BS01 6EP 1.14.11.67 N/A P29375 27427228 MOAD: Kd=0.06uM
    PDBbind: -logKd/Ki=7.22, Kd=0.06uM
    BindingDB: IC50=<100nM, EC50=90nM
    18840 5iwg:A (1.66) BS03 IWX 3.5.1.-
    3.5.1.98    		 GO:0004407 ... Q92769 27377864 MOAD: Ki=0.346uM
    PDBbind: -logKd/Ki=6.46, Ki=0.346uM
    BindingDB: IC50=62nM
    18841 5ix0:A (1.72) BS04 6EZ 3.5.1.-
    3.5.1.98    		 GO:0004407 ... Q92769 27377864 MOAD: Ki=0.519uM
    PDBbind: -logKd/Ki=6.28, Ki=0.519uM
    BindingDB: IC50=168nM, Ki=519nM
    18842 5iyy:A (1.6) BS01 R40 ? N/A O14786 29430837 PDBbind: -logKd/Ki=4.77, Kd=17uM
    18843 5izc:A (1.92) BS02 6F4 1.5.1.33 GO:0000166 ... O76290 28983525 PDBbind: -logKd/Ki=3.95, IC50=112uM
    18844 5izj:A (1.85) BS02 6J9 2.7.11.11 GO:0000287 ... P17612 27389935 PDBbind: -logKd/Ki=11.52, Kd=0.003nM
    18845 5izk:A (3.25) BS01 GDP 3.6.5.- GO:0000049 ... P57772 27708257 PDBbind: -logKd/Ki=6.72, Kd=0.19uM
    18846 5izm:A (3.4) BS02 GNP 3.6.5.- GO:0000049 ... P57772 27708257 PDBbind: -logKd/Ki=5.92, Kd=1.2uM
    18847 5izq:A (3.6) BS01 83A ? N/A P15328 27458733 PDBbind: -logKd/Ki=8.52, IC50=3.04nM
    BindingDB: IC50=3.0nM
    18848 5j0d:A (1.05) BS01 6F9 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92793 27673482 MOAD: Kd=134nM
    PDBbind: -logKd/Ki=6.87, Kd=134nM
    BindingDB: Kd=134nM
    18849 5j18:A (-1.00) BS01 6FS 2.7.11.1 GO:0007165 ... P15056 27104980 PDBbind: -logKd/Ki=9.15, Kd=0.71nM
    18850 5j1r:A (1.92) BS01 6FG ? GO:0000976 ... P9WMC1 28314097 MOAD: Kd=22uM
    PDBbind: -logKd/Ki=4.66, Kd=22uM
    BindingDB: Kd=2.2e+4nM
    18851 5j1v:A (2.52) BS01 6FD 2.7.12.1 GO:0004672 ... P49759 27128181 PDBbind: -logKd/Ki=7.39, IC50=0.041uM
    BindingDB: IC50=41nM
    18852 5j1w:A (2.42) BS01 6FB 2.7.12.1 GO:0004672 ... P49759 27128181 MOAD: ic50=0.19uM
    PDBbind: -logKd/Ki=6.72, IC50=0.19uM
    BindingDB: IC50=190nM
    18853 5j1x:A (2.1) BS01 AR5 ? N/A O14786 29430837 PDBbind: -logKd/Ki=5.52, Kd=3uM
    18854 5j20:A (1.76) BS01 6FJ 3.6.4.10 GO:0005524 ... P07900 29273709 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=9.14, Kd=0.72nM
    18855 5j27:A (1.7) BS01 6FF 3.6.4.10 GO:0005524 ... P07900 29273709 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=6.74, Kd=180nM
    18856 5j2x:A (1.22) BS01 6DL 3.6.4.10 GO:0005524 ... P07900 29273709 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=7.74, Kd=18nM
    18857 5j32:A (1.933) BS02 IPM 1.1.1.85 GO:0000287 ... P93832 27137927 MOAD: Kd=8.3uM
    PDBbind: -logKd/Ki=5.08, Kd=8.3uM
    18858 5j32:B (1.933) BS02 IPM 1.1.1.85 GO:0000287 ... P93832 27137927 PDBbind: -logKd/Ki=5.08, Kd=8.3uM
    18859 5j3l:A (1.66) BS01 6FR ? GO:0000976 ... P9WMC1 28314097 MOAD: Kd=16uM
    PDBbind: -logKd/Ki=4.80, Kd=16uM
    BindingDB: Kd=1.6e+4nM
    18860 5j3s:A (3.4) BS01 6FQ 3.1.4.- GO:0003824 ... O95551 27099339 PDBbind: -logKd/Ki=7.72, IC50=19nM
    BindingDB: IC50=590nM, EC50=40nM
    18861 5j41:A (1.19035) BS01 3LF 2.5.1.18 GO:0000302 ... P09211 27872191 PDBbind: -logKd/Ki=3.70, Ki=199uM
    18862 5j41:A (1.19035) BS02 GSH 2.5.1.18 GO:0000302 ... P09211 27872191 PDBbind: -logKd/Ki=3.70, Ki=199uM
    18863 5j41:B (1.19035) BS01 3LF 2.5.1.18 GO:0000302 ... P09211 27872191 PDBbind: -logKd/Ki=3.70, Ki=199uM
    18864 5j41:B (1.19035) BS02 GSH 2.5.1.18 GO:0000302 ... P09211 27872191 PDBbind: -logKd/Ki=3.70, Ki=199uM
    18865 5j47:A (1.99) BS02 6JJ 3.6.4.- GO:0003677 ... P03072 27385654 MOAD: ic50=4.9uM
    PDBbind: -logKd/Ki=5.31, IC50=4.9uM
    BindingDB: IC50=4900nM
    18866 5j4n:A (2.594) BS01 AG2 ? GO:0003333 ... P60061 27582465 PDBbind: -logKd/Ki=4.25, Ki=56uM
    18867 5j4v:A (2.94) BS02 6JH 3.6.4.- GO:0003677 ... P03072 27385654 PDBbind: -logKd/Ki=5.85, IC50=1.4uM
    BindingDB: IC50=1400nM
    18868 5j4y:A (2.59) BS02 6JG 3.6.4.- GO:0003677 ... P03072 27385654 PDBbind: -logKd/Ki=6.05, IC50=0.9uM
    BindingDB: IC50=900nM
    18869 5j58:B (2.8) BS01 N56 6.1.1.10 GO:0000166 ... Q38C91 27788467 PDBbind: -logKd/Ki=7.30, IC50<50nM
    18870 5j59:B (2.4) BS01 N93 6.1.1.10 GO:0000166 ... Q38C91 27788467 MOAD: ic50<50nM
    PDBbind: -logKd/Ki=7.30, IC50<50nM
    18871 5j5d:A (2.4) BS01 6GT 4.3.3.7 GO:0005737 ... P9WP25 27501775 PDBbind: -logKd/Ki=4.68, IC50=21uM
    18872 5j5r:A (1.6) BS01 6G1 1.1.1.205 GO:0003824 ... G7CNL4 27726334 MOAD: Ki=130nM
    PDBbind: -logKd/Ki=6.89, Ki=130nM
    18873 5j5t:A (2.85) BS01 6G2 2.7.11.1 GO:0004672 ... Q8IVH8 27727493 PDBbind: -logKd/Ki=6.96, IC50=110nM
    18874 5j5x:A (2.6) BS02 6J9 2.7.11.11 GO:0000287 ... P17612 27389935 PDBbind: -logKd/Ki=11.02, Kd=0.0095nM
    18875 5j64:A (1.38) BS01 6G7 3.6.4.10 GO:0005524 ... P07900 29273709 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=6.85, Kd=140nM
    18876 5j6a:A (2.045) BS01 P46 2.7.11.2 GO:0004672 ... Q15119 28085286 MOAD: Kd=22nM
    PDBbind: -logKd/Ki=7.77, Kd=17nM
    18877 5j6d:A (1.9) BS02 6H5 1.14.16.4 GO:0004497 ... P17752 27146606 MOAD: ic50=6nM
    PDBbind: -logKd/Ki=8.22, IC50=6nM
    18878 5j6l:A (1.75) BS01 6GC 3.6.4.10 GO:0005524 ... P07900 29273709 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=7.89, Kd=13nM
    18879 5j6m:A (1.64) BS01 6FJ 3.6.4.10 GO:0005524 ... P07900 29273709 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=8.57, Kd=2.7nM
    18880 5j6n:A (1.9) BS01 6FF 3.6.4.10 GO:0005524 ... P07900 29273709 PDBbind: -logKd/Ki=7.77, Kd=17nM
    18881 5j6s:A (2.8) BS02 6GA 3.4.11.- GO:0002250 ... Q6P179 28337326 PDBbind: -logKd/Ki=4.00, IC50>100uM
    BindingDB: IC50=>100000nM
    18882 5j71:A (1.65) BS01 P35 2.7.11.2 GO:0004672 ... Q15119 28085286 PDBbind: -logKd/Ki=6.96, Kd=110nM
    BindingDB: Kd=110nM, IC50=195nM
    18883 5j74:A (2.7) BS01 6GN N/A N/A N/A 26442911 PDBbind: -logKd/Ki=8.72, Kd=1.9nM
    18884 5j75:A (2.0) BS01 6GQ N/A N/A N/A 26442911 MOAD: Ki=0.63nM
    PDBbind: -logKd/Ki=6.82, IC50=150nM
    18885 5j75:A (2.0) BS02 6GQ N/A N/A N/A 26442911 MOAD: Ki=0.63nM
    PDBbind: -logKd/Ki=6.82, IC50=150nM
    18886 5j79:A (2.69) BS01 6GE 2.7.10.2
    2.7.11.1    		 GO:0004672 ... O43353 27109867 PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=20nM
    18887 5j7b:A (2.53) BS01 6GD 2.7.10.2
    2.7.11.1    		 GO:0004672 ... O43353 27109867 PDBbind: -logKd/Ki=8.30, IC50=5nM
    18888 5j7f:A (2.0) BS01 6GG 2.3.2.27 GO:0005634 ... Q00987 28482147 PDBbind: -logKd/Ki=7.24, IC50=0.058uM
    BindingDB: Ki=58nM
    18889 5j7f:A (2.0) BS02 6GG 2.3.2.27 GO:0005634 ... Q00987 28482147 PDBbind: -logKd/Ki=7.24, IC50=0.058uM
    BindingDB: Ki=58nM
    18890 5j7f:D (2.0) BS01 6GG 2.3.2.27 GO:0005634 ... Q00987 28482147 PDBbind: -logKd/Ki=7.24, IC50=0.058uM
    BindingDB: Ki=58nM
    18891 5j7f:D (2.0) BS02 6GG 2.3.2.27 GO:0005634 ... Q00987 28482147 PDBbind: -logKd/Ki=7.24, IC50=0.058uM
    BindingDB: Ki=58nM
    18892 5j7g:A (1.85) BS01 6GG 2.3.2.27 GO:0005634 ... Q00987 28482147 PDBbind: -logKd/Ki=7.24, IC50=0.058uM
    BindingDB: Ki=58nM
    18893 5j7g:A (1.85) BS02 6GG 2.3.2.27 GO:0005634 ... Q00987 28482147 PDBbind: -logKd/Ki=7.24, IC50=0.058uM
    BindingDB: Ki=58nM
    18894 5j7p:A (1.85) BS01 6H1 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 27156768 PDBbind: -logKd/Ki=7.28, Ki=0.052uM
    18895 5j7p:A (1.85) BS02 6H1 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 27156768 PDBbind: -logKd/Ki=7.28, Ki=0.052uM
    18896 5j7p:C (1.85) BS01 6H1 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 27156768 PDBbind: -logKd/Ki=7.28, Ki=0.052uM
    18897 5j7p:C (1.85) BS02 6H1 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 27156768 PDBbind: -logKd/Ki=7.28, Ki=0.052uM
    18898 5j7q:A (2.05) BS01 6H2 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 27156768 MOAD: Ki=26.6uM
    PDBbind: -logKd/Ki=4.58, Ki=26.6uM
    BindingDB: Ki=26600nM
    18899 5j7s:A (2.368) BS01 6H3 2.7.11.25 GO:0000287 ... O43318
    Q15750    		 28011204 PDBbind: -logKd/Ki=7.30, IC50=50nM
    18900 5j7w:D (2.5) BS01 MTX 2.1.1.45 GO:0004799 ... Q834R3 27517810 MOAD: Ki=13uM
    PDBbind: -logKd/Ki=4.89, Ki=13uM
    18901 5j82:A (2.17) BS01 6GV 3.6.4.10 GO:0005524 ... P07900 29273709 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=6.00, Kd=1000nM
    18902 5j86:A (1.87) BS01 6GW 3.6.4.10 GO:0005524 ... P07900 29273709 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=8.26, Kd=5.5nM
    18903 5j87:A (1.59) BS01 N42 2.7.10.2 GO:0004672 ... Q06187 28315597 PDBbind: -logKd/Ki=8.05, Ki=8.9nM
    BindingDB: EC50=<30nM, Ki=8.9nM, IC50=7.0nM
    18904 5j8i:A (2.404) BS01 6H4 2.7.11.25 GO:0000287 ... O43318
    Q15750    		 28011204 PDBbind: -logKd/Ki=8.29, IC50=5.1nM
    18905 5j8m:A (1.9) BS01 6DL 3.6.4.10 GO:0005524 ... P07900 29273709 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=6.80, Kd=160nM
    18906 5j8m:B (1.9) BS01 6DL 3.6.4.10 GO:0005524 ... P07900 29273709 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=6.80, Kd=160nM
    18907 5j8u:A (1.75) BS01 6DL 3.6.4.10 GO:0005524 ... P07900 29273709 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=6.47, Kd=340nM
    18908 5j8u:B (1.75) BS01 6DL 3.6.4.10 GO:0005524 ... P07900 29273709 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=6.47, Kd=340nM
    18909 5j8x:A (2.53) BS01 OK3 3.4.16.4
    3.5.2.6    		 GO:0000270 ... P0AEB2 27499424 PDBbind: -logKd/Ki=8.80, IC50=0.0016uM
    18910 5j8z:A (1.7) BS02 FC4 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 27316543 MOAD: Ki=5nM
    PDBbind: -logKd/Ki=8.30, Ki=5.0nM
    18911 5j9f:A (2.1) BS02 83A 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 27458733 MOAD: Ki=59nM
    PDBbind: -logKd/Ki=7.23, Ki=59nM
    BindingDB: IC50=666nM, Ki=59nM
    18912 5j9l:A (2.7515) BS01 6HF 2.7.11.25 GO:0000287 ... O43318
    Q15750    		 28011204 PDBbind: -logKd/Ki=7.47, IC50=34nM
    18913 5j9x:A (1.8) BS01 6GC 3.6.4.10 GO:0005524 ... P07900 29273709 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=7.77, Kd=17nM
    18914 5j9y:A (2.8) BS01 6HL 2.7.10.1 GO:0004672 ... P00533 27496389 PDBbind: -logKd/Ki=7.24, Ki=58nM
    BindingDB: IC50=60nM
    18915 5j9z:A (2.5) BS01 6HJ 2.7.10.1 GO:0004672 ... P00533 27496389 PDBbind: -logKd/Ki=7.80, Ki=16nM
    BindingDB: IC50=35nM
    18916 5ja0:F (1.9) BS02 FPP 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 28098152 MOAD: Kd=5.3uM
    PDBbind: -logKd/Ki=5.22, Kd=6uM
    18917 5jah:A (2.06) BS01 6HQ 3.1.1.47 GO:0003847 ... Q13093 27167608 PDBbind: -logKd/Ki=3.00, IC50>1mM
    18918 5jal:A (2.06) BS01 6HO 3.1.1.47 GO:0003847 ... Q13093 27167608 MOAD: Kd=980uM
    PDBbind: -logKd/Ki=2.47, Kd=3400uM
    BindingDB: IC50=500000nM, Kd=980000nM
    18919 5jan:A (2.12) BS01 6HP 3.1.1.47 GO:0003847 ... Q13093 27167608 PDBbind: -logKd/Ki=3.01, Kd=980uM
    BindingDB: IC50=1000000nM
    18920 5jao:A (2.06) BS02 6HX 3.1.1.47 GO:0003847 ... Q13093 27167608 PDBbind: -logKd/Ki=4.00, IC50~100uM
    BindingDB: IC50=100000nM
    18921 5jap:A (2.46) BS01 6HZ 3.1.1.47 GO:0003847 ... Q13093 27167608 MOAD: ic50=0.23uM
    PDBbind: -logKd/Ki=6.64, IC50=0.23uM
    BindingDB: IC50=230nM
    18922 5jar:A (2.11) BS01 6HV 3.1.1.47 GO:0003847 ... Q13093 27167608 MOAD: ic50=2uM
    PDBbind: -logKd/Ki=5.70, IC50=2.0uM
    BindingDB: IC50=2000nM
    18923 5jas:A (2.06) BS01 6HW 3.1.1.47 GO:0003847 ... Q13093 27167608 MOAD: ic50=1.7uM
    PDBbind: -logKd/Ki=5.77, IC50=1.7uM
    BindingDB: IC50=1700nM
    18924 5jat:A (2.04) BS01 6HR 3.1.1.47 GO:0003847 ... Q13093 27167608 MOAD: ic50=0.23uM
    PDBbind: -logKd/Ki=6.64, IC50=0.23uM
    BindingDB: IC50=7100nM
    18925 5jau:A (1.95) BS01 6HU 3.1.1.47 GO:0003847 ... Q13093 27167608 MOAD: ic50=0.0014uM
    PDBbind: -logKd/Ki=8.85, IC50=0.0014uM
    BindingDB: IC50=18nM
    18926 5jaz:A (1.4) BS01 LC5 1.1.1.267 GO:0008299 ... Q8IKG4 27487410 MOAD: ic50=0.28uM
    PDBbind: -logKd/Ki=6.55, IC50=0.28uM
    18927 5jbi:A (1.7) BS01 6J8 1.1.1.267 GO:0008299 ... Q8IKG4 27487410 MOAD: ic50=0.12uM
    PDBbind: -logKd/Ki=6.92, IC50=0.12uM
    18928 5jc1:A (1.65) BS01 6JB 1.1.1.267 GO:0008299 ... Q8IKG4 27487410 MOAD: ic50=0.15uM
    PDBbind: -logKd/Ki=6.82, IC50=0.15uM
    18929 5jcb:A (2.3) BS04 NV4 3.6.5.- GO:0000226 ... Q2XVP4 28035796 PDBbind: -logKd/Ki=4.21, Kd=62.04uM
    18930 5jcb:B (2.3) BS02 NV4 ? GO:0000226 ... P02554 28035796 PDBbind: -logKd/Ki=4.21, Kd=62.04uM
    18931 5jcj:A (1.76) BS02 6JM ? GO:0000166 ... O76290 27411733 PDBbind: -logKd/Ki=4.42, IC50=38uM
    18932 5jcj:D (1.76) BS02 6JM ? GO:0000166 ... O76290 27411733 PDBbind: -logKd/Ki=4.42, IC50=38uM
    18933 5jdc:A (1.78) BS02 6JP ? GO:0000166 ... O76290 27411733 MOAD: ic50=104.2uM
    PDBbind: -logKd/Ki=3.98, IC50=104.2uM
    18934 5jdc:C (1.78) BS02 6JP ? GO:0000166 ... O76290 27411733 MOAD: ic50=104.2uM
    PDBbind: -logKd/Ki=3.98, IC50=104.2uM
    18935 5jdc:D (1.78) BS02 6JP ? GO:0000166 ... O76290 27411733 MOAD: ic50=104.2uM
    PDBbind: -logKd/Ki=3.98, IC50=104.2uM
    18936 5jdi:A (1.38) BS02 6JO ? GO:0000166 ... O76290 27411733 PDBbind: -logKd/Ki=5.37, IC50=4.3uM
    18937 5jdi:D (1.38) BS02 6JO ? GO:0000166 ... O76290 27411733 PDBbind: -logKd/Ki=5.37, IC50=4.3uM
    18938 5jf1:A (2.0) BS01 BB2 3.5.1.88 GO:0006412 ... Q8E378 27762275 MOAD: Ki=64nM
    PDBbind: -logKd/Ki=7.19, Ki=64nM
    18939 5jf2:A (2.0) BS01 SF7 3.5.1.88 GO:0006412 ... Q8E378 27762275 MOAD: Ki=13nM
    PDBbind: -logKd/Ki=7.89, Ki=13nM
    18940 5jf3:A (1.6) BS01 SF5 3.5.1.88 GO:0006412 ... Q8E378 27762275 MOAD: Ki=38nM
    PDBbind: -logKd/Ki=7.42, Ki=38nM
    18941 5jf4:A (2.4) BS01 6JT 3.5.1.88 GO:0006412 ... Q8E378 27762275 MOAD: Ki=65nM
    PDBbind: -logKd/Ki=7.19, Ki=65nM
    18942 5jf5:A (1.8) BS01 7JT 3.5.1.88 GO:0006412 ... Q8E378 27762275 MOAD: Ki=63nM
    PDBbind: -logKd/Ki=7.20, Ki=63nM
    18943 5jf6:A (1.7) BS01 BB4 3.5.1.88 GO:0006412 ... Q8E378 27762275 MOAD: Ki=62nM
    PDBbind: -logKd/Ki=7.21, Ki=62nM
    18944 5jf7:A (2.1) BS01 6JU 3.5.1.88 GO:0006412 ... Q8E378 27762275 MOAD: Ki=909nM
    PDBbind: -logKd/Ki=6.04, Ki=909nM
    18945 5jf8:A (1.8) BS01 PN3 3.5.1.88 GO:0006412 ... Q8E378 27762275 MOAD: Ki=1428nM
    PDBbind: -logKd/Ki=5.85, Ki=1428nM
    18946 5jfp:A (1.49) BS01 6KK 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 27389367 PDBbind: -logKd/Ki=9.32, Ki=0.48nM
    18947 5jfp:B (1.49) BS01 6KK 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 27389367 MOAD: Ki=0.48nM
    PDBbind: -logKd/Ki=9.32, Ki=0.48nM
    18948 5jfr:A (1.6) BS03 6KP 3.4.11.18 GO:0006508 ... P50579 27136719 MOAD: ic50=5nM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    18949 5jfu:A (1.7) BS01 6KQ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 27389367 PDBbind: -logKd/Ki=8.07, Ki=8.5nM
    18950 5jfu:B (1.7) BS01 6KQ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 27389367 MOAD: Ki=8.5nM
    PDBbind: -logKd/Ki=8.07, Ki=8.5nM
    18951 5jg1:A (1.16) BS01 6KR 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 27389367 PDBbind: -logKd/Ki=8.72, Ki=1.9nM
    18952 5jg1:B (1.16) BS01 6KR 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 27389367 MOAD: Ki=1.9nM
    PDBbind: -logKd/Ki=8.72, Ki=1.9nM
    18953 5jga:A (2.0) BS01 6KC 2.7.11.25 GO:0000287 ... O43318
    Q15750    		 27448772 MOAD: ic50=2.3nM
    PDBbind: -logKd/Ki=8.64, IC50=2.3nM
    18954 5jgb:A (2.8) BS01 6JV 2.7.11.25 GO:0000287 ... O43318
    Q15750    		 27448772 PDBbind: -logKd/Ki=7.89, IC50=13nM
    18955 5jgd:A (3.101) BS01 6KD 2.7.11.25 GO:0000287 ... O43318
    Q15750    		 27448772 PDBbind: -logKd/Ki=7.96, IC50=11nM
    18956 5jgi:B (1.38) BS01 AAG ? N/A O14786 29430837 PDBbind: -logKd/Ki=4.30, Kd=50uM
    18957 5jgq:B (1.6) BS01 6JY ? N/A O14786 29430837 PDBbind: -logKd/Ki=4.62, Kd=24uM
    18958 5jh0:A (2.18) BS01 dna ? N/A Q02486 27899643 PDBbind: Kd=52.1nM
    18959 5jh0:A (2.18) BS02 dna ? N/A Q02486 27899643 PDBbind: Kd=52.1nM
    18960 5jh0:A (2.18) BS03 dna ? N/A Q02486 27899643 PDBbind: Kd=52.1nM
    18961 5jh0:A (2.18) BS04 dna ? N/A Q02486 27899643 PDBbind: Kd=52.1nM
    18962 5jh0:D (2.18) BS01 dna ? N/A Q02486 27899643 PDBbind: Kd=52.1nM
    18963 5jh0:D (2.18) BS02 dna ? N/A Q02486 27899643 PDBbind: Kd=52.1nM
    18964 5jh0:D (2.18) BS03 dna ? N/A Q02486 27899643 PDBbind: Kd=52.1nM
    18965 5jh0:D (2.18) BS04 dna ? N/A Q02486 27899643 PDBbind: Kd=52.1nM
    18966 5jh6:A (2.365) BS01 T92 2.7.11.25 GO:0000287 ... O43318
    Q15750    		 28011204 PDBbind: -logKd/Ki=8.48, IC50=3.3nM
    18967 5jha:A (2.51) BS01 6K7 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 28276440 PDBbind: -logKd/Ki=5.90, Ki=1264nM
    18968 5jhb:A (2.48) BS01 6K5 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 28276440 MOAD: Kd=873nM
    PDBbind: -logKd/Ki=6.06, Kd=873nM
    18969 5jhk:A (1.8) BS01 6K8 ? N/A O14786 29430837 PDBbind: -logKd/Ki=4.64, Kd=23uM
    18970 5ji6:A (2.15) BS03 6KN 3.4.11.18 GO:0006508 ... P50579 27155900 MOAD: ic50=0.011uM
    PDBbind: -logKd/Ki=7.96, IC50=0.011uM
    18971 5ji8:A (1.42) BS01 6KT ? N/A Q9H8M2 27194508 MOAD: Kd=23.4uM
    PDBbind: -logKd/Ki=4.63, Kd=23.4uM
    18972 5jic:A (1.4) BS02 N7E 2.7.1.33 GO:0004594 ... Q2FWC7 27759386 MOAD: ic50=0.13uM
    PDBbind: -logKd/Ki=6.89, IC50=0.13uM
    18973 5jid:A (1.2) BS01 8PF ? GO:0005179 ... P02766 27668830 PDBbind: -logKd/Ki=3.76, IC50=175uM
    18974 5jid:B (1.2) BS01 8PF ? GO:0005179 ... P02766 27668830 PDBbind: -logKd/Ki=3.76, IC50=175uM
    18975 5jim:A (1.26) BS01 P8S ? GO:0005179 ... P02766 27668830 PDBbind: -logKd/Ki=3.99, IC50=103uM
    18976 5jim:B (1.26) BS01 P8S ? GO:0005179 ... P02766 27668830 PDBbind: -logKd/Ki=3.99, IC50=103uM
    18977 5jiq:A (1.45) BS01 27M ? GO:0005179 ... P02766 27668830 PDBbind: -logKd/Ki=5.40, IC50=4uM
    18978 5jiq:B (1.45) BS01 27M ? GO:0005179 ... P02766 27668830 PDBbind: -logKd/Ki=5.40, IC50=4uM
    18979 5jjr:A (1.99) BS04 68E 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13    		 GO:0003968 ... Q6YMS4 27500641 MOAD: ic50=0.016uM
    PDBbind: -logKd/Ki=7.80, IC50=0.016uM
    18980 5jjs:A (1.65) BS03 6L2 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13    		 GO:0003968 ... Q6YMS4 27500641 MOAD: ic50=0.048uM
    PDBbind: -logKd/Ki=7.32, IC50=0.048uM
    18981 5jk0:A (2.1) BS01 dna ? GO:0003677 ... O25386 28009253 PDBbind: Kd=150nM
    18982 5jk0:A (2.1) BS02 dna ? GO:0003677 ... O25386 28009253 PDBbind: Kd=150nM
    18983 5jk0:B (2.1) BS01 dna ? GO:0003677 ... O25386 28009253 PDBbind: Kd=150nM
    18984 5jk0:B (2.1) BS02 dna ? GO:0003677 ... O25386 28009253 PDBbind: Kd=150nM
    18985 5jk0:C (2.1) BS01 dna ? GO:0003677 ... O25386 28009253 PDBbind: Kd=150nM
    18986 5jk0:C (2.1) BS02 dna ? GO:0003677 ... O25386 28009253 PDBbind: Kd=150nM
    18987 5jk0:D (2.1) BS01 dna ? GO:0003677 ... O25386 28009253 PDBbind: Kd=150nM
    18988 5jk0:D (2.1) BS02 dna ? GO:0003677 ... O25386 28009253 PDBbind: Kd=150nM
    18989 5jk3:A (2.371) BS01 6L4 2.7.11.25 GO:0000287 ... O43318
    Q15750    		 28011204 PDBbind: -logKd/Ki=8.14, IC50=7.3nM
    18990 5jlt:A (2.955) BS01 dna ? N/A P22915 29718457 PDBbind: Kd=93nM
    18991 5jlt:A (2.955) BS02 dna ? N/A P22915 29718457 PDBbind: Kd=93nM
    18992 5jlt:B (2.955) BS01 dna ? N/A P22915 29718457 PDBbind: Kd=93nM
    18993 5jlt:B (2.955) BS02 dna ? N/A P22915 29718457 PDBbind: Kd=93nM
    18994 5jlt:C (2.955) BS01 dna ? N/A P22915 29718457 PDBbind: Kd=93nM
    18995 5jlt:C (2.955) BS02 dna ? N/A P22915 29718457 PDBbind: Kd=93nM
    18996 5jlt:D (2.955) BS01 dna ? N/A P22915 29718457 PDBbind: Kd=93nM
    18997 5jlt:D (2.955) BS02 dna ? N/A P22915 29718457 PDBbind: Kd=93nM
    18998 5jlw:A (2.088) BS01 dna ? GO:0000981 ... P02833 27271797 PDBbind: Kd=3nM
    18999 5jlw:A (2.088) BS02 dna ? GO:0000981 ... P02833 27271797 PDBbind: Kd=3nM
    19000 5jlw:D (2.088) BS01 dna ? GO:0000981 ... P02833 27271797 PDBbind: Kd=3nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218