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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    18001 5ely:A (1.81) BS04 5PU 3.4.17.21 GO:0004180 ... Q04609 27074627 MOAD: ic50=44nM
    PDBbind: -logKd/Ki=7.36, IC50=44nM
    BindingDB: IC50=44nM
    18002 5elz:A (1.8) BS02 3V9 2.7.1.33 GO:0004594 ... Q2FWC7 27759386 PDBbind: -logKd/Ki=6.34, IC50=0.46uM
    18003 5em3:A (1.4) BS01 5Q0 ? N/A P55201 27167503 PDBbind: -logKd/Ki=3.70, Kd>200uM
    BindingDB: Kd=>200000nM
    18004 5em3:A (1.4) BS02 5Q0 ? N/A P55201 27167503 PDBbind: -logKd/Ki=3.70, Kd>200uM
    BindingDB: Kd=>200000nM
    18005 5em5:A (2.65) BS01 5Q2 2.7.10.1 GO:0004672 ... P00533 26819674 PDBbind: -logKd/Ki=6.58, Ki=0.262uM
    BindingDB: Ki=37nM
    18006 5em6:A (2.78) BS01 5Q3 2.7.10.1 GO:0004672 ... P00533 26819674 PDBbind: -logKd/Ki=8.40, Ki=0.004uM
    BindingDB: Ki=850nM
    18007 5em7:A (2.81) BS01 5Q4 2.7.10.1 GO:0004672 ... P00533 26819674 PDBbind: -logKd/Ki=7.72, Ki=0.019uM
    BindingDB: Ki=1090nM
    18008 5em8:A (2.8) BS01 5Q4 2.7.10.1 GO:0004672 ... P00533 26819674 PDBbind: -logKd/Ki=5.96, Ki=1.090uM
    BindingDB: Ki=1090nM
    18009 5emj:A (2.273) BS02 5QJ 2.1.1.320 GO:0000387 ... O14744 26985292 MOAD: ic50=33nM
    PDBbind: -logKd/Ki=7.48, IC50=33nM
    BindingDB: IC50=<100nM
    18010 5emk:A (2.52) BS02 5QH 2.1.1.320 GO:0000387 ... O14744 26985292 PDBbind: -logKd/Ki=7.89, IC50=13nM
    BindingDB: IC50=<100nM
    18011 5eml:A (2.39) BS02 5QK 2.1.1.320 GO:0000387 ... O14744 26985292 MOAD: ic50=23nM
    PDBbind: -logKd/Ki=7.64, IC50=23nM
    BindingDB: IC50=<100nM
    18012 5emm:A (2.37) BS02 5QL 2.1.1.320 GO:0000387 ... O14744 26985292 PDBbind: -logKd/Ki=7.74, IC50=18nM
    BindingDB: IC50=<100nM
    18013 5en1:A (2.58) BS01 rna ? GO:0003676 ... P22626 N/A PDBbind: Kd=276.2nM
    18014 5en3:A (1.25) BS01 7LU ? GO:0005179 ... P02766 27050398 MOAD: Kd=620nM
    PDBbind: -logKd/Ki=6.21, Kd=620nM
    18015 5en3:B (1.25) BS01 7LU ? GO:0005179 ... P02766 27050398 MOAD: Kd=620nM
    PDBbind: -logKd/Ki=6.21, Kd=620nM
    18016 5enb:A (1.73) BS01 5Q5 ? N/A Q8WWQ0 29910922 PDBbind: -logKd/Ki=3.11, IC50=0.78mM
    18017 5enc:A (1.59) BS01 5QD ? N/A Q8WWQ0 29910922 PDBbind: -logKd/Ki=2.30, IC50>5mM
    18018 5ene:A (1.49) BS01 5Q8 ? N/A Q8WWQ0 29910922 PDBbind: -logKd/Ki=3.23, IC50=0.59mM
    18019 5enf:A (1.37) BS01 5Q7 ? N/A Q8WWQ0 29910922 PDBbind: -logKd/Ki=3.57, IC50=0.27mM
    18020 5eng:A (1.3) BS01 5QN 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92793 30258543 PDBbind: -logKd/Ki=5.85, Kd=1.4uM
    18021 5enh:A (1.95) BS01 5QB ? N/A Q8WWQ0 29910922 PDBbind: -logKd/Ki=3.72, IC50=0.19mM
    18022 5eni:A (1.69) BS01 5QA ? N/A Q8WWQ0 29910922 PDBbind: -logKd/Ki=2.30, IC50>5mM
    18023 5enj:A (1.63) BS01 5Q9 ? N/A Q8WWQ0 29910922 PDBbind: -logKd/Ki=2.30, IC50>5mM
    18024 5enk:A (2.11) BS01 5QV 3.4.23.46 GO:0004190 ... P56817 26985314 MOAD: ic50=8nM
    PDBbind: -logKd/Ki=8.10, IC50=8nM
    BindingDB: IC50=8.0nM
    18025 5enm:A (1.98) BS01 5QU 3.4.23.46 GO:0004190 ... P56817 26985314 MOAD: ic50=70nM
    PDBbind: -logKd/Ki=7.15, IC50=70nM
    18026 5eob:A (1.75) BS01 5QQ 2.7.10.1 GO:0004672 ... P08581 27061987 MOAD: ic50=0.24nM
    PDBbind: -logKd/Ki=9.62, IC50=0.24nM
    BindingDB: IC50=0.850000nM
    18027 5eol:A (2.2) BS01 5QO 2.7.11.1 GO:0004672 ... P11309 27096050 MOAD: ic50=0.3nM
    PDBbind: -logKd/Ki=9.52, IC50=0.3nM
    BindingDB: IC50=0.300000nM
    18028 5eom:A (2.55) BS01 CTP 2.7.7.- GO:0001654 ... Q13394 27271801 PDBbind: -logKd/Ki=6.39, Kd=0.41uM
    18029 5eou:B (2.4) BS01 ATP ? GO:0005524 ... G3XD28
    G3XD30    		 27022027 MOAD: Kd=4.37uM
    PDBbind: -logKd/Ki=5.36, Kd=4.37uM
    18030 5ep7:A (1.198) BS01 5QR 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92793 30258543 PDBbind: -logKd/Ki=5.40, Kd=4uM
    BindingDB: Kd=4000nM
    18031 5epn:A (2.3) BS02 5R2 3.6.4.13 GO:0006508 ... C1KIK8 26682473 MOAD: Kd=2.2nM
    PDBbind: -logKd/Ki=8.66, Kd=2.2nM
    18032 5epr:A (1.65) BS01 5QY ? N/A P55201 27167503 MOAD: Kd=91uM
    PDBbind: -logKd/Ki=4.04, Kd=91uM
    BindingDB: Kd=91000nM
    18033 5eps:A (1.47) BS01 5QX ? N/A P55201 27167503 MOAD: Kd=38uM
    PDBbind: -logKd/Ki=4.42, Kd=38uM
    BindingDB: Kd=38000nM
    18034 5epy:A (2.3) BS02 5R2 3.6.4.13 GO:0006508 ... C1KIK8 26682473 PDBbind: -logKd/Ki=7.40, Kd=39.9nM
    18035 5eq1:A (1.55) BS01 BEA ? N/A P55201 27167503 MOAD: Kd=21uM
    PDBbind: -logKd/Ki=4.68, Kd=21uM
    18036 5eqe:A (2.4) BS01 5R8 2.7.1.32
    2.7.1.82    		 N/A P35790 26700752 MOAD: Kd=132uM
    PDBbind: -logKd/Ki=3.88, Kd=132uM
    BindingDB: Kd=132000nM, IC50=87000nM
    18037 5eqp:A (2.35) BS01 5R9 2.7.1.32
    2.7.1.82    		 N/A P35790 26700752 MOAD: Kd=4uM
    PDBbind: -logKd/Ki=5.40, Kd=4uM
    BindingDB: Kd=4000nM, IC50=3900nM
    18038 5eqq:A (1.65) BS02 5RS 3.6.4.13 GO:0006508 ... C1KIK8 26682473 MOAD: Kd=6.7nM
    PDBbind: -logKd/Ki=8.17, Kd=6.7nM
    18039 5eqy:A (2.5) BS01 5RA 2.7.1.32
    2.7.1.82    		 N/A P35790 26700752 MOAD: Kd=10nM
    PDBbind: -logKd/Ki=8.00, Kd=10nM
    BindingDB: IC50=66nM, Kd=10.0nM
    18040 5er1:E (2.0) BS01 0HT 3.4.23.22 GO:0004190 ... P11838 N/A MOAD: Ki=960nM
    PDBbind: -logKd/Ki=6.02, Ki=960nM
    18041 5er2:E (1.8) BS01 0EK 3.4.23.22 GO:0004190 ... P11838 2676515 MOAD: Ki=0.27uM
    PDBbind: -logKd/Ki=6.57, Ki=0.27uM
    18042 5er4:X (1.813) BS03 5RL ? GO:0005509 ... P02638 27303795 PDBbind: -logKd/Ki=2.76, Kd=1752uM
    18043 5er5:A (1.26) BS03 ET ? GO:0005509 ... P02638 27303795 PDBbind: -logKd/Ki=3.67, Kd=215.4uM
    18044 5erg:B (2.202) BS01 SAM 2.1.1.220 GO:0005515 ... P46959 27582183 MOAD: Kd=44.33uM
    PDBbind: -logKd/Ki=4.35, Kd=44.33uM
    18045 5es1:A (2.8) BS01 5RC 2.7.11.1 GO:0004672 ... Q96L34 26841763 PDBbind: -logKd/Ki=8.34, IC50=4.6nM
    18046 5est:E (2.09) BS01 0P2 3.4.21.36 GO:0004252 ... P00772 2611205 PDBbind: -logKd/Ki=6.52, Ki=0.3uM
    18047 5etb:A (1.33) BS01 5RO ? N/A P55201 27167503 MOAD: Kd=29uM
    PDBbind: -logKd/Ki=4.54, Kd=29uM
    BindingDB: Kd=29000nM
    18048 5eth:A (2.803) BS01 5RT ? GO:0003677 ... P51449 27080181 PDBbind: -logKd/Ki=7.25, IC50=0.056uM
    BindingDB: IC50=56nM
    18049 5etj:A (2.3) BS01 IM5 2.4.2.1 GO:0000255 ... P00491 26927977 MOAD: Kd=66pM
    PDBbind: -logKd/Ki=10.18, Ki=66pM
    BindingDB: Ki=7nM
    18050 5etj:B (2.3) BS01 IM5 2.4.2.1 GO:0000255 ... P00491 26927977 MOAD: Kd=66pM
    PDBbind: -logKd/Ki=10.18, Ki=66pM
    BindingDB: Ki=7nM
    18051 5etk:A (1.09) BS02 5RU 2.7.6.3 GO:0000287 ... P26281 27094768 MOAD: Kd=1.5uM
    PDBbind: -logKd/Ki=5.82, Kd=1.5uM
    18052 5etl:A (1.82) BS05 5RV 2.7.6.3 GO:0000287 ... P26281 27094768 MOAD: Kd=23uM
    PDBbind: -logKd/Ki=4.64, Kd=23uM
    18053 5etm:A (1.46) BS01 5RW 2.7.6.3 GO:0000287 ... P26281 27094768 MOAD: Kd=3.9uM
    PDBbind: -logKd/Ki=5.41, Kd=3.9uM
    18054 5etn:A (1.4) BS06 5RX 2.7.6.3 GO:0000287 ... P26281 27094768 MOAD: Kd=4.3uM
    PDBbind: -logKd/Ki=5.37, Kd=4.3uM
    18055 5eto:A (1.07) BS01 5RY 2.7.6.3 GO:0000287 ... P26281 27094768 MOAD: Kd=2.7uM
    PDBbind: -logKd/Ki=5.57, Kd=2.7uM
    BindingDB: Kd=2700nM
    18056 5etp:A (1.05) BS06 5RZ 2.7.6.3 GO:0000287 ... P26281 27094768 MOAD: Kd=0.7uM
    PDBbind: -logKd/Ki=6.15, Kd=0.7uM
    BindingDB: Kd=700nM
    18057 5etq:A (1.96) BS04 YH2 2.7.6.3 GO:0003848 ... Q2G0Q5 27094768 MOAD: Kd=0.33uM
    PDBbind: -logKd/Ki=6.48, Kd=0.33uM
    18058 5etr:B (1.32) BS02 5RW 2.7.6.3 GO:0003848 ... Q2G0Q5 27094768 MOAD: Kd=0.3uM
    PDBbind: -logKd/Ki=6.52, Kd=0.30uM
    18059 5ets:B (1.95) BS02 5RX 2.7.6.3 GO:0003848 ... Q2G0Q5 27094768 MOAD: Kd=1.24uM
    PDBbind: -logKd/Ki=5.91, Kd=1.24uM
    18060 5ett:B (1.55) BS02 5RY 2.7.6.3 GO:0003848 ... Q2G0Q5 27094768 MOAD: Kd=0.59uM
    PDBbind: -logKd/Ki=6.23, Kd=0.59uM
    18061 5etv:A (1.72) BS02 5RZ 2.7.6.3 GO:0003848 ... Q2G0Q5 27094768 MOAD: Kd=0.57uM
    PDBbind: -logKd/Ki=6.24, Kd=0.57uM
    18062 5etx:A (2.35) BS02 5RS 3.6.4.13 GO:0006508 ... C1KIK8 26682473 PDBbind: -logKd/Ki=6.81, Kd=154.3nM
    18063 5etx:A (2.35) BS03 5RS 3.6.4.13 GO:0006508 ... C1KIK8 26682473 PDBbind: -logKd/Ki=6.81, Kd=154.3nM
    18064 5ety:A (2.9) BS02 K56 2.4.2.-
    2.4.2.30    		 GO:0003950 ... O95271 27196752 PDBbind: -logKd/Ki=7.51, IC50=31nM
    BindingDB: IC50=31nM
    18065 5eu1:A (1.6) BS01 5SW ? N/A Q9H8M2 26914985 MOAD: Kd=15.4nM
    PDBbind: -logKd/Ki=7.81, Kd=15.4nM
    BindingDB: Kd=0.794328nM, IC50=19nM
    18066 5eud:A (2.24) BS01 5S6 ? GO:0004058 ... Q67PY4 27013389 MOAD: ic50=0.15uM
    PDBbind: -logKd/Ki=6.82, IC50=0.15uM
    18067 5eud:A (2.24) BS02 5S6 ? GO:0004058 ... Q67PY4 27013389 MOAD: ic50=0.15uM
    PDBbind: -logKd/Ki=6.82, IC50=0.15uM
    18068 5eud:B (2.24) BS01 5S6 ? GO:0004058 ... Q67PY4 27013389 PDBbind: -logKd/Ki=6.82, IC50=0.15uM
    18069 5eud:B (2.24) BS02 5S6 ? GO:0004058 ... Q67PY4 27013389 PDBbind: -logKd/Ki=6.82, IC50=0.15uM
    18070 5eue:A (2.83) BS01 5S5 ? GO:0004058 ... Q67PY4 27013389 PDBbind: -logKd/Ki=6.77, IC50=0.17uM
    18071 5eue:A (2.83) BS02 5S5 ? GO:0004058 ... Q67PY4 27013389 PDBbind: -logKd/Ki=6.77, IC50=0.17uM
    18072 5eue:B (2.83) BS01 5S5 ? GO:0004058 ... Q67PY4 27013389 PDBbind: -logKd/Ki=6.77, IC50=0.17uM
    18073 5eue:B (2.83) BS02 5S5 ? GO:0004058 ... Q67PY4 27013389 PDBbind: -logKd/Ki=6.77, IC50=0.17uM
    18074 5ev8:A (2.3) BS03 3R9 3.5.2.6 GO:0008270 ... P52699 27303030 PDBbind: -logKd/Ki=5.22, Ki=6uM
    18075 5ev8:A (2.3) BS04 3R9 3.5.2.6 GO:0008270 ... P52699 27303030 PDBbind: -logKd/Ki=5.22, Ki=6uM
    18076 5eva:A (1.45) BS01 5S9 ? N/A P55201 27167503 PDBbind: -logKd/Ki=3.70, Kd>200uM
    BindingDB: Kd=>200000nM
    18077 5evb:A (1.841) BS03 3R9 3.5.2.6 GO:0008270 ... P52700 27303030 MOAD: Ki=10uM
    PDBbind: -logKd/Ki=5.00, Ki=10uM
    18078 5evd:A (1.8) BS01 VC2 3.5.2.6 GO:0008270 ... P52700 27303030 MOAD: Ki=10uM
    PDBbind: -logKd/Ki=5.00, Ki=10uM
    18079 5evk:A (1.627) BS01 3C7 3.5.2.6 GO:0008270 ... P52700 27303030 MOAD: Ki=12uM
    PDBbind: -logKd/Ki=4.92, Ki=12uM
    18080 5evz:A (1.85) BS02 ADP 3.6.4.10 GO:0005524 ... P11021 27144892 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=6.57, Kd=270nM
    18081 5ew0:A (1.3) BS02 3C7 3.5.2.6 GO:0008270 ... Q9RMI1 27303030 MOAD: Ki=0.26uM
    PDBbind: -logKd/Ki=6.59, Ki=0.26uM
    18082 5ew3:A (2.5) BS01 5T2 2.7.10.1 GO:0004672 ... P35968 26629594 MOAD: ic50=0.0012uM
    PDBbind: -logKd/Ki=8.92, IC50=0.0012uM
    BindingDB: IC50=23nM
    18083 5ew9:A (2.181) BS01 5VC 2.7.11.1 GO:0000212 ... O14965 26732741 MOAD: Ki<0.01nM
    PDBbind: -logKd/Ki=11.00, Ki<0.01nM
    BindingDB: IC50=0.064000nM
    18084 5ewa:A (2.3) BS03 9BZ 3.5.2.6 GO:0008270 ... P52699 27303030 MOAD: Ki=15uM
    PDBbind: -logKd/Ki=4.82, Ki=15uM
    18085 5ewd:A (1.58) BS01 5SH ? N/A P55201 27167503 PDBbind: -logKd/Ki=3.70, Kd>200uM
    BindingDB: Kd=>200000nM
    18086 5ewh:A (1.63) BS01 5SG ? N/A P55201 27167503 MOAD: Kd=170uM
    PDBbind: -logKd/Ki=3.77, Kd=170uM
    BindingDB: Kd=170000nM
    18087 5ewj:A (2.77) BS01 QEL ? GO:0004930 ... A0A1L8F5J9 26912815 PDBbind: -logKd/Ki=6.89, IC50=130nM
    18088 5ewj:B (2.77) BS01 QEL ? N/A Q13224 26912815 PDBbind: -logKd/Ki=6.89, IC50=130nM
    BindingDB: Ki=10.0nM, Kd=7.6nM, IC50=110nM
    18089 5ewk:A (1.6) BS01 P34 2.4.2.31 N/A C9Z6T8 27002155 MOAD: Kd=14uM
    PDBbind: -logKd/Ki=4.85, Kd=14uM
    18090 5ewm:A (2.76) BS01 5SM ? GO:0004930 ... A0A1L8F5J9 26912815 PDBbind: -logKd/Ki=7.92, IC50=12nM
    18091 5ewm:B (2.76) BS01 5SM ? N/A Q13224 26912815 PDBbind: -logKd/Ki=7.92, IC50=12nM
    BindingDB: IC50=12nM
    18092 5ewy:A (1.4) BS01 5TQ 2.4.2.31 N/A C9Z6T8 27002155 MOAD: Kd=50uM
    PDBbind: -logKd/Ki=4.30, Kd=50uM
    18093 5exh:C (1.3) BS01 dna 1.14.11.80 GO:0003677 ... Q8BG87 26774490 PDBbind: Kd=0.56uM
    18094 5exh:C (1.3) BS02 dna 1.14.11.80 GO:0003677 ... Q8BG87 26774490 PDBbind: Kd=0.56uM
    18095 5exl:A (2.3) BS01 5SS 3.4.21.27 GO:0004252 ... P03951 27073051 MOAD: Ki=3.7nM
    PDBbind: -logKd/Ki=8.43, Ki=3.7nM
    BindingDB: Ki=3.7nM
    18096 5exm:A (2.09) BS01 5ST 3.4.21.27 GO:0004252 ... P03951 27073051 MOAD: Ki=6.3nM
    PDBbind: -logKd/Ki=8.20, Ki=6.3nM
    BindingDB: Ki=6.3nM
    18097 5exn:A (1.49) BS01 5SU 3.4.21.27 GO:0004252 ... P03951 27073051 MOAD: Ki=23nM
    PDBbind: -logKd/Ki=7.64, Ki=23nM
    BindingDB: Ki=23nM
    18098 5exw:A (1.9) BS01 7DT 3.6.4.10 GO:0005524 ... P11021 27144892 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=6.82, Kd=150nM
    18099 5exx:A (3.311) BS01 C2E ? GO:0005524 ... G3XCV0 26712005 PDBbind: -logKd/Ki=5.39, Kd=4.1uM
    18100 5exx:A (3.311) BS02 C2E ? GO:0005524 ... G3XCV0 26712005 PDBbind: -logKd/Ki=5.39, Kd=4.1uM
    18101 5ey0:A (1.6) BS02 GTP ? GO:0003677 ... A7X1N2 27596595 MOAD: Kd=2.26mM
    PDBbind: -logKd/Ki=2.65, Kd=2.26mM
    18102 5ey4:A (1.86) BS01 DTP 3.6.4.10 GO:0005524 ... P11021 27144892 MOAD: Kd=0.00075M
    PDBbind: -logKd/Ki=3.12, Kd=750uM
    18103 5ey8:A (3.5) BS01 5SV 6.2.1.20 GO:0005524 ... A0R618 26900152 PDBbind: -logKd/Ki=6.31, IC50=0.49uM
    18104 5ey9:A (2.5) BS01 5SV 6.2.1.20 GO:0005524 ... B2HMK0 26900152 MOAD: Kd=3.87uM
    PDBbind: -logKd/Ki=5.41, Kd=3.87uM
    18105 5eyc:A (1.8) BS01 5SZ 2.7.10.1 GO:0004672 ... P08581 26812066 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3nM
    18106 5eyd:A (1.85) BS01 5T1 2.7.10.1 GO:0004672 ... P08581 26812066 MOAD: ic50=1nM
    PDBbind: -logKd/Ki=9.00, IC50=1nM
    BindingDB: IC50=1nM
    18107 5eyk:A (1.93) BS02 5U5 2.7.11.1 GO:0004672 ... Q6DE08 27496137 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    18108 5eym:A (2.7) BS01 5U5 2.7.12.2 GO:0000165 ... Q02750 27496137 PDBbind: -logKd/Ki=7.60, IC50=25nM
    BindingDB: IC50=25nM
    18109 5eyo:A (2.39) BS01 dna ? GO:0046983 ... P61244 27903915 PDBbind: Kd=31nM
    18110 5eyo:C (2.39) BS01 dna ? GO:0046983 ... P61244 27903915 PDBbind: Kd=31nM
    18111 5eyr:A (1.57) BS01 5T0 ? GO:0000976 ... P9WMC1 26806381 MOAD: Kd=5uM
    PDBbind: -logKd/Ki=5.30, Kd=5uM
    18112 5ezg:A (1.84) BS01 5T4 ? GO:0000976 ... P9WMC1 26806381 MOAD: Kd=12uM
    PDBbind: -logKd/Ki=4.92, Kd=12uM
    18113 5ezg:A (1.84) BS02 5T4 ? GO:0000976 ... P9WMC1 26806381 MOAD: Kd=12uM
    PDBbind: -logKd/Ki=4.92, Kd=12uM
    18114 5ezh:A (1.7) BS01 841 ? GO:0000976 ... P9WMC1 26806381 MOAD: Kd=24uM
    PDBbind: -logKd/Ki=4.62, Kd=24uM
    18115 5ezh:A (1.7) BS02 841 ? GO:0000976 ... P9WMC1 26806381 MOAD: Kd=24uM
    PDBbind: -logKd/Ki=4.62, Kd=24uM
    18116 5ezx:A (1.9) BS01 5T5 3.4.23.46 GO:0004190 ... P56817 26878596 MOAD: ic50=87nM
    PDBbind: -logKd/Ki=7.06, IC50=87nM
    18117 5ezz:A (2.1) BS01 5T6 3.4.23.46 GO:0004190 ... P56817 26878596 MOAD: ic50=145nM
    PDBbind: -logKd/Ki=6.84, IC50=145nM
    18118 5f00:A (1.95) BS01 5T8 3.4.23.46 GO:0004190 ... P56817 26878596 MOAD: ic50=250nM
    PDBbind: -logKd/Ki=6.60, IC50=250nM
    BindingDB: IC50=250nM
    18119 5f01:A (1.52) BS01 5T7 3.4.23.46 GO:0004190 ... P56817 26878596 MOAD: ic50=420nM
    PDBbind: -logKd/Ki=6.38, IC50=420nM
    18120 5f02:A (1.43) BS01 5T9 3.4.22.15 GO:0006508 ... P07711 26878596 PDBbind: -logKd/Ki=7.44, IC50=36nM
    18121 5f04:A (1.84) BS01 5TB ? GO:0000976 ... P9WMC1 26806381 PDBbind: -logKd/Ki=4.00, IC50>100uM
    18122 5f08:A (1.92) BS01 5TG ? GO:0000976 ... P9WMC1 26806381 MOAD: Kd=3uM
    PDBbind: -logKd/Ki=5.52, Kd=3uM
    18123 5f0c:A (1.87) BS01 5TE ? GO:0000976 ... P9WMC1 26806381 PDBbind: -logKd/Ki=4.00, IC50>100uM
    18124 5f0f:A (1.76) BS01 5TD ? GO:0000976 ... P9WMC1 26806381 MOAD: Kd=1uM
    PDBbind: -logKd/Ki=6.00, Kd=1uM
    18125 5f0h:A (1.99) BS01 5TC ? GO:0000976 ... P9WMC1 26806381 MOAD: ic50=33uM
    PDBbind: -logKd/Ki=4.48, IC50=33uM
    18126 5f1c:A (2.9) BS02 ATP ? GO:0001614 ... G3MM57 26804916 PDBbind: -logKd/Ki=6.13, Kd=0.745uM
    18127 5f1c:A (2.9) BS03 ATP ? GO:0001614 ... G3MM57 26804916 PDBbind: -logKd/Ki=6.13, Kd=0.745uM
    18128 5f1c:B (2.9) BS01 ATP ? GO:0001614 ... G3MM57 26804916 PDBbind: -logKd/Ki=6.13, Kd=0.745uM
    18129 5f1c:B (2.9) BS04 ATP ? GO:0001614 ... G3MM57 26804916 PDBbind: -logKd/Ki=6.13, Kd=0.745uM
    18130 5f1h:A (1.82) BS01 5U6 ? N/A Q9H8M2 26914985 MOAD: Kd=14.1nM
    PDBbind: -logKd/Ki=7.85, Kd=14.1nM
    BindingDB: Kd=47nM, IC50=75nM
    18131 5f1j:A (1.631) BS01 5TO ? GO:0000976 ... P9WMC1 26806381 MOAD: Kd=12uM
    PDBbind: -logKd/Ki=4.92, Kd=12uM
    BindingDB: Kd=1.2e+4nM
    18132 5f1j:A (1.631) BS02 5TO ? GO:0000976 ... P9WMC1 26806381 MOAD: Kd=12uM
    PDBbind: -logKd/Ki=4.92, Kd=12uM
    BindingDB: Kd=1.2e+4nM
    18133 5f1l:A (2.3) BS01 5U2 ? N/A Q9H8M2 26914985 MOAD: ic50=21nM
    PDBbind: -logKd/Ki=7.68, IC50=21nM
    BindingDB: IC50=21nM
    18134 5f1r:A (2.25) BS01 42O ? GO:0003677 ... P22262 26991105 MOAD: Kd=1uM
    PDBbind: -logKd/Ki=6.00, Kd=1uM
    BindingDB: IC50=4500nM
    18135 5f1r:A (2.25) BS02 42O ? GO:0003677 ... P22262 26991105 MOAD: Kd=1uM
    PDBbind: -logKd/Ki=6.00, Kd=1uM
    BindingDB: IC50=4500nM
    18136 5f1r:B (2.25) BS01 42O ? GO:0003677 ... P22262 26991105 MOAD: Kd=1uM
    PDBbind: -logKd/Ki=6.00, Kd=1uM
    BindingDB: IC50=4500nM
    18137 5f1u:A (2.35) BS01 3VN 4.3.3.7 GO:0005737 ... Q9PPB4 26836694 MOAD: ic50=400nM
    PDBbind: -logKd/Ki=6.40, IC50=400nM
    18138 5f1u:B (2.35) BS01 3VN 4.3.3.7 GO:0005737 ... Q9PPB4 26836694 PDBbind: -logKd/Ki=6.40, IC50=400nM
    18139 5f1v:A (2.2) BS01 3VN 4.3.3.7 GO:0005737 ... Q9PPB4 26836694 MOAD: Ki~200nM
    PDBbind: -logKd/Ki=6.85, Ki=140nM
    18140 5f1v:A (2.2) BS02 3VN 4.3.3.7 GO:0005737 ... Q9PPB4 26836694 MOAD: Ki~200nM
    PDBbind: -logKd/Ki=6.85, Ki=140nM
    18141 5f1x:A (1.9) BS01 ATP 3.6.4.10 GO:0005524 ... P11021 27144892 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=6.11, Kd=780nM
    18142 5f1z:A (2.65) BS01 5U3 2.7.10.2 GO:0004672 ... P29597 26701356 PDBbind: -logKd/Ki=8.68, IC50=2.1nM
    18143 5f20:A (2.91) BS01 5U4 2.7.10.2 GO:0004672 ... P29597 26701356 PDBbind: -logKd/Ki=7.52, IC50=30nM
    BindingDB: IC50=30nM
    18144 5f25:A (1.68) BS01 5TU ? N/A Q9H8M2 26914985 MOAD: Kd=9.1uM
    PDBbind: -logKd/Ki=5.04, Kd=9.1uM
    BindingDB: Kd=9100nM, IC50=9338nM
    18145 5f27:A (1.684) BS01 5TT ? GO:0000976 ... P9WMC1 26806381 PDBbind: -logKd/Ki=4.00, IC50>100uM
    18146 5f27:A (1.684) BS02 5TT ? GO:0000976 ... P9WMC1 26806381 PDBbind: -logKd/Ki=4.00, IC50>100uM
    18147 5f29:A (1.821) BS01 2BA ? GO:0006813 ... Q2FZQ4 26171638 PDBbind: -logKd/Ki=5.05, Kd~9uM
    18148 5f29:B (1.821) BS01 2BA ? GO:0006813 ... Q2FZQ4 26171638 PDBbind: -logKd/Ki=5.05, Kd~9uM
    18149 5f2f:A (1.665) BS01 5U7 ? GO:0007155 ... P08191 26812660 PDBbind: -logKd/Ki=6.92, IC50=0.12uM
    18150 5f2k:A (1.6) BS01 SAH ? GO:0008168 ... B2HHT4 26526103 PDBbind: -logKd/Ki=6.16, Kd=697nM
    18151 5f2p:A (1.8) BS01 5TY ? N/A Q9H8M2 26914985 MOAD: Kd=37.5uM
    PDBbind: -logKd/Ki=4.43, Kd=37.5uM
    BindingDB: Kd=37500nM, IC50=48900nM
    18152 5f2r:A (2.15) BS01 ACP 3.6.4.10 GO:0005524 ... P11021 27144892 MOAD: Kd=0.000052M
    PDBbind: -logKd/Ki=4.28, Kd=52uM
    18153 5f2s:A (2.08) BS03 5TZ 1.14.11.66
    1.14.11.69    		 N/A O75164 26741168 MOAD: ic50=0.2uM
    PDBbind: -logKd/Ki=6.70, IC50=0.2uM
    BindingDB: IC50=200nM
    18154 5f2u:A (1.85) BS02 FAR ? GO:0005095 ... O43924 27063844 PDBbind: -logKd/Ki=8.43, Kd=3.7nM
    18155 5f2w:A (2.6) BS03 5UP 1.14.11.66
    1.14.11.69    		 N/A O75164 26741168 PDBbind: -logKd/Ki=3.98, IC50=104.2uM
    BindingDB: IC50=104200nM
    18156 5f32:A (2.05) BS03 5V7 1.14.11.66
    1.14.11.69    		 N/A O75164 26741168 MOAD: ic50=11.5uM
    PDBbind: -logKd/Ki=4.94, IC50=11.5uM
    BindingDB: IC50=11500nM
    18157 5f37:A (2.22) BS03 N5J 1.14.11.66
    1.14.11.69    		 N/A O75164 26741168 MOAD: ic50=1.7uM
    PDBbind: -logKd/Ki=5.77, IC50=1.7uM
    BindingDB: IC50=1700nM
    18158 5f39:A (2.65) BS03 5UB 1.14.11.66
    1.14.11.69    		 N/A O75164 26741168 PDBbind: -logKd/Ki=5.10, IC50=8uM
    BindingDB: IC50=8000nM
    18159 5f3c:A (2.06) BS03 5U8 1.14.11.66
    1.14.11.69    		 N/A O75164 26741168 MOAD: ic50=0.9uM
    PDBbind: -logKd/Ki=6.05, IC50=0.9uM
    BindingDB: IC50=900nM
    18160 5f3e:A (2.16) BS03 5UO 1.14.11.66
    1.14.11.69    		 N/A O75164 26741168 MOAD: ic50=0.138uM
    PDBbind: -logKd/Ki=6.86, IC50=0.138uM
    BindingDB: IC50=138nM
    18161 5f3g:A (2.5) BS03 5UL 1.14.11.66
    1.14.11.69    		 N/A O75164 26741168 MOAD: ic50=0.126uM
    PDBbind: -logKd/Ki=6.90, IC50=0.126uM
    BindingDB: IC50=126nM
    18162 5f3i:A (2.24) BS03 5UJ 1.14.11.66
    1.14.11.69    		 N/A O75164 26741168 MOAD: ic50=0.08uM
    PDBbind: -logKd/Ki=7.10, IC50=0.08uM
    BindingDB: IC50=80nM
    18163 5f3t:A (2.05) BS03 5UH 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13    		 GO:0003968 ... Q6YMS4 26872970 MOAD: Kd=210uM
    PDBbind: -logKd/Ki=3.68, Kd=210uM
    18164 5f3z:A (2.0) BS03 5V5 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13    		 GO:0003968 ... Q6YMS4 26872970 MOAD: Kd=29uM
    PDBbind: -logKd/Ki=4.54, Kd=29uM
    18165 5f41:A (2.0) BS03 5V6 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13    		 GO:0003968 ... Q6YMS4 26872970 MOAD: Kd=67uM
    PDBbind: -logKd/Ki=4.17, Kd=67uM
    18166 5f4l:A (2.7) BS01 5VE ? GO:0019031 ... C6G099 26985324 PDBbind: -logKd/Ki=7.62, Kd=0.024uM
    18167 5f4n:A (1.91) BS01 5UY 2.7.11.1 GO:0000077 ... O14757 27167172 MOAD: ic50=2.2nM
    PDBbind: -logKd/Ki=8.66, IC50=2.2nM
    BindingDB: IC50=2.00nM
    18168 5f4n:A (1.91) BS02 5UY 2.7.11.1 GO:0000077 ... O14757 27167172 MOAD: ic50=2.2nM
    PDBbind: -logKd/Ki=8.66, IC50=2.2nM
    BindingDB: IC50=2.00nM
    18169 5f4p:D (2.6) BS01 5VG ? GO:0019031 ... C6G099 26985324 PDBbind: -logKd/Ki=7.33, Kd=0.047uM
    18170 5f4r:A (2.8) BS01 5VF ? GO:0019031 ... C6G099 26985324 PDBbind: -logKd/Ki=7.02, Kd=0.095uM
    18171 5f4u:A (3.1) BS01 5VH ? GO:0019031 ... C6G099 26985324 PDBbind: -logKd/Ki=7.02, Kd=0.095uM
    18172 5f5h:A (2.23) BS01 rna 2.3.2.27 N/A Q4VGL6 27010430 PDBbind: Kd=81nM
    18173 5f5h:B (2.23) BS01 rna 2.3.2.27 N/A Q4VGL6 27010430 PDBbind: Kd=81nM
    18174 5f5i:A (2.63) BS02 5V1 1.14.11.66
    1.14.11.69    		 N/A O75164 26741168 PDBbind: -logKd/Ki=6.02, IC50=0.95uM
    18175 5f5z:A (1.76) BS01 5VY ? N/A O60885 28336808 MOAD: Kd=86nM
    PDBbind: -logKd/Ki=7.07, Kd=86nM
    18176 5f60:A (1.35) BS01 5VZ ? N/A O60885 28336808 MOAD: Kd=43nM
    PDBbind: -logKd/Ki=7.37, Kd=43nM
    18177 5f61:A (1.45) BS01 5W0 ? N/A O60885 28336808 MOAD: Kd=35nM
    PDBbind: -logKd/Ki=7.46, Kd=35nM
    18178 5f62:A (1.35) BS01 5W1 ? N/A O60885 28336808 MOAD: Kd=6.8nM
    PDBbind: -logKd/Ki=8.17, Kd=6.8nM
    18179 5f63:A (1.45) BS01 5W2 ? N/A O60885 28336808 MOAD: Kd=12nM
    PDBbind: -logKd/Ki=7.92, Kd=12nM
    18180 5f6d:A (1.553) BS01 5VJ 2.3.2.- GO:0000122 ... P63279 27038327 PDBbind: -logKd/Ki=2.52, IC50>3mM
    18181 5f6u:A (1.552) BS01 5VK 2.3.2.- GO:0000122 ... P63279 27038327 MOAD: ic50=3mM
    PDBbind: -logKd/Ki=2.52, IC50=3mM
    18182 5f6v:A (1.492) BS01 5VL 2.3.2.- GO:0000122 ... P63279 27038327 MOAD: ic50=5.8mM
    PDBbind: -logKd/Ki=2.24, IC50=5.8mM
    18183 5f74:A (2.35) BS02 AMP ? GO:0004860 ... Q9CQV8 26984404 MOAD: Kd=7.6uM
    PDBbind: -logKd/Ki=5.12, Kd=7.6uM
    18184 5f8y:A (1.7) BS01 X6X ? GO:0030246 ... H2FH31 27010847 MOAD: Kd=57uM
    PDBbind: -logKd/Ki=4.24, Kd=57uM
    18185 5f8y:A (1.7) BS02 X6X ? GO:0030246 ... H2FH31 27010847 MOAD: Kd=57uM
    PDBbind: -logKd/Ki=4.24, Kd=57uM
    18186 5f8y:A (1.7) BS03 X6X ? GO:0030246 ... H2FH31 27010847 MOAD: Kd=57uM
    PDBbind: -logKd/Ki=4.24, Kd=57uM
    18187 5f90:A (1.64) BS01 GLA ? GO:0030246 ... H2FH31 27010847 PDBbind: -logKd/Ki=4.85, Kd=14uM
    18188 5f90:A (1.64) BS02 GLA ? GO:0030246 ... H2FH31 27010847 PDBbind: -logKd/Ki=4.85, Kd=14uM
    18189 5f91:A (1.998) BS01 5WJ 4.2.1.2 GO:0003824 ... P9WN93 27325754 MOAD: Ki=3.2uM
    PDBbind: -logKd/Ki=5.20, Ki=6.3uM
    18190 5f91:A (1.998) BS02 5WJ 4.2.1.2 GO:0003824 ... P9WN93 27325754 MOAD: Ki=3.2uM
    PDBbind: -logKd/Ki=5.20, Ki=6.3uM
    18191 5f91:C (1.998) BS01 5WJ 4.2.1.2 GO:0003824 ... P9WN93 27325754 MOAD: Ki=3.2uM
    PDBbind: -logKd/Ki=5.20, Ki=6.3uM
    18192 5f91:C (1.998) BS02 5WJ 4.2.1.2 GO:0003824 ... P9WN93 27325754 MOAD: Ki=3.2uM
    PDBbind: -logKd/Ki=5.20, Ki=6.3uM
    18193 5f94:A (2.51) BS01 3UO 2.7.11.1
    2.7.11.26    		 GO:0004672 ... P49841 26751161 PDBbind: -logKd/Ki=8.47, IC50=3.4nM
    BindingDB: IC50=3.4nM
    18194 5f95:A (2.525) BS01 3UP 2.7.11.1
    2.7.11.26    		 GO:0004672 ... P49841 26751161 PDBbind: -logKd/Ki=8.01, IC50=9.8nM
    18195 5f98:A (3.28) BS01 rna 3.6.4.13 GO:0003676 ... O95786 26733676 PDBbind: Kd=1.7nM
    18196 5f98:C (3.28) BS01 rna 3.6.4.13 GO:0003676 ... O95786 26733676 PDBbind: Kd=1.7nM
    18197 5f98:E (3.28) BS01 rna 3.6.4.13 GO:0003676 ... O95786 26733676 PDBbind: Kd=1.7nM
    18198 5f98:G (3.28) BS01 rna 3.6.4.13 GO:0003676 ... O95786 26733676 PDBbind: Kd=1.7nM
    18199 5f98:I (3.28) BS01 rna 3.6.4.13 GO:0003676 ... O95786 26733676 PDBbind: Kd=1.7nM
    18200 5f98:K (3.28) BS01 rna 3.6.4.13 GO:0003676 ... O95786 26733676 PDBbind: Kd=1.7nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218