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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    16801 4yxo:A (1.06) BS02 4JC 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 26700575 MOAD: Kd=91.4nM
    PDBbind: -logKd/Ki=7.04, Kd=91.4nM
    BindingDB: Ki=0.05nM, Kd=125400nM
    16802 4yxo:A (1.06) BS03 4JC 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 26700575 MOAD: Kd=91.4nM
    PDBbind: -logKd/Ki=7.04, Kd=91.4nM
    BindingDB: Ki=0.05nM, Kd=125400nM
    16803 4yxu:A (1.08) BS02 4JE 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 26700575 MOAD: Kd=57.4nM
    PDBbind: -logKd/Ki=7.24, Kd=57.4nM
    BindingDB: Ki=0.03nM, Kd=57800nM
    16804 4yxu:A (1.08) BS03 4JE 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 26700575 MOAD: Kd=57.4nM
    PDBbind: -logKd/Ki=7.24, Kd=57.4nM
    BindingDB: Ki=0.03nM, Kd=57800nM
    16805 4yyl:A (1.905) BS01 4KN 3.1.-.- GO:0003723 ... P03433 26252962 MOAD: ic50=9.7uM
    PDBbind: -logKd/Ki=5.01, IC50=9.7uM
    BindingDB: IC50=9700nM
    16806 4yyl:A (1.905) BS02 4KN 3.1.-.- GO:0003723 ... P03433 26252962 MOAD: ic50=9.7uM
    PDBbind: -logKd/Ki=5.01, IC50=9.7uM
    BindingDB: IC50=9700nM
    16807 4yyl:A (1.905) BS03 4KN 3.1.-.- GO:0003723 ... P03433 26252962 MOAD: ic50=9.7uM
    PDBbind: -logKd/Ki=5.01, IC50=9.7uM
    BindingDB: IC50=9700nM
    16808 4yyt:A (1.07) BS01 S2O 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 26700575 MOAD: Kd=418.3nM
    PDBbind: -logKd/Ki=6.38, Kd=418.3nM
    BindingDB: Ki=125nM, IC50=3000nM, Kd=392000nM
    16809 4yyt:A (1.07) BS02 S2O 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 26700575 MOAD: Kd=418.3nM
    PDBbind: -logKd/Ki=6.38, Kd=418.3nM
    BindingDB: Ki=125nM, IC50=3000nM, Kd=392000nM
    16810 4yyt:A (1.07) BS03 S2O 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 26700575 MOAD: Kd=418.3nM
    PDBbind: -logKd/Ki=6.38, Kd=418.3nM
    BindingDB: Ki=125nM, IC50=3000nM, Kd=392000nM
    16811 4yyt:A (1.07) BS04 S2O 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 26700575 MOAD: Kd=418.3nM
    PDBbind: -logKd/Ki=6.38, Kd=418.3nM
    BindingDB: Ki=125nM, IC50=3000nM, Kd=392000nM
    16812 4yz9:A (2.463) BS01 4K7 2.7.11.1
    3.1.26.-    		 GO:0004521 ... O75460 26438213 MOAD: Ki=200nM
    PDBbind: -logKd/Ki=7.70, IC50=20nM
    16813 4yzc:A (2.494) BS01 STU 2.7.11.1
    3.1.26.-    		 GO:0004521 ... O75460 26438213 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    16814 4yzm:A (3.0) BS01 4K4 2.7.11.1 GO:0004672 ... Q6XHB2 25897865 PDBbind: -logKd/Ki=5.27, IC50=5.38uM
    16815 4yzn:A (1.55) BS01 4K5 2.7.11.1 GO:0004672 ... Q6XHB2 25897865 MOAD: ic50=15.4uM
    PDBbind: -logKd/Ki=4.81, IC50=15.4uM
    16816 4yzu:A (1.41) BS01 4K6 3.4.21.22 GO:0004252 ... P00740 25937013 MOAD: Ki=9uM
    PDBbind: -logKd/Ki=5.05, Ki=9uM
    BindingDB: Ki=9000nM
    16817 4z07:A (2.5) BS01 PCG 2.7.11.12 GO:0001932 ... Q13976 27066748 PDBbind: -logKd/Ki=7.99, Kd=10.3nM
    16818 4z07:A (2.5) BS02 PCG 2.7.11.12 GO:0001932 ... Q13976 27066748 PDBbind: -logKd/Ki=7.99, Kd=10.3nM
    16819 4z07:C (2.5) BS01 PCG 2.7.11.12 GO:0001932 ... Q13976 27066748 PDBbind: -logKd/Ki=7.99, Kd=10.3nM
    16820 4z07:C (2.5) BS02 PCG 2.7.11.12 GO:0001932 ... Q13976 27066748 PDBbind: -logKd/Ki=7.99, Kd=10.3nM
    16821 4z0k:A (1.41) BS01 4LN 3.4.21.22 GO:0004252 ... P00740 25937013 MOAD: Ki=0.462uM
    PDBbind: -logKd/Ki=6.34, Ki=0.462uM
    BindingDB: IC50=507nM
    16822 4z0q:A (1.45) BS02 4K9 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 26276436 MOAD: Ki=6.8nM
    PDBbind: -logKd/Ki=8.17, Ki=6.8nM
    BindingDB: Ki=6.8nM
    16823 4z16:A (2.9) BS01 4LH 2.7.10.2 GO:0004672 ... P52333 26258521 PDBbind: -logKd/Ki=8.32, IC50=4.8nM
    BindingDB: IC50=4.8nM
    16824 4z1e:A (2.01) BS02 DF5 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 26276436 MOAD: Ki=5.7nM
    PDBbind: -logKd/Ki=8.24, Ki=5.7nM
    16825 4z1j:A (1.27) BS02 4KC 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 26276436 MOAD: Ki=7.7nM
    PDBbind: -logKd/Ki=8.11, Ki=7.7nM
    BindingDB: Ki=7.7nM
    16826 4z1k:A (1.35) BS02 4KB 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 26276436 MOAD: Ki=4.7nM
    PDBbind: -logKd/Ki=8.33, Ki=4.7nM
    BindingDB: Ki=4.7nM
    16827 4z1n:A (1.47) BS02 4KD 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 26276436 MOAD: Ki=5.89nM
    PDBbind: -logKd/Ki=8.23, Ki=5.89nM
    BindingDB: Ki=5.9nM
    16828 4z1q:A (1.399) BS01 558 ? N/A O60885 26985289 MOAD: ic50=0.015uM
    PDBbind: -logKd/Ki=7.82, IC50=0.015uM
    16829 4z1s:A (1.06) BS01 559 ? N/A O60885 26985289 MOAD: ic50=0.79uM
    PDBbind: -logKd/Ki=6.10, IC50=0.79uM
    16830 4z22:A (2.62) BS01 4KG 3.4.23.39 GO:0004190 ... P46925 26670264 PDBbind: -logKd/Ki=6.24, IC50=0.57uM
    BindingDB: IC50=340nM
    16831 4z2b:A (1.8) BS01 4LC 3.1.13.4
    3.1.4.-    		 GO:0003824 ... Q6L8Q7 26055709 MOAD: Ki=17.5nM
    PDBbind: -logKd/Ki=7.76, Ki=17.5nM
    16832 4z2g:A (2.6) BS01 M6V 3.2.1.14 GO:0004553 ... P11797 26030312 PDBbind: -logKd/Ki=6.66, IC50=0.217uM
    16833 4z2g:A (2.6) BS02 M6V 3.2.1.14 GO:0004553 ... P11797 26030312 PDBbind: -logKd/Ki=6.66, IC50=0.217uM
    16834 4z2h:A (2.35) BS01 M6A 3.2.1.14 GO:0004553 ... P11797 26030312 MOAD: ic50=8.3uM
    PDBbind: -logKd/Ki=5.08, IC50=8.3uM
    16835 4z2i:A (2.0) BS01 M6B 3.2.1.14 GO:0004553 ... P11797 26030312 MOAD: ic50=0.036uM
    PDBbind: -logKd/Ki=7.44, IC50=0.036uM
    16836 4z2i:A (2.0) BS02 M6B 3.2.1.14 GO:0004553 ... P11797 26030312 MOAD: ic50=0.036uM
    PDBbind: -logKd/Ki=7.44, IC50=0.036uM
    16837 4z2j:A (2.6) BS01 M6G 3.2.1.14 GO:0004553 ... P11797 26030312 PDBbind: -logKd/Ki=6.43, IC50=0.374uM
    16838 4z2j:A (2.6) BS02 M6G 3.2.1.14 GO:0004553 ... P11797 26030312 PDBbind: -logKd/Ki=6.43, IC50=0.374uM
    16839 4z2k:A (2.3) BS01 M6E 3.2.1.14 GO:0004553 ... P11797 26030312 PDBbind: -logKd/Ki=5.78, IC50=1.66uM
    16840 4z2l:A (2.3) BS01 M6F 3.2.1.14 GO:0004553 ... P11797 26030312 PDBbind: -logKd/Ki=5.85, IC50=1.41uM
    16841 4z31:A (2.5) BS01 rna 2.3.2.27 N/A Q9HBD1 26489670 PDBbind: Kd=356nM
    16842 4z31:A (2.5) BS02 rna 2.3.2.27 N/A Q9HBD1 26489670 PDBbind: Kd=356nM
    16843 4z31:A (2.5) BS03 rna 2.3.2.27 N/A Q9HBD1 26489670 PDBbind: Kd=356nM
    16844 4z31:B (2.5) BS01 rna 2.3.2.27 N/A Q9HBD1 26489670 PDBbind: Kd=356nM
    16845 4z31:B (2.5) BS02 rna 2.3.2.27 N/A Q9HBD1 26489670 PDBbind: Kd=356nM
    16846 4z31:B (2.5) BS03 rna 2.3.2.27 N/A Q9HBD1 26489670 PDBbind: Kd=356nM
    16847 4z3c:C (1.57) BS01 dna 1.14.11.80 GO:0003677 ... O43151 29276034 PDBbind: Kd=2.4uM
    16848 4z3c:C (1.57) BS02 dna 1.14.11.80 GO:0003677 ... O43151 29276034 PDBbind: Kd=2.4uM
    16849 4z3v:A (1.6) BS01 4L6 2.7.10.2 GO:0004672 ... Q06187 26087137 MOAD: ic50=4nM
    PDBbind: -logKd/Ki=8.40, IC50=4nM
    BindingDB: EC50=28nM, IC50=5.6nM
    16850 4z4c:A (2.303) BS01 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 26359634 PDBbind: Kd=1.8nM
    16851 4z4c:A (2.303) BS02 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 26359634 PDBbind: Kd=1.8nM
    16852 4z4d:A (1.6) BS01 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 26359634 PDBbind: Kd=1.9nM
    16853 4z4d:A (1.6) BS02 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 26359634 PDBbind: Kd=1.9nM
    16854 4z4e:A (1.8) BS01 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 26359634 PDBbind: Kd=1.9nM
    16855 4z4e:A (1.8) BS02 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 26359634 PDBbind: Kd=1.9nM
    16856 4z4f:A (2.8) BS01 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 26359634 PDBbind: Kd=0.45nM
    16857 4z4f:A (2.8) BS02 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 26359634 PDBbind: Kd=0.45nM
    16858 4z4g:A (2.7) BS01 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 26359634 PDBbind: Kd=1.7nM
    16859 4z4g:A (2.7) BS02 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 26359634 PDBbind: Kd=1.7nM
    16860 4z4h:A (2.504) BS01 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 26359634 PDBbind: Kd=1.5nM
    16861 4z4h:A (2.504) BS02 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 26359634 PDBbind: Kd=1.5nM
    16862 4z4i:A (2.801) BS01 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 26359634 PDBbind: Kd=1.8nM
    16863 4z4i:A (2.801) BS02 rna 3.1.26.n2 GO:0000340 ... Q9UKV8 26359634 PDBbind: Kd=1.8nM
    16864 4z6h:A (1.8) BS01 4L2 ? N/A Q9H8M2 25864491 MOAD: Kd=612nM
    PDBbind: -logKd/Ki=6.21, Kd=612nM
    16865 4z6i:A (1.95) BS01 4L3 ? N/A Q9H8M2 25864491 PDBbind: -logKd/Ki=6.31, Kd=493nM
    BindingDB: Kd=493nM
    16866 4z7h:A (2.9) BS01 4L5 2.7.11.1
    3.1.26.-    		 GO:0004521 ... O75460 25968568 PDBbind: -logKd/Ki=6.66, IC50=218nM
    BindingDB: EC50=143nM, IC50=1180nM
    16867 4z7k:A (3.0) BS01 rna ? GO:0042802 ... A4FXZ3 26996962 PDBbind: Kd=0.3nM
    16868 4z7k:B (3.0) BS01 rna ? GO:0042802 ... A4FXZ3 26996962 PDBbind: Kd=0.3nM
    16869 4z7l:A (3.503) BS01 rna ? GO:0042802 ... A4FXZ3 26996962 PDBbind: Kd=0.013uM
    16870 4z7l:D (3.503) BS01 rna ? GO:0042802 ... A4FXZ3 26996962 PDBbind: Kd=0.013uM
    16871 4z7l:G (3.503) BS01 rna ? GO:0042802 ... A4FXZ3 26996962 PDBbind: Kd=0.013uM
    16872 4z83:E (1.8) BS02 4L7 2.7.11.11 GO:0001669 ... P00517 26578105 PDBbind: -logKd/Ki=7.40, Ki=40nM
    16873 4z83:E (1.8) BS03 4L7 2.7.11.11 GO:0001669 ... P00517 26578105 PDBbind: -logKd/Ki=7.40, Ki=40nM
    16874 4z84:A (1.554) BS02 NVX 2.7.11.11 GO:0001669 ... P00517 26578105 PDBbind: -logKd/Ki=5.82, Ki=1500nM
    16875 4z8d:A (2.0) BS01 4LB 2.3.1.180 GO:0004315 ... P0A6R0 27626097 MOAD: ic50=6uM
    PDBbind: -logKd/Ki=5.22, IC50=6uM
    16876 4z93:A (1.27) BS01 4LD ? N/A O60885 26080064 MOAD: Kd=44.6nM
    PDBbind: -logKd/Ki=7.35, Kd=44.6nM
    BindingDB: Kd=47nM, Ki=12nM, IC50=37nM
    16877 4z9l:A (2.1) BS02 880 2.7.11.24 GO:0004672 ... P53779 12954329 MOAD: ic50=1.6nM
    PDBbind: -logKd/Ki=8.80, IC50=1.6nM
    BindingDB: IC50=1.6nM
    16878 4za0:A (2.31) BS02 PAH 4.2.1.11 GO:0000015 ... P09104 27723749 PDBbind: -logKd/Ki=7.21, IC50=62.3nM
    BindingDB: IC50=62.3nM
    16879 4zae:A (1.86) BS01 4M1 3.4.21.22 GO:0004252 ... P00740 25978966 MOAD: Ki=3.6nM
    PDBbind: -logKd/Ki=8.44, Ki=3.6nM
    BindingDB: Ki=3.6nM, IC50=3.64nM
    16880 4zam:A (1.42) BS01 MA4 3.5.2.6 GO:0008800 ... P0AD64 26340563 PDBbind: -logKd/Ki=7.96, Kd=0.011uM
    16881 4zb6:A (1.801) BS01 GDS ? N/A A0A0R4I980 26348000 MOAD: Kd=0.53uM
    PDBbind: -logKd/Ki=6.28, Kd=0.53uM
    16882 4zb6:A (1.801) BS02 GDS ? N/A A0A0R4I980 26348000 MOAD: Kd=0.53uM
    PDBbind: -logKd/Ki=6.28, Kd=0.53uM
    16883 4zb6:B (1.801) BS01 GDS ? N/A A0A0R4I980 26348000 MOAD: Kd=0.53uM
    PDBbind: -logKd/Ki=6.28, Kd=0.53uM
    16884 4zb6:B (1.801) BS02 GDS ? N/A A0A0R4I980 26348000 MOAD: Kd=0.53uM
    PDBbind: -logKd/Ki=6.28, Kd=0.53uM
    16885 4zb8:A (2.0) BS01 GDS ? N/A A0A0R4I981 26348000 MOAD: Kd=0.94uM
    PDBbind: -logKd/Ki=6.03, Kd=0.94uM
    16886 4zba:A (1.501) BS01 GDS ? N/A A0A0R4I985 26348000 MOAD: Kd=3.09uM
    PDBbind: -logKd/Ki=5.51, Kd=3.09uM
    16887 4zba:A (1.501) BS02 GDS ? N/A A0A0R4I985 26348000 MOAD: Kd=3.09uM
    PDBbind: -logKd/Ki=5.51, Kd=3.09uM
    16888 4zba:B (1.501) BS01 GDS ? N/A A0A0R4I985 26348000 MOAD: Kd=3.09uM
    PDBbind: -logKd/Ki=5.51, Kd=3.09uM
    16889 4zba:B (1.501) BS02 GDS ? N/A A0A0R4I985 26348000 MOAD: Kd=3.09uM
    PDBbind: -logKd/Ki=5.51, Kd=3.09uM
    16890 4zbf:A (2.2) BS01 4M7 ? GO:0042981 ... Q07820 25844895 MOAD: Ki=0.074uM
    PDBbind: -logKd/Ki=7.13, Ki=0.074uM
    16891 4zbi:A (2.5) BS01 4M6 ? GO:0042981 ... Q07820 25844895 MOAD: Ki=0.31uM
    PDBbind: -logKd/Ki=6.51, Ki=0.31uM
    BindingDB: Ki=310nM
    16892 4zbn:A (2.447) BS01 dna ? GO:0005102 ... P01138 26027732 PDBbind: Kd=0.21nM
    16893 4zbn:A (2.447) BS02 dna ? GO:0005102 ... P01138 26027732 PDBbind: Kd=0.21nM
    16894 4zbn:B (2.447) BS01 dna ? GO:0005102 ... P01138 26027732 PDBbind: Kd=0.21nM
    16895 4zbn:B (2.447) BS02 dna ? GO:0005102 ... P01138 26027732 PDBbind: Kd=0.21nM
    16896 4zcs:A (2.45) BS01 CDC 2.7.7.15 GO:0003824 ... Q8IEE9 30046154 PDBbind: -logKd/Ki=4.33, Kd=47uM
    16897 4zcw:A (1.992) BS01 4NG 4.2.1.11 GO:0000015 ... P09104 27723749 MOAD: ic50=42.5nM
    PDBbind: -logKd/Ki=7.37, IC50=42.5nM
    BindingDB: IC50=42.5nM
    16898 4ze6:A (1.17) BS01 011 3.4.23.22 GO:0004190 ... P11838 27139825 MOAD: Kd=3.3mM
    PDBbind: -logKd/Ki=2.48, Kd=3.3mM
    16899 4zec:A (2.15) BS01 C84 ? GO:0015833 ... Q52012 26244338 PDBbind: -logKd/Ki=5.82, Kd=1.5uM
    16900 4zed:A (1.75) BS01 AGW ? GO:0015833 ... Q52012 26244338 PDBbind: -logKd/Ki=5.12, Kd=7.5uM
    16901 4zei:A (2.3) BS01 LAO ? GO:0015833 ... Q52012 26244338 MOAD: Kd=1.33uM
    PDBbind: -logKd/Ki=5.88, Kd=1.33uM
    16902 4zek:A (2.09) BS01 LAH ? GO:0015833 ... Q52012 26244338 PDBbind: -logKd/Ki=5.66, Kd=2.2uM
    16903 4zfi:A (2.0) BS01 4NJ 2.3.2.27 GO:0005634 ... Q00987 27709883 MOAD: Kd=0.5uM
    PDBbind: -logKd/Ki=6.30, Kd=0.5uM
    16904 4zg6:A (1.8) BS04 4NY 3.1.4.39 GO:0003676 ... Q13822 26371182 MOAD: ic50=0.011uM
    PDBbind: -logKd/Ki=6.33, IC50=0.472uM
    16905 4zg7:A (1.75) BS04 4O0 3.1.4.39 GO:0003676 ... Q13822 26371182 MOAD: ic50=0.002uM
    PDBbind: -logKd/Ki=8.70, IC50=0.002uM
    16906 4zg9:A (2.95) BS04 4O2 3.1.4.39 GO:0003676 ... Q13822 26371182 PDBbind: -logKd/Ki=7.59, IC50=0.026uM
    BindingDB: IC50=<500nM
    16907 4zg9:A (2.95) BS05 4O2 3.1.4.39 GO:0003676 ... Q13822 26371182 PDBbind: -logKd/Ki=7.59, IC50=0.026uM
    BindingDB: IC50=<500nM
    16908 4zga:A (2.6) BS05 4O3 3.1.4.39 GO:0003676 ... Q13822 26371182 PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    BindingDB: IC50=<500nM
    16909 4zgk:A (2.0) BS01 4NX 2.3.2.27 GO:0005634 ... Q00987 27709883 MOAD: Kd=3.1uM
    PDBbind: -logKd/Ki=5.51, Kd=3.1uM
    16910 4zh2:C (4.204) BS01 4OB 2.7.7.6 GO:0000345 ... P0A8V2 26190576 PDBbind: -logKd/Ki=5.00, IC50=10uM
    16911 4zh2:D (4.204) BS01 4OB 2.7.7.6 GO:0000287 ... P0A8T7 26190576 PDBbind: -logKd/Ki=5.00, IC50=10uM
    16912 4zh3:C (4.082) BS01 4OD 2.7.7.6 GO:0000345 ... P0A8V2 26190576 PDBbind: -logKd/Ki=4.40, IC50=40uM
    16913 4zh3:D (4.082) BS04 4OD 2.7.7.6 GO:0000287 ... P0A8T7 26190576 PDBbind: -logKd/Ki=4.40, IC50=40uM
    16914 4zh4:C (3.993) BS01 4OE 2.7.7.6 GO:0000345 ... P0A8V2 26190576 PDBbind: -logKd/Ki=4.22, IC50=60uM
    16915 4zh4:D (3.993) BS01 4OE 2.7.7.6 GO:0000287 ... P0A8T7 26190576 PDBbind: -logKd/Ki=4.22, IC50=60uM
    16916 4zij:A (1.78) BS01 SFQ ? GO:0003756 ... P0AEG4 27778134 MOAD: Kd=565uM
    PDBbind: -logKd/Ki=3.25, Kd=565uM
    16917 4zim:A (2.65) BS01 4OK 2.7.10.2 GO:0004672 ... O60674 25987372 PDBbind: -logKd/Ki=8.62, IC50=2.4nM
    BindingDB: IC50=2.4nM
    16918 4zip:A (1.11) BS01 G64 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 26096678 PDBbind: -logKd/Ki=9.68, Ki=0.21nM
    16919 4zip:B (1.11) BS01 G64 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 26096678 MOAD: Ki=0.21nM
    PDBbind: -logKd/Ki=9.68, Ki=0.21nM
    16920 4zj8:A (2.751) BS01 SUV ? GO:0004930 ... O43613
    Q9V2J8    		 26950369 PDBbind: -logKd/Ki=9.26, Ki=0.55nM
    16921 4zjc:A (2.832) BS01 4OT ? GO:0004930 ... O43613
    Q9V2J8    		 26950369 PDBbind: -logKd/Ki=8.96, Ki=1.1nM
    16922 4zji:A (1.99) BS01 4OQ 2.7.11.1 GO:0004672 ... Q13153 26191365 MOAD: Kd=340nM
    PDBbind: -logKd/Ki=6.47, Kd=340nM
    BindingDB: Kd=340nM, IC50=323nM
    16923 4zjj:A (2.2) BS01 4OR 2.7.11.1 GO:0004672 ... Q13153 26191365 MOAD: Kd=9.9nM
    PDBbind: -logKd/Ki=8.00, Kd=9.9nM
    BindingDB: IC50=18nM, Kd=9.9nM
    16924 4zjr:A (2.702) BS01 4P3 ? GO:0003677 ... P51449 26048806 PDBbind: -logKd/Ki=7.54, IC50=0.029uM
    BindingDB: EC50=93nM, IC50=11nM
    16925 4zjw:A (2.5) BS01 4P1 ? GO:0003677 ... P51449 26048806 MOAD: ic50=0.1uM
    PDBbind: -logKd/Ki=6.66, IC50=0.22uM
    BindingDB: IC50=100nM, EC50=200nM
    16926 4zk5:A (2.89) BS02 4P4 2.7.11.1 GO:0004672 ... O95819 26288693 PDBbind: -logKd/Ki=8.43, IC50=3.7nM
    BindingDB: IC50=3.7nM
    16927 4zki:B (3.401) BS01 ADP 2.7.13.3 GO:0000155 ... A0A0M3KKX3 28994408 PDBbind: -logKd/Ki=2.92, Kd=1195uM
    16928 4zl4:A (2.37) BS01 4PK 3.4.23.- GO:0004190 ... A5K302 26214367 MOAD: Kd=13.8nM
    PDBbind: -logKd/Ki=7.86, Kd=13.8nM
    16929 4zla:A (1.9) BS05 BES 3.4.11.1
    3.4.11.10    		 GO:0004177 ... O25294 26616008 MOAD: ic50=49.9nM
    PDBbind: -logKd/Ki=7.30, IC50=49.9nM
    16930 4zla:B (1.9) BS05 BES 3.4.11.1
    3.4.11.10    		 GO:0004177 ... O25294 26616008 MOAD: ic50=49.9nM
    PDBbind: -logKd/Ki=7.30, IC50=49.9nM
    16931 4zla:E (1.9) BS05 BES 3.4.11.1
    3.4.11.10    		 GO:0004177 ... O25294 26616008 MOAD: ic50=49.9nM
    PDBbind: -logKd/Ki=7.30, IC50=49.9nM
    16932 4zlo:A (2.5) BS01 4PV 2.7.11.1 GO:0004672 ... Q13153 26191365 MOAD: ic50=12uM
    PDBbind: -logKd/Ki=4.92, IC50=12uM
    BindingDB: IC50=12000nM
    16933 4zls:A (1.53) BS01 G61 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 26107245 PDBbind: -logKd/Ki=9.09, Ki=0.82nM
    16934 4zls:B (1.53) BS01 G61 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 26107245 MOAD: Ki=0.82nM
    PDBbind: -logKd/Ki=9.09, Ki=0.82nM
    16935 4zly:A (1.65) BS01 4RU 2.7.10.2 GO:0004672 ... Q06187 26087137 MOAD: ic50=3.5uM
    PDBbind: -logKd/Ki=5.46, IC50=3.5uM
    BindingDB: IC50=3500nM
    16936 4zlz:A (2.0) BS01 4RV 2.7.10.2 GO:0004672 ... Q06187 26087137 MOAD: ic50=100nM
    PDBbind: -logKd/Ki=7.00, IC50=100nM
    BindingDB: IC50=100000nM, EC50=28600nM
    16937 4zme:A (1.98) BS02 ADN 2.7.11.7 GO:0004674 ... P42527 26260792 MOAD: Kd=50uM
    PDBbind: -logKd/Ki=4.30, Kd=50uM
    16938 4zmf:A (2.39) BS01 AMP 2.7.11.7 GO:0004674 ... P42527 26260792 MOAD: Kd=110uM
    PDBbind: -logKd/Ki=3.96, Kd=110uM
    16939 4zo5:B (2.5) BS02 4Q0 3.1.4.17 GO:0004114 ... Q9Y233 26077491 MOAD: Ki=0.15nM
    PDBbind: -logKd/Ki=9.82, Ki=0.15nM
    BindingDB: Ki=0.15nM
    16940 4zom:A (2.27) BS01 4Q3 ? GO:0003677 ... P51449 26048789 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: EC50=10.0nM, IC50=4.9nM
    16941 4zow:A (2.45) BS01 CLM ? GO:0005886 ... P0AEY8 26238402 MOAD: Kd=75uM
    PDBbind: -logKd/Ki=4.12, Kd=75uM
    16942 4zpe:A (1.7) BS01 4QA 3.4.23.46 GO:0004190 ... P56817 26195137 MOAD: ic50=0.45uM
    PDBbind: -logKd/Ki=6.35, IC50=0.45uM
    16943 4zpf:A (1.8) BS01 4QD 3.4.23.46 GO:0004190 ... P56817 26195137 MOAD: ic50=0.18uM
    PDBbind: -logKd/Ki=6.74, IC50=0.18uM
    16944 4zpg:A (2.0) BS01 4QF 3.4.23.46 GO:0004190 ... P56817 26195137 MOAD: ic50=0.055uM
    PDBbind: -logKd/Ki=7.26, IC50=0.055uM
    16945 4zph:A (2.8) BS01 PRL ? GO:0003700 ... P53762 26245371 PDBbind: -logKd/Ki=7.51, Kd=31nM
    16946 4zpk:A (3.6) BS01 dna ? GO:0003700 ... P53762 26245371 PDBbind: Kd=45nM
    16947 4zpk:A (3.6) BS02 dna ? GO:0003700 ... P53762 26245371 PDBbind: Kd=45nM
    16948 4zpk:B (3.6) BS01 dna ? GO:0003700 ... P97481 26245371 PDBbind: Kd=45nM
    16949 4zpk:B (3.6) BS02 dna ? GO:0003700 ... P97481 26245371 PDBbind: Kd=45nM
    16950 4zq9:A (2.6) BS01 dna 3.6.4.12 N/A P03132 26370092 PDBbind: Kd=128nM
    16951 4zq9:A (2.6) BS02 dna 3.6.4.12 N/A P03132 26370092 PDBbind: Kd=128nM
    16952 4zq9:B (2.6) BS01 dna 3.6.4.12 N/A P03132 26370092 PDBbind: Kd=128nM
    16953 4zq9:B (2.6) BS02 dna 3.6.4.12 N/A P03132 26370092 PDBbind: Kd=128nM
    16954 4zq9:C (2.6) BS01 dna 3.6.4.12 N/A P03132 26370092 PDBbind: Kd=128nM
    16955 4zq9:C (2.6) BS02 dna 3.6.4.12 N/A P03132 26370092 PDBbind: Kd=128nM
    16956 4zqt:A (1.981) BS01 4QP 3.4.11.- GO:0006508 ... O96935 26406322 PDBbind: -logKd/Ki=5.64, Ki=2.3uM
    16957 4zs0:A (3.0) BS01 4QV 2.7.11.1 GO:0000212 ... O14965 27391133 PDBbind: -logKd/Ki=5.64, IC50=2.3uM
    BindingDB: IC50=2300nM
    16958 4zs2:A (2.16) BS02 FLU 1.14.11.-
    1.14.11.53    		 GO:0001659 ... Q9C0B1 26457839 MOAD: ic50=3.23uM
    PDBbind: -logKd/Ki=5.49, IC50=3.23uM
    16959 4zs3:A (2.45) BS02 A4F 1.14.11.-
    1.14.11.53    		 GO:0001659 ... Q9C0B1 26457839 MOAD: ic50=6.55uM
    PDBbind: -logKd/Ki=5.18, IC50=6.55uM
    16960 4zsa:A (2.0) BS01 4UT 2.7.10.1 GO:0004672 ... P11362 26080733 MOAD: ic50=15nM
    PDBbind: -logKd/Ki=7.82, IC50=15nM
    16961 4zsf:A (1.8) BS01 dna ? GO:0004519 ... Q6UQ65 26240380 PDBbind: Kd=2.9nM
    16962 4zsg:A (1.79) BS01 4QX 2.7.11.24 GO:0004672 ... Q13164 27139631 PDBbind: -logKd/Ki=5.00, IC50>10uM
    16963 4zsh:A (1.8) BS02 4XW ? GO:0003677 ... P19793 26030625 MOAD: Kd=90nM
    PDBbind: -logKd/Ki=7.05, Kd=90nM
    16964 4zsj:A (2.48) BS01 4R0 2.7.11.24 GO:0004672 ... Q13164 27139631 MOAD: ic50=2.3uM
    PDBbind: -logKd/Ki=5.64, IC50=2.3uM
    16965 4zsl:A (2.25) BS01 4QZ 2.7.11.24 GO:0004672 ... Q13164 27139631 PDBbind: -logKd/Ki=5.00, IC50>10uM
    16966 4zsm:A (1.96) BS01 4RW 3.4.23.46 GO:0004190 ... P56817 26001341 PDBbind: -logKd/Ki=2.40, IC50~4mM
    BindingDB: IC50=4000000nM
    16967 4zsp:A (1.91) BS01 4RZ 3.4.23.46 GO:0004190 ... P56817 26001341 MOAD: ic50=1.83uM
    PDBbind: -logKd/Ki=5.74, IC50=1.83uM
    16968 4zsq:A (2.3) BS01 4RX 3.4.23.46 GO:0004190 ... P56817 26001341 MOAD: ic50=2.25uM
    PDBbind: -logKd/Ki=5.65, IC50=2.25uM
    16969 4zsr:A (1.65) BS01 4RY 3.4.23.46 GO:0004190 ... P56817 26001341 MOAD: ic50=36.1uM
    PDBbind: -logKd/Ki=4.44, IC50=36.1uM
    16970 4zt8:A (1.98) BS01 CYT 3.2.2.22 GO:0000166 ... D9J2T9 29124196 PDBbind: -logKd/Ki=4.39, Kd=41uM
    16971 4ztl:A (2.39) BS01 4S1 2.7.11.1 GO:0000287 ... Q9NWZ3 26288698 MOAD: ic50=1.2uM
    PDBbind: -logKd/Ki=5.92, IC50=1.2uM
    BindingDB: IC50=1193000nM
    16972 4ztm:A (2.66) BS01 4S2 2.7.11.1 GO:0000287 ... Q9NWZ3 26288698 PDBbind: -logKd/Ki=7.60, IC50=25nM
    BindingDB: IC50=25nM
    16973 4ztn:A (2.23) BS01 4S3 2.7.11.1 GO:0000287 ... Q9NWZ3 26288698 MOAD: ic50=19nM
    PDBbind: -logKd/Ki=7.72, IC50=19nM
    BindingDB: IC50=19nM
    16974 4ztq:A (2.8) BS01 4RM 2.7.11.1 GO:0000212 ... O14965 27391133 PDBbind: -logKd/Ki=6.32, IC50=0.48uM
    BindingDB: IC50=480nM
    16975 4ztr:A (2.85) BS01 4RJ 2.7.11.1 GO:0000212 ... O14965 27391133 PDBbind: -logKd/Ki=8.30, Kd=5nM
    BindingDB: EC50=6000nM, IC50=2.0nM, Kd=5.0nM
    16976 4zts:A (2.9) BS01 4RK 2.7.11.1 GO:0000212 ... O14965 27391133 PDBbind: -logKd/Ki=7.60, IC50=25nM
    BindingDB: IC50=25nM
    16977 4zud:A (2.8) BS01 OLM ? GO:0004930 ... P0ABE7
    P30556    		 26420482 PDBbind: -logKd/Ki=8.16, Kd=6.9nM
    16978 4zum:A (1.42) BS02 FKS 3.5.1.-
    3.5.1.48
    3.5.1.62    		 GO:0004407 ... Q48935 26200446 PDBbind: -logKd/Ki=6.57, IC50=0.27uM
    16979 4zum:B (1.42) BS02 FKS 3.5.1.-
    3.5.1.48
    3.5.1.62    		 GO:0004407 ... Q48935 26200446 PDBbind: -logKd/Ki=6.57, IC50=0.27uM
    16980 4zun:A (1.4) BS01 SS9 3.5.1.-
    3.5.1.48
    3.5.1.62    		 GO:0004407 ... Q48935 26200446 MOAD: ic50=26uM
    PDBbind: -logKd/Ki=4.59, IC50=26uM
    BindingDB: IC50=26000nM
    16981 4zun:B (1.4) BS03 SS9 3.5.1.-
    3.5.1.48
    3.5.1.62    		 GO:0004407 ... Q48935 26200446 MOAD: ic50=26uM
    PDBbind: -logKd/Ki=4.59, IC50=26uM
    BindingDB: IC50=26000nM
    16982 4zuo:A (1.33) BS02 XS6 3.5.1.-
    3.5.1.48
    3.5.1.62    		 GO:0004407 ... Q48935 26200446 MOAD: ic50=0.39uM
    PDBbind: -logKd/Ki=6.41, IC50=0.39uM
    BindingDB: IC50=390nM
    16983 4zuo:B (1.33) BS02 XS6 3.5.1.-
    3.5.1.48
    3.5.1.62    		 GO:0004407 ... Q48935 26200446 MOAD: ic50=0.39uM
    PDBbind: -logKd/Ki=6.41, IC50=0.39uM
    BindingDB: IC50=390nM
    16984 4zup:A (1.421) BS02 5XA 3.5.1.-
    3.5.1.48
    3.5.1.62    		 GO:0004407 ... Q48935 26200446 MOAD: ic50=0.17uM
    PDBbind: -logKd/Ki=6.77, IC50=0.17uM
    16985 4zup:B (1.421) BS02 5XA 3.5.1.-
    3.5.1.48
    3.5.1.62    		 GO:0004407 ... Q48935 26200446 MOAD: ic50=0.17uM
    PDBbind: -logKd/Ki=6.77, IC50=0.17uM
    16986 4zuq:A (1.22) BS01 6XA 3.5.1.-
    3.5.1.48
    3.5.1.62    		 GO:0004407 ... Q48935 26200446 MOAD: ic50=0.13uM
    PDBbind: -logKd/Ki=6.89, IC50=0.13uM
    16987 4zuq:B (1.22) BS01 6XA 3.5.1.-
    3.5.1.48
    3.5.1.62    		 GO:0004407 ... Q48935 26200446 MOAD: ic50=0.13uM
    PDBbind: -logKd/Ki=6.89, IC50=0.13uM
    16988 4zur:A (1.13) BS02 7XA 3.5.1.-
    3.5.1.48
    3.5.1.62    		 GO:0004407 ... Q48935 26200446 MOAD: ic50=0.068uM
    PDBbind: -logKd/Ki=7.17, IC50=0.068uM
    16989 4zur:B (1.13) BS02 7XA 3.5.1.-
    3.5.1.48
    3.5.1.62    		 GO:0004407 ... Q48935 26200446 MOAD: ic50=0.068uM
    PDBbind: -logKd/Ki=7.17, IC50=0.068uM
    16990 4zv1:A (1.52) BS01 ARG N/A GO:0015276 ... N/A 26853627 MOAD: Kd=5.73uM
    PDBbind: -logKd/Ki=5.24, Kd=5.73uM
    16991 4zv2:A (1.43) BS01 GLN N/A GO:0015276 ... N/A 26853627 MOAD: Kd=1170uM
    PDBbind: -logKd/Ki=2.93, Kd=1170uM
    16992 4zvi:A (2.2) BS01 4S4 5.6.2.2 GO:0003677 ... P0AES7 26126187 MOAD: Kd=0.47uM
    PDBbind: -logKd/Ki=6.33, Kd=0.47uM
    16993 4zw3:A (1.8) BS01 4S9 3.4.11.- GO:0006508 ... O96935 26807544 MOAD: Ki=0.027uM
    PDBbind: -logKd/Ki=7.57, Ki=0.027uM
    16994 4zw5:A (1.8) BS02 4SA 3.4.11.- GO:0006508 ... O96935 26807544 MOAD: Ki=37uM
    PDBbind: -logKd/Ki=4.43, Ki=37uM
    16995 4zw6:A (1.9) BS01 4SY 3.4.11.- GO:0006508 ... O96935 26807544 MOAD: Ki=1.9uM
    PDBbind: -logKd/Ki=5.72, Ki=1.9uM
    16996 4zw7:A (1.95) BS02 4SZ 3.4.11.- GO:0006508 ... O96935 26807544 MOAD: Ki=19uM
    PDBbind: -logKd/Ki=4.72, Ki=19uM
    16997 4zw8:A (2.0) BS02 4T2 3.4.11.- GO:0006508 ... O96935 26807544 MOAD: Ki=1.1uM
    PDBbind: -logKd/Ki=5.96, Ki=1.1uM
    16998 4zwx:A (1.696) BS02 5KZ 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 26203869 MOAD: Ki=2nM
    PDBbind: -logKd/Ki=8.70, Ki=2nM
    16999 4zwy:A (1.5) BS02 4SN 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 26203869 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.70, Ki=2nM
    17000 4zwz:A (1.62) BS02 510 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 26203869 PDBbind: -logKd/Ki=8.70, Ki=2nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218