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BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    16601 4y46:A (2.04) BS01 4F2 2.7.11.24 GO:0004672 ... P53779 25893042 MOAD: ic50=11nM
    PDBbind: -logKd/Ki=7.96, IC50=11nM
    BindingDB: IC50=11nM
    16602 4y4g:A (1.439) BS01 GGB 3.4.23.22 GO:0004190 ... P11838 27139825 PDBbind: -logKd/Ki=2.00, Kd>10.0mM
    16603 4y4j:A (1.03) BS01 LNR 3.4.23.22 GO:0004190 ... P11838 27139825 MOAD: Kd=3.4mM
    PDBbind: -logKd/Ki=2.47, Kd=3.4mM
    16604 4y4v:A (2.04) BS01 DAL ? GO:0008360 ... O25255 26306031 MOAD: Kd=224uM
    PDBbind: -logKd/Ki=3.65, Kd=224uM
    16605 4y4v:A (2.04) BS02 DAL ? GO:0008360 ... O25255 26306031 MOAD: Kd=224uM
    PDBbind: -logKd/Ki=3.65, Kd=224uM
    16606 4y59:A (1.22) BS01 T21 ? GO:0009374 ... P22629 26261872 MOAD: Kd=5.8uM
    PDBbind: -logKd/Ki=5.24, Kd=5.8uM
    16607 4y59:D (1.22) BS01 T21 ? GO:0009374 ... P22629 26261872 MOAD: Kd=5.8uM
    PDBbind: -logKd/Ki=5.24, Kd=5.8uM
    16608 4y5d:A (1.2) BS01 MT6 ? GO:0009374 ... P22629 26261872 MOAD: Kd=1.2uM
    PDBbind: -logKd/Ki=5.92, Kd=1.2uM
    16609 4y5d:B (1.2) BS01 MT6 ? GO:0009374 ... P22629 26261872 MOAD: Kd=1.2uM
    PDBbind: -logKd/Ki=5.92, Kd=1.2uM
    16610 4y5d:D (1.2) BS01 MT6 ? GO:0009374 ... P22629 26261872 MOAD: Kd=1.2uM
    PDBbind: -logKd/Ki=5.92, Kd=1.2uM
    16611 4y5h:A (2.055) BS01 519 2.7.11.24 GO:0004672 ... P53779 25893042 MOAD: ic50=15nM
    PDBbind: -logKd/Ki=7.82, IC50=15nM
    BindingDB: IC50=15nM
    16612 4y5s:A (2.543) BS01 AKG 1.14.11.38 GO:0005575 ... Q4WAW9 26524521 PDBbind: -logKd/Ki=3.73, Kd~185uM
    16613 4y5w:A (3.104) BS01 dna ? GO:0003677 ... P42226 27803324 PDBbind: Kd=79nM
    16614 4y5w:A (3.104) BS02 dna ? GO:0003677 ... P42226 27803324 PDBbind: Kd=79nM
    16615 4y5w:B (3.104) BS01 dna ? GO:0003677 ... P42226 27803324 PDBbind: Kd=79nM
    16616 4y5w:B (3.104) BS02 dna ? GO:0003677 ... P42226 27803324 PDBbind: Kd=79nM
    16617 4y5w:C (3.104) BS01 dna ? GO:0003677 ... P42226 27803324 PDBbind: Kd=79nM
    16618 4y5w:C (3.104) BS02 dna ? GO:0003677 ... P42226 27803324 PDBbind: Kd=79nM
    16619 4y5w:D (3.104) BS01 dna ? GO:0003677 ... P42226 27803324 PDBbind: Kd=79nM
    16620 4y5w:D (3.104) BS02 dna ? GO:0003677 ... P42226 27803324 PDBbind: Kd=79nM
    16621 4y60:C (1.75) BS01 dna ? N/A P43680 26939885 PDBbind: Kd=6.1nM
    16622 4y60:C (1.75) BS02 dna ? N/A P43680 26939885 PDBbind: Kd=6.1nM
    16623 4y62:A (1.6) BS02 48E 2.4.1.37
    2.4.1.40
    GO:0000139 ... P16442 N/A PDBbind: -logKd/Ki=2.95, IC50=1133uM
    16624 4y63:A (1.3) BS02 48O 2.4.1.37
    2.4.1.40
    GO:0000139 ... P16442 N/A PDBbind: -logKd/Ki=3.58, Ki=261uM
    16625 4y64:A (1.6) BS02 48C 2.4.1.37
    2.4.1.40
    GO:0000139 ... P16442 N/A PDBbind: -logKd/Ki=3.10, Ki=790uM
    16626 4y67:A (1.6) BS01 RC5 1.1.1.267 GO:0008299 ... Q8IKG4 25781377 MOAD: ic50=0.117uM
    PDBbind: -logKd/Ki=6.93, IC50=0.117uM
    16627 4y6m:A (2.27) BS01 48Q 3.4.23.39 GO:0004190 ... P46925 26625296 PDBbind: -logKd/Ki=7.15, IC50=0.07uM
    16628 4y6p:A (1.9) BS01 R77 1.1.1.267 GO:0008299 ... Q8IKG4 25781377 MOAD: ic50=0.069uM
    PDBbind: -logKd/Ki=7.16, IC50=0.069uM
    16629 4y6r:A (1.9) BS01 RF7 1.1.1.267 GO:0008299 ... Q8IKG4 25781377 MOAD: ic50=3.3uM
    PDBbind: -logKd/Ki=5.48, IC50=3.3uM
    16630 4y6s:A (2.1) BS02 48S 1.1.1.267 GO:0008299 ... Q8IKG4 25781377 MOAD: ic50=9.3uM
    PDBbind: -logKd/Ki=5.03, IC50=9.3uM
    16631 4y73:A (2.14) BS01 XPY 2.7.11.1 GO:0000287 ... Q9NWZ3 26101574 MOAD: ic50=0.3nM
    PDBbind: -logKd/Ki=9.52, IC50=0.3nM
    BindingDB: IC50=0.300000nM
    16632 4y79:A (2.1) BS03 4O6 3.4.21.6 GO:0004252 ... P00742 17338508 MOAD: Ki=11nM
    PDBbind: -logKd/Ki=7.96, Ki=11nM
    BindingDB: Ki=11nM
    16633 4y83:A (2.89) BS01 49B 2.7.11.25 GO:0004672 ... P41279 25918157 PDBbind: -logKd/Ki=7.77, IC50=17nM
    16634 4y85:A (2.33) BS01 499 2.7.11.25 GO:0004672 ... P41279 25918157 MOAD: ic50=13nM
    PDBbind: -logKd/Ki=7.89, IC50=13nM
    16635 4y87:A (3.1) BS01 49E 3.1.4.35 GO:0004114 ... O76083 26316540 PDBbind: -logKd/Ki=7.24, IC50=58nM
    16636 4y8c:A (2.7) BS01 49D 3.1.4.35 GO:0004114 ... O76083 26316540 PDBbind: -logKd/Ki=7.96, IC50=11nM
    BindingDB: IC50=6.00nM
    16637 4y8d:A (2.1) BS01 49J 2.7.11.1 GO:0004672 ... O14976 25822739 MOAD: Kd=0.0089uM
    PDBbind: -logKd/Ki=8.05, Kd=0.0089uM
    BindingDB: Kd=8.9nM
    16638 4y8x:A (1.9) BS01 4GR 3.4.21.27 GO:0004252 ... P03951 26005539 PDBbind: -logKd/Ki=8.43, Ki=3.7nM
    16639 4y8y:A (2.6) BS01 4D5 3.4.21.27 GO:0004252 ... P03951 26005539 PDBbind: -logKd/Ki=9.15, Ki=0.7nM
    16640 4y8z:A (2.2) BS01 4CE 3.4.21.27 GO:0004252 ... P03951 26005539 PDBbind: -logKd/Ki=10.40, Ki=0.04nM
    BindingDB: Ki=0.040000nM
    16641 4y94:A (2.4) BS01 IHP 2.7.10.2 GO:0035556 ... Q3ZC95 25699547 MOAD: Kd=238nM
    PDBbind: -logKd/Ki=6.62, Kd=238nM
    16642 4y94:A (2.4) BS02 IHP 2.7.10.2 GO:0035556 ... Q3ZC95 25699547 MOAD: Kd=238nM
    PDBbind: -logKd/Ki=6.62, Kd=238nM
    16643 4ya8:A (3.301) BS01 49W 3.4.23.39 GO:0004190 ... P46925 26625296 PDBbind: -logKd/Ki=6.10, IC50=0.8uM
    16644 4yab:A (1.9) BS03 4CN 2.3.2.27 N/A O15164 26061247 MOAD: ic50=8.5uM
    PDBbind: -logKd/Ki=5.07, IC50=8.5uM
    BindingDB: IC50=8500nM
    16645 4yad:A (1.73) BS03 4A7 2.3.2.27 N/A O15164 26061247 MOAD: ic50=2.5uM
    PDBbind: -logKd/Ki=5.60, IC50=2.5uM
    16646 4yas:A (2.0) BS01 CLX 4.1.2.47 GO:0009694 ... P52704 10548044 PDBbind: -logKd/Ki=3.41, Ki=0.39mM
    16647 4yat:A (2.18) BS03 4A8 2.3.2.27 N/A O15164 26061247 MOAD: ic50=9.3uM
    PDBbind: -logKd/Ki=5.03, IC50=9.3uM
    BindingDB: IC50=9300nM
    16648 4yax:A (2.25) BS01 4AE 2.3.2.27 N/A O15164 26061247 MOAD: ic50=1.5uM
    PDBbind: -logKd/Ki=5.82, IC50=1.5uM
    BindingDB: IC50=730nM
    16649 4yay:A (2.9) BS01 ZD7 ? GO:0004930 ... P0ABE7
    P30556
    25913193 PDBbind: -logKd/Ki=8.54, IC50=2.9nM
    16650 4yb5:A (2.24) BS01 HIS 2.4.2.17 GO:0000105 ... Q5HSJ4 27191057 PDBbind: -logKd/Ki=4.71, Kd=19.3uM
    16651 4yb5:E (2.24) BS01 HIS 2.4.2.17 GO:0000105 ... Q5HSJ4 27191057 PDBbind: -logKd/Ki=4.71, Kd=19.3uM
    16652 4yb5:E (2.24) BS02 HIS 2.4.2.17 GO:0000105 ... Q5HSJ4 27191057 PDBbind: -logKd/Ki=4.71, Kd=19.3uM
    16653 4yb6:A (1.98) BS01 AMP 2.4.2.17 GO:0000105 ... Q5HSJ4 27191057 PDBbind: -logKd/Ki=5.32, Kd=4.8uM
    16654 4yb6:D (1.98) BS01 AMP 2.4.2.17 GO:0000105 ... Q5HSJ4 27191057 PDBbind: -logKd/Ki=5.32, Kd=4.8uM
    16655 4yb7:B (2.2) BS02 ATP 2.4.2.17 GO:0000105 ... Q5HSJ4 27191057 PDBbind: -logKd/Ki=3.80, Kd=158uM
    16656 4yb7:C (2.2) BS03 ATP 2.4.2.17 GO:0000105 ... Q5HSJ4 27191057 PDBbind: -logKd/Ki=3.80, Kd=158uM
    16657 4ybi:A (1.84) BS01 4B2 3.4.23.46 GO:0004190 ... P56817 22090477 MOAD: ic50=239nM
    PDBbind: -logKd/Ki=6.60, IC50=249nM
    BindingDB: IC50=270nM, EC50=300nM
    16658 4ybj:A (2.61) BS01 4A9 2.7.10.2 GO:0004672 ... P00523 26895387 PDBbind: -logKd/Ki=9.28, Kd=0.53nM
    16659 4ybk:A (2.5) BS01 4B7 2.7.10.2 GO:0004672 ... P00523 26895387 MOAD: Kd=15nM
    PDBbind: -logKd/Ki=7.82, Kd=15nM
    16660 4ybm:B (1.46) BS01 4BJ 2.3.2.27 N/A O15164 26061247 MOAD: ic50=0.14uM
    PDBbind: -logKd/Ki=6.85, IC50=0.14uM
    BindingDB: EC50=3900nM, IC50=140nM
    16661 4ybm:B (1.46) BS02 4BJ 2.3.2.27 N/A O15164 26061247 MOAD: ic50=0.14uM
    PDBbind: -logKd/Ki=6.85, IC50=0.14uM
    BindingDB: EC50=3900nM, IC50=140nM
    16662 4ybs:A (1.83) BS03 4BK 2.3.2.27 N/A O15164 26061247 MOAD: ic50=0.057uM
    PDBbind: -logKd/Ki=7.24, IC50=0.057uM
    BindingDB: EC50=1300nM, IC50=<10nM
    16663 4ybt:A (1.82) BS03 4BV 2.3.2.27 N/A O15164 26061247 MOAD: ic50=0.1uM
    PDBbind: -logKd/Ki=7.00, IC50=0.1uM
    16664 4yc0:A (1.5) BS01 5OF 2.4.2.31 GO:0000166 ... A3UNN4 26352925 MOAD: Ki=74uM
    PDBbind: -logKd/Ki=4.13, Ki=74uM
    16665 4yc8:A (2.9) BS01 4B7 2.7.10.2 GO:0004672 ... P00519 26895387 PDBbind: -logKd/Ki=7.85, Kd=14nM
    16666 4yc9:A (1.82) BS03 4C1 2.3.2.27 N/A O15164 26061247 MOAD: Kd=1.3nM
    PDBbind: -logKd/Ki=8.89, Kd=1.3nM
    BindingDB: Kd=31nM, IC50=7.6nM, EC50=50nM
    16667 4ycl:A (3.25) BS01 CZA 7.2.2.10 GO:0000166 ... P04191 17389383 PDBbind: -logKd/Ki=8.15, Kd=7nM
    16668 4ycm:A (3.2) BS01 7BS 7.2.2.10 GO:0000166 ... P04191 25957767 PDBbind: -logKd/Ki=7.72, Ki=19nM
    BindingDB: Ki=19nM
    16669 4ycn:A (3.5) BS01 7BL 7.2.2.10 GO:0000166 ... P04191 25957767 PDBbind: -logKd/Ki=7.77, Ki=17nM
    BindingDB: Ki=17nM
    16670 4ycu:A (2.1) BS01 KRS 2.7.7.-
    6.1.1.6
    GO:0000166 ... Q15046 26074468 PDBbind: -logKd/Ki=5.48, Kd=3.3uM
    BindingDB: IC50=>20000nM
    16671 4ycv:A (3.406) BS01 KRS 6.1.1.6 GO:0000049 ... W7JP72 26074468 PDBbind: -logKd/Ki=5.82, Kd=1.5uM
    16672 4ycw:A (2.9) BS04 KRS 2.7.7.-
    6.1.1.6
    GO:0000166 ... Q15046 N/A PDBbind: -logKd/Ki=5.68, Kd=2.1uM
    BindingDB: IC50=>20000nM
    16673 4ydf:A (2.804) BS01 4B1 ? GO:0004190 ... Q82134 26000468 PDBbind: -logKd/Ki=5.10, Ki=7.9uM
    16674 4ydf:B (2.804) BS01 4B1 ? GO:0004190 ... Q82134 26000468 PDBbind: -logKd/Ki=5.10, Ki=7.9uM
    16675 4ydg:A (3.25) BS01 G3G 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    GO:0004190 ... P03362 26000468 PDBbind: -logKd/Ki=7.82, Ki=0.015uM
    16676 4ydg:B (3.25) BS01 G3G 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    GO:0004190 ... P03362 26000468 PDBbind: -logKd/Ki=7.82, Ki=0.015uM
    16677 4ydn:A (1.35) BS01 2WN ? GO:0005179 ... P02766 26051248 PDBbind: -logKd/Ki=8.64, Kd=2.3nM
    16678 4ydn:B (1.35) BS01 2WN ? GO:0005179 ... P02766 26051248 PDBbind: -logKd/Ki=8.64, Kd=2.3nM
    16679 4ydq:A (2.3) BS02 HFG 6.1.1.15 GO:0000166 ... Q8I5R7 25817387 MOAD: Kd~300nM
    PDBbind: -logKd/Ki=6.52, Kd~300nM
    16680 4ydq:B (2.3) BS02 HFG 6.1.1.15 GO:0000166 ... Q8I5R7 25817387 MOAD: Kd~300nM
    PDBbind: -logKd/Ki=6.52, Kd~300nM
    16681 4ye3:A (1.35) BS01 G04 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03366 26010498 PDBbind: -logKd/Ki=8.37, Ki=4.3nM
    16682 4ye3:B (1.35) BS01 G04 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03366 26010498 MOAD: Ki=4.3nM
    PDBbind: -logKd/Ki=8.37, Ki=4.3nM
    16683 4yes:B (1.5) BS04 45S 3.4.21.5 GO:0004252 ... P00734 26005532 MOAD: Ki=9.6nM
    PDBbind: -logKd/Ki=8.02, Ki=9.6nM
    16684 4yff:A (3.07) BS01 4CV 2.7.11.1 GO:0004672 ... Q59H18 26355916 PDBbind: -logKd/Ki=8.00, IC50<10nM
    BindingDB: IC50=<10.0nM
    16685 4yfi:A (2.7) BS01 4CW 2.7.11.1 GO:0004672 ... Q59H18 26355916 PDBbind: -logKd/Ki=6.30, IC50=500nM
    BindingDB: IC50=500nM, Kd=111nM
    16686 4ygf:A (2.0) BS02 AZM ? GO:0004089 ... A0A0M3KL20 26010545 MOAD: Ki=21nM
    PDBbind: -logKd/Ki=7.68, Ki=21nM
    16687 4ygi:A (2.6) BS01 dna 2.1.1.-
    2.1.1.367
    N/A O82175 26841909 PDBbind: Kd=1.5uM
    16688 4yh3:A (1.6) BS01 Y80 ? N/A O60885 26022843 MOAD: ic50=26uM
    PDBbind: -logKd/Ki=4.59, IC50=26uM
    BindingDB: IC50=26000nM
    16689 4yh4:A (1.33) BS01 Y81 ? N/A O60885 26022843 MOAD: ic50=26uM
    PDBbind: -logKd/Ki=4.59, IC50=26uM
    BindingDB: IC50=26000nM
    16690 4yha:A (2.2) BS02 MZM ? GO:0004089 ... A0A0M3KL20 26010545 MOAD: Ki=225nM
    PDBbind: -logKd/Ki=6.65, Ki=225nM
    16691 4yhf:A (2.2) BS01 4C9 2.7.10.2 GO:0004672 ... Q06187 26006010 PDBbind: -logKd/Ki=8.34, IC50=4.6nM
    16692 4yhm:H (2.16) BS01 4CC N/A N/A N/A 26047352 MOAD: Kd=173pM
    PDBbind: -logKd/Ki=9.76, Kd=173pM
    16693 4yhm:L (2.16) BS01 4CC N/A N/A N/A 26047352 PDBbind: -logKd/Ki=9.76, Kd=173pM
    16694 4yho:H (1.82) BS01 4CC N/A N/A N/A 26047352 MOAD: Kd=18pM
    PDBbind: -logKd/Ki=10.74, Kd=18pM
    16695 4yho:L (1.82) BS01 4CC N/A N/A N/A 26047352 PDBbind: -logKd/Ki=10.74, Kd=18pM
    16696 4yhq:A (1.3) BS01 G10 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03366 26010498 MOAD: Ki=1.7nM
    PDBbind: -logKd/Ki=8.77, Ki=1.7nM
    16697 4yhq:B (1.3) BS01 G10 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16
    GO:0004190 ... P03366 26010498 PDBbind: -logKd/Ki=8.77, Ki=1.7nM
    16698 4yht:A (3.05) BS01 4EF 2.7.11.1 GO:0004672 ... P15056 27246618 PDBbind: -logKd/Ki=9.22, IC50=0.6nM
    BindingDB: IC50=0.600000nM
    16699 4yhw:A (3.25) BS01 rna ? GO:0000398 ... Q03338 26161500 PDBbind: Kd=110nM
    16700 4yhw:B (3.25) BS01 rna ? GO:0000398 ... Q03338 26161500 PDBbind: Kd=110nM
    16701 4yih:A (1.82) BS02 2O2 3.1.3.- GO:0000166 ... Q8TCD5 N/A PDBbind: -logKd/Ki=4.66, Ki=21.7uM
    16702 4yih:B (1.82) BS02 2O2 3.1.3.- GO:0000166 ... Q8TCD5 N/A PDBbind: -logKd/Ki=4.66, Ki=21.7uM
    16703 4yik:A (1.483) BS02 2O2 3.1.3.- GO:0008253 ... Q9NPB1 N/A PDBbind: -logKd/Ki=6.89, Ki=0.128uM
    16704 4yir:A (3.0501) BS01 dna ? GO:0003677 ... P14736 25562780 PDBbind: Kd=430nM
    16705 4yir:A (3.0501) BS02 dna ? GO:0003677 ... P14736 25562780 PDBbind: Kd=430nM
    16706 4yjn:A (2.6) BS01 UW4 ? GO:0004672 ... Q9BJF5 26693272 PDBbind: -logKd/Ki=7.92, IC50=12nM
    BindingDB: IC50=12nM
    16707 4yk5:A (1.42) BS01 4DV 1.11.1.-
    2.5.1.18
    5.3.99.3
    GO:0001516 ... O14684 25961169 MOAD: ic50=0.96uM
    PDBbind: -logKd/Ki=7.64, IC50=0.023uM
    BindingDB: IC50=3nM
    16708 4ykj:A (1.401) BS01 ALA ? GO:0015276 ... A0A0R4I973 26460032 MOAD: Ki=37uM
    PDBbind: -logKd/Ki=4.43, Ki=37uM
    16709 4ykk:A (1.38) BS02 DSN ? GO:0015276 ... A0A0R4I973 26460032 MOAD: Ki=1.7mM
    PDBbind: -logKd/Ki=2.77, Ki=1.7mM
    16710 4ykn:A (2.9) BS01 4EL 2.7.11.1
    2.7.1.137
    2.7.1.153
    GO:0001525 ... P27986
    P42336
    26005528 PDBbind: -logKd/Ki=8.00, IC50=10nM
    16711 4ykn:A (2.9) BS02 4EL 2.7.11.1
    2.7.1.137
    2.7.1.153
    GO:0001525 ... P27986
    P42336
    26005528 PDBbind: -logKd/Ki=8.00, IC50=10nM
    16712 4ykn:A (2.9) BS03 4EL 2.7.11.1
    2.7.1.137
    2.7.1.153
    GO:0001525 ... P27986
    P42336
    26005528 PDBbind: -logKd/Ki=8.00, IC50=10nM
    16713 4yl0:A (1.52) BS01 4DZ 1.11.1.-
    2.5.1.18
    5.3.99.3
    GO:0001516 ... O14684 25961169 MOAD: ic50=1.59uM
    PDBbind: -logKd/Ki=8.22, IC50=0.006uM
    BindingDB: IC50=1nM
    16714 4yl1:A (1.41) BS01 4U8 1.11.1.-
    2.5.1.18
    5.3.99.3
    GO:0001516 ... O14684 25961169 MOAD: ic50=2.58uM
    PDBbind: -logKd/Ki=6.67, IC50=0.216uM
    BindingDB: IC50=216nM
    16715 4yl3:A (1.41) BS01 4U9 1.11.1.-
    2.5.1.18
    5.3.99.3
    GO:0001516 ... O14684 25961169 MOAD: ic50=3.94uM
    PDBbind: -logKd/Ki=8.15, IC50=0.007uM
    16716 4ylj:A (2.58) BS01 4E1 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 25730262 PDBbind: -logKd/Ki=8.22, IC50=0.006uM
    BindingDB: IC50=6.0nM
    16717 4ylk:A (1.4) BS01 4E2 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 25730262 MOAD: ic50=0.18uM
    PDBbind: -logKd/Ki=6.74, IC50=0.18uM
    BindingDB: IC50=180nM
    16718 4yll:A (1.4) BS01 4E3 2.7.11.23
    2.7.12.1
    GO:0004672 ... Q13627 25730262 MOAD: ic50=0.12uM
    PDBbind: -logKd/Ki=6.92, IC50=0.12uM
    BindingDB: IC50=120nM
    16719 4ylu:A (2.1) BS01 R30 3.4.19.12 GO:0008233 ... V9TU12 26055715 PDBbind: -logKd/Ki=4.00, IC50>100uM
    16720 4ylu:B (2.1) BS01 R30 3.4.19.12 GO:0008233 ... V9TU12 26055715 PDBbind: -logKd/Ki=4.00, IC50>100uM
    16721 4ym2:A (2.1) BS01 BGC ? GO:0030246 ... P56470 26077389 PDBbind: -logKd/Ki=2.85, Kd=1400uM
    16722 4ym2:A (2.1) BS02 SGA ? GO:0030246 ... P56470 26077389 PDBbind: -logKd/Ki=2.85, Kd=1400uM
    16723 4ymb:A (1.93) BS01 4E7 ? GO:0015276 ... P22756 26200741 MOAD: Ki=0.62uM
    PDBbind: -logKd/Ki=6.21, Ki=0.62uM
    16724 4ymg:A (1.899) BS01 SAM ? GO:0008168 ... Q9HGR1 25979334 MOAD: Kd=21uM
    PDBbind: -logKd/Ki=4.68, Kd=21uM
    16725 4ymh:A (1.876) BS01 SAH ? GO:0008168 ... Q9HGR1 25979334 MOAD: Kd=3.2uM
    PDBbind: -logKd/Ki=6.46, Kd=0.35uM
    16726 4ymj:A (2.0) BS01 4EJ 2.7.10.1 GO:0004672 ... Q16288 26005534 MOAD: ic50=0.1uM
    PDBbind: -logKd/Ki=7.00, IC50=0.1uM
    BindingDB: IC50=100nM
    16727 4yml:A (1.75) BS01 4F0 3.2.2.9 GO:0003824 ... P0AF12 26260335 MOAD: Ki=4.5nM
    PDBbind: -logKd/Ki=8.35, Ki=4.5nM
    16728 4ymq:A (2.0) BS01 ZBD ? GO:0003677 ... P51449 25840886 MOAD: Kd=1.6uM
    PDBbind: -logKd/Ki=5.80, Kd=1.6uM
    BindingDB: Kd=1600nM, IC50=5700nM
    16729 4ymx:A (1.481) BS01 ARG ? GO:0015276 ... Q8RCC4 25848002 MOAD: Kd=79nM
    PDBbind: -logKd/Ki=7.10, Kd=79nM
    16730 4ynb:A (2.0) BS01 4EH 3.2.2.30
    3.2.2.9
    GO:0003824 ... Q9ZMY2 26494017 MOAD: Ki=0.043nM
    PDBbind: -logKd/Ki=10.37, Ki=0.043nM
    16731 4ynd:A (2.79) BS04 4GQ 2.1.1.-
    2.1.1.354
    GO:0000122 ... Q9NRG4 26101576 PDBbind: -logKd/Ki=8.55, IC50=2.8nM
    BindingDB: IC50=2.8nM
    16732 4yne:A (2.0229) BS01 4EK 2.7.10.1 GO:0004672 ... P04629 26005534 PDBbind: -logKd/Ki=8.52, IC50=0.003uM
    BindingDB: IC50=3.0nM
    16733 4ynk:A (2.3) BS02 YW2 ? GO:0003677 ... P13053 26613420 PDBbind: -logKd/Ki=8.30, IC50=5nM
    16734 4yo6:A (2.32) BS01 4GD 2.7.11.1 GO:0000287 ... Q9NWZ3 26101573 PDBbind: -logKd/Ki=5.66, IC50=2.2uM
    BindingDB: IC50=2200nM
    16735 4yo8:A (2.1) BS01 4EZ 3.2.2.30
    3.2.2.9
    GO:0003824 ... Q9ZMY2 26494017 MOAD: Ki=0.03nM
    PDBbind: -logKd/Ki=10.52, Ki=0.030nM
    16736 4yo8:B (2.1) BS01 4EZ 3.2.2.30
    3.2.2.9
    GO:0003824 ... Q9ZMY2 26494017 MOAD: Ki=0.03nM
    PDBbind: -logKd/Ki=10.52, Ki=0.030nM
    16737 4yog:A (2.0) BS01 4F5 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0C6W3 26190463 MOAD: ic50=1.8uM
    PDBbind: -logKd/Ki=5.74, IC50=1.8uM
    16738 4yog:B (2.0) BS01 4F5 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0C6W3 26190463 MOAD: ic50=1.8uM
    PDBbind: -logKd/Ki=5.74, IC50=1.8uM
    16739 4yoi:A (1.82) BS01 4F4 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0C6W3 26190463 MOAD: ic50=0.33uM
    PDBbind: -logKd/Ki=6.48, IC50=0.33uM
    16740 4yoi:B (1.82) BS01 4F4 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0C6W3 26190463 MOAD: ic50=0.33uM
    PDBbind: -logKd/Ki=6.48, IC50=0.33uM
    16741 4yoj:A (1.9) BS01 RFM 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0C6W3 26190463 MOAD: ic50=0.41uM
    PDBbind: -logKd/Ki=6.39, IC50=0.41uM
    16742 4yoj:B (1.9) BS01 RFM 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.6.4.12
    3.6.4.13
    4.6.1.-
    GO:0008233 ... P0C6W3 26190463 MOAD: ic50=0.41uM
    PDBbind: -logKd/Ki=6.39, IC50=0.41uM
    16743 4yp1:A (2.65) BS01 2BA ? GO:0002218 ... Q3TBT3 26171638 PDBbind: -logKd/Ki=5.04, Kd=9.1uM
    16744 4yp1:B (2.65) BS01 2BA ? GO:0002218 ... Q3TBT3 26171638 PDBbind: -logKd/Ki=5.04, Kd=9.1uM
    16745 4yp8:A (2.641) BS01 4GF 2.7.11.1 GO:0000287 ... Q9NWZ3 26101573 PDBbind: -logKd/Ki=7.89, IC50=13nM
    BindingDB: IC50=13nM
    16746 4ypf:A (2.2) BS02 4FS 6.1.1.21 GO:0004821 ... Q4DA54 26249349 PDBbind: -logKd/Ki=2.70, IC50>2mM
    16747 4yps:A (2.1012) BS01 4F6 2.7.10.1 GO:0004672 ... P04629 26005534 PDBbind: -logKd/Ki=7.12, IC50=0.075uM
    BindingDB: IC50=75nM
    16748 4yqh:A (2.308) BS03 4F7 3.1.4.17 GO:0004114 ... Q9Y233 25863433 MOAD: ic50=0.009uM
    PDBbind: -logKd/Ki=8.05, IC50=0.009uM
    BindingDB: IC50=<500nM
    16749 4yqm:A (2.38) BS01 4G9 1.20.4.2
    1.8.5.1
    2.5.1.18
    GO:0004364 ... P78417 27703239 PDBbind: -logKd/Ki=7.51, IC50=31nM
    BindingDB: Ki=440nM, IC50=130nM
    16750 4yqu:A (1.94) BS01 4GB 1.20.4.2
    1.8.5.1
    2.5.1.18
    GO:0004364 ... P78417 27703239 PDBbind: -logKd/Ki=6.66, IC50=0.221uM
    16751 4yqv:A (2.06) BS01 4GG 1.20.4.2
    1.8.5.1
    2.5.1.18
    GO:0004364 ... P78417 27703239 PDBbind: -logKd/Ki=5.71, IC50=1.95uM
    16752 4yrc:A (2.1) BS02 0P6 6.1.1.21 GO:0004821 ... Q4DA54 26249349 PDBbind: -logKd/Ki=2.70, IC50>2mM
    16753 4yrc:A (2.1) BS03 0P6 6.1.1.21 GO:0004821 ... Q4DA54 26249349 PDBbind: -logKd/Ki=2.70, IC50>2mM
    16754 4yrd:A (2.44) BS02 3IT ? GO:0046872 ... A0A0H3JP37 26471247 MOAD: Kd=27uM
    PDBbind: -logKd/Ki=4.57, Kd=27uM
    16755 4yrg:A (2.15) BS02 4HU 6.1.1.21 GO:0004821 ... Q4DA54 26249349 PDBbind: -logKd/Ki=2.70, IC50>2mM
    16756 4yrr:A (2.3) BS02 691 6.1.1.21 GO:0004821 ... Q4DA54 26249349 PDBbind: -logKd/Ki=2.70, IC50>2mM
    16757 4yrs:A (2.75) BS02 4JS 6.1.1.21 GO:0004821 ... Q4DA54 26249349 PDBbind: -logKd/Ki=3.07, IC50=0.85mM
    16758 4yrt:A (2.05) BS02 781 6.1.1.21 GO:0004821 ... Q4DA54 26249349 PDBbind: -logKd/Ki=2.78, IC50=1.65mM
    16759 4ys7:A (2.502) BS02 4GK 3.1.4.17 GO:0004114 ... Q9Y233 25863433 MOAD: ic50=0.001uM
    PDBbind: -logKd/Ki=9.00, IC50=0.001uM
    BindingDB: IC50=<10nM
    16760 4ysl:A (1.4618) BS02 GSH ? GO:0006749 ... A5VWI3 26082492 MOAD: Kd=1.6uM
    PDBbind: -logKd/Ki=5.80, Kd=1.6uM
    16761 4ysl:B (1.4618) BS02 GSH ? GO:0006749 ... A5VWI3 26082492 MOAD: Kd=1.6uM
    PDBbind: -logKd/Ki=5.80, Kd=1.6uM
    16762 4yt6:H (2.07) BS01 4JY 3.4.21.21 GO:0004252 ... P08709 25881820 MOAD: Ki=11nM
    PDBbind: -logKd/Ki=7.96, Ki=11nM
    BindingDB: Ki=11nM
    16763 4yt7:H (2.3) BS01 4K1 3.4.21.21 GO:0004252 ... P08709 25881820 MOAD: Ki=1.7nM
    PDBbind: -logKd/Ki=8.77, Ki=1.7nM
    BindingDB: Ki=1.7nM
    16764 4ytc:A (2.16) BS01 4HW 2.7.10.2 GO:0004672 ... O60674 26230873 PDBbind: -logKd/Ki=7.89, Ki=0.013uM
    16765 4ytf:A (1.78) BS01 4HZ 2.7.10.2 GO:0004672 ... O60674 26230873 MOAD: Ki=0.007uM
    PDBbind: -logKd/Ki=8.15, Ki=0.007uM
    16766 4yth:A (2.04) BS01 467 2.7.10.2 GO:0004672 ... O60674 26230873 MOAD: Ki=0.002uM
    PDBbind: -logKd/Ki=8.70, Ki=0.002uM
    16767 4yti:A (2.52) BS01 VJK 2.7.10.2 GO:0004672 ... O60674 26230873 PDBbind: -logKd/Ki=7.89, Ki=13nM
    BindingDB: IC50=>10000nM, Ki=13nM
    16768 4yur:A (2.65) BS01 4J7 2.7.11.21 GO:0004672 ... O00444 25931445 PDBbind: -logKd/Ki=9.80, Ki=0.16nM
    16769 4yuw:A (1.97) BS02 4JU 2.5.1.16 GO:0003824 ... Q4DA73 26327378 MOAD: ic50=1.7uM
    PDBbind: -logKd/Ki=5.77, IC50=1.7uM
    16770 4yux:A (1.6) BS02 4JT 2.5.1.16 GO:0003824 ... Q4DA73 26327378 MOAD: ic50=180uM
    PDBbind: -logKd/Ki=3.74, IC50=180uM
    16771 4yuy:A (1.58) BS02 1SQ 2.5.1.16 GO:0003824 ... Q4DA73 26327378 MOAD: ic50=460uM
    PDBbind: -logKd/Ki=3.34, IC50=460uM
    16772 4yuz:A (1.97) BS02 4JV 2.5.1.16 GO:0003824 ... Q4DA73 26327378 PDBbind: -logKd/Ki=5.04, IC50=9.1uM
    16773 4yuz:B (1.97) BS02 4JV 2.5.1.16 GO:0003824 ... Q4DA73 26327378 MOAD: ic50=9.1uM
    PDBbind: -logKd/Ki=5.04, IC50=9.1uM
    16774 4yv0:A (1.95) BS02 4JW 2.5.1.16 GO:0003824 ... Q4DA73 26327378 PDBbind: -logKd/Ki=3.28, IC50=530uM
    16775 4yv0:B (1.95) BS02 4JW 2.5.1.16 GO:0003824 ... Q4DA73 26327378 MOAD: ic50=530uM
    PDBbind: -logKd/Ki=3.28, IC50=530uM
    16776 4yv1:A (1.85) BS02 4K2 2.5.1.16 GO:0003824 ... Q4DA73 26327378 PDBbind: -logKd/Ki=3.08, IC50=830uM
    16777 4yv1:B (1.85) BS02 4K2 2.5.1.16 GO:0003824 ... Q4DA73 26327378 MOAD: ic50=830uM
    PDBbind: -logKd/Ki=3.08, IC50=830uM
    16778 4yv2:A (2.17) BS02 4K3 2.5.1.16 GO:0003824 ... Q4DA73 26327378 PDBbind: -logKd/Ki=7.29, IC50=0.051uM
    16779 4yv2:B (2.17) BS02 4K3 2.5.1.16 GO:0003824 ... Q4DA73 26327378 PDBbind: -logKd/Ki=7.29, IC50=0.051uM
    16780 4yv5:A (1.9) BS01 SVR ? GO:0004623 ... Q9I834 26457430 MOAD: Kd=0.6uM
    PDBbind: -logKd/Ki=6.22, Kd=0.6uM
    16781 4yv5:A (1.9) BS02 SVR ? GO:0004623 ... Q9I834 26457430 MOAD: Kd=0.6uM
    PDBbind: -logKd/Ki=6.22, Kd=0.6uM
    16782 4yv5:B (1.9) BS01 SVR ? GO:0004623 ... Q9I834 26457430 MOAD: Kd=0.6uM
    PDBbind: -logKd/Ki=6.22, Kd=0.6uM
    16783 4yv5:B (1.9) BS02 SVR ? GO:0004623 ... Q9I834 26457430 MOAD: Kd=0.6uM
    PDBbind: -logKd/Ki=6.22, Kd=0.6uM
    16784 4yvc:A (3.2) BS01 4KH 2.7.11.1 GO:0004672 ... Q13464 26039570 PDBbind: -logKd/Ki=5.96, Ki=1.1uM
    BindingDB: Ki=1100nM
    16785 4yve:A (3.4) BS01 4KK 2.7.11.1 GO:0004672 ... Q13464 26039570 PDBbind: -logKd/Ki=7.00, Ki=100nM
    BindingDB: Ki=100nM
    16786 4yvz:A (2.495) BS02 3AT 2.7.7.85 GO:0003677 ... Q9WY43 26014055 MOAD: ic50=3uM
    PDBbind: -logKd/Ki=5.52, IC50=3uM
    16787 4yvz:B (2.495) BS01 3AT 2.7.7.85 GO:0003677 ... Q9WY43 26014055 MOAD: ic50=3uM
    PDBbind: -logKd/Ki=5.52, IC50=3uM
    16788 4yw2:A (2.0) BS01 SIA 3.2.1.18 GO:0004308 ... A0A0H2UQE4 26370075 PDBbind: -logKd/Ki=2.80, Kd=1.6mM
    16789 4yw6:A (1.4) BS02 G0P ? GO:0005737 ... Q05097 26295304 PDBbind: -logKd/Ki=7.08, Kd=83nM
    16790 4yw7:C (1.82) BS01 4J0 ? GO:0005737 ... Q05097 26295304 MOAD: Kd=130nM
    PDBbind: -logKd/Ki=6.89, Kd=130nM
    16791 4ywa:A (1.192) BS02 4J9 ? GO:0005737 ... Q05097 26295304 MOAD: Kd=28nM
    PDBbind: -logKd/Ki=7.55, Kd=28nM
    16792 4ywa:B (1.192) BS01 4J9 ? GO:0005737 ... Q05097 26295304 PDBbind: -logKd/Ki=7.55, Kd=28nM
    16793 4yx4:A (1.01) BS02 FB2 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 26700575 MOAD: Kd=1073.4nM
    PDBbind: -logKd/Ki=5.97, Kd=1073.4nM
    BindingDB: Ki=1103nM, Kd=1149700nM
    16794 4yx9:A (1.75) BS01 4HY ? GO:0016787 ... A0A0M3KL26 26136396 MOAD: Ki=4.5uM
    PDBbind: -logKd/Ki=5.35, Ki=4.5uM
    16795 4yx9:B (1.75) BS01 4HY ? GO:0016787 ... A0A0M3KL26 26136396 MOAD: Ki=4.5uM
    PDBbind: -logKd/Ki=5.35, Ki=4.5uM
    16796 4yxd:B (3.0) BS04 FTN 1.3.5.1 GO:0005515 ... Q007T0 26198225 PDBbind: -logKd/Ki=4.34, IC50=45.9uM
    16797 4yxd:C (3.0) BS02 FTN ? GO:0005515 ... D0VWV4 26198225 PDBbind: -logKd/Ki=4.34, IC50=45.9uM
    16798 4yxd:D (3.0) BS02 FTN ? GO:0005515 ... A5GZW8 26198225 PDBbind: -logKd/Ki=4.34, IC50=45.9uM
    16799 4yxi:A (0.96) BS02 4J8 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 26700575 MOAD: Kd=318.8nM
    PDBbind: -logKd/Ki=6.50, Kd=318.8nM
    BindingDB: Ki=320nM, Kd=0.060000nM, IC50=580nM
    16800 4yxi:A (0.96) BS03 4J8 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 26700575 MOAD: Kd=318.8nM
    PDBbind: -logKd/Ki=6.50, Kd=318.8nM
    BindingDB: Ki=320nM, Kd=0.060000nM, IC50=580nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218