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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    15201 4pgh:A (2.8) BS01 SAM 2.1.1.68 GO:0005634 ... C5YH12 24948836 PDBbind: -logKd/Ki=4.89, Kd=13uM
    15202 4ph4:B (2.8) BS01 2UG 2.7.1.137 GO:0016301 ... Q8NEB9 25327288 PDBbind: -logKd/Ki=7.74, IC50=18nM
    BindingDB: IC50=18nM
    15203 4phu:A (2.332) BS01 2YB 3.2.1.17 GO:0003796 ... O14842
    P00720    		 25043059 MOAD: Kd=12.04nM
    PDBbind: -logKd/Ki=7.92, Kd=12.04nM
    15204 4phv:A (2.1) BS01 VAC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P12497 N/A PDBbind: -logKd/Ki=9.17, IC50=0.67nM
    15205 4phv:A (2.1) BS02 VAC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P12497 N/A PDBbind: -logKd/Ki=9.17, IC50=0.67nM
    15206 4phv:B (2.1) BS01 VAC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P12497 N/A MOAD: ic50=0.67nM
    PDBbind: -logKd/Ki=9.17, IC50=0.67nM
    15207 4phv:B (2.1) BS02 VAC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P12497 N/A MOAD: ic50=0.67nM
    PDBbind: -logKd/Ki=9.17, IC50=0.67nM
    15208 4phw:A (2.5) BS02 2W1 3.1.4.17 GO:0004114 ... Q9Y233 25062128 MOAD: ic50=0.1nM
    PDBbind: -logKd/Ki=10.00, IC50=0.1nM
    BindingDB: IC50=0.17nM
    15209 4pid:A (1.59) BS02 2UQ 3.4.22.39 GO:0003677 ... P03252 25147618 PDBbind: -logKd/Ki=4.62, IC50=24uM
    15210 4pin:A (1.9) BS01 AVI 2.1.1.44 GO:0008168 ... A0R5M8 25404173 MOAD: Kd=4uM
    PDBbind: -logKd/Ki=5.40, Kd=4uM
    15211 4pio:A (1.506) BS02 AVI 2.1.1.44 GO:0008168 ... A0R5M8 25404173 MOAD: Kd=2uM
    PDBbind: -logKd/Ki=5.70, Kd=2uM
    15212 4piq:A (2.07) BS02 3FS 3.4.22.39 GO:0003677 ... B9A5C1 25147618 PDBbind: -logKd/Ki=7.10, IC50=0.08uM
    15213 4pis:A (2.1) BS02 3FU 3.4.22.39 GO:0003677 ... B9A5C1 25147618 PDBbind: -logKd/Ki=7.22, IC50=0.06uM
    15214 4pji:A (2.5) BS01 30W ? N/A Q95460 25049336 PDBbind: -logKd/Ki=3.70, Kd>200uM
    15215 4pjt:A (2.35) BS01 2YQ 2.4.2.-
    2.4.2.30    		 GO:0003950 ... P09874 25195882 MOAD: ic50=0.57nM
    PDBbind: -logKd/Ki=9.24, IC50=0.57nM
    BindingDB: Ki=1.2nM, IC50=0.570000nM, EC50=2.5nM
    15216 4pkb:A (2.09) BS01 MAY 3.1.1.- GO:0006629 ... Q8LPW4 25248161 PDBbind: -logKd/Ki=6.94, IC50=0.116uM
    15217 4pkr:A (2.2) BS01 2ZL 3.4.24.83 GO:0008237 ... P15917 25372673 MOAD: ic50=15.2uM
    PDBbind: -logKd/Ki=4.82, IC50=15.2uM
    15218 4pks:A (2.3) BS02 30H 3.4.24.83 GO:0008237 ... P15917 25372673 MOAD: ic50=15.2uM
    PDBbind: -logKd/Ki=4.82, IC50=15.2uM
    15219 4pkt:A (2.4) BS01 30O 3.4.24.83 GO:0008237 ... P15917 25372673 MOAD: ic50=14.9uM
    PDBbind: -logKd/Ki=4.83, IC50=14.9uM
    15220 4pku:A (2.4) BS01 30P 3.4.24.83 GO:0008237 ... P15917 25372673 MOAD: ic50=30uM
    PDBbind: -logKd/Ki=4.52, IC50=30.0uM
    15221 4pkv:A (2.5) BS01 30R 3.4.24.83 GO:0008237 ... P15917 25372673 MOAD: ic50=5.6uM
    PDBbind: -logKd/Ki=5.25, IC50=5.6uM
    15222 4pkw:A (1.75) BS02 GM6 3.4.24.83 GO:0008237 ... P15917 25372673 MOAD: ic50=22.5uM
    PDBbind: -logKd/Ki=4.65, IC50=22.5uM
    15223 4pl0:A (2.7) BS01 ANP ? GO:0005524 ... Q9X2W0 24920594 PDBbind: -logKd/Ki=4.40, IC50=39.5uM
    15224 4pl0:A (2.7) BS03 ANP ? GO:0005524 ... Q9X2W0 24920594 PDBbind: -logKd/Ki=4.40, IC50=39.5uM
    15225 4pl0:B (2.7) BS01 ANP ? GO:0005524 ... Q9X2W0 24920594 PDBbind: -logKd/Ki=4.40, IC50=39.5uM
    15226 4pl0:B (2.7) BS02 ANP ? GO:0005524 ... Q9X2W0 24920594 PDBbind: -logKd/Ki=4.40, IC50=39.5uM
    15227 4pl3:A (2.9) BS01 31J 2.7.11.1
    3.1.26.-    		 GO:0004521 ... Q9EQY0 25164867 PDBbind: -logKd/Ki=6.54, IC50=0.29uM
    15228 4pl4:A (3.0) BS01 31K 2.7.11.1
    3.1.26.-    		 GO:0004521 ... Q9EQY0 25164867 PDBbind: -logKd/Ki=5.27, IC50=5.4uM
    15229 4pl5:A (3.4) BS01 31L 2.7.11.1
    3.1.26.-    		 GO:0004521 ... Q9EQY0 25164867 PDBbind: -logKd/Ki=4.96, IC50=11uM
    15230 4pm0:A (2.1) BS02 32V 3.1.4.53 GO:0004114 ... Q13946 25383422 MOAD: ic50=45nM
    PDBbind: -logKd/Ki=7.35, IC50=45nM
    BindingDB: IC50=45nM
    15231 4pml:A (1.87) BS02 3AB 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 25286857 PDBbind: -logKd/Ki=4.52, IC50>30uM
    15232 4pmm:A (2.0) BS01 31V 2.7.10.1 GO:0004672 ... P04629 24914455 MOAD: Kd=27nM
    PDBbind: -logKd/Ki=7.57, Kd=27nM
    BindingDB: IC50=662nM, Kd=27nM
    15233 4pmp:A (1.8) BS01 31W 2.7.10.1 GO:0004672 ... P04629 24914455 MOAD: Kd~400nM
    PDBbind: -logKd/Ki=6.40, Kd~400nM
    BindingDB: Kd=400nM, IC50=549nM
    15234 4pms:A (2.8) BS01 31X 2.7.10.1 GO:0004672 ... P04629 24914455 PDBbind: -logKd/Ki=8.10, Kd=7.9nM
    BindingDB: IC50=2300nM, Kd=7.9nM
    15235 4pmt:A (2.1) BS01 31Y 2.7.10.1 GO:0004672 ... P04629 24914455 MOAD: ic50=997nM
    PDBbind: -logKd/Ki=6.00, IC50=997nM
    BindingDB: IC50=997nM
    15236 4pmw:A (2.95) BS01 rna 3.1.13.- GO:0000175 ... Q8CI75 25119025 PDBbind: Kd=9pM
    15237 4pmw:B (2.95) BS01 rna 3.1.13.- GO:0000175 ... Q8CI75 25119025 PDBbind: Kd=9pM
    15238 4pnc:A (1.54) BS01 7NP 3.4.11.18 GO:0004177 ... C3TPN7 25293447 PDBbind: -logKd/Ki=5.43, IC50=3.7uM
    15239 4pni:A (1.85) BS01 KQQ 2.7.11.14 GO:0001750 ... P28327 25238254 MOAD: ic50=0.125uM
    PDBbind: -logKd/Ki=6.09, IC50=0.81uM
    BindingDB: IC50=130nM
    15240 4pnk:A (2.56) BS01 KZQ 2.7.11.15 GO:0001664 ... P25098 25238254 PDBbind: -logKd/Ki=6.60, IC50=0.25uM
    15241 4pnl:A (1.5) BS02 DRL 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 25286857 PDBbind: -logKd/Ki=5.52, IC50=3.0uM
    15242 4pnm:A (2.19) BS02 NU1 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 25286857 PDBbind: -logKd/Ki=5.85, IC50=1.4uM
    15243 4pnn:A (1.65) BS02 JPZ 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 25286857 PDBbind: -logKd/Ki=4.52, IC50>30uM
    15244 4pnq:A (1.85) BS02 32X 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 25286857 PDBbind: -logKd/Ki=5.00, IC50=10uM
    15245 4pnr:A (1.71) BS02 G18 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 25286857 PDBbind: -logKd/Ki=6.34, IC50=0.456uM
    15246 4pns:A (1.65) BS02 32Y 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 25286857 PDBbind: -logKd/Ki=4.52, IC50>30uM
    15247 4pnt:A (1.6) BS02 IQD 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 25286857 PDBbind: -logKd/Ki=5.82, IC50=1.5uM
    15248 4pnu:A (1.9) BS01 2VD N/A GO:0003677 ... N/A 25970224 PDBbind: -logKd/Ki=4.89, Kd=13uM
    15249 4pnw:B (2.0) BS01 2VM N/A GO:0003677 ... N/A 25970224 PDBbind: -logKd/Ki=5.05, Kd=9uM
    15250 4po0:A (2.73) BS01 NPS ? GO:0003677 ... G1U9S2 24753230 PDBbind: -logKd/Ki=6.92, Kd=0.12uM
    15251 4po0:A (2.73) BS02 NPS ? GO:0003677 ... G1U9S2 24753230 PDBbind: -logKd/Ki=6.92, Kd=0.12uM
    15252 4po0:A (2.73) BS03 NPS ? GO:0003677 ... G1U9S2 24753230 PDBbind: -logKd/Ki=6.92, Kd=0.12uM
    15253 4poh:A (2.3) BS02 2VR ? GO:0003677 ... P19793 24801499 MOAD: Kd=10nM
    PDBbind: -logKd/Ki=8.00, Kd=10nM
    BindingDB: EC50=620nM, Kd=10.0nM
    15254 4poj:A (2.0) BS02 2VP ? GO:0003677 ... P19793 24801499 MOAD: Kd=8nM
    PDBbind: -logKd/Ki=8.10, Kd=8nM
    BindingDB: Kd=8.0nM, EC50=160nM
    15255 4pop:A (2.2) BS01 2VY ? GO:0005886 ... A2RI47 25676607 PDBbind: -logKd/Ki=8.13, Kd=7.44nM
    BindingDB: Kd=7.44nM
    15256 4pov:A (2.2) BS01 2VY ? GO:0005886 ... A2RI47 25676607 PDBbind: -logKd/Ki=8.28, Kd=5.21nM
    BindingDB: Kd=7.44nM
    15257 4pow:A (1.55) BS01 OP1 ? GO:0015276 ... P35120 25299655 MOAD: Kd=0.58uM
    PDBbind: -logKd/Ki=6.30, Kd=0.5uM
    15258 4pp0:A (1.57) BS01 OP1 ? GO:0015276 ... P35120 25299655 PDBbind: -logKd/Ki=4.40, Kd=39.9uM
    15259 4pp3:A (2.0) BS02 2VZ ? GO:0003677 ... P19793 24801499 MOAD: Kd=15nM
    PDBbind: -logKd/Ki=7.82, Kd=15nM
    BindingDB: EC50=100nM, Kd=15nM
    15260 4pp5:A (2.0) BS02 2W0 ? GO:0003677 ... P19793 24801499 MOAD: Kd=18nM
    PDBbind: -logKd/Ki=7.74, Kd=18nM
    BindingDB: Kd=2240nM, EC50=720nM
    15261 4pp7:A (3.4) BS01 2VX 2.7.11.1 GO:0004672 ... P15056 24675381 PDBbind: -logKd/Ki=7.96, IC50=11nM
    BindingDB: IC50=62nM
    15262 4pp9:A (2.58) BS01 2VT 2.7.10.2 GO:0004672 ... Q08881 24767842 PDBbind: -logKd/Ki=7.37, Ki=43nM
    15263 4ppa:A (2.67) BS01 2VU 2.7.10.2 GO:0004672 ... Q08881 24767842 PDBbind: -logKd/Ki=9.10, Ki=0.8nM
    BindingDB: IC50=210nM, Ki=1.1nM
    15264 4ppb:A (2.82) BS01 2VV 2.7.10.2 GO:0004672 ... Q08881 24767842 PDBbind: -logKd/Ki=10.00, Ki=0.1nM
    BindingDB: Ki=0.100000nM, IC50=25nM
    15265 4ppc:A (2.95) BS01 2VW 2.7.10.2 GO:0004672 ... Q08881 24767842 PDBbind: -logKd/Ki=9.03, Ki=0.93nM
    BindingDB: Ki=0.930000nM
    15266 4ppc:A (2.95) BS02 2VW 2.7.10.2 GO:0004672 ... Q08881 24767842 PDBbind: -logKd/Ki=9.03, Ki=0.93nM
    BindingDB: Ki=0.930000nM
    15267 4pqa:A (1.78) BS01 X8Z 3.5.1.18 GO:0006526 ... Q9JYL2 26186504 PDBbind: -logKd/Ki=5.55, Ki=2.8uM
    15268 4pqn:A (1.71) BS01 2W6 2.7.10.2 GO:0004672 ... Q08881 24918870 MOAD: Ki=0.7nM
    PDBbind: -logKd/Ki=9.15, Ki=0.7nM
    BindingDB: IC50=55nM, Ki=0.700000nM
    15269 4prg:A (2.9) BS01 072 ? GO:0003677 ... P37231 10339548 PDBbind: -logKd/Ki=7.15, Ki=70nM
    15270 4prj:A (2.8) BS01 2VU 2.7.11.1 GO:0004672 ... O14965 24918870 PDBbind: -logKd/Ki=7.14, Ki=72nM
    BindingDB: Ki=72nM
    15271 4ps3:A (2.9) BS01 2WH 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 24754609 PDBbind: -logKd/Ki=8.70, Ki=2nM
    BindingDB: Ki=2.0nM
    15272 4ps5:A (1.4) BS01 2TA ? N/A O60885 24568369 MOAD: ic50=0.29uM
    PDBbind: -logKd/Ki=6.54, IC50=0.29uM
    BindingDB: Kd=164nM, IC50=290nM
    15273 4ps7:A (2.69) BS01 2WJ 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 24754609 PDBbind: -logKd/Ki=7.41, Ki=39nM
    BindingDB: Ki=39nM
    15274 4ps8:A (2.99) BS01 2WK 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 24754609 PDBbind: -logKd/Ki=9.00, Ki=1nM
    BindingDB: Ki=1.000000nM
    15275 4psb:A (1.42) BS01 GA3 ? GO:0004864 ... A0A1S3THR8 25004979 MOAD: Kd=23uM
    PDBbind: -logKd/Ki=4.64, Kd=23uM
    15276 4psh:A (2.6) BS01 ARG ? GO:0015276 ... Q9WZ62 24832102 PDBbind: -logKd/Ki=8.89, Kd=1.3nM
    15277 4psq:B (2.4) BS01 2WL ? GO:0001654 ... P02753 24835984 MOAD: ic50=0.44uM
    PDBbind: -logKd/Ki=6.36, IC50=0.44uM
    BindingDB: IC50=440nM
    15278 4ptc:A (2.711) BS01 2WE 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 25845281 PDBbind: -logKd/Ki=8.96, IC50=1.1nM
    BindingDB: IC50=1.1nM
    15279 4pte:A (2.033) BS01 2WF 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 25845281 MOAD: ic50=74nM
    PDBbind: -logKd/Ki=7.13, IC50=74nM
    BindingDB: IC50=74nM
    15280 4ptg:A (2.361) BS01 2WG 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 25845281 MOAD: ic50=5.9nM
    PDBbind: -logKd/Ki=8.23, IC50=5.9nM
    BindingDB: IC50=5.9nM
    15281 4pu3:C (3.39) BS01 dna ? GO:0003677 ... Q8EIX4 25056321 PDBbind: Kd=5.5nM
    15282 4pu3:C (3.39) BS02 dna ? GO:0003677 ... Q8EIX4 25056321 PDBbind: Kd=5.5nM
    15283 4pu3:D (3.39) BS01 dna ? GO:0003677 ... Q8EIX4 25056321 PDBbind: Kd=5.5nM
    15284 4pu3:D (3.39) BS02 dna ? GO:0003677 ... Q8EIX4 25056321 PDBbind: Kd=5.5nM
    15285 4pu4:C (3.786) BS01 dna ? GO:0003677 ... Q8EIX4 25056321 PDBbind: Kd=5.5nM
    15286 4pu4:C (3.786) BS02 dna ? GO:0003677 ... Q8EIX4 25056321 PDBbind: Kd=5.5nM
    15287 4pu4:D (3.786) BS01 dna ? GO:0003677 ... Q8EIX4 25056321 PDBbind: Kd=5.5nM
    15288 4pu4:D (3.786) BS02 dna ? GO:0003677 ... Q8EIX4 25056321 PDBbind: Kd=5.5nM
    15289 4puj:A (1.42) BS02 CKR 2.4.2.29 GO:0002099 ... P28720 24955548 MOAD: Kd=35nM
    PDBbind: -logKd/Ki=7.46, Kd=35.0nM
    15290 4puk:A (1.49) BS02 2WU 2.4.2.29 GO:0002099 ... P28720 24955548 MOAD: Kd=52.4nM
    PDBbind: -logKd/Ki=7.28, Kd=52.4nM
    15291 4pul:A (1.654) BS02 2WU 2.4.2.29 GO:0002099 ... P28720 24955548 MOAD: Kd=146.1nM
    PDBbind: -logKd/Ki=6.84, Kd=146.1nM
    15292 4pum:A (1.93) BS02 2WU 2.4.2.29 GO:0002099 ... P28720 24955548 MOAD: Kd=188.1nM
    PDBbind: -logKd/Ki=6.73, Kd=188.1nM
    15293 4puz:A (2.085) BS01 CG9 2.7.10.2 GO:0004672 ... P43405 24779514 MOAD: ic50=7.7nM
    PDBbind: -logKd/Ki=8.11, IC50=7.7nM
    BindingDB: IC50=377nM, EC50=125nM
    15294 4pv0:A (2.0) BS01 CG4 2.7.10.2 GO:0004672 ... P43405 24779514 MOAD: Kd=4nM
    PDBbind: -logKd/Ki=9.07, IC50=0.85nM
    BindingDB: IC50=0.840000nM, EC50=175nM, Kd=4.0nM
    15295 4pv5:A (2.3) BS02 CBW 4.4.1.5 GO:0004462 ... Q9CPU0 26279158 PDBbind: -logKd/Ki=6.54, Ki=0.29uM
    15296 4pv5:B (2.3) BS02 CBW 4.4.1.5 GO:0004462 ... Q9CPU0 26279158 PDBbind: -logKd/Ki=6.54, Ki=0.29uM
    15297 4pv7:A (3.24) BS01 CJP 3.4.14.5 GO:0001618 ... P27487 N/A PDBbind: -logKd/Ki=6.63, IC50=232.8nM
    15298 4pvo:A (1.48) BS04 SVB 3.5.2.6 GO:0016787 ... Q9K2N0 25411887 PDBbind: -logKd/Ki=6.31, IC50=0.49uM
    15299 4pvt:A (2.0) BS03 S3C 3.5.2.6 GO:0016787 ... Q9K2N0 25411887 PDBbind: -logKd/Ki=6.52, IC50=0.3uM
    15300 4pvv:A (2.5) BS01 HO4 2.7.1.20 GO:0000287 ... P9WID5 25259627 MOAD: ic50=0.33uM
    PDBbind: -logKd/Ki=6.48, Kd=0.33uM
    15301 4pvx:F (2.18) BS03 YS1 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 29036218 PDBbind: -logKd/Ki=6.76, Kd=172nM
    BindingDB: IC50=12nM
    15302 4pvy:F (2.05) BS03 JD1 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 29036218 PDBbind: -logKd/Ki=6.71, Kd=197nM
    BindingDB: IC50=60nM
    15303 4px6:A (1.6) BS01 2X6 2.7.10.2 GO:0004672 ... P43405 24726806 MOAD: ic50=4nM
    PDBbind: -logKd/Ki=8.40, IC50=4nM
    BindingDB: IC50=307nM
    15304 4pxi:A (3.2) BS01 dna ? GO:0000976 ... O66122 25092919 PDBbind: Kd=200nM
    15305 4pxi:A (3.2) BS02 dna ? GO:0000976 ... O66122 25092919 PDBbind: Kd=200nM
    15306 4pxi:B (3.2) BS01 dna ? GO:0000976 ... O66122 25092919 PDBbind: Kd=200nM
    15307 4pxi:B (3.2) BS02 dna ? GO:0000976 ... O66122 25092919 PDBbind: Kd=200nM
    15308 4pxi:C (3.2) BS01 dna ? GO:0000976 ... O66122 25092919 PDBbind: Kd=200nM
    15309 4pxi:C (3.2) BS02 dna ? GO:0000976 ... O66122 25092919 PDBbind: Kd=200nM
    15310 4pxi:D (3.2) BS01 dna ? GO:0000976 ... O66122 25092919 PDBbind: Kd=200nM
    15311 4pxi:D (3.2) BS02 dna ? GO:0000976 ... O66122 25092919 PDBbind: Kd=200nM
    15312 4pxm:A (1.9) BS02 EST ? N/A P03372 26836308 PDBbind: -logKd/Ki=8.89, Kd=1.3nM
    BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    15313 4py1:A (2.16) BS01 2YK 2.7.10.2 GO:0004672 ... P29597 25113930 PDBbind: -logKd/Ki=7.19, IC50=64nM
    15314 4py2:A (2.15) BS01 43E 6.1.1.10 GO:0000166 ... Q2YQ76 27500735 MOAD: ic50=0.272uM
    PDBbind: -logKd/Ki=6.57, IC50=0.272uM
    15315 4py4:A (2.76) BS01 XL2 2.4.2.- GO:0003950 ... Q460N5 N/A PDBbind: -logKd/Ki=5.77, IC50=1.69uM
    15316 4py4:B (2.76) BS01 XL2 2.4.2.- GO:0003950 ... Q460N5 N/A PDBbind: -logKd/Ki=5.77, IC50=1.69uM
    15317 4pyn:A (1.2) BS01 SAH 2.1.1.6 GO:0000287 ... P22734 25084335 MOAD: ic50~30uM
    PDBbind: -logKd/Ki=4.52, IC50~30uM
    15318 4pyo:A (2.1) BS01 SAH 2.1.1.6 GO:0000287 ... P22734 25084335 MOAD: ic50~30uM
    PDBbind: -logKd/Ki=4.52, IC50~30uM
    15319 4pyq:A (1.39) BS01 2X1 2.1.1.6 GO:0000287 ... P22734 25084335 MOAD: ic50=4.4uM
    PDBbind: -logKd/Ki=5.36, IC50=4.4uM
    15320 4pyv:A (2.65) BS01 2XF 3.4.23.15 GO:0004190 ... P00797 25050166 PDBbind: -logKd/Ki=6.70, IC50=200nM
    BindingDB: IC50=200nM
    15321 4pyx:A (1.8) BS02 V90 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25358084 MOAD: Kd=730nM
    PDBbind: -logKd/Ki=6.14, Kd=730nM
    BindingDB: Kd=730nM
    15322 4pyy:A (1.75) BS02 V14 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25358084 MOAD: Kd=59nM
    PDBbind: -logKd/Ki=7.23, Kd=59nM
    BindingDB: Kd=60nM
    15323 4pzh:A (1.06) BS02 V13 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25358084 MOAD: Kd<10nM
    PDBbind: -logKd/Ki=8.00, Kd<10nM
    BindingDB: Kd=17nM
    15324 4pzv:A (1.704) BS01 J1D 2.5.1.15
    2.7.6.3    		 GO:0003848 ... Q5NGA7 24975935 MOAD: Kd=2uM
    PDBbind: -logKd/Ki=5.70, Kd=2.0uM
    15325 4pzw:A (1.8) BS01 2X4 3.4.23.46 GO:0004190 ... P56817 24780121 MOAD: ic50=0.11uM
    PDBbind: -logKd/Ki=6.96, IC50=0.11uM
    BindingDB: IC50=20nM
    15326 4pzx:A (1.8) BS01 2X5 3.4.23.46 GO:0004190 ... P56817 24780121 MOAD: ic50=1uM
    PDBbind: -logKd/Ki=6.00, IC50=1.0uM
    BindingDB: IC50=130nM
    15327 4q06:A (1.15) BS02 V90 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25358084 MOAD: Kd=22nM
    PDBbind: -logKd/Ki=7.66, Kd=22nM
    BindingDB: Kd=730nM
    15328 4q07:A (1.15) BS02 V14 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25358084 MOAD: Kd=7.3nM
    PDBbind: -logKd/Ki=8.14, Kd=7.3nM
    BindingDB: Kd=60nM
    15329 4q08:A (1.07) BS02 V90 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25358084 MOAD: Kd=500nM
    PDBbind: -logKd/Ki=6.30, Kd=500nM
    BindingDB: Kd=730nM
    15330 4q09:A (1.2) BS02 V14 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25358084 MOAD: Kd=6.7nM
    PDBbind: -logKd/Ki=8.17, Kd=6.7nM
    BindingDB: Kd=60nM
    15331 4q0a:C (1.9) BS02 4OA ? GO:0003677 ... Q9PTN2 24818857 MOAD: Kd=0.33uM
    PDBbind: -logKd/Ki=6.48, Kd=0.33uM
    15332 4q0a:C (1.9) BS03 4OA ? GO:0003677 ... Q9PTN2 24818857 MOAD: Kd=0.33uM
    PDBbind: -logKd/Ki=6.48, Kd=0.33uM
    15333 4q0k:A (1.34) BS01 GA3 ? GO:0004864 ... G7J032 25004979 MOAD: Kd=13.4uM
    PDBbind: -logKd/Ki=4.87, Kd=13.4uM
    15334 4q0l:A (2.0) BS02 V14 4.2.1.1 GO:0004089 ... O43570 25358084 MOAD: Kd=20nM
    PDBbind: -logKd/Ki=7.70, Kd=20nM
    BindingDB: Kd=5.3nM
    15335 4q15:A (2.35) BS02 HFG 6.1.1.15 GO:0000166 ... Q8I5R7 27798837 MOAD: ic50=275nM
    PDBbind: -logKd/Ki=7.96, IC50=11nM
    15336 4q18:A (2.0) BS01 2XJ 2.7.1.113
    2.7.1.74
    2.7.1.76    		 GO:0004136 ... P27707 25341194 MOAD: Ki=735nM
    PDBbind: -logKd/Ki=6.13, Ki=735nM
    BindingDB: IC50=754nM, Ki=735nM
    15337 4q18:A (2.0) BS02 2XJ 2.7.1.113
    2.7.1.74
    2.7.1.76    		 GO:0004136 ... P27707 25341194 MOAD: Ki=735nM
    PDBbind: -logKd/Ki=6.13, Ki=735nM
    BindingDB: IC50=754nM, Ki=735nM
    15338 4q19:A (2.09) BS01 2XL 2.7.1.113
    2.7.1.74
    2.7.1.76    		 GO:0004136 ... P27707 25341194 MOAD: Ki=8.9nM
    PDBbind: -logKd/Ki=8.05, Ki=8.9nM
    BindingDB: IC50=19nM, Ki=8.9nM
    15339 4q1a:A (1.9) BS01 2XZ 2.7.1.113
    2.7.1.74
    2.7.1.76    		 GO:0004136 ... P27707 25341194 MOAD: Ki=0.5nM
    PDBbind: -logKd/Ki=9.30, Ki=0.5nM
    BindingDB: IC50=1.2nM, Ki=0.500000nM
    15340 4q1b:A (2.15) BS01 2Y0 2.7.1.113
    2.7.1.74
    2.7.1.76    		 GO:0004136 ... P27707 25341194 MOAD: Ki=1.9nM
    PDBbind: -logKd/Ki=8.72, Ki=1.9nM
    BindingDB: IC50=12nM, Ki=1.9nM
    15341 4q1c:A (2.0) BS01 2XM 2.7.1.113
    2.7.1.74
    2.7.1.76    		 GO:0004136 ... P27707 25341194 MOAD: Ki=2nM
    PDBbind: -logKd/Ki=8.70, Ki=2.0nM
    BindingDB: IC50=0.900000nM, Ki=2.0nM
    15342 4q1d:A (2.0) BS01 2Y1 2.7.1.113
    2.7.1.74
    2.7.1.76    		 GO:0004136 ... P27707 25341194 MOAD: Ki=16.6nM
    PDBbind: -logKd/Ki=7.78, Ki=16.6nM
    BindingDB: IC50=10.0nM, Ki=17nM
    15343 4q1e:A (1.85) BS01 2Y8 2.7.1.113
    2.7.1.74
    2.7.1.76    		 GO:0004136 ... P27707 25341194 MOAD: Ki=6.8nM
    PDBbind: -logKd/Ki=8.17, Ki=6.8nM
    15344 4q1f:A (2.1) BS02 2XN 2.7.1.113
    2.7.1.74
    2.7.1.76    		 GO:0004136 ... P27707 25341194 MOAD: Ki=9.2nM
    PDBbind: -logKd/Ki=8.04, Ki=9.2nM
    BindingDB: Ki=9.2nM, IC50=28nM
    15345 4q1n:A (2.09) BS01 2Y9 3.4.23.15 GO:0004190 ... P00797 25050166 MOAD: ic50=0.2nM
    PDBbind: -logKd/Ki=9.70, IC50=0.2nM
    BindingDB: IC50=0.200000nM
    15346 4q1s:H (2.6) BS01 2YD 3.4.25.1 GO:0004298 ... P25043 25038530 PDBbind: -logKd/Ki=4.17, IC50=67.9uM
    15347 4q1s:a (2.6) BS01 2YD 3.4.25.1 GO:0000502 ... P30657 25038530 PDBbind: -logKd/Ki=4.17, IC50=67.9uM
    15348 4q1w:A (1.85) BS01 017 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 25091085 MOAD: Ki=2pM
    PDBbind: -logKd/Ki=11.70, Ki=2pM
    15349 4q1w:B (1.85) BS01 017 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 25091085 PDBbind: -logKd/Ki=11.70, Ki=2pM
    15350 4q1x:A (1.9) BS01 017 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 25091085 MOAD: Ki=7pM
    PDBbind: -logKd/Ki=11.15, Ki=7pM
    15351 4q1x:B (1.9) BS01 017 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 25091085 PDBbind: -logKd/Ki=11.15, Ki=7pM
    15352 4q1y:A (1.5) BS01 017 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 25091085 MOAD: Ki=45pM
    PDBbind: -logKd/Ki=10.35, Ki=45pM
    15353 4q1y:B (1.5) BS01 017 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 25091085 PDBbind: -logKd/Ki=10.35, Ki=45pM
    15354 4q2k:A (2.2) BS01 5BF 3.4.21.1 GO:0004252 ... P00766 24903745 PDBbind: -logKd/Ki=7.48, Ki=33nM
    15355 4q2k:A (2.2) BS02 5BF 3.4.21.1 GO:0004252 ... P00766 24903745 PDBbind: -logKd/Ki=7.48, Ki=33nM
    15356 4q3q:A (2.001) BS03 ABH 3.5.3.1 GO:0000050 ... Q6WVP6 25007099 MOAD: Kd=1.3uM
    PDBbind: -logKd/Ki=5.89, Kd=1.3uM
    15357 4q3r:A (2.169) BS03 XA2 3.5.3.1 GO:0000050 ... Q6WVP6 25007099 MOAD: Kd=0.54uM
    PDBbind: -logKd/Ki=6.27, Kd=0.54uM
    15358 4q3r:B (2.169) BS03 XA2 3.5.3.1 GO:0000050 ... Q6WVP6 25007099 MOAD: Kd=0.54uM
    PDBbind: -logKd/Ki=6.27, Kd=0.54uM
    15359 4q3s:A (2.11) BS03 X7A 3.5.3.1 GO:0000050 ... Q6WVP6 25007099 MOAD: Kd=0.26uM
    PDBbind: -logKd/Ki=6.59, Kd=0.26uM
    15360 4q3s:C (2.11) BS03 X7A 3.5.3.1 GO:0000050 ... Q6WVP6 25007099 MOAD: Kd=0.26uM
    PDBbind: -logKd/Ki=6.59, Kd=0.26uM
    15361 4q3t:A (2.142) BS03 HAR 3.5.3.1 GO:0000050 ... Q6WVP6 25007099 MOAD: Kd=0.33uM
    PDBbind: -logKd/Ki=6.48, Kd=0.33uM
    15362 4q3u:A (2.5) BS03 NNH 3.5.3.1 GO:0000050 ... Q6WVP6 25007099 MOAD: Kd=0.36uM
    PDBbind: -logKd/Ki=6.44, Kd=0.36uM
    15363 4q46:A (1.8) BS01 GDP ? N/A A0A0J9X1Z6 25691568 PDBbind: -logKd/Ki=3.77, Kd=169uM
    15364 4q46:A (1.8) BS02 GDP ? N/A A0A0J9X1Z6 25691568 PDBbind: -logKd/Ki=3.77, Kd=169uM
    15365 4q4e:A (1.9) BS02 BB2 3.4.11.2 GO:0004177 ... P04825 25644575 MOAD: ic50=0.19uM
    PDBbind: -logKd/Ki=6.72, IC50=0.19uM
    15366 4q4o:A (1.35) BS02 2YM 2.4.2.29 GO:0002099 ... P28720 24960372 MOAD: Kd=34.3nM
    PDBbind: -logKd/Ki=7.46, Kd=34.3nM
    15367 4q4p:A (1.539) BS02 2YO 2.4.2.29 GO:0002099 ... P28720 24960372 MOAD: Kd=407.4nM
    PDBbind: -logKd/Ki=6.39, Kd=407.4nM
    15368 4q4q:A (1.41) BS02 SAQ 2.4.2.29 GO:0002099 ... P28720 24960372 MOAD: Kd=1638.9nM
    PDBbind: -logKd/Ki=5.79, Kd=1638.9nM
    15369 4q4r:A (1.448) BS02 SQO 2.4.2.29 GO:0002099 ... P28720 24960372 MOAD: Kd=369.2nM
    PDBbind: -logKd/Ki=6.43, Kd=369.2nM
    15370 4q4s:A (1.249) BS02 S98 2.4.2.29 GO:0002099 ... P28720 24960372 MOAD: Kd=111.6nM
    PDBbind: -logKd/Ki=6.95, Kd=111.6nM
    BindingDB: Ki=3.5nM
    15371 4q6d:A (1.12) BS02 WW3 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25353386 MOAD: Kd=0.0435uM
    PDBbind: -logKd/Ki=7.36, Kd=43.5nM
    15372 4q6e:A (1.12) BS02 KR5 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25353386 MOAD: Kd=0.667uM
    PDBbind: -logKd/Ki=6.18, Kd=0.667uM
    15373 4q6r:A (2.4) BS01 30J 4.1.2.27 GO:0016830 ... O95470 24809814 MOAD: ic50=0.21uM
    PDBbind: -logKd/Ki=6.68, IC50=0.21uM
    BindingDB: IC50=210nM
    15374 4q6r:A (2.4) BS02 30J 4.1.2.27 GO:0016830 ... O95470 24809814 MOAD: ic50=0.21uM
    PDBbind: -logKd/Ki=6.68, IC50=0.21uM
    BindingDB: IC50=210nM
    15375 4q6r:B (2.4) BS01 30J 4.1.2.27 GO:0016830 ... O95470 24809814 MOAD: ic50=0.21uM
    PDBbind: -logKd/Ki=6.68, IC50=0.21uM
    BindingDB: IC50=210nM
    15376 4q6r:B (2.4) BS03 30J 4.1.2.27 GO:0016830 ... O95470 24809814 MOAD: ic50=0.21uM
    PDBbind: -logKd/Ki=6.68, IC50=0.21uM
    BindingDB: IC50=210nM
    15377 4q7p:A (1.65) BS02 3MH 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25116076 MOAD: Ki=48uM
    PDBbind: -logKd/Ki=4.32, Ki=48uM
    BindingDB: Ki=48000nM
    15378 4q7s:A (1.8) BS02 2YU 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25116076 MOAD: Ki=38uM
    PDBbind: -logKd/Ki=4.42, Ki=38uM
    BindingDB: Ki=38000nM
    15379 4q7v:A (1.6) BS02 5MH 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25116076 MOAD: Ki=260uM
    PDBbind: -logKd/Ki=3.59, Ki=260uM
    BindingDB: Ki=260000nM
    15380 4q7w:A (1.45) BS02 6MH 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25116076 MOAD: Ki=2300uM
    PDBbind: -logKd/Ki=2.64, Ki=2300uM
    BindingDB: Ki=2300000nM
    15381 4q81:A (1.55) BS02 7MH 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25116076 MOAD: Ki=950uM
    PDBbind: -logKd/Ki=3.02, Ki=950uM
    BindingDB: Ki=950000nM
    15382 4q83:A (1.55) BS02 3FH 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25116076 MOAD: Ki=64uM
    PDBbind: -logKd/Ki=4.19, Ki=64uM
    BindingDB: Ki=64000nM
    15383 4q87:A (1.55) BS02 4FH 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25116076 MOAD: Ki=14uM
    PDBbind: -logKd/Ki=4.85, Ki=14uM
    BindingDB: Ki=14000nM
    15384 4q8x:A (1.55) BS02 7FH 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25116076 MOAD: Ki=270uM
    PDBbind: -logKd/Ki=3.57, Ki=270uM
    BindingDB: Ki=270000nM
    15385 4q8y:A (1.45) BS02 HQT 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25116076 MOAD: Ki=2300uM
    PDBbind: -logKd/Ki=2.64, Ki=2300uM
    BindingDB: Ki=2300000nM
    15386 4q90:A (1.54) BS02 4H2 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25116076 MOAD: Ki=7mM
    PDBbind: -logKd/Ki=2.15, Ki=7.0mM
    15387 4q93:A (2.1) BS01 STL 6.1.1.1 GO:0000166 ... P54577 25533949 PDBbind: -logKd/Ki=4.65, Ki=22.3uM
    15388 4q99:A (1.5) BS02 HT4 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25116076 MOAD: Ki=0.52uM
    PDBbind: -logKd/Ki=6.28, Ki=0.52uM
    15389 4q9m:A (2.06) BS01 2ZW 2.5.1.- GO:0000287 ... Q8DRB3 25287857 MOAD: Kd=66nM
    PDBbind: -logKd/Ki=7.18, Kd=66nM
    15390 4q9o:A (2.2) BS01 2ZW 2.5.1.- GO:0000287 ... Q8DRB3 25287857 MOAD: Kd=1.7uM
    PDBbind: -logKd/Ki=5.77, Kd=1.7uM
    15391 4q9s:A (2.07) BS01 30G 2.7.10.2 GO:0004672 ... Q05397 25000588 MOAD: ic50=156uM
    PDBbind: -logKd/Ki=3.81, IC50=156uM
    BindingDB: IC50=156000nM
    15392 4q9y:A (1.55) BS02 M3T 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25116076 MOAD: Ki=2.1uM
    PDBbind: -logKd/Ki=5.68, Ki=2.1uM
    15393 4q9z:A (2.6) BS01 PZW 2.7.11.13 GO:0004672 ... Q04759 25000588 PDBbind: -logKd/Ki=7.26, IC50=55nM
    BindingDB: IC50=55nM
    15394 4qaa:A (2.7) BS01 KK1 ? GO:0004888 ... P58154 25006260 PDBbind: -logKd/Ki=6.44, Kd=0.36uM
    15395 4qaa:A (2.7) BS02 KK1 ? GO:0004888 ... P58154 25006260 PDBbind: -logKd/Ki=6.44, Kd=0.36uM
    15396 4qaa:B (2.7) BS01 KK1 ? GO:0004888 ... P58154 25006260 PDBbind: -logKd/Ki=6.44, Kd=0.36uM
    15397 4qab:A (2.984) BS01 KK2 ? GO:0004888 ... P58154 25006260 PDBbind: -logKd/Ki=9.70, Kd=0.2nM
    15398 4qab:A (2.984) BS02 KK2 ? GO:0004888 ... P58154 25006260 PDBbind: -logKd/Ki=9.70, Kd=0.2nM
    15399 4qab:B (2.984) BS01 KK2 ? GO:0004888 ... P58154 25006260 PDBbind: -logKd/Ki=9.70, Kd=0.2nM
    15400 4qab:B (2.984) BS02 KK2 ? GO:0004888 ... P58154 25006260 PDBbind: -logKd/Ki=9.70, Kd=0.2nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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