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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    15001 4oe1:B (2.8) BS02 rna ? GO:0003723 ... B8Y6I0 25231995 PDBbind: Kd=1.25nM
    15002 4oee:A (1.5) BS01 IDY ? GO:0008083 ... P09038 24959968 PDBbind: -logKd/Ki=5.76, Kd=1.73uM
    15003 4oee:A (1.5) BS02 GNX ? GO:0008083 ... P09038 24959968 PDBbind: -logKd/Ki=5.76, Kd=1.73uM
    15004 4oef:A (1.8) BS01 IDY ? GO:0008083 ... P09038 24959968 PDBbind: -logKd/Ki=4.76, Kd=17.5uM
    15005 4oef:A (1.8) BS02 SGN ? GO:0008083 ... P09038 24959968 PDBbind: -logKd/Ki=4.76, Kd=17.5uM
    15006 4oeg:A (1.6) BS01 IDY ? GO:0008083 ... P09038 24959968 PDBbind: -logKd/Ki=5.05, Kd=9.01uM
    15007 4oeg:A (1.6) BS02 SUS ? GO:0008083 ... P09038 24959968 PDBbind: -logKd/Ki=5.05, Kd=9.01uM
    15008 4oel:A (1.4) BS01 SER 3.4.14.1 GO:0006508 ... P53634 22928782 PDBbind: -logKd/Ki=7.00, Ki=0.1uM
    15009 4oel:A (1.4) BS02 TYR 3.4.14.1 GO:0006508 ... P53634 22928782 PDBbind: -logKd/Ki=7.00, Ki=0.1uM
    15010 4oem:A (1.52) BS02 LYS 3.4.14.1 GO:0006508 ... P53634 22928782 PDBbind: -logKd/Ki=5.30, Ki=5.0uM
    15011 4oeu:A (2.2) BS02 HIS ? GO:0015833 ... Q0P844 25199691 PDBbind: -logKd/Ki=7.66, Kd=22nM
    15012 4oew:A (2.44) BS02 5IO 3.1.4.35 GO:0004114 ... O76074 24702184 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=6.82, Kd=152nM
    BindingDB: Kd=150nM
    15013 4oex:A (2.14) BS01 5EO 3.1.4.35 GO:0004114 ... O76074 24702184 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=5.84, Kd=1.45uM
    BindingDB: Kd=1500nM
    15014 4ofl:A (2.7) BS01 HIS ? GO:0030288 ... A0A5P8YI66 25199691 PDBbind: -logKd/Ki=7.66, Kd=22nM
    15015 4og3:A (2.01) BS01 2S6 ? GO:0005634 ... O00255 24472025 MOAD: Kd=285nM
    PDBbind: -logKd/Ki=6.55, Kd=285nM
    BindingDB: IC50=390nM, Kd=285nM
    15016 4og4:A (1.45) BS01 2VK ? GO:0005634 ... O00255 24472025 MOAD: Kd=952nM
    PDBbind: -logKd/Ki=6.02, Kd=952nM
    BindingDB: IC50=529nM, Kd=952nM
    15017 4og5:A (1.63) BS01 2S7 ? GO:0005634 ... O00255 24472025 MOAD: ic50=302nM
    PDBbind: -logKd/Ki=6.52, IC50=302nM
    BindingDB: IC50=195nM
    15018 4og6:A (1.49) BS01 2S9 ? GO:0005634 ... O00255 24472025 MOAD: ic50=197nM
    PDBbind: -logKd/Ki=6.71, IC50=197nM
    BindingDB: IC50=197nM
    15019 4og7:A (2.08) BS01 2SE ? GO:0005634 ... O00255 24472025 MOAD: ic50=114nM
    PDBbind: -logKd/Ki=6.94, IC50=114nM
    BindingDB: IC50=114nM
    15020 4og8:A (1.53) BS02 2SF ? GO:0005634 ... O00255 24472025 MOAD: ic50=56nM
    PDBbind: -logKd/Ki=7.25, IC50=56nM
    BindingDB: Kd=110000nM, IC50=67nM, Ki=58nM
    15021 4ogi:A (1.73) BS01 R78 ? N/A O60885 24584101 MOAD: Kd=37nM
    PDBbind: -logKd/Ki=7.43, Kd=37nM
    BindingDB: IC50=25nM, Kd=37nM, Ki=56nM
    15022 4ogj:A (1.65) BS01 2TA ? N/A O60885 24584101 MOAD: Kd=164nM
    PDBbind: -logKd/Ki=6.79, Kd=164nM
    BindingDB: Kd=164nM, IC50=290nM
    15023 4ogj:A (1.65) BS02 2TA ? N/A O60885 24584101 MOAD: Kd=164nM
    PDBbind: -logKd/Ki=6.79, Kd=164nM
    BindingDB: Kd=164nM, IC50=290nM
    15024 4ogn:A (1.377) BS01 2U5 2.3.2.27 GO:0005634 ... Q00987 24601644 MOAD: ic50=0.1nM
    PDBbind: -logKd/Ki=10.00, IC50=0.1nM
    BindingDB: IC50=0.100000nM
    15025 4ogt:A (1.5361) BS01 2U6 2.3.2.27 GO:0005634 ... Q00987 24601644 MOAD: ic50=0.1nM
    PDBbind: -logKd/Ki=10.00, IC50=0.1nM
    BindingDB: IC50=0.100000nM
    15026 4ogv:A (2.197) BS01 2U7 2.3.2.27 GO:0005634 ... Q00987 24601644 MOAD: ic50=9nM
    PDBbind: -logKd/Ki=8.05, IC50=9.0nM
    BindingDB: IC50=9.0nM
    15027 4ohk:A (2.8) BS01 2TE ? GO:0004857 ... Q14397 24611879 PDBbind: -logKd/Ki=8.30, IC50=5nM
    15028 4ohm:A (2.4) BS01 2TF ? GO:0004857 ... Q14397 24611879 PDBbind: -logKd/Ki=7.55, IC50=28nM
    BindingDB: IC50=28nM
    15029 4oho:A (2.58) BS01 2TG ? GO:0004857 ... Q14397 24611879 PDBbind: -logKd/Ki=7.77, IC50=17nM
    BindingDB: IC50=45nM
    15030 4ohp:A (2.4) BS01 2TJ ? GO:0004857 ... Q14397 24611879 PDBbind: -logKd/Ki=7.46, IC50=35nM
    BindingDB: IC50=35nM
    15031 4oiv:A (1.7) BS01 XX9 ? GO:0003677 ... Q96RI1 26100621 MOAD: Kd=8.29uM
    PDBbind: -logKd/Ki=5.08, Kd=8.29uM
    15032 4oiv:B (1.7) BS01 XX9 ? GO:0003677 ... Q96RI1 26100621 MOAD: Kd=8.29uM
    PDBbind: -logKd/Ki=5.08, Kd=8.29uM
    15033 4ojq:A (2.25) BS01 2SX 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0004386 ... K4KA16 24467709 MOAD: ic50=500uM
    PDBbind: -logKd/Ki=3.30, IC50=500uM
    15034 4ojr:A (1.82) BS01 2SQ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 24904063 PDBbind: -logKd/Ki=7.42, IC50~38nM
    15035 4ok3:A (2.3) BS01 2SY 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0004386 ... K4KA16 24467709 MOAD: ic50=71uM
    PDBbind: -logKd/Ki=4.15, IC50=71uM
    15036 4ok5:A (2.15) BS02 2T2 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0004386 ... K4KA16 24467709 MOAD: ic50=31uM
    PDBbind: -logKd/Ki=4.51, IC50=31uM
    15037 4ok6:A (2.4) BS02 2T7 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0004386 ... K4KA16 24467709 MOAD: ic50=14uM
    PDBbind: -logKd/Ki=4.85, IC50=14uM
    15038 4okg:A (2.06) BS02 2SZ 3.5.1.108 GO:0006796 ... P47205 N/A PDBbind: -logKd/Ki=9.32, IC50=0.48nM
    15039 4okp:B (1.37) BS01 2V0 3.5.2.6 GO:0008800 ... P00811 24791931 PDBbind: -logKd/Ki=2.70, Ki<2mM
    15040 4oks:A (2.25) BS01 2T9 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0004386 ... K4KA16 24467709 MOAD: Kd=33uM
    PDBbind: -logKd/Ki=4.48, Kd=33uM
    15041 4olc:A (2.6) BS01 DCD 2.7.2.2 GO:0005829 ... A8BB85 24558036 PDBbind: -logKd/Ki=6.19, IC50=0.64uM
    15042 4old:A (1.48) BS01 2UZ 3.5.2.6 GO:0008800 ... P00811 24791931 PDBbind: -logKd/Ki=2.70, Ki>2mM
    15043 4olh:A (2.4) BS01 2TO ? GO:0004857 ... Q14397 25001129 PDBbind: -logKd/Ki=8.30, IC50=5nM
    15044 4oma:A (1.6) BS01 LCS 4.4.1.11 GO:0005737 ... Q84AR1 25398880 PDBbind: -logKd/Ki=4.17, Ki=68uM
    15045 4omj:A (1.6) BS01 2TX ? N/A O76054 25987292 MOAD: Kd=5.44uM
    PDBbind: -logKd/Ki=5.26, Kd=5.44uM
    15046 4omk:A (1.75) BS01 SQL ? N/A O76054 25987292 MOAD: Kd=40.1uM
    PDBbind: -logKd/Ki=4.40, Kd=40.10uM
    15047 4omy:A (3.062) BS01 dna ? GO:0003700 ... Q83TD2 24733893 PDBbind: Kd=0.43uM
    15048 4omy:A (3.062) BS02 dna ? GO:0003700 ... Q83TD2 24733893 PDBbind: Kd=0.43uM
    15049 4omy:B (3.062) BS01 dna ? GO:0003700 ... Q83TD2 24733893 PDBbind: Kd=0.43uM
    15050 4omy:B (3.062) BS02 dna ? GO:0003700 ... Q83TD2 24733893 PDBbind: Kd=0.43uM
    15051 4omy:C (3.062) BS01 dna ? GO:0003700 ... Q83TD2 24733893 PDBbind: Kd=0.43uM
    15052 4omy:C (3.062) BS02 dna ? GO:0003700 ... Q83TD2 24733893 PDBbind: Kd=0.43uM
    15053 4omy:D (3.062) BS01 dna ? GO:0003700 ... Q83TD2 24733893 PDBbind: Kd=0.43uM
    15054 4omy:D (3.062) BS02 dna ? GO:0003700 ... Q83TD2 24733893 PDBbind: Kd=0.43uM
    15055 4on0:A (3.0) BS01 dna ? GO:0003700 ... Q83TD2 24733893 PDBbind: Kd=0.36uM
    15056 4on0:A (3.0) BS02 dna ? GO:0003700 ... Q83TD2 24733893 PDBbind: Kd=0.36uM
    15057 4on0:B (3.0) BS01 dna ? GO:0003700 ... Q83TD2 24733893 PDBbind: Kd=0.36uM
    15058 4on0:B (3.0) BS02 dna ? GO:0003700 ... Q83TD2 24733893 PDBbind: Kd=0.36uM
    15059 4on0:C (3.0) BS01 dna ? GO:0003700 ... Q83TD2 24733893 PDBbind: Kd=0.36uM
    15060 4on0:C (3.0) BS02 dna ? GO:0003700 ... Q83TD2 24733893 PDBbind: Kd=0.36uM
    15061 4on0:D (3.0) BS01 dna ? GO:0003700 ... Q83TD2 24733893 PDBbind: Kd=0.36uM
    15062 4on0:D (3.0) BS02 dna ? GO:0003700 ... Q83TD2 24733893 PDBbind: Kd=0.36uM
    15063 4ona:A (2.4) BS01 UW1 2.7.11.17 GO:0004672 ... Q9BJF5 24494061 MOAD: ic50=0.002uM
    PDBbind: -logKd/Ki=8.15, IC50=7nM
    BindingDB: IC50=2.00nM
    15064 4ono:A (2.705) BS01 PMK ? GO:0000139 ... P29016
    P29017
    P61769    		 25298532 PDBbind: -logKd/Ki=5.19, Kd=6.5uM
    15065 4oo9:A (2.6) BS01 2U8 3.2.1.17 GO:0003796 ... P00720
    P41594    		 25042998 PDBbind: -logKd/Ki=9.07, Kd=0.86nM
    15066 4ool:A (2.3) BS01 2U2 N/A GO:0005886 ... N/A 24694215 PDBbind: -logKd/Ki=6.85, IC50=0.14uM
    15067 4oon:A (3.2) BS01 2U4 2.4.99.28
    3.4.16.4    		 GO:0004180 ... Q07806 24694215 PDBbind: -logKd/Ki=7.52, IC50=0.030uM
    15068 4oow:A (2.57) BS01 CAQ 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 25053847 PDBbind: -logKd/Ki=5.37, IC50=4.3uM
    15069 4op1:A (2.39) BS01 2UW ? GO:0004857 ... Q14397 25914941 PDBbind: -logKd/Ki=6.89, IC50=0.129uM
    15070 4op2:A (2.24) BS01 2UX ? GO:0004857 ... Q14397 25914941 PDBbind: -logKd/Ki=5.93, IC50=1.176uM
    15071 4op3:A (2.82) BS01 2UY ? GO:0004857 ... Q14397 25914941 PDBbind: -logKd/Ki=8.15, IC50=7nM
    15072 4oq3:A (2.3) BS01 2V8 2.3.2.27 GO:0005634 ... Q00987 24704029 MOAD: ic50=0.008uM
    PDBbind: -logKd/Ki=8.10, IC50=8nM
    BindingDB: IC50=8.0nM
    15073 4oq3:A (2.3) BS02 2V8 2.3.2.27 GO:0005634 ... Q00987 24704029 MOAD: ic50=0.008uM
    PDBbind: -logKd/Ki=8.10, IC50=8nM
    BindingDB: IC50=8.0nM
    15074 4oq5:A (2.86) BS01 2UU ? GO:0042981 ... Q07820 24582986 PDBbind: -logKd/Ki=6.30, IC50=0.5uM
    BindingDB: IC50=500nM
    15075 4oq5:A (2.86) BS02 2UU ? GO:0042981 ... Q07820 24582986 PDBbind: -logKd/Ki=6.30, IC50=0.5uM
    BindingDB: IC50=500nM
    15076 4oq6:A (1.81) BS01 2UV ? GO:0042981 ... Q07820 24582986 MOAD: ic50=3.3uM
    PDBbind: -logKd/Ki=5.48, IC50=3.3uM
    BindingDB: IC50=3300nM
    15077 4or0:A (2.58) BS01 NPS ? GO:0003677 ... P02769 24753230 PDBbind: -logKd/Ki=7.46, Kd=35nM
    15078 4or0:A (2.58) BS02 NPS ? GO:0003677 ... P02769 24753230 PDBbind: -logKd/Ki=7.46, Kd=35nM
    15079 4or0:A (2.58) BS03 NPS ? GO:0003677 ... P02769 24753230 PDBbind: -logKd/Ki=7.46, Kd=35nM
    15080 4or4:A (2.21) BS01 M7G ? N/A A0A0J9X1Y8 25691568 PDBbind: -logKd/Ki=4.57, Kd=26.8uM
    15081 4or6:A (2.293) BS01 GDP ? N/A A0A0J9X1Y8 25691568 PDBbind: -logKd/Ki=5.31, Kd=4.9uM
    15082 4osf:A (1.62) BS01 4MT 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 25743213 PDBbind: -logKd/Ki=5.44, IC50=3.6uM
    15083 4osf:A (1.62) BS02 4MT 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 25743213 PDBbind: -logKd/Ki=5.44, IC50=3.6uM
    15084 4osf:C (1.62) BS01 4MT 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 25743213 PDBbind: -logKd/Ki=5.44, IC50=3.6uM
    15085 4osf:C (1.62) BS02 4MT 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 25743213 PDBbind: -logKd/Ki=5.44, IC50=3.6uM
    15086 4ot6:A (2.05) BS01 2V1 2.7.10.2 GO:0004672 ... Q06187 24712864 PDBbind: -logKd/Ki=5.92, IC50=1200nM
    15087 4otf:A (1.95) BS01 2VL 2.7.10.2 GO:0004672 ... Q06187 25701252 MOAD: ic50=0.006uM
    PDBbind: -logKd/Ki=8.22, IC50=0.006uM
    BindingDB: IC50=6.0nM, EC50=380nM
    15088 4otg:A (2.6) BS01 2V9 2.7.11.13 GO:0004672 ... Q16512 25111382 PDBbind: -logKd/Ki=7.59, IC50=26nM
    15089 4oth:A (1.8) BS01 DRN 2.7.11.13 GO:0004672 ... Q16512 25111382 MOAD: ic50=9nM
    PDBbind: -logKd/Ki=8.05, IC50=9nM
    15090 4oti:A (1.93) BS01 MI1 2.7.11.13 GO:0004672 ... Q16512 25111382 MOAD: ic50=43nM
    PDBbind: -logKd/Ki=7.37, IC50=43nM
    BindingDB: Kd=200nM
    15091 4oty:A (2.354) BS01 LUR 1.14.99.1 GO:0001516 ... Q05769 24060487 MOAD: ic50=0.04uM
    PDBbind: -logKd/Ki=7.40, IC50=0.04uM
    BindingDB: IC50=40nM
    15092 4oue:A (2.35) BS01 IPT 3.2.1.111 GO:0004560 ... Q8A5P6 24527659 PDBbind: -logKd/Ki=3.30, Ki>500uM
    15093 4ovf:A (2.05) BS02 2VG N/A GO:0003677 ... N/A 25970224 PDBbind: -logKd/Ki=4.13, Ki=74uM
    15094 4ovg:A (1.9) BS01 2VF N/A GO:0003677 ... N/A 25970224 PDBbind: -logKd/Ki=3.69, Ki=204uM
    15095 4ovh:A (2.25) BS01 2VE N/A GO:0003677 ... N/A 25970224 PDBbind: -logKd/Ki=4.85, Kd=14uM
    15096 4ovz:A (2.5) BS01 P85 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69    		 GO:0006508 ... P0C6U8 24568342 MOAD: ic50=0.49uM
    PDBbind: -logKd/Ki=6.31, IC50=0.49uM
    BindingDB: IC50=490nM
    15097 4ovz:A (2.5) BS02 P85 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69    		 GO:0006508 ... P0C6U8 24568342 MOAD: ic50=0.49uM
    PDBbind: -logKd/Ki=6.31, IC50=0.49uM
    BindingDB: IC50=490nM
    15098 4ow0:A (2.1) BS01 S88 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69    		 GO:0006508 ... P0C6U8 24568342 MOAD: ic50=0.15uM
    PDBbind: -logKd/Ki=6.82, IC50=0.15uM
    BindingDB: IC50=150nM
    15099 4ow0:A (2.1) BS02 S88 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69    		 GO:0006508 ... P0C6U8 24568342 MOAD: ic50=0.15uM
    PDBbind: -logKd/Ki=6.82, IC50=0.15uM
    BindingDB: IC50=150nM
    15100 4owm:A (1.99) BS04 3F0 2.4.2.18 GO:0000162 ... P9WFX5 24712732 PDBbind: -logKd/Ki=2.96, Ki=1090uM
    15101 4own:A (2.11) BS04 5RG 2.4.2.18 GO:0000162 ... P9WFX5 24712732 PDBbind: -logKd/Ki=4.22, Ki=60uM
    15102 4own:A (2.11) BS05 5RG 2.4.2.18 GO:0000162 ... P9WFX5 24712732 PDBbind: -logKd/Ki=4.22, Ki=60uM
    15103 4owo:A (1.99) BS04 6F0 2.4.2.18 GO:0000162 ... P9WFX5 24712732 PDBbind: -logKd/Ki=4.47, Ki=34uM
    15104 4owo:A (1.99) BS05 6F0 2.4.2.18 GO:0000162 ... P9WFX5 24712732 PDBbind: -logKd/Ki=4.47, Ki=34uM
    15105 4owv:A (1.9) BS01 BE2 2.4.2.18 GO:0000162 ... P9WFX5 24712732 MOAD: Ki=45uM
    PDBbind: -logKd/Ki=4.35, Ki=45uM
    15106 4owx:B (2.3) BS01 dna ? GO:0000724 ... Q9BQ15 24630995 PDBbind: Kd=8.2uM
    15107 4oya:A (2.03) BS01 1VE 4.6.1.1 GO:0009190 ... Q96PN6 24616449 MOAD: ic50=0.36uM
    PDBbind: -logKd/Ki=6.44, IC50=0.36uM
    15108 4oyb:A (1.7) BS01 1VJ 4.6.1.1 GO:0009190 ... Q96PN6 24616449 MOAD: ic50=1.6uM
    PDBbind: -logKd/Ki=5.80, IC50=1.6uM
    15109 4oyi:A (1.7) BS01 1VK 4.6.1.1 GO:0009190 ... Q96PN6 24616449 MOAD: ic50=19uM
    PDBbind: -logKd/Ki=4.72, IC50=19uM
    15110 4oym:A (1.7) BS01 1ZC 4.6.1.1 GO:0009190 ... Q96PN6 24616449 MOAD: ic50=11uM
    PDBbind: -logKd/Ki=4.96, IC50=11uM
    15111 4oyo:A (1.75) BS01 1WC 4.6.1.1 GO:0009190 ... Q96PN6 24616449 PDBbind: -logKd/Ki=3.52, IC50>300uM
    15112 4oyo:A (1.75) BS02 1WC 4.6.1.1 GO:0009190 ... Q96PN6 24616449 PDBbind: -logKd/Ki=3.52, IC50>300uM
    15113 4oyo:A (1.75) BS03 1WC 4.6.1.1 GO:0009190 ... Q96PN6 24616449 PDBbind: -logKd/Ki=3.52, IC50>300uM
    15114 4oyp:A (2.28) BS01 BZ2 4.6.1.1 GO:0009190 ... Q96PN6 24616449 PDBbind: -logKd/Ki=3.00, IC50>1000uM
    15115 4oys:A (2.9) BS01 1TT 2.7.1.137 GO:0016301 ... Q8NEB9 25326666 PDBbind: -logKd/Ki=8.82, Kd=1.52nM
    15116 4oyt:A (2.4) BS02 FON 2.1.2.1 GO:0004372 ... A5K8L9 25478836 PDBbind: -logKd/Ki=2.81, Ki=1.55mM
    15117 4oyt:A (2.4) BS04 FON 2.1.2.1 GO:0004372 ... A5K8L9 25478836 PDBbind: -logKd/Ki=2.81, Ki=1.55mM
    15118 4oyt:B (2.4) BS02 FON 2.1.2.1 GO:0004372 ... A5K8L9 25478836 PDBbind: -logKd/Ki=2.81, Ki=1.55mM
    15119 4oyt:B (2.4) BS04 FON 2.1.2.1 GO:0004372 ... A5K8L9 25478836 PDBbind: -logKd/Ki=2.81, Ki=1.55mM
    15120 4oz1:A (1.74) BS01 LYS ? GO:0003676 ... Q14498 24795046 PDBbind: -logKd/Ki=5.62, Kd=2400nM
    15121 4oz2:A (2.1) BS01 1Z6 4.6.1.1 GO:0009190 ... Q96PN6 24616449 PDBbind: -logKd/Ki=3.00, IC50>1000uM
    15122 4oz3:A (1.7) BS01 1Z8 4.6.1.1 GO:0009190 ... Q96PN6 24616449 MOAD: ic50=28uM
    PDBbind: -logKd/Ki=4.55, IC50=28uM
    15123 4ozj:A (1.45) BS01 ADP ? GO:0005524 ... B8ZYW1 24946894 PDBbind: -logKd/Ki=5.40, Kd=4uM
    15124 4ozl:A (1.4942) BS01 AMP ? GO:0005524 ... B8ZYW1 24946894 PDBbind: -logKd/Ki=4.97, Kd=10.6uM
    15125 4ozn:A (2.6) BS01 ATP ? GO:0005524 ... B8ZYW1 24946894 PDBbind: -logKd/Ki=5.40, Kd=4uM
    15126 4ozn:A (2.6) BS02 ATP ? GO:0005524 ... B8ZYW1 24946894 PDBbind: -logKd/Ki=5.40, Kd=4uM
    15127 4ozn:B (2.6) BS01 ATP ? GO:0005524 ... B8ZYW1 24946894 PDBbind: -logKd/Ki=5.40, Kd=4uM
    15128 4ozn:B (2.6) BS02 ATP ? GO:0005524 ... B8ZYW1 24946894 PDBbind: -logKd/Ki=5.40, Kd=4uM
    15129 4ozo:A (2.6) BS01 OTN 3.2.1.111 GO:0004560 ... Q8A5P6 24527659 PDBbind: -logKd/Ki=3.83, Ki=147uM
    15130 4p00:A (3.2) BS11 C2E 2.4.1.12 GO:0000166 ... Q3J125 24704788 PDBbind: -logKd/Ki=6.40, Kd=0.4uM
    15131 4p00:A (3.2) BS12 C2E 2.4.1.12 GO:0000166 ... Q3J125 24704788 PDBbind: -logKd/Ki=6.40, Kd=0.4uM
    15132 4p02:A (2.65) BS13 C2E 2.4.1.12 GO:0000166 ... Q3J125 24704788 PDBbind: -logKd/Ki=6.40, Kd=0.4uM
    15133 4p02:A (2.65) BS14 C2E 2.4.1.12 GO:0000166 ... Q3J125 24704788 PDBbind: -logKd/Ki=6.40, Kd=0.4uM
    15134 4p0n:A (2.08) BS01 1IS 3.1.4.17 GO:0004114 ... Q9Y233 24944747 MOAD: ic50=0.8nM
    PDBbind: -logKd/Ki=8.66, IC50=2.2nM
    BindingDB: IC50=0.800000nM
    15135 4p0v:A (2.4) BS02 1WO 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 24927548 PDBbind: -logKd/Ki=5.92, IC50=1.2uM
    15136 4p0w:A (2.406) BS01 1XH 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 24927548 PDBbind: -logKd/Ki=5.96, IC50=1.1uM
    15137 4p0x:A (2.5) BS01 1WO 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 24927548 PDBbind: -logKd/Ki=5.92, IC50=1.2uM
    15138 4p0x:A (2.5) BS02 1WO 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 24927548 PDBbind: -logKd/Ki=5.92, IC50=1.2uM
    15139 4p10:A (2.0) BS01 2B8 3.4.17.20 GO:0003331 ... Q96IY4 24588961 PDBbind: -logKd/Ki=8.10, IC50=8nM
    BindingDB: IC50=8.0nM
    15140 4p1r:A (2.243) BS02 2KR 3.1.4.17 GO:0004114 ... Q9Y233 24944747 MOAD: ic50=4.1nM
    PDBbind: -logKd/Ki=8.39, IC50=4.1nM
    BindingDB: IC50=4.1nM
    15141 4p1u:A (2.52) BS01 21G ? N/A P31345 25019388 PDBbind: -logKd/Ki=8.52, Kd<0.003uM
    15142 4p2t:A (2.15) BS01 24Q 3.4.21.97 GO:0004252 ... Q2HRB6 24977643 MOAD: ic50=3.7uM
    PDBbind: -logKd/Ki=5.43, IC50=3.7uM
    15143 4p3h:A (1.45) BS01 25G 3.4.21.97 GO:0004252 ... Q2HRB6 24977643 MOAD: ic50=1uM
    PDBbind: -logKd/Ki=6.00, Kd=1.0uM
    15144 4p44:A (1.75) BS04 2F7 3.4.17.21 GO:0004180 ... Q04609 26460595 MOAD: ic50=16nM
    PDBbind: -logKd/Ki=7.80, IC50=16nM
    15145 4p45:A (1.87) BS05 2F9 3.4.17.21 GO:0004180 ... Q04609 26460595 MOAD: ic50=16nM
    PDBbind: -logKd/Ki=7.80, IC50=16nM
    15146 4p4b:A (1.93) BS04 2G2 3.4.17.21 GO:0004180 ... Q04609 26460595 MOAD: ic50=14nM
    PDBbind: -logKd/Ki=7.85, IC50=14nM
    BindingDB: IC50=14nM
    15147 4p4d:A (1.65) BS04 2GR 3.4.17.21 GO:0004180 ... Q04609 26460595 MOAD: ic50=1800nM
    PDBbind: -logKd/Ki=5.74, IC50=1800nM
    15148 4p4e:A (1.67) BS05 2G4 3.4.17.21 GO:0004180 ... Q04609 26460595 MOAD: ic50=180nM
    PDBbind: -logKd/Ki=6.74, IC50=180nM
    15149 4p4f:A (1.86) BS04 2GB 3.4.17.21 GO:0004180 ... Q04609 26460595 MOAD: ic50=168nM
    PDBbind: -logKd/Ki=6.77, IC50=168nM
    15150 4p4i:A (1.87) BS04 2G5 3.4.17.21 GO:0004180 ... Q04609 26460595 MOAD: ic50=35nM
    PDBbind: -logKd/Ki=7.46, IC50=35nM
    15151 4p4j:A (1.66) BS04 2H9 3.4.17.21 GO:0004180 ... Q04609 26460595 MOAD: ic50=700nM
    PDBbind: -logKd/Ki=6.15, IC50=700nM
    15152 4p4t:A (2.3) BS01 GDP ? GO:0003924 ... P20591 25295396 PDBbind: -logKd/Ki=4.39, Kd=41.0uM
    15153 4p58:A (2.06) BS01 2F6 2.1.1.6 GO:0000287 ... O88587 24847974 MOAD: Kd=63uM
    PDBbind: -logKd/Ki=4.60, Ki=25uM
    BindingDB: Ki=63000nM
    15154 4p5d:A (2.11) BS01 N6P 3.2.2.- GO:0009159 ... O35820 25108359 MOAD: Ki=1.5uM
    PDBbind: -logKd/Ki=5.82, Ki=1.5uM
    BindingDB: Ki=1500nM
    15155 4p5d:C (2.11) BS01 N6P 3.2.2.- GO:0009159 ... O35820 25108359 MOAD: Ki=1.5uM
    PDBbind: -logKd/Ki=5.82, Ki=1.5uM
    BindingDB: Ki=1500nM
    15156 4p5e:B (1.35) BS01 N6P 3.2.2.- GO:0009159 ... O43598 25108359 MOAD: Ki=2.8uM
    PDBbind: -logKd/Ki=5.55, Ki=2.8uM
    BindingDB: Ki=2800nM
    15157 4p5z:A (2.002) BS01 Q7M 2.7.10.1 GO:0004672 ... P29320 25076195 MOAD: Kd=39.3nM
    PDBbind: -logKd/Ki=7.41, Kd=39.3nM
    BindingDB: Kd=3.9nM
    15158 4p6c:A (1.86) BS01 RES 4.1.99.12 GO:0000287 ... Q9KKP2 25792735 MOAD: Ki=100uM
    PDBbind: -logKd/Ki=4.00, Ki=100uM
    15159 4p6c:B (1.86) BS01 RES 4.1.99.12 GO:0000287 ... Q9KKP2 25792735 MOAD: Ki=100uM
    PDBbind: -logKd/Ki=4.00, Ki=100uM
    15160 4p6e:A (1.8) BS01 2FC 3.4.22.27 GO:0006508 ... P25774 25313327 MOAD: ic50=1290nM
    PDBbind: -logKd/Ki=5.89, IC50=1290nM
    BindingDB: IC50=1290nM
    15161 4p6e:A (1.8) BS02 2FC 3.4.22.27 GO:0006508 ... P25774 25313327 MOAD: ic50=1290nM
    PDBbind: -logKd/Ki=5.89, IC50=1290nM
    BindingDB: IC50=1290nM
    15162 4p6g:A (1.58) BS01 2FZ 3.4.22.27 GO:0006508 ... P25774 25313327 MOAD: ic50=7.7nM
    PDBbind: -logKd/Ki=8.11, IC50=7.70nM
    BindingDB: IC50=7.7nM
    15163 4p6w:A (1.951) BS02 MOF ? N/A P04150 24763108 MOAD: Ki=0.7nM
    PDBbind: -logKd/Ki=9.15, Ki=0.7nM
    BindingDB: Ki=0.700000nM
    15164 4p6x:A (2.5) BS02 HCY ? N/A P04150 24763108 MOAD: Ki=91nM
    PDBbind: -logKd/Ki=7.04, Ki=91nM
    BindingDB: Ki=30nM
    15165 4p72:C (2.62) BS01 2NL 6.1.1.20 GO:0000049 ... Q9I0A3 24936059 PDBbind: -logKd/Ki=4.09, IC50=82uM
    15166 4p73:C (3.03) BS01 GAX 6.1.1.20 GO:0000049 ... Q9I0A3 24936059 PDBbind: -logKd/Ki=7.66, IC50=22nM
    15167 4p74:C (2.7) BS01 2U9 6.1.1.20 GO:0000049 ... Q9I0A3 24936059 PDBbind: -logKd/Ki=5.00, IC50=10uM
    15168 4p75:C (2.96) BS01 2NM 6.1.1.20 GO:0000049 ... Q9I0A3 24936059 PDBbind: -logKd/Ki=4.10, IC50=80uM
    15169 4p7e:A (2.4) BS01 2HB 2.7.10.2 GO:0004672 ... O60674 25369270 PDBbind: -logKd/Ki=4.76, IC50=17.5uM
    BindingDB: IC50=>10000nM
    15170 4p7m:A (3.02) BS01 2OE 5.3.2.1
    5.3.3.12    		 GO:0005125 ... Q6Q3H7 25268646 PDBbind: -logKd/Ki=7.41, Ki=39nM
    15171 4p7s:A (2.87) BS01 2OK 5.3.2.1
    5.3.3.12    		 GO:0005125 ... Q6Q3H7 25268646 PDBbind: -logKd/Ki=7.42, Ki=38nM
    15172 4p7s:B (2.87) BS01 2OK 5.3.2.1
    5.3.3.12    		 GO:0005125 ... Q6Q3H7 25268646 PDBbind: -logKd/Ki=7.42, Ki=38nM
    15173 4p7s:B (2.87) BS02 2OK 5.3.2.1
    5.3.3.12    		 GO:0005125 ... Q6Q3H7 25268646 PDBbind: -logKd/Ki=7.42, Ki=38nM
    15174 4p90:A (2.49) BS01 2K0 2.7.11.1 GO:0004672 ... Q13153 N/A PDBbind: -logKd/Ki=7.19, IC50=64nM
    15175 4pax:A (2.8) BS01 NU1 2.4.2.-
    2.4.2.30    		 GO:0003950 ... P26446 9521710 PDBbind: -logKd/Ki=6.40, IC50=0.4uM
    15176 4pb1:A (2.803) BS01 RBV ? GO:0005337 ... Q9KPL5 25082345 PDBbind: -logKd/Ki=2.82, Kd=1530uM
    15177 4pb2:A (2.302) BS01 5UD ? GO:0005337 ... Q9KPL5 25082345 MOAD: Kd=16uM
    PDBbind: -logKd/Ki=4.80, Kd=16uM
    15178 4pce:A (1.293) BS01 2N0 ? N/A O60885 24767840 MOAD: ic50=7uM
    PDBbind: -logKd/Ki=5.15, IC50=7.0uM
    BindingDB: IC50=7000nM
    15179 4pci:A (1.25) BS01 2NJ ? N/A O60885 24767840 MOAD: ic50=7.5uM
    PDBbind: -logKd/Ki=5.12, IC50=7.5uM
    BindingDB: IC50=7500nM
    15180 4pcs:A (1.77) BS01 2M7 ? GO:0004560 ... Q8A3I4 25427942 PDBbind: -logKd/Ki=7.85, Ki=14nM
    15181 4pct:A (2.1) BS01 H76 3.2.1.51 GO:0004560 ... Q8A3I4 25427942 PDBbind: -logKd/Ki=7.15, Ki=70nM
    15182 4pd5:A (2.906) BS01 GEO ? GO:0005337 ... Q9KPL5 25082345 PDBbind: -logKd/Ki=2.86, Kd=1370uM
    15183 4pd6:A (2.08) BS01 URI ? GO:0005337 ... Q9KPL5 25082345 MOAD: Kd=36uM
    PDBbind: -logKd/Ki=4.44, Kd=36uM
    15184 4pd7:A (2.909) BS01 ZE8 ? GO:0005337 ... Q9KPL5 25082345 PDBbind: -logKd/Ki=3.92, Kd=120uM
    15185 4pd8:A (2.75) BS01 P0C ? GO:0005337 ... Q9KPL5 25082345 PDBbind: -logKd/Ki=6.03, Kd=0.94uM
    15186 4pd9:A (3.096) BS01 ADN ? GO:0005337 ... Q9KPL5 25082345 PDBbind: -logKd/Ki=3.33, Kd=470uM
    15187 4pda:A (2.608) BS01 CTN ? GO:0005337 ... Q9KPL5 25082345 PDBbind: -logKd/Ki=4.21, Kd=61uM
    15188 4pdb:A (2.6) BS01 rna ? GO:0003735 ... Q81VR6 25140011 PDBbind: Kd=110nM
    15189 4pde:A (2.8) BS01 GDP ? GO:0003824 ... P32177 25649206 PDBbind: -logKd/Ki=6.44, Kd~364nM
    15190 4pdk:A (2.8) BS01 3VV ? GO:0000062 ... Q9KQU8 25607896 PDBbind: -logKd/Ki=8.22, Kd=6nM
    15191 4pdk:A (2.8) BS02 3VV ? GO:0000062 ... Q9KQU8 25607896 PDBbind: -logKd/Ki=8.22, Kd=6nM
    15192 4pdk:A (2.8) BS03 3VV ? GO:0000062 ... Q9KQU8 25607896 PDBbind: -logKd/Ki=8.22, Kd=6nM
    15193 4pdk:A (2.8) BS04 3VV ? GO:0000062 ... Q9KQU8 25607896 PDBbind: -logKd/Ki=8.22, Kd=6nM
    15194 4pdk:B (2.8) BS01 3VV ? GO:0000062 ... Q9KQU8 25607896 PDBbind: -logKd/Ki=8.22, Kd=6nM
    15195 4pdk:B (2.8) BS02 3VV ? GO:0000062 ... Q9KQU8 25607896 PDBbind: -logKd/Ki=8.22, Kd=6nM
    15196 4pdk:B (2.8) BS03 3VV ? GO:0000062 ... Q9KQU8 25607896 PDBbind: -logKd/Ki=8.22, Kd=6nM
    15197 4pee:A (1.95) BS01 2OX ? GO:0004560 ... Q8A3I4 25427942 PDBbind: -logKd/Ki=8.32, Ki=4.8nM
    15198 4pf3:A (1.1) BS01 HFN ? N/A P08235 25187277 MOAD: ic50=51nM
    PDBbind: -logKd/Ki=7.29, IC50=51nM
    15199 4pf5:A (2.04) BS03 M3N ? GO:0005537 ... P02866 25483029 PDBbind: -logKd/Ki=5.48, Kd=3.3uM
    15200 4pg3:A (2.696) BS02 KRS 6.1.1.6 GO:0000166 ... Q8IDJ8 24935905 PDBbind: -logKd/Ki=7.85, Kd=14nM
    BindingDB: IC50=120nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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