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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    14201 4l0y:A (2.5) BS01 dna ? GO:0003677 ... Q03347 24646888 PDBbind: Kd=3.1nM
    14202 4l0y:A (2.5) BS02 dna ? GO:0003677 ... Q03347 24646888 PDBbind: Kd=3.1nM
    14203 4l0y:B (2.5) BS01 dna ? GO:0003700 ... P14921 24646888 PDBbind: Kd=3.1nM
    14204 4l0y:B (2.5) BS02 dna ? GO:0003700 ... P14921 24646888 PDBbind: Kd=3.1nM
    14205 4l10:A (1.7) BS02 A63 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 24116873 PDBbind: -logKd/Ki=7.15, IC50=71nM
    14206 4l19:A (1.66) BS06 1UA 3.4.24.- GO:0004222 ... P45452 25330343 MOAD: Ki=0.8uM
    PDBbind: -logKd/Ki=6.10, Ki=0.8uM
    BindingDB: IC50=2400nM, Ki=824nM
    14207 4l19:A (1.66) BS07 1UA 3.4.24.- GO:0004222 ... P45452 25330343 MOAD: Ki=0.8uM
    PDBbind: -logKd/Ki=6.10, Ki=0.8uM
    BindingDB: IC50=2400nM, Ki=824nM
    14208 4l1a:A (1.9) BS01 AB1 3.1.26.13 GO:0004190 ... Q000H7 23792096 MOAD: ic50=5.39nM
    PDBbind: -logKd/Ki=8.27, IC50=5.39nM
    14209 4l1a:B (1.9) BS01 AB1 3.1.26.13 GO:0004190 ... Q000H7 23792096 PDBbind: -logKd/Ki=8.27, IC50=5.39nM
    14210 4l23:A (2.501) BS01 X6K 2.7.11.1
    2.7.1.137
    2.7.1.153    		 GO:0001525 ... P42336 24900786 PDBbind: -logKd/Ki=7.75, IC50=17.9nM
    BindingDB: Kd=1.5nM, IC50=3.6nM
    14211 4l2f:A (2.05) BS01 1V3 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 24116873 PDBbind: -logKd/Ki=6.23, IC50=595nM
    14212 4l2g:A (2.05) BS02 1V4 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 24116873 PDBbind: -logKd/Ki=6.68, IC50=210nM
    14213 4l2k:A (2.1) BS01 1V8 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 24116873 PDBbind: -logKd/Ki=6.44, IC50=360nM
    14214 4l2l:A (1.648) BS02 1V6 3.3.2.6
    3.4.11.4    		 GO:0003723 ... P09960 24591641 MOAD: Ki=2.3uM
    PDBbind: -logKd/Ki=5.70, Ki=0.002mM
    BindingDB: IC50=12400nM, Kd=130nM, Ki=360nM
    14215 4l2x:F (2.55) BS01 YL2 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 23998921 PDBbind: -logKd/Ki=7.41, IC50=39nM
    BindingDB: IC50=115nM
    14216 4l31:A (2.0) BS01 F08 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 24116873 PDBbind: -logKd/Ki=6.79, IC50=162nM
    14217 4l32:A (1.85) BS02 1VF 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 24116873 PDBbind: -logKd/Ki=6.84, IC50=146nM
    14218 4l33:A (2.1) BS02 F70 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 24116873 PDBbind: -logKd/Ki=8.15, IC50=7nM
    14219 4l34:A (1.8) BS02 1VG 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 24116873 PDBbind: -logKd/Ki=6.94, IC50=114nM
    14220 4l3p:A (2.68) BS01 1UH 2.7.11.25 GO:0000287 ... O43318
    Q15750    		 23850198 PDBbind: -logKd/Ki=5.92, IC50=1.2uM
    14221 4l4l:A (2.122) BS01 1XC 2.4.2.12 GO:0005125 ... P43490 24797455 PDBbind: -logKd/Ki=8.30, IC50=0.005uM
    14222 4l4l:B (2.122) BS01 1XC 2.4.2.12 GO:0005125 ... P43490 24797455 PDBbind: -logKd/Ki=8.30, IC50=0.005uM
    14223 4l4l:B (2.122) BS02 1XC 2.4.2.12 GO:0005125 ... P43490 24797455 PDBbind: -logKd/Ki=8.30, IC50=0.005uM
    14224 4l4m:A (2.445) BS01 1XD 2.4.2.12 GO:0005125 ... P43490 24797455 MOAD: ic50=0.01uM
    PDBbind: -logKd/Ki=8.00, IC50=0.01uM
    BindingDB: IC50=10nM
    14225 4l4m:B (2.445) BS01 1XD 2.4.2.12 GO:0005125 ... P43490 24797455 MOAD: ic50=0.01uM
    PDBbind: -logKd/Ki=8.00, IC50=0.01uM
    BindingDB: IC50=10nM
    14226 4l4v:A (1.9) BS01 1VY ? N/A Q95460 23846752 MOAD: Kd=1.65uM
    PDBbind: -logKd/Ki=5.78, Kd=1.65uM
    14227 4l4z:A (2.3) BS01 D5X ? GO:0030246 ... P76141 24047255 MOAD: Kd=2.1uM
    PDBbind: -logKd/Ki=5.68, Kd=2.1uM
    14228 4l50:A (2.1) BS01 D8X ? GO:0030246 ... P76141 24047255 MOAD: Kd=0.88uM
    PDBbind: -logKd/Ki=6.06, Kd=0.88uM
    14229 4l51:A (1.9) BS01 HSX ? GO:0030246 ... P76141 24047255 MOAD: Kd=995uM
    PDBbind: -logKd/Ki=3.00, Kd=995uM
    14230 4l52:A (2.54) BS01 1UL 2.7.11.25 GO:0000287 ... O43318
    Q15750    		 23850198 PDBbind: -logKd/Ki=8.40, IC50=4nM
    14231 4l53:A (2.55) BS01 1UO 2.7.11.25 GO:0000287 ... O43318
    Q15750    		 23856049 PDBbind: -logKd/Ki=7.55, IC50=28nM
    14232 4l5j:A (2.6) BS01 HSX ? GO:0000987 ... P76141 24047255 PDBbind: -logKd/Ki=3.00, Kd~1mM
    14233 4l5r:C (1.873) BS01 dna ? GO:0002218 ... Q9R002 23850291 PDBbind: Kd=1.7uM
    14234 4l5r:C (1.873) BS02 dna ? GO:0002218 ... Q9R002 23850291 PDBbind: Kd=1.7uM
    14235 4l6q:A (2.79) BS01 1WU 2.7.11.1 GO:0004672 ... O75116 24049062 PDBbind: -logKd/Ki=6.27, IC50=0.54uM
    14236 4l6s:A (2.2) BS01 1WQ 2.4.2.-
    2.4.2.30    		 GO:0003950 ... P09874 23850199 MOAD: Kd=0.003uM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: Kd=3.0nM
    14237 4l6t:B (1.859) BS01 GAL ? GO:0005576 ... Q8GAV3 24095060 PDBbind: -logKd/Ki=7.49, Kd=32nM
    14238 4l6t:B (1.859) BS02 SIA ? GO:0005576 ... Q8GAV3 24095060 PDBbind: -logKd/Ki=7.49, Kd=32nM
    14239 4l6t:C (1.859) BS01 GAL ? GO:0005576 ... Q8GAV3 24095060 PDBbind: -logKd/Ki=7.49, Kd=32nM
    14240 4l6t:C (1.859) BS02 SIA ? GO:0005576 ... Q8GAV3 24095060 PDBbind: -logKd/Ki=7.49, Kd=32nM
    14241 4l70:A (2.0) BS01 1V9 2.4.2.- GO:0003950 ... Q9Y6F1 24188023 PDBbind: -logKd/Ki=5.66, IC50=2.2uM
    14242 4l7b:B (2.41) BS01 1VV ? N/A Q14145 24504667 MOAD: ic50=2.3uM
    PDBbind: -logKd/Ki=5.64, IC50=2.3uM
    BindingDB: Kd=1900nM, IC50=792nM, Ki=560nM, EC50=26000nM
    14243 4l7c:A (2.4) BS01 1VW ? N/A Q14145 24504667 MOAD: ic50=7.4uM
    PDBbind: -logKd/Ki=5.13, IC50=7.4uM
    14244 4l7d:A (2.25) BS01 1VX ? N/A Q14145 24504667 MOAD: ic50=0.75uM
    PDBbind: -logKd/Ki=6.12, IC50=0.75uM
    BindingDB: IC50=750nM
    14245 4l7f:A (1.95) BS01 1V5 2.7.11.24 GO:0004672 ... P45983 23916259 MOAD: ic50=160nM
    PDBbind: -logKd/Ki=6.80, IC50=0.16uM
    14246 4l7g:A (1.38) BS01 1W0 3.4.23.46 GO:0004190 ... P56817 N/A PDBbind: -logKd/Ki=4.00, IC50=99.3uM
    14247 4l7h:A (1.85) BS01 1W1 3.4.23.46 GO:0004190 ... P56817 N/A PDBbind: -logKd/Ki=3.70, IC50>200uM
    14248 4l7j:A (1.651) BS01 1W2 3.4.23.46 GO:0004190 ... P56817 N/A PDBbind: -logKd/Ki=3.70, IC50>200uM
    14249 4l7l:A (2.1) BS01 1VA 2.4.2.- GO:0003950 ... Q9Y6F1 24188023 PDBbind: -logKd/Ki=6.00, IC50=1uM
    14250 4l7n:A (1.8) BS01 1VB 2.4.2.- GO:0003950 ... Q9Y6F1 24188023 PDBbind: -logKd/Ki=4.84, IC50=14.4uM
    14251 4l7o:A (2.0) BS01 1VD 2.4.2.- GO:0003950 ... Q9Y6F1 24188023 PDBbind: -logKd/Ki=4.88, IC50=13.2uM
    14252 4l7r:A (2.2) BS01 M00 2.4.2.- GO:0003950 ... Q9Y6F1 24188023 PDBbind: -logKd/Ki=5.02, IC50=9.6uM
    14253 4l7u:A (2.8) BS01 1VC 2.4.2.- GO:0003950 ... Q9Y6F1 24188023 PDBbind: -logKd/Ki=5.66, IC50=2.2uM
    14254 4l8m:A (2.1) BS01 F46 2.7.11.24 GO:0000077 ... Q16539 24131218 MOAD: ic50=0.001uM
    PDBbind: -logKd/Ki=9.00, IC50=1nM
    BindingDB: IC50=1.000000nM, Kd=17nM
    14255 4l9i:A (2.32) BS01 8PR 2.7.11.14 GO:0001750 ... P28327 24220010 MOAD: Kd=13uM
    PDBbind: -logKd/Ki=4.89, Kd=13uM
    BindingDB: IC50=398100nM
    14256 4la7:A (1.98) BS01 A1O ? GO:0004864 ... O80992 23818638 MOAD: ic50=267nM
    PDBbind: -logKd/Ki=6.57, IC50=267nM
    14257 4lar:H (2.38) BS01 1WE N/A N/A N/A 24349338 PDBbind: -logKd/Ki=4.68, Kd=20.7uM
    14258 4lbl:A (1.58) BS01 BGC ? GO:0030246 ... P17931 24326249 PDBbind: -logKd/Ki=4.96, Kd=11uM
    14259 4lbl:A (1.58) BS02 GAL ? GO:0030246 ... P17931 24326249 PDBbind: -logKd/Ki=4.96, Kd=11uM
    14260 4lbo:A (1.65) BS01 BGC ? GO:0030246 ... P17931 24326249 PDBbind: -logKd/Ki=5.77, Kd=1.7uM
    14261 4lbo:A (1.65) BS02 GAL ? GO:0030246 ... P17931 24326249 PDBbind: -logKd/Ki=5.77, Kd=1.7uM
    14262 4lbp:A (1.87) BS01 1WG ? N/A Q45075 23955343 MOAD: Kd=11.4uM
    PDBbind: -logKd/Ki=4.94, Kd=11.4uM
    14263 4lbu:A (1.17) BS01 1WJ 2.4.2.29 GO:0002099 ... P28720 25483606 MOAD: Kd=276nM
    PDBbind: -logKd/Ki=6.56, Kd=276nM
    14264 4lc7:A (1.7) BS01 1WP 3.4.23.46 GO:0004190 ... P56817 N/A PDBbind: -logKd/Ki=4.93, IC50=11.8uM
    14265 4lch:A (1.596) BS03 1WN 3.5.1.108 GO:0006796 ... P47205 23914798 PDBbind: -logKd/Ki=10.62, Ki=24pM
    14266 4lck:A (3.2) BS01 rna ? GO:0003723 ... P46350 23892783 PDBbind: Kd=83nM
    14267 4lck:D (3.2) BS01 rna ? GO:0003723 ... P46350 23892783 PDBbind: Kd=83nM
    14268 4led:A (2.37) BS01 XXR ? N/A T2LG16 24516380 PDBbind: -logKd/Ki=2.30, Kd~5mM
    14269 4led:A (2.37) BS02 XXR ? N/A T2LG16 24516380 PDBbind: -logKd/Ki=2.30, Kd~5mM
    14270 4led:A (2.37) BS03 XXR ? N/A T2LG16 24516380 PDBbind: -logKd/Ki=2.30, Kd~5mM
    14271 4len:A (1.5) BS01 2GK 3.5.2.6 GO:0008800 ... Q9L5C8 24882105 PDBbind: -logKd/Ki=7.40, Ki=0.04uM
    14272 4leq:A (1.405) BS01 1WK 2.4.2.29 GO:0002099 ... P28720 25483606 MOAD: Kd=288nM
    PDBbind: -logKd/Ki=6.54, Kd=288nM
    14273 4lg2:A (2.7) BS01 rna ? N/A Q8JPY0 23824825 PDBbind: Kd=0.1uM
    14274 4lg2:D (2.7) BS01 rna ? N/A Q8JPY0 23824825 PDBbind: Kd=0.1uM
    14275 4lg2:D (2.7) BS02 rna ? N/A Q8JPY0 23824825 PDBbind: Kd=0.1uM
    14276 4lge:A (1.55) BS02 1Y0 2.3.2.27 N/A Q13490 23928071 MOAD: ic50=3.5nM
    PDBbind: -logKd/Ki=8.46, IC50=3.5nM
    14277 4lgg:A (2.41) BS01 VGG 2.7.10.2 GO:0004672 ... P00523 23841803 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    14278 4lgh:A (2.84) BS01 0JN 2.7.10.2 GO:0004672 ... P00523 23841803 PDBbind: -logKd/Ki=8.70, IC50=2nM
    BindingDB: IC50=620nM
    14279 4lgu:A (2.0) BS02 1YH 2.3.2.27 N/A Q13490 23928071 MOAD: ic50=2.1nM
    PDBbind: -logKd/Ki=8.68, IC50=2.1nM
    14280 4lh3:A (1.813) BS01 GUA 1.2.1.88 GO:0003842 ... Q8CHT0 23928095 MOAD: Ki=30mM
    PDBbind: -logKd/Ki=1.52, Ki=30mM
    14281 4lh5:A (2.19) BS01 LF0 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24261564 MOAD: ic50=0.23uM
    PDBbind: -logKd/Ki=6.70, IC50=0.20uM
    14282 4lh6:A (1.65) BS01 1X7 6.5.1.2 GO:0003911 ... Q837V6 24287382 MOAD: ic50=77uM
    PDBbind: -logKd/Ki=4.11, IC50=77uM
    14283 4lh7:A (1.9) BS01 1X8 6.5.1.2 GO:0003911 ... Q837V6 24287382 MOAD: ic50=34uM
    PDBbind: -logKd/Ki=4.47, IC50=34uM
    14284 4lhm:A (1.52) BS06 AZZ 2.4.2.4 GO:0004645 ... P07650 24699659 MOAD: Ki=0.68mM
    PDBbind: -logKd/Ki=3.39, Ki=0.41mM
    14285 4lhv:A (1.95) BS01 GDP 3.6.5.2 GO:0003924 ... P61006 24072714 PDBbind: -logKd/Ki=10.00, Kd=0.1nM
    14286 4li0:A (3.3) BS01 GDP 3.6.5.2 GO:0003924 ... P61006 24072714 PDBbind: -logKd/Ki=6.59, Kd=0.26uM
    14287 4li5:A (2.64) BS01 1WY 2.7.10.1 GO:0004672 ... P00533 23930994 PDBbind: -logKd/Ki=6.26, IC50=0.55uM
    14288 4li6:A (2.05) BS02 1XO 2.4.2.-
    2.4.2.30    		 GO:0003950 ... O95271 23844574 PDBbind: -logKd/Ki=6.97, IC50=0.106uM
    14289 4li7:A (2.2) BS01 1XP 2.4.2.-
    2.4.2.30    		 GO:0003950 ... O95271 23844574 PDBbind: -logKd/Ki=6.11, IC50=0.770uM
    14290 4li8:A (2.521) BS02 1XQ 2.4.2.-
    2.4.2.30    		 GO:0003950 ... O95271 23844574 PDBbind: -logKd/Ki=8.12, IC50=7.5nM
    BindingDB: IC50=15.4nM
    14291 4lil:A (2.6) BS03 UTP 2.7.7.102 GO:0000287 ... P49642 24239947 PDBbind: -logKd/Ki=4.90, Kd=12.5uM
    14292 4lj0:A (2.15) BS01 rna ? N/A G0SCL7 24071581 PDBbind: Kd=0.5uM
    14293 4lj0:A (2.15) BS02 rna ? N/A G0SCL7 24071581 PDBbind: Kd=0.5uM
    14294 4lj0:A (2.15) BS03 rna ? N/A G0SCL7 24071581 PDBbind: Kd=0.5uM
    14295 4lj3:A (1.7) BS01 C2E 3.1.4.52 N/A P21514 24451384 MOAD: Kd<1nM
    PDBbind: -logKd/Ki=9.00, Kd<1nM
    14296 4lj5:A (2.4) BS01 ADP ? GO:0005524 ... Q9RA63 24531492 PDBbind: -logKd/Ki=6.29, Kd=0.51uM
    14297 4lj8:A (2.1) BS01 ADP ? GO:0005524 ... Q9RA63 24531492 PDBbind: -logKd/Ki=5.82, Kd=1.5uM
    14298 4ljh:A (1.45) BS02 GAL ? GO:0005737 ... Q05097 23869965 PDBbind: -logKd/Ki=4.71, Kd=19.4uM
    14299 4ljr:A (1.8) BS01 dna ? GO:0009294 ... O25100 24369431 PDBbind: Kd=30.6nM
    14300 4ljr:B (1.8) BS01 dna ? GO:0009294 ... O25100 24369431 PDBbind: Kd=30.6nM
    14301 4lk6:A (2.859) BS02 LRD ? GO:0005737 ... Q05097 23869965 PDBbind: -logKd/Ki=5.20, Kd=6.3uM
    14302 4lk6:A (2.859) BS03 GAL ? GO:0005737 ... Q05097 23869965 PDBbind: -logKd/Ki=5.20, Kd=6.3uM
    14303 4lk7:A (1.758) BS02 GAL ? GO:0005737 ... Q05097 23869965 PDBbind: -logKd/Ki=5.04, Kd=9.1uM
    14304 4lkd:A (2.307) BS01 GAL ? GO:0005737 ... Q05097 24307364 PDBbind: -logKd/Ki=5.35, Kd=4.5uM
    14305 4lke:A (1.653) BS01 GAL ? GO:0005737 ... Q05097 24307364 PDBbind: -logKd/Ki=5.37, Kd=4.3uM
    14306 4lkf:A (1.64) BS01 GAL ? GO:0005737 ... Q05097 24307364 PDBbind: -logKd/Ki=5.37, Kd=4.3uM
    14307 4lkf:B (1.64) BS01 GAL ? GO:0005737 ... Q05097 24307364 PDBbind: -logKd/Ki=5.37, Kd=4.3uM
    14308 4lkg:A (2.994) BS01 GAL ? GO:0005886 ... V5IRV0 24009358 PDBbind: -logKd/Ki=6.80, Kd=0.16uM
    14309 4lkg:A (2.994) BS02 SIA ? GO:0005886 ... V5IRV0 24009358 PDBbind: -logKd/Ki=6.80, Kd=0.16uM
    14310 4lkh:A (3.099) BS01 SIA ? GO:0005886 ... V5IRV0 24009358 PDBbind: -logKd/Ki=3.00, Kd>1.0mM
    14311 4lkj:A (2.798) BS01 SIA ? GO:0005886 ... V5IRV5 24009358 PDBbind: -logKd/Ki=6.70, Kd=0.20uM
    14312 4lkk:A (2.491) BS01 GAL ? GO:0005886 ... V5IRV5 24009358 PDBbind: -logKd/Ki=5.92, Kd=1.20uM
    14313 4lkk:A (2.491) BS02 SIA ? GO:0005886 ... V5IRV5 24009358 PDBbind: -logKd/Ki=5.92, Kd=1.20uM
    14314 4lkl:A (1.58) BS02 ADM 2.7.11.21 N/A P53350 24223211 PDBbind: -logKd/Ki=6.09, IC50=0.82uM
    14315 4lko:A (2.43) BS01 1WH 3.4.14.5 GO:0001618 ... P27487 23964740 MOAD: Ki=8.3nM
    PDBbind: -logKd/Ki=8.22, Ki=6.0nM
    14316 4lkq:A (1.62) BS01 1XM 3.1.4.17 GO:0004114 ... Q9Y233 24375910 MOAD: Ki=450uM
    PDBbind: -logKd/Ki=3.35, Ki=450uM
    14317 4lkt:A (2.57) BS01 EIC ? GO:0001972 ... Q01469 24692551 PDBbind: -logKd/Ki=5.90, Ki=1.26uM
    BindingDB: Ki=1.26e+3nM
    14318 4ll3:A (1.95) BS01 017 ? GO:0004190 ... Q9WFL7 24785545 MOAD: Kd=2.7pM
    PDBbind: -logKd/Ki=11.57, Kd=2.7pM
    14319 4ll3:A (1.95) BS02 017 ? GO:0004190 ... Q9WFL7 24785545 MOAD: Kd=2.7pM
    PDBbind: -logKd/Ki=11.57, Kd=2.7pM
    14320 4ll3:B (1.95) BS01 017 ? GO:0004190 ... Q9WFL7 24785545 PDBbind: -logKd/Ki=11.57, Kd=2.7pM
    14321 4ll3:B (1.95) BS02 017 ? GO:0004190 ... Q9WFL7 24785545 PDBbind: -logKd/Ki=11.57, Kd=2.7pM
    14322 4llk:A (1.55) BS01 MEW 3.1.4.17 GO:0004114 ... Q9Y233 24375910 MOAD: Ki=990uM
    PDBbind: -logKd/Ki=3.00, Ki=990uM
    BindingDB: Ki=990000nM
    14323 4llp:A (1.75) BS01 4ZE 3.1.4.17 GO:0004114 ... Q9Y233 24375910 MOAD: Ki=16uM
    PDBbind: -logKd/Ki=4.80, Ki=16uM
    BindingDB: Ki=16000nM
    14324 4llp:A (1.75) BS02 4ZE 3.1.4.17 GO:0004114 ... Q9Y233 24375910 MOAD: Ki=16uM
    PDBbind: -logKd/Ki=4.80, Ki=16uM
    BindingDB: Ki=16000nM
    14325 4llx:A (1.75) BS01 5ZE 3.1.4.17 GO:0004114 ... Q9Y233 24375910 MOAD: Ki=1300uM
    PDBbind: -logKd/Ki=2.89, Ki=1300uM
    BindingDB: Ki=1300000nM
    14326 4lm0:A (1.66) BS01 5NI 3.1.4.17 GO:0004114 ... Q9Y233 24375910 MOAD: Ki=560uM
    PDBbind: -logKd/Ki=3.25, Ki=560uM
    BindingDB: Ki=560000nM
    14327 4lm1:A (1.6) BS01 7ZE 3.1.4.17 GO:0004114 ... Q9Y233 24375910 MOAD: Ki=590uM
    PDBbind: -logKd/Ki=3.23, Ki=590uM
    BindingDB: Ki=590000nM
    14328 4lm2:A (1.55) BS01 8ZE 3.1.4.17 GO:0004114 ... Q9Y233 24375910 MOAD: Ki=940uM
    PDBbind: -logKd/Ki=3.03, Ki=940uM
    BindingDB: Ki=940000nM
    14329 4lm3:A (1.49) BS01 9ZE 3.1.4.17 GO:0004114 ... Q9Y233 24375910 MOAD: Ki=1200uM
    PDBbind: -logKd/Ki=2.92, Ki=1200uM
    BindingDB: Ki=1200000nM
    14330 4lm4:A (1.48) BS01 JPZ 3.1.4.17 GO:0004114 ... Q9Y233 24375910 MOAD: Ki=910uM
    PDBbind: -logKd/Ki=3.04, Ki=910uM
    14331 4lm5:A (2.25) BS01 Q17 2.7.11.1 GO:0004672 ... P11309 24531473 PDBbind: -logKd/Ki=6.82, IC50=150nM
    14332 4lmn:A (2.8) BS03 EUI 2.7.12.2 GO:0004672 ... Q02750 23934108 PDBbind: -logKd/Ki=10.30, Ki=0.05nM
    BindingDB: IC50=4.2nM
    14333 4lmu:A (2.38) BS01 QUE 2.7.11.1 GO:0004672 ... P11309 24531473 PDBbind: -logKd/Ki=7.26, IC50=55nM
    BindingDB: IC50=1100nM, Kd=25nM
    14334 4ln7:A (1.73) BS03 1ZQ N/A GO:0003723 ... N/A 23978130 MOAD: ic50=0.041uM
    PDBbind: -logKd/Ki=7.39, IC50=41nM
    14335 4lnb:B (1.752) BS03 ED5 2.5.1.58 GO:0003824 ... Q4WPS9 24347326 PDBbind: -logKd/Ki=6.56, IC50=275nM
    14336 4lnf:A (2.949) BS03 GLN 6.3.1.2 GO:0000287 ... P12425 24158439 PDBbind: -logKd/Ki=2.62, IC50=2.4mM
    14337 4lnf:B (2.949) BS03 GLN 6.3.1.2 GO:0000287 ... P12425 24158439 PDBbind: -logKd/Ki=2.62, IC50=2.4mM
    14338 4lng:B (1.905) BS02 JAN 2.5.1.58 GO:0003824 ... Q4WPS9 24347326 PDBbind: -logKd/Ki=5.62, IC50=2400nM
    14339 4lno:A (2.9) BS03 GLN 6.3.1.2 GO:0000287 ... P12425 24158439 PDBbind: -logKd/Ki=2.62, Kd=2.4mM
    14340 4lno:B (2.9) BS03 GLN 6.3.1.2 GO:0000287 ... P12425 24158439 PDBbind: -logKd/Ki=2.62, Kd=2.4mM
    14341 4lnq:A (2.0) BS01 dna ? GO:0002218 ... Q9R002 24419611 PDBbind: Kd=1.33uM
    14342 4lnq:A (2.0) BS02 dna ? GO:0002218 ... Q9R002 24419611 PDBbind: Kd=1.33uM
    14343 4lnq:B (2.0) BS01 dna ? GO:0002218 ... Q9R002 24419611 PDBbind: Kd=1.33uM
    14344 4lnq:B (2.0) BS02 dna ? GO:0002218 ... Q9R002 24419611 PDBbind: Kd=1.33uM
    14345 4lnw:A (1.9) BS01 T3 ? GO:0003677 ... P10827 24552590 PDBbind: -logKd/Ki=7.04, Kd=90.9nM
    14346 4lnw:A (1.9) BS02 T3 ? GO:0003677 ... P10827 24552590 PDBbind: -logKd/Ki=7.04, Kd=90.9nM
    14347 4loh:A (2.25) BS01 1SY ? GO:0002218 ... Q86WV6 23910378 MOAD: Kd=5.3uM
    PDBbind: -logKd/Ki=6.96, Kd=0.11uM
    14348 4loh:B (2.25) BS01 1SY ? GO:0002218 ... Q86WV6 23910378 PDBbind: -logKd/Ki=6.96, Kd=0.11uM
    14349 4loi:A (1.89) BS01 1YC ? GO:0002218 ... Q86WV6 23910378 PDBbind: -logKd/Ki=6.77, Kd=0.17uM
    BindingDB: EC50=30nM, Kd=287000nM
    14350 4loi:B (1.89) BS01 1YC ? GO:0002218 ... Q86WV6 23910378 MOAD: Kd=0.17uM
    PDBbind: -logKd/Ki=6.77, Kd=0.17uM
    BindingDB: EC50=30nM, Kd=287000nM
    14351 4loj:A (1.77) BS01 1SY ? GO:0002218 ... Q3TBT3 23910378 PDBbind: -logKd/Ki=6.52, Kd=0.3uM
    14352 4loj:B (1.77) BS01 1SY ? GO:0002218 ... Q3TBT3 23910378 PDBbind: -logKd/Ki=6.52, Kd=0.3uM
    14353 4loo:A (1.95) BS02 SB4 2.7.11.24 GO:0000077 ... P47811 24037507 PDBbind: -logKd/Ki=8.15, Kd=7nM
    14354 4lop:A (2.049) BS03 SB4 2.7.11.24 GO:0000077 ... P47811 24037507 PDBbind: -logKd/Ki=8.15, Kd=0.007uM
    14355 4loq:A (2.319) BS03 SB4 2.7.11.24 GO:0000077 ... P47811 24037507 PDBbind: -logKd/Ki=8.15, Kd=0.007uM
    14356 4lov:A (1.5) BS01 KGM ? GO:0007155 ... P08191 24476493 MOAD: Kd=17.1nM
    PDBbind: -logKd/Ki=7.77, Kd=17.1nM
    14357 4loy:H (1.77) BS03 6XS 3.4.21.5 GO:0004252 ... P00734 24175584 PDBbind: -logKd/Ki=8.09, Ki=8.1nM
    14358 4lp0:A (1.95) BS01 1YM 5.6.2.2 GO:0003677 ... Q8DQB5 24098982 MOAD: ic50<10nM
    PDBbind: -logKd/Ki=8.00, IC50<0.01uM
    14359 4lp6:A (2.15) BS01 Q4I 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 24288253 PDBbind: -logKd/Ki=8.27, Kd=5.36nM
    14360 4lp6:A (2.15) BS04 Q4I 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 24288253 PDBbind: -logKd/Ki=8.27, Kd=5.36nM
    14361 4lpb:A (1.75) BS01 1YP 5.6.2.2 GO:0003677 ... Q8DQB5 24098982 MOAD: ic50<10nM
    PDBbind: -logKd/Ki=8.00, IC50<0.01uM
    14362 4lpf:A (2.3) BS01 3TR N/A GO:0000105 ... N/A N/A PDBbind: -logKd/Ki=3.51, Ki=310uM
    14363 4lpg:F (2.35) BS01 1MV 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 24911527 MOAD: Kd=55.6uM
    PDBbind: -logKd/Ki=4.25, Kd=55.6uM
    BindingDB: IC50=390nM, Kd=3200nM
    14364 4lph:F (2.3) BS02 YL3 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 24911527 MOAD: Kd=9.2uM
    PDBbind: -logKd/Ki=5.04, Kd=9.2uM
    BindingDB: IC50=5000nM, Kd=9200nM
    14365 4lps:A (2.0) BS02 GDP ? GO:0003924 ... O25560 24338018 PDBbind: -logKd/Ki=5.74, Kd=1.8uM
    14366 4lps:A (2.0) BS04 GDP ? GO:0003924 ... O25560 24338018 PDBbind: -logKd/Ki=5.74, Kd=1.8uM
    14367 4lq3:A (2.6) BS02 20V 3.6.1.15 GO:0000166 ... Q2N379 24316032 PDBbind: -logKd/Ki=6.35, IC50=0.45uM
    14368 4lq3:A (2.6) BS03 20V 3.6.1.15 GO:0000166 ... Q2N379 24316032 PDBbind: -logKd/Ki=6.35, IC50=0.45uM
    14369 4lq3:A (2.6) BS04 20V 3.6.1.15 GO:0000166 ... Q2N379 24316032 PDBbind: -logKd/Ki=6.35, IC50=0.45uM
    14370 4lq9:A (2.04) BS01 21D 3.6.1.15 GO:0000166 ... Q2N379 24316032 PDBbind: -logKd/Ki=4.85, IC50=14uM
    14371 4lq9:A (2.04) BS02 21D 3.6.1.15 GO:0000166 ... Q2N379 24316032 PDBbind: -logKd/Ki=4.85, IC50=14uM
    14372 4lqg:A (1.77) BS05 CTW 3.4.17.21 GO:0004180 ... Q04609 27228467 PDBbind: -logKd/Ki=8.89, IC50=1.3nM
    BindingDB: IC50=1300nM
    14373 4lqy:A (1.54) BS01 AMP 3.6.1.29 N/A Q9Y6X5 24338010 MOAD: ic50=129uM
    PDBbind: -logKd/Ki=3.89, IC50=129uM
    14374 4lrh:A (2.8) BS01 FOL ? N/A P15328 23851396 PDBbind: -logKd/Ki=9.72, Kd=0.19nM
    14375 4lrr:A (2.41) BS01 CF9 2.1.1.45 GO:0004799 ... P0A886 24147825 MOAD: Ki=6uM
    PDBbind: -logKd/Ki=5.22, Ki=6uM
    14376 4lsj:A (2.35) BS02 LSJ ? N/A P04150 24446728 MOAD: Ki=0.268nM
    PDBbind: -logKd/Ki=9.57, Ki=0.268nM
    BindingDB: Ki=0.268000nM
    14377 4lts:A (1.692) BS01 LTS 2.4.2.12 GO:0005125 ... P43490 24279990 MOAD: ic50=4.4nM
    PDBbind: -logKd/Ki=8.36, IC50=4.4nM
    BindingDB: IC50=6.20nM
    14378 4lts:B (1.692) BS01 LTS 2.4.2.12 GO:0005125 ... P43490 24279990 MOAD: ic50=4.4nM
    PDBbind: -logKd/Ki=8.36, IC50=4.4nM
    BindingDB: IC50=6.20nM
    14379 4luo:A (1.54) BS01 1DZ ? GO:0003677 ... P27694 24147804 MOAD: Kd=580uM
    PDBbind: -logKd/Ki=3.24, Kd=580uM
    BindingDB: Kd=580000nM
    14380 4luo:A (1.54) BS02 1DZ ? GO:0003677 ... P27694 24147804 MOAD: Kd=580uM
    PDBbind: -logKd/Ki=3.24, Kd=580uM
    BindingDB: Kd=580000nM
    14381 4luv:A (1.4) BS01 1XS ? GO:0003677 ... P27694 24147804 MOAD: Kd=1400uM
    PDBbind: -logKd/Ki=2.85, Kd=1400uM
    BindingDB: Kd=710000nM
    14382 4luz:A (1.9) BS01 1XT ? GO:0003677 ... P27694 24147804 MOAD: Kd=20uM
    PDBbind: -logKd/Ki=4.70, Kd=20uM
    BindingDB: Kd=26000nM
    14383 4lv1:A (1.74) BS01 NL9 3.5.2.6 GO:0008800 ... P00811 25344815 PDBbind: -logKd/Ki=7.40, Ki=0.04uM
    14384 4lv1:A (1.74) BS02 NL9 3.5.2.6 GO:0008800 ... P00811 25344815 PDBbind: -logKd/Ki=7.40, Ki=0.04uM
    14385 4lv2:A (1.65) BS01 N95 3.5.2.6 GO:0008800 ... P00811 25344815 PDBbind: -logKd/Ki=8.00, Ki=0.01uM
    14386 4lv3:A (1.42) BS01 25N 3.5.2.6 GO:0008800 ... P00811 25344815 PDBbind: -logKd/Ki=5.49, Ki=3.2uM
    14387 4lv4:A (2.08) BS03 8HC 4.1.2.13 GO:0004332 ... P9WQA3 24325645 MOAD: Kd=9.39uM
    PDBbind: -logKd/Ki=5.00, IC50=10uM
    BindingDB: Kd=6940nM, IC50=14000nM
    14388 4lvt:A (2.05) BS01 1XJ ? GO:0042981 ... P10415 23291630 PDBbind: -logKd/Ki=10.36, Ki=44pM
    BindingDB: Ki=<1.000000nM, IC50=<15nM
    14389 4lw1:A (1.631) BS01 1XS ? GO:0003677 ... P27694 24147804 MOAD: Kd=710uM
    PDBbind: -logKd/Ki=3.15, Kd=710uM
    BindingDB: Kd=710000nM
    14390 4lw1:A (1.631) BS02 1XS ? GO:0003677 ... P27694 24147804 MOAD: Kd=710uM
    PDBbind: -logKd/Ki=3.15, Kd=710uM
    BindingDB: Kd=710000nM
    14391 4lwc:A (1.61) BS01 1XU ? GO:0003677 ... P27694 24147804 PDBbind: -logKd/Ki=6.72, Kd=0.19uM
    BindingDB: Kd=1.7nM
    14392 4lwe:A (1.5) BS01 FJ2 3.6.4.10 GO:0005524 ... P07900 25313505 PDBbind: -logKd/Ki=7.15, IC50=0.07uM
    BindingDB: IC50=70nM
    14393 4lwh:A (1.7) BS01 FJ5 3.6.4.10 GO:0005524 ... P07900 25313505 PDBbind: -logKd/Ki=7.57, IC50=0.027uM
    BindingDB: IC50=27nM
    14394 4lwi:A (1.7) BS01 FJ6 3.6.4.10 GO:0005524 ... P07900 25313505 PDBbind: -logKd/Ki=7.64, IC50=0.023uM
    BindingDB: IC50=23nM
    14395 4lwt:A (1.6) BS01 20Q 2.3.2.27 GO:0005634 ... P56273 24997575 MOAD: ic50=3.9uM
    PDBbind: -logKd/Ki=5.41, IC50=3.9uM
    14396 4lwu:A (1.14) BS01 20U 2.3.2.27 GO:0005634 ... P56273 24997575 MOAD: ic50=0.005uM
    PDBbind: -logKd/Ki=8.30, IC50=0.005uM
    14397 4lwv:A (2.32) BS01 20W 2.3.2.27 GO:0005634 ... P56273 24900784 MOAD: ic50=7nM
    PDBbind: -logKd/Ki=8.22, IC50=6nM
    14398 4lww:A (1.641) BS01 LWW 2.4.2.12 GO:0005125 ... P43490 24279990 MOAD: ic50=29nM
    PDBbind: -logKd/Ki=7.54, IC50=29nM
    BindingDB: IC50=29nM
    14399 4lww:B (1.641) BS01 LWW 2.4.2.12 GO:0005125 ... P43490 24279990 MOAD: ic50=29nM
    PDBbind: -logKd/Ki=7.54, IC50=29nM
    BindingDB: IC50=29nM
    14400 4lxa:A (1.95) BS01 1YS 3.4.23.46 GO:0004190 ... P56817 23981898 MOAD: ic50=0.002uM
    PDBbind: -logKd/Ki=8.70, IC50=2nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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