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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    14001 4k6v:A (1.5) BS02 18D ? GO:0007155 ... Q64823 26177934 PDBbind: -logKd/Ki=4.63, IC50=23.4uM
    14002 4k6v:B (1.5) BS02 18D ? GO:0007155 ... Q64823 26177934 PDBbind: -logKd/Ki=4.63, IC50=23.4uM
    14003 4k6v:C (1.5) BS01 18D ? GO:0007155 ... Q64823 26177934 PDBbind: -logKd/Ki=4.63, IC50=23.4uM
    14004 4k6w:A (1.5) BS01 18D ? GO:0007155 ... Q64823 26177934 PDBbind: -logKd/Ki=5.35, IC50=4.5uM
    14005 4k6w:B (1.5) BS01 18D ? GO:0007155 ... Q64823 26177934 PDBbind: -logKd/Ki=5.35, IC50=4.5uM
    14006 4k6w:C (1.5) BS01 18D ? GO:0007155 ... Q64823 26177934 PDBbind: -logKd/Ki=5.35, IC50=4.5uM
    14007 4k6z:A (2.73) BS01 1Q3 2.7.10.2 GO:0004672 ... P23458 24042009 PDBbind: -logKd/Ki=8.70, Ki=2nM
    14008 4k77:B (2.4) BS01 1Q4 2.7.10.2 GO:0004672 ... P23458 24042009 MOAD: Ki=235nM
    PDBbind: -logKd/Ki=6.63, Ki=235nM
    BindingDB: Ki=235nM
    14009 4k7i:A (2.25) BS01 CAQ 1.11.1.24 GO:0008379 ... P30044 25025339 MOAD: Kd=1500uM
    PDBbind: -logKd/Ki=2.82, Kd=1500uM
    14010 4k7n:A (2.3) BS01 MCT 1.11.1.24 GO:0008379 ... P30044 25025339 MOAD: Kd=330uM
    PDBbind: -logKd/Ki=3.48, Kd=330uM
    14011 4k7n:B (2.3) BS01 MCT 1.11.1.24 GO:0008379 ... P30044 25025339 MOAD: Kd=330uM
    PDBbind: -logKd/Ki=3.48, Kd=330uM
    14012 4k7o:A (1.98) BS01 EKZ 1.11.1.24 GO:0008379 ... P30044 25025339 MOAD: Kd=50uM
    PDBbind: -logKd/Ki=4.30, Kd=50uM
    14013 4k8a:A (2.91) BS01 K8A 2.7.10.2 GO:0004672 ... Q05397 23973211 PDBbind: -logKd/Ki=4.02, Kd=95uM
    14014 4k8o:A (2.65) BS01 ATP 7.4.2.14 GO:0005524 ... P36370 25377891 PDBbind: -logKd/Ki=3.77, Kd=170uM
    14015 4k8s:A (2.39) BS01 1QT 3.4.23.46 GO:0004190 ... P56817 23769639 MOAD: ic50=0.036uM
    PDBbind: -logKd/Ki=7.44, IC50=36nM
    14016 4k9h:A (2.29) BS01 1QU 3.4.23.46 GO:0004190 ... P56817 23769639 MOAD: ic50=0.076uM
    PDBbind: -logKd/Ki=7.12, IC50=76nM
    14017 4k9y:A (2.0) BS01 K9Y 2.7.10.2 GO:0004672 ... Q05397 23973211 MOAD: Kd=0.111uM
    PDBbind: -logKd/Ki=6.95, Kd=0.111uM
    BindingDB: Kd=111nM, IC50=750nM
    14018 4kab:A (2.71) BS01 4KA 2.7.10.2 GO:0004672 ... Q05397 23973211 PDBbind: -logKd/Ki=4.03, Kd=93uM
    14019 4kai:A (2.3) BS01 1PV 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 23672667 PDBbind: -logKd/Ki=7.30, IC50=50nM
    14020 4kai:A (2.3) BS02 1PV 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 23672667 PDBbind: -logKd/Ki=7.30, IC50=50nM
    14021 4kao:A (2.39) BS01 KAO 2.7.10.2 GO:0004672 ... Q05397 23973211 MOAD: Kd=0.77uM
    PDBbind: -logKd/Ki=6.11, Kd=0.77uM
    BindingDB: IC50=>10000nM, Kd=770nM
    14022 4kax:A (1.85) BS01 GTP 3.6.5.2 GO:0001726 ... P62330 23940353 PDBbind: -logKd/Ki=4.77, Kd=17uM
    14023 4kb7:A (1.85) BS01 690 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 23672667 PDBbind: -logKd/Ki=7.49, IC50=32nM
    14024 4kb8:A (1.95) BS01 1QN 2.7.11.1
    2.7.11.26    		 GO:0004672 ... P48730 23919824 MOAD: ic50=12.9nM
    PDBbind: -logKd/Ki=7.89, IC50=12.9nM
    BindingDB: IC50=64nM
    14025 4kb9:A (1.29) BS01 G79 3.4.23.16 GO:0004190 ... Q7SSI0 23947685 MOAD: Ki=0.01nM
    PDBbind: -logKd/Ki=11.00, Ki=0.01nM
    14026 4kb9:B (1.29) BS01 G79 3.4.23.16 GO:0004190 ... Q7SSI0 23947685 PDBbind: -logKd/Ki=11.00, Ki=0.01nM
    14027 4kba:A (1.98) BS01 1QM 2.7.11.1
    2.7.11.26    		 GO:0004672 ... P48730 23919824 MOAD: ic50=6nM
    PDBbind: -logKd/Ki=8.22, IC50=6.0nM
    BindingDB: IC50=6.0nM
    14028 4kbc:A (1.98) BS01 1QJ 2.7.11.1
    2.7.11.26    		 GO:0004672 ... P48730 23919824 PDBbind: -logKd/Ki=7.85, IC50=14.2nM
    14029 4kbi:A (2.06) BS01 1C0 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 23672667 PDBbind: -logKd/Ki=7.49, IC50=32nM
    14030 4kbk:A (2.1) BS01 1QG 2.7.11.1
    2.7.11.26    		 GO:0004672 ... P48730 23919824 PDBbind: -logKd/Ki=8.18, IC50=6.6nM
    BindingDB: IC50=6.6nM
    14031 4kby:A (2.36) BS01 C2E ? GO:0002218 ... Q3TBT3 23519410 MOAD: Ka=5390000M^-1
    PDBbind: -logKd/Ki=6.73, Kd=186nM
    14032 4kby:B (2.36) BS01 C2E ? GO:0002218 ... Q3TBT3 23519410 PDBbind: -logKd/Ki=6.73, Kd=186nM
    14033 4kc1:A (1.5) BS02 WS1 2.4.1.37
    2.4.1.40    		 GO:0005975 ... P16442 24108680 PDBbind: -logKd/Ki=2.91, IC50=1220uM
    14034 4kc2:A (1.7) BS02 WS2 2.4.1.37
    2.4.1.40    		 GO:0005975 ... P16442 24108680 PDBbind: -logKd/Ki=3.31, IC50=493uM
    14035 4kc4:A (1.6) BS02 WS3 2.4.1.37
    2.4.1.40    		 GO:0005975 ... P16442 24108680 PDBbind: -logKd/Ki=3.23, IC50=584uM
    14036 4kcg:A (2.09) BS01 1QC 2.7.1.113
    2.7.1.74
    2.7.1.76    		 GO:0004136 ... P27707 24567448 PDBbind: -logKd/Ki=8.30, IC50=5nM
    BindingDB: IC50=4.9nM, Ki=0.500000nM
    14037 4kcx:A (2.0) BS01 1QK ? N/A Q58F21 24007471 MOAD: Kd=37uM
    PDBbind: -logKd/Ki=4.43, Kd=37uM
    14038 4ke0:A (2.3) BS01 1R8 3.4.23.46 GO:0004190 ... P56817 23769639 MOAD: ic50=0.017uM
    PDBbind: -logKd/Ki=7.77, IC50=17nM
    14039 4ke1:A (1.91) BS01 1R6 3.4.23.46 GO:0004190 ... P56817 23769639 MOAD: ic50=0.0025uM
    PDBbind: -logKd/Ki=8.60, IC50=2.5nM
    14040 4keq:A (2.279) BS03 5PN 3.1.1.27 GO:0016787 ... Q988B9 24699732 PDBbind: -logKd/Ki=3.82, Ki=150uM
    14041 4keq:A (2.279) BS04 5PN 3.1.1.27 GO:0016787 ... Q988B9 24699732 PDBbind: -logKd/Ki=3.82, Ki=150uM
    14042 4kfp:A (1.84) BS01 1R7 2.4.2.12 GO:0005125 ... P43490 23899614 MOAD: ic50=0.01uM
    PDBbind: -logKd/Ki=8.00, IC50=10nM
    14043 4kfp:B (1.84) BS01 1R7 2.4.2.12 GO:0005125 ... P43490 23899614 MOAD: ic50=0.01uM
    PDBbind: -logKd/Ki=8.00, IC50=10nM
    14044 4kfq:A (2.2) BS01 KFQ ? GO:0015276 ... P35439 24072709 PDBbind: -logKd/Ki=8.23, Kd=5.86nM
    14045 4kif:A (2.5) BS01 PPY 2.1.1.281 GO:0008168 ... Q643C8 24914966 PDBbind: -logKd/Ki=4.84, Kd=14.6uM
    14046 4kif:A (2.5) BS04 PPY 2.1.1.281 GO:0008168 ... Q643C8 24914966 PDBbind: -logKd/Ki=4.84, Kd=14.6uM
    14047 4kii:A (1.85) BS01 RHL ? GO:0005515 ... P02754 N/A PDBbind: -logKd/Ki=6.23, Kd=0.59uM
    14048 4kij:A (2.8) BS01 KIJ 4.2.1.10 GO:0003855 ... P9WPX7 25234229 PDBbind: -logKd/Ki=4.30, Ki=50uM
    14049 4kil:A (1.75) BS03 1R5 N/A GO:0003723 ... N/A 24936242 MOAD: ic50=0.5uM
    PDBbind: -logKd/Ki=6.30, IC50=0.5uM
    14050 4kin:A (1.97) BS01 1M8 2.7.11.24 GO:0000077 ... Q16539 23746475 MOAD: ic50=4.8nM
    PDBbind: -logKd/Ki=8.32, IC50=4.8nM
    BindingDB: IC50=4.8nM
    14051 4kio:A (2.18) BS01 G5K 2.7.10.2 GO:0004672 ... Q08881 23935099 MOAD: ic50=0.5uM
    PDBbind: -logKd/Ki=6.30, IC50=0.501uM
    14052 4kip:A (2.27) BS01 1R9 2.7.11.24 GO:0000077 ... Q16539 23746475 MOAD: ic50=7nM
    PDBbind: -logKd/Ki=8.15, IC50=7nM
    BindingDB: IC50=7.0nM
    14053 4kiq:A (2.5) BS01 1RA 2.7.11.24 GO:0000077 ... Q16539 23746475 MOAD: ic50=23nM
    PDBbind: -logKd/Ki=7.64, IC50=23nM
    BindingDB: IC50=23nM
    14054 4kis:A (3.2) BS01 dna ? GO:0000150 ... Q928V6 23821671 PDBbind: Kd~20nM
    14055 4kis:A (3.2) BS02 dna ? GO:0000150 ... Q928V6 23821671 PDBbind: Kd~20nM
    14056 4kis:B (3.2) BS01 dna ? GO:0000150 ... Q928V6 23821671 PDBbind: Kd~20nM
    14057 4kis:B (3.2) BS02 dna ? GO:0000150 ... Q928V6 23821671 PDBbind: Kd~20nM
    14058 4kis:C (3.2) BS01 dna ? GO:0000150 ... Q928V6 23821671 PDBbind: Kd~20nM
    14059 4kis:C (3.2) BS02 dna ? GO:0000150 ... Q928V6 23821671 PDBbind: Kd~20nM
    14060 4kis:D (3.2) BS01 dna ? GO:0000150 ... Q928V6 23821671 PDBbind: Kd~20nM
    14061 4kis:D (3.2) BS02 dna ? GO:0000150 ... Q928V6 23821671 PDBbind: Kd~20nM
    14062 4kiu:A (2.4) BS01 KIU 4.2.1.10 GO:0003855 ... P9WPX7 25234229 PDBbind: -logKd/Ki=3.85, Ki=140uM
    14063 4kiu:L (2.4) BS01 KIU 4.2.1.10 GO:0003855 ... P9WPX7 25234229 PDBbind: -logKd/Ki=3.85, Ki=140uM
    14064 4kiw:A (2.57) BS01 KIW 4.2.1.10 GO:0003855 ... P9WPX7 25234229 PDBbind: -logKd/Ki=5.12, Ki=7.5uM
    14065 4kiw:L (2.57) BS01 KIW 4.2.1.10 GO:0003855 ... P9WPX7 25234229 PDBbind: -logKd/Ki=5.12, Ki=7.5uM
    14066 4kji:A (3.2) BS01 rna ? GO:0003723 ... A0A0H2ZIZ8 23954502 PDBbind: Kd=276nM
    14067 4kji:B (3.2) BS01 rna ? GO:0003723 ... A0A0H2ZIZ8 23954502 PDBbind: Kd=276nM
    14068 4kju:A (1.6) BS02 1RH 2.3.2.27 GO:0043027 ... P98170 24093940 MOAD: ic50=0.006uM
    PDBbind: -logKd/Ki=8.22, IC50=6nM
    BindingDB: IC50=6.0nM
    14069 4kjv:A (1.7) BS02 1RK 2.3.2.27 GO:0043027 ... P98170 24093940 MOAD: ic50=0.018uM
    PDBbind: -logKd/Ki=7.74, IC50=18nM
    BindingDB: IC50=18nM
    14070 4klb:A (2.62) BS01 1RV 3.4.22.51 GO:0006508 ... P25779 23991231 PDBbind: -logKd/Ki=4.16, IC50=68.5uM
    14071 4kln:A (2.62) BS01 AGS 3.6.4.6 GO:0005524 ... P55072 24196964 PDBbind: -logKd/Ki=7.70, Kd=0.02uM
    14072 4kln:A (2.62) BS02 AGS 3.6.4.6 GO:0005524 ... P55072 24196964 PDBbind: -logKd/Ki=7.70, Kd=0.02uM
    14073 4kln:B (2.62) BS01 AGS 3.6.4.6 GO:0005524 ... P55072 24196964 PDBbind: -logKd/Ki=7.70, Kd=0.02uM
    14074 4kln:B (2.62) BS02 AGS 3.6.4.6 GO:0005524 ... P55072 24196964 PDBbind: -logKd/Ki=7.70, Kd=0.02uM
    14075 4klv:A (1.3) BS01 KLV ? GO:0016747 ... Q9HV14 24003232 MOAD: Kd=165.3uM
    PDBbind: -logKd/Ki=3.78, Kd=165.3uM
    14076 4km0:A (1.3) BS01 CP6 1.5.1.3 GO:0004146 ... P9WNX1 24210757 MOAD: Kd=0.91uM
    PDBbind: -logKd/Ki=6.04, Kd=0.91uM
    14077 4km2:A (1.4) BS02 TOP 1.5.1.3 GO:0004146 ... P9WNX1 24210757 MOAD: Kd=1.43uM
    PDBbind: -logKd/Ki=5.84, Kd=1.43uM
    BindingDB: IC50=88000nM
    14078 4kmu:C (3.85) BS01 RFP 2.7.7.6 GO:0000345 ... P0A8V2 23679862 PDBbind: -logKd/Ki=7.92, IC50=12nM
    14079 4kmz:A (2.3) BS01 FOL ? N/A P14207 23934049 MOAD: Kd=2.7nM
    PDBbind: -logKd/Ki=8.57, Kd=2.7nM
    14080 4kn0:A (2.1) BS01 MTX ? N/A P14207 23934049 MOAD: Kd=40nM
    PDBbind: -logKd/Ki=7.40, Kd=40nM
    BindingDB: IC50=106nM
    14081 4kn1:A (2.301) BS01 04J ? N/A P14207 23934049 MOAD: Kd=144nM
    PDBbind: -logKd/Ki=6.84, Kd=144nM
    14082 4kn2:A (2.6) BS01 LYA ? N/A P14207 23934049 PDBbind: -logKd/Ki=7.27, Kd=54nM
    BindingDB: IC50=60nM
    14083 4kn4:C (3.965) BS01 1RL 2.7.7.6 GO:0000345 ... P0A8V2 23679862 PDBbind: -logKd/Ki=7.24, IC50=57nM
    14084 4kn7:C (3.686) BS01 1RM 2.7.7.6 GO:0000345 ... P0A8V2 23679862 PDBbind: -logKd/Ki=7.62, IC50=24nM
    14085 4kn7:X (3.686) BS01 1RM ? GO:0000345 ... P00579 23679862 PDBbind: -logKd/Ki=7.62, IC50=24nM
    14086 4knb:A (2.4) BS01 1RU 2.7.10.1 GO:0004672 ... P08581 23773865 MOAD: ic50=0.047uM
    PDBbind: -logKd/Ki=7.33, IC50=0.047uM
    BindingDB: IC50=47nM
    14087 4kne:A (2.0) BS01 1CY 1.5.1.3 GO:0004146 ... P9WNX1 24210757 MOAD: Kd=1.26uM
    PDBbind: -logKd/Ki=5.90, Kd=1.26uM
    14088 4kni:A (1.8) BS02 E1E 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 24103428 MOAD: Kd=16.7nM
    PDBbind: -logKd/Ki=7.78, Kd=16.7nM
    BindingDB: Kd=17nM, Ki=11nM
    14089 4knj:A (2.0) BS02 E1F 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 24103428 MOAD: Kd=11.1nM
    PDBbind: -logKd/Ki=7.95, Kd=11.1nM
    BindingDB: Kd=11nM, kon=390000M-1-s-1, koff=0.0042s-1
    14090 4knm:A (1.9) BS02 E1E 4.2.1.1 GO:0004089 ... Q8N1Q1 24103428 MOAD: Kd=10nM
    PDBbind: -logKd/Ki=8.00, Kd=10.0nM
    BindingDB: Kd=8.1nM
    14091 4knn:B (1.404) BS02 E1F 4.2.1.1 GO:0004089 ... Q8N1Q1 24103428 MOAD: Kd=16.7nM
    PDBbind: -logKd/Ki=7.78, Kd=16.7nM
    BindingDB: Kd=5.6nM, koff=0.0046s-1, kon=720000M-1-s-1
    14092 4knr:A (2.1) BS01 1S8 2.3.1.157
    2.7.7.23    		 GO:0000287 ... P43889 25262942 MOAD: ic50=1.8uM
    PDBbind: -logKd/Ki=5.74, IC50=1.8uM
    14093 4knx:A (1.9) BS01 1S9 2.3.1.157
    2.7.7.23    		 GO:0000287 ... P43889 25262942 MOAD: ic50=3.2uM
    PDBbind: -logKd/Ki=5.49, IC50=3.2uM
    14094 4ko8:A (1.98) BS01 AGS 3.6.4.6 GO:0005524 ... P55072 24196964 PDBbind: -logKd/Ki=7.15, Kd=0.07uM
    14095 4ko8:B (1.98) BS01 AGS 3.6.4.6 GO:0005524 ... P55072 24196964 PDBbind: -logKd/Ki=7.15, Kd=0.07uM
    14096 4ko8:B (1.98) BS02 AGS 3.6.4.6 GO:0005524 ... P55072 24196964 PDBbind: -logKd/Ki=7.15, Kd=0.07uM
    14097 4kod:A (2.96) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 24196964 PDBbind: -logKd/Ki=5.36, Kd=4.37uM
    14098 4kod:E (2.96) BS01 ADP 3.6.4.6 GO:0005524 ... P55072 24196964 PDBbind: -logKd/Ki=5.36, Kd=4.37uM
    14099 4kom:A (2.604) BS01 SIA ? GO:0005886 ... V5IRU4 24009358 PDBbind: -logKd/Ki=7.00, Kd=0.10uM
    14100 4kon:A (2.6) BS01 SIA ? GO:0005886 ... V5IRU4 24009358 PDBbind: -logKd/Ki=6.48, Kd=0.33uM
    14101 4kot:A (1.55) BS01 CE3 ? GO:0016747 ... Q9HV14 24003232 MOAD: Kd=3.5uM
    PDBbind: -logKd/Ki=5.46, Kd=3.5uM
    14102 4kov:A (1.6) BS01 KOV ? GO:0016747 ... Q9HV14 24003232 MOAD: Kd=176.7uM
    PDBbind: -logKd/Ki=3.75, Kd=176.7uM
    14103 4kow:A (1.45) BS01 CFX ? GO:0016747 ... Q9HV14 24003232 MOAD: Kd=49.3uM
    PDBbind: -logKd/Ki=4.31, Kd=49.3uM
    BindingDB: Kd=4.93e+4nM
    14104 4kox:A (1.8) BS01 CLS ? GO:0016747 ... Q9HV14 24003232 MOAD: Kd=16.9uM
    PDBbind: -logKd/Ki=4.77, Kd=16.9uM
    BindingDB: Kd=1.69e+4nM
    14105 4kp0:A (2.8) BS01 KPK 3.4.21.39 GO:0002003 ... P23946 24121339 PDBbind: -logKd/Ki=8.65, Ki=2.24nM
    BindingDB: IC50=22nM
    14106 4kp4:A (3.0) BS01 ANP 2.7.13.3 GO:0000155 ... P0AEJ4
    Q9WZV7    		 24500224 PDBbind: -logKd/Ki=5.17, Kd=6.8uM
    14107 4kp5:A (1.45) BS02 E1F 4.2.1.1 GO:0004089 ... O43570 24103428 MOAD: Kd=833nM
    PDBbind: -logKd/Ki=6.08, Kd=833nM
    BindingDB: koff=0.31s-1, Kd=833nM, kon=1600000M-1-s-1
    14108 4kp6:A (1.5) BS01 1S1 3.1.4.53 GO:0004114 ... Q07343 23806553 MOAD: ic50=0.87nM
    PDBbind: -logKd/Ki=9.09, IC50=0.81nM
    14109 4kp8:A (1.8) BS02 E1G 4.2.1.1 GO:0004089 ... O43570 24103428 MOAD: Kd=3330nM
    PDBbind: -logKd/Ki=5.48, Kd=3330nM
    BindingDB: Kd=1300nM
    14110 4kpx:A (2.21) BS01 1SE 2.3.1.157
    2.7.7.23    		 GO:0000287 ... P43889 25262942 MOAD: ic50=0.05uM
    PDBbind: -logKd/Ki=7.30, IC50=0.05uM
    14111 4kpz:A (2.09) BS01 1SF 2.3.1.157
    2.7.7.23    		 GO:0000287 ... P43889 25262942 PDBbind: -logKd/Ki=2.71, IC50=1950uM
    14112 4kql:A (2.31) BS01 1SG 2.3.1.157
    2.7.7.23    		 GO:0000287 ... P43889 25262942 MOAD: ic50=0.0017uM
    PDBbind: -logKd/Ki=8.77, IC50=0.0017uM
    14113 4kqo:A (2.31) BS01 JPP 3.4.16.4 GO:0000917 ... G3XD46 23899657 PDBbind: -logKd/Ki=6.78, IC50=166nM
    14114 4kqp:A (0.95) BS01 GLN ? GO:0015276 ... Q9CES5 23994008 MOAD: Kd=0.9uM
    PDBbind: -logKd/Ki=6.05, Kd=0.9uM
    14115 4kqq:A (2.1) BS01 VPP 3.4.16.4 GO:0000917 ... G3XD46 23899657 MOAD: ic50=126uM
    PDBbind: -logKd/Ki=3.90, IC50=126uM
    14116 4kqr:A (2.01) BS01 VPP 3.4.16.4 GO:0000917 ... G3XD46 23899657 MOAD: ic50=126uM
    PDBbind: -logKd/Ki=3.90, IC50=126uM
    14117 4krs:A (2.29) BS02 1SX 2.4.2.-
    2.4.2.30    		 GO:0003950 ... O95271 23879431 MOAD: ic50=0.299uM
    PDBbind: -logKd/Ki=6.52, IC50=0.299uM
    14118 4ks1:A (2.2) BS02 2H8 3.2.1.18 GO:0004308 ... Q07599 24129600 MOAD: Ki=1.5nM
    PDBbind: -logKd/Ki=8.82, Ki=1.5nM
    14119 4ks2:A (2.595) BS02 1SJ 3.2.1.18 GO:0004308 ... Q0A480 24129600 PDBbind: -logKd/Ki=9.34, Ki=0.46nM
    14120 4ks3:A (2.6) BS01 1SL 3.2.1.18 GO:0004308 ... Q0A480 24129600 PDBbind: -logKd/Ki=6.37, Ki=430nM
    14121 4ks4:A (2.495) BS01 1SN 3.2.1.18 GO:0004308 ... Q0A480 24129600 MOAD: Ki=72nM
    PDBbind: -logKd/Ki=7.14, Ki=72nM
    14122 4ks5:A (2.699) BS02 1SO 3.2.1.18 GO:0004308 ... Q0A480 24129600 PDBbind: -logKd/Ki=6.89, Ki=130nM
    14123 4ksp:A (2.93) BS01 1SU 2.7.11.1 GO:0004672 ... P15056 23906342 PDBbind: -logKd/Ki=8.80, Kd=1.6nM
    BindingDB: IC50=77nM
    14124 4ksq:A (3.3) BS01 1SW 2.7.11.1 GO:0004672 ... P15056 23906342 PDBbind: -logKd/Ki=7.31, IC50=49nM
    14125 4ksy:A (1.881) BS01 1SY ? GO:0002218 ... Q86WV6 23747010 MOAD: Kd=3.79nM
    PDBbind: -logKd/Ki=8.42, Kd=3.79nM
    14126 4ktc:A (2.3) BS03 1X3 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0006508 ... P26662 23672640 MOAD: ic50=1nM
    PDBbind: -logKd/Ki=9.00, IC50=1nM
    14127 4kud:A (3.203) BS01 dna ? GO:0000500 ... P61830 23934152 PDBbind: Kd=0.04uM
    14128 4kud:A (3.203) BS02 dna ? GO:0000500 ... P61830 23934152 PDBbind: Kd=0.04uM
    14129 4kud:B (3.203) BS01 dna ? GO:0000500 ... P02309 23934152 PDBbind: Kd=0.04uM
    14130 4kud:B (3.203) BS02 dna ? GO:0000500 ... P02309 23934152 PDBbind: Kd=0.04uM
    14131 4kud:C (3.203) BS01 dna ? GO:0000786 ... P04912 23934152 PDBbind: Kd=0.04uM
    14132 4kud:C (3.203) BS02 dna ? GO:0000786 ... P04912 23934152 PDBbind: Kd=0.04uM
    14133 4kud:D (3.203) BS01 dna ? GO:0000122 ... P02293 23934152 PDBbind: Kd=0.04uM
    14134 4kud:D (3.203) BS02 dna ? GO:0000122 ... P02293 23934152 PDBbind: Kd=0.04uM
    14135 4kud:E (3.203) BS01 dna ? GO:0000500 ... P61830 23934152 PDBbind: Kd=0.04uM
    14136 4kud:E (3.203) BS02 dna ? GO:0000500 ... P61830 23934152 PDBbind: Kd=0.04uM
    14137 4kud:F (3.203) BS01 dna ? GO:0000500 ... P02309 23934152 PDBbind: Kd=0.04uM
    14138 4kud:F (3.203) BS02 dna ? GO:0000500 ... P02309 23934152 PDBbind: Kd=0.04uM
    14139 4kud:G (3.203) BS01 dna ? GO:0000786 ... P04912 23934152 PDBbind: Kd=0.04uM
    14140 4kud:G (3.203) BS02 dna ? GO:0000786 ... P04912 23934152 PDBbind: Kd=0.04uM
    14141 4kud:H (3.203) BS01 dna ? GO:0000122 ... P02293 23934152 PDBbind: Kd=0.04uM
    14142 4kud:H (3.203) BS02 dna ? GO:0000122 ... P02293 23934152 PDBbind: Kd=0.04uM
    14143 4kup:A (1.311) BS01 1TZ 3.4.23.22 GO:0004190 ... P11838 24532096 MOAD: Ki=6uM
    PDBbind: -logKd/Ki=5.22, Ki=6uM
    14144 4kup:A (1.311) BS02 1TZ 3.4.23.22 GO:0004190 ... P11838 24532096 MOAD: Ki=6uM
    PDBbind: -logKd/Ki=5.22, Ki=6uM
    14145 4kv9:A (1.93) BS01 GDP ? GO:0000287 ... A0A3Q0KDV9 24464615 MOAD: Kd=0.000146M
    PDBbind: -logKd/Ki=3.84, Kd=146uM
    14146 4kv9:B (1.93) BS01 GDP ? GO:0000287 ... A0A3Q0KDV9 24464615 MOAD: Kd=0.000146M
    PDBbind: -logKd/Ki=3.84, Kd=146uM
    14147 4kva:A (2.14) BS01 GTP ? GO:0000287 ... A0A3Q0KDV9 24464615 MOAD: Kd=0.000115M
    PDBbind: -logKd/Ki=3.94, Kd=115uM
    14148 4kva:A (2.14) BS03 GTP ? GO:0000287 ... A0A3Q0KDV9 24464615 MOAD: Kd=0.000115M
    PDBbind: -logKd/Ki=3.94, Kd=115uM
    14149 4kva:B (2.14) BS01 GTP ? GO:0000287 ... A0A3Q0KDV9 24464615 MOAD: Kd=0.000115M
    PDBbind: -logKd/Ki=3.94, Kd=115uM
    14150 4kvm:E (2.597) BS02 1XE 2.3.1.255 GO:0004596 ... Q9UTI3 23912279 PDBbind: -logKd/Ki=5.05, Ki=8.9uM
    14151 4kwf:A (2.31) BS01 3AK 1.2.1.3 GO:0004029 ... P05091 24444054 MOAD: Ki=15uM
    PDBbind: -logKd/Ki=4.82, Ki=15uM
    BindingDB: Ki=34000nM, IC50=82000nM
    14152 4kwg:A (2.1) BS01 2AK 1.2.1.3 GO:0004029 ... P05091 24444054 MOAD: Ki=1uM
    PDBbind: -logKd/Ki=6.00, Ki=1.0uM
    BindingDB: Ki=1000nM, IC50=2400nM
    14153 4kwo:A (1.32) BS01 1UD 2.4.2.29 GO:0002099 ... P28720 25483606 MOAD: Ki=353nM
    PDBbind: -logKd/Ki=6.45, Ki=353nM
    14154 4kwp:A (1.25) BS01 EXX 2.7.11.1 GO:0004672 ... P68400 24442476 MOAD: Ki=0.04uM
    PDBbind: -logKd/Ki=7.49, IC50=0.032uM
    14155 4kww:A (2.55) BS01 PHT 2.4.2.19 GO:0004514 ... Q15274 24038671 PDBbind: -logKd/Ki=5.55, Ki=2.8uM
    14156 4kww:B (2.55) BS01 PHT 2.4.2.19 GO:0004514 ... Q15274 24038671 PDBbind: -logKd/Ki=5.55, Ki=2.8uM
    14157 4kww:C (2.55) BS01 PHT 2.4.2.19 GO:0004514 ... Q15274 24038671 PDBbind: -logKd/Ki=5.55, Ki=2.8uM
    14158 4kxb:A (2.4) BS02 BES 3.4.11.7 GO:0001525 ... Q07075 23888046 PDBbind: -logKd/Ki=4.12, Ki=75uM
    14159 4kxl:A (1.69) BS01 6C6 3.2.2.- GO:0009159 ... O35820 24260472 MOAD: Kd=0.6uM
    PDBbind: -logKd/Ki=6.22, Kd=0.6uM
    14160 4kxl:A (1.69) BS02 6C6 3.2.2.- GO:0009159 ... O35820 24260472 MOAD: Kd=0.6uM
    PDBbind: -logKd/Ki=6.22, Kd=0.6uM
    14161 4kxl:B (1.69) BS01 6C6 3.2.2.- GO:0009159 ... O35820 24260472 MOAD: Kd=0.6uM
    PDBbind: -logKd/Ki=6.22, Kd=0.6uM
    14162 4kxl:B (1.69) BS02 6C6 3.2.2.- GO:0009159 ... O35820 24260472 MOAD: Kd=0.6uM
    PDBbind: -logKd/Ki=6.22, Kd=0.6uM
    14163 4kxm:A (2.24) BS01 6IA 3.2.2.- GO:0009159 ... O35820 24260472 MOAD: Kd=2.6uM
    PDBbind: -logKd/Ki=5.59, Kd=2.6uM
    14164 4kxm:A (2.24) BS02 6IA 3.2.2.- GO:0009159 ... O35820 24260472 MOAD: Kd=2.6uM
    PDBbind: -logKd/Ki=5.59, Kd=2.6uM
    14165 4kxm:B (2.24) BS01 6IA 3.2.2.- GO:0009159 ... O35820 24260472 MOAD: Kd=2.6uM
    PDBbind: -logKd/Ki=5.59, Kd=2.6uM
    14166 4kxm:B (2.24) BS02 6IA 3.2.2.- GO:0009159 ... O35820 24260472 MOAD: Kd=2.6uM
    PDBbind: -logKd/Ki=5.59, Kd=2.6uM
    14167 4kxn:A (1.9) BS01 6K6 3.2.2.- GO:0009159 ... O35820 24260472 MOAD: Kd=0.8uM
    PDBbind: -logKd/Ki=6.10, Kd=0.8uM
    14168 4kxn:A (1.9) BS02 6K6 3.2.2.- GO:0009159 ... O35820 24260472 MOAD: Kd=0.8uM
    PDBbind: -logKd/Ki=6.10, Kd=0.8uM
    14169 4kxn:B (1.9) BS01 6K6 3.2.2.- GO:0009159 ... O35820 24260472 MOAD: Kd=0.8uM
    PDBbind: -logKd/Ki=6.10, Kd=0.8uM
    14170 4kyh:A (2.5) BS03 ZST 4.4.1.5 GO:0004462 ... Q9CPU0 23857942 PDBbind: -logKd/Ki=5.92, Ki=1.2uM
    14171 4kyk:B (2.0) BS03 IMN 4.4.1.5 GO:0004462 ... Q9CPU0 23857942 MOAD: Ki=18uM
    PDBbind: -logKd/Ki=4.74, Ki=18uM
    14172 4kz0:A (2.87) BS01 1UJ 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 23820386 PDBbind: -logKd/Ki=5.38, IC50=4.2uM
    BindingDB: IC50=4200nM
    14173 4kz3:A (1.67) BS01 1U1 3.5.2.6 GO:0008800 ... P00811 24807704 MOAD: Ki=1.7mM
    PDBbind: -logKd/Ki=2.77, Ki=1.7mM
    14174 4kz4:B (1.42) BS01 4A1 3.5.2.6 GO:0008800 ... P00811 24807704 MOAD: Ki=0.07mM
    PDBbind: -logKd/Ki=4.15, Ki=0.07mM
    14175 4kz5:A (1.35) BS01 1U3 3.5.2.6 GO:0008800 ... P00811 24807704 MOAD: Ki<10mM
    PDBbind: -logKd/Ki=2.00, Ki<10mM
    14176 4kz6:B (1.68) BS01 ZB6 3.5.2.6 GO:0008800 ... P00811 24807704 MOAD: Ki=0.8mM
    PDBbind: -logKd/Ki=3.10, Ki=0.8mM
    14177 4kz7:A (1.43) BS01 1U5 3.5.2.6 GO:0008800 ... P00811 24807704 MOAD: Ki=3.2mM
    PDBbind: -logKd/Ki=2.49, Ki=3.2mM
    14178 4kz8:A (2.282) BS01 1U6 3.5.2.6 GO:0008800 ... P00811 24807704 MOAD: Ki=1.6mM
    PDBbind: -logKd/Ki=2.80, Ki=1.6mM
    14179 4kz8:A (2.282) BS02 1U6 3.5.2.6 GO:0008800 ... P00811 24807704 MOAD: Ki=1.6mM
    PDBbind: -logKd/Ki=2.80, Ki=1.6mM
    14180 4kza:A (1.6) BS01 NZ9 3.5.2.6 GO:0008800 ... P00811 24807704 MOAD: Ki=0.2mM
    PDBbind: -logKd/Ki=3.70, Ki=0.2mM
    14181 4kza:A (1.6) BS02 NZ9 3.5.2.6 GO:0008800 ... P00811 24807704 MOAD: Ki=0.2mM
    PDBbind: -logKd/Ki=3.70, Ki=0.2mM
    14182 4kza:A (1.6) BS03 NZ9 3.5.2.6 GO:0008800 ... P00811 24807704 MOAD: Ki=0.2mM
    PDBbind: -logKd/Ki=3.70, Ki=0.2mM
    14183 4kza:A (1.6) BS04 NZ9 3.5.2.6 GO:0008800 ... P00811 24807704 MOAD: Ki=0.2mM
    PDBbind: -logKd/Ki=3.70, Ki=0.2mM
    14184 4kzb:A (1.37) BS01 NZ2 3.5.2.6 GO:0008800 ... P00811 24807704 MOAD: Ki=1.3mM
    PDBbind: -logKd/Ki=2.89, Ki=1.3mM
    14185 4kzb:A (1.37) BS02 NZ2 3.5.2.6 GO:0008800 ... P00811 24807704 MOAD: Ki=1.3mM
    PDBbind: -logKd/Ki=2.89, Ki=1.3mM
    14186 4kzb:A (1.37) BS04 NZ2 3.5.2.6 GO:0008800 ... P00811 24807704 MOAD: Ki=1.3mM
    PDBbind: -logKd/Ki=2.89, Ki=1.3mM
    14187 4kzc:A (3.25) BS01 1UK 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 23820386 PDBbind: -logKd/Ki=8.09, IC50=8.2nM
    BindingDB: IC50=8.2nM
    14188 4kze:H (2.404) BS01 rna N/A N/A N/A 24952597 PDBbind: Kd=25nM
    14189 4kze:L (2.404) BS01 rna N/A N/A N/A 24952597 PDBbind: Kd=25nM
    14190 4kzl:A (2.0) BS01 20D 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 24116873 PDBbind: -logKd/Ki=6.15, IC50=700nM
    BindingDB: IC50=1100nM
    14191 4kzq:A (2.25) BS01 DFL 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 24116873 PDBbind: -logKd/Ki=6.10, Kd=788nM
    14192 4kzu:A (2.1) BS01 A73 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 24116873 PDBbind: -logKd/Ki=6.50, Ki=313nM
    14193 4l02:A (2.75) BS01 1V2 2.3.1.-
    2.7.1.91    		 GO:0000287 ... Q9NYA1 23845219 PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    BindingDB: IC50=20nM
    14194 4l09:A (2.05) BS01 1UR 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 24116873 PDBbind: -logKd/Ki=6.07, IC50=850nM
    14195 4l0b:A (1.8) BS02 1UT 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 24116873 PDBbind: -logKd/Ki=7.17, IC50=67nM
    14196 4l0i:A (2.3) BS01 1UW 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 24116873 PDBbind: -logKd/Ki=6.57, IC50=272nM
    14197 4l0l:A (2.1) BS01 PFV 3.4.16.4 GO:0000917 ... Q51504 23755848 PDBbind: -logKd/Ki=7.27, IC50=54nM
    14198 4l0s:A (1.9) BS01 1UZ 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 24116873 PDBbind: -logKd/Ki=6.84, IC50=145nM
    14199 4l0t:A (2.1) BS01 1V0 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 24116873 MOAD: ic50=140nM
    PDBbind: -logKd/Ki=7.18, IC50=66nM
    14200 4l0v:A (1.7) BS01 1V1 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 24116873 PDBbind: -logKd/Ki=6.63, IC50=233nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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