Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    12201 4c1h:A (1.1) BS01 X8Z 3.5.2.6 GO:0008270 ... P04190 26482303 PDBbind: -logKd/Ki=4.09, IC50=80.4uM
    12202 4c1m:B (2.0) BS02 NIH 1.11.2.2 GO:0004601 ... P05164 24194519 MOAD: Kd=15.8nM
    PDBbind: -logKd/Ki=7.80, Kd=15.8nM
    BindingDB: Kd=15.8nM, IC50=5.01nM
    12203 4c1m:D (2.0) BS03 NIH 1.11.2.2 GO:0004601 ... P05164 24194519 PDBbind: -logKd/Ki=7.80, Kd=15.8nM
    BindingDB: Kd=15.8nM, IC50=5.01nM
    12204 4c1t:A (2.39) BS01 XYP N/A N/A N/A 24279727 PDBbind: -logKd/Ki=7.15, Kd=70.8nM
    12205 4c1t:A (2.39) BS02 XYP N/A N/A N/A 24279727 PDBbind: -logKd/Ki=7.15, Kd=70.8nM
    12206 4c1t:A (2.39) BS03 XYP N/A N/A N/A 24279727 PDBbind: -logKd/Ki=7.15, Kd=70.8nM
    12207 4c1t:A (2.39) BS04 AHR N/A N/A N/A 24279727 PDBbind: -logKd/Ki=7.15, Kd=70.8nM
    12208 4c1u:A (2.0) BS01 XYP N/A N/A N/A 24279727 PDBbind: -logKd/Ki=7.09, Kd=81nM
    12209 4c1u:A (2.0) BS02 XYP N/A N/A N/A 24279727 PDBbind: -logKd/Ki=7.09, Kd=81nM
    12210 4c1u:A (2.0) BS03 AHR N/A N/A N/A 24279727 PDBbind: -logKd/Ki=7.09, Kd=81nM
    12211 4c1y:A (2.23) BS01 MFB ? GO:0008150 ... Q4WW81 25760594 PDBbind: -logKd/Ki=3.60, Kd=251uM
    12212 4c1y:A (2.23) BS02 MFB ? GO:0008150 ... Q4WW81 25760594 PDBbind: -logKd/Ki=3.60, Kd=251uM
    12213 4c1y:A (2.23) BS03 MFB ? GO:0008150 ... Q4WW81 25760594 PDBbind: -logKd/Ki=3.60, Kd=251uM
    12214 4c2t:A (3.997) BS01 dna 5.6.2.4 GO:0000725 ... Q9RTI9 24143224 PDBbind: Kd=0.36uM
    12215 4c2t:A (3.997) BS02 dna 5.6.2.4 GO:0000725 ... Q9RTI9 24143224 PDBbind: Kd=0.36uM
    12216 4c2t:B (3.997) BS01 dna 5.6.2.4 GO:0000725 ... Q9RTI9 24143224 PDBbind: Kd=0.36uM
    12217 4c2t:B (3.997) BS02 dna 5.6.2.4 GO:0000725 ... Q9RTI9 24143224 PDBbind: Kd=0.36uM
    12218 4c2t:C (3.997) BS01 dna 5.6.2.4 GO:0000725 ... Q9RTI9 24143224 PDBbind: Kd=0.36uM
    12219 4c2t:C (3.997) BS02 dna 5.6.2.4 GO:0000725 ... Q9RTI9 24143224 PDBbind: Kd=0.36uM
    12220 4c2t:D (3.997) BS01 dna 5.6.2.4 GO:0000725 ... Q9RTI9 24143224 PDBbind: Kd=0.36uM
    12221 4c2t:D (3.997) BS02 dna 5.6.2.4 GO:0000725 ... Q9RTI9 24143224 PDBbind: Kd=0.36uM
    12222 4c2v:A (1.49) BS01 YJA 2.7.11.1 GO:0004672 ... Q6DE08 24598913 MOAD: Ki=1nM
    PDBbind: -logKd/Ki=9.00, Ki=1nM
    12223 4c35:A (2.19) BS02 NU3 2.7.11.11 GO:0001669 ... P00517 24072592 MOAD: ic50=0.56uM
    PDBbind: -logKd/Ki=6.25, IC50=0.56uM
    12224 4c36:A (1.98) BS02 ZO9 2.7.11.11 GO:0001669 ... P00517 24072592 MOAD: ic50=19.8nM
    PDBbind: -logKd/Ki=7.70, IC50=19.8nM
    12225 4c37:A (1.7) BS02 Z21 2.7.11.11 GO:0001669 ... P00517 24072592 MOAD: ic50=19.7nM
    PDBbind: -logKd/Ki=7.71, IC50=19.7nM
    12226 4c38:A (1.58) BS02 VUP 2.7.11.11 GO:0001669 ... P00517 24072592 MOAD: ic50=17.4nM
    PDBbind: -logKd/Ki=7.76, IC50=17.4nM
    12227 4c3k:D (3.099) BS01 ADP ? GO:0000166 ... P0A3F4 24519945 PDBbind: -logKd/Ki=4.97, Kd=10.6uM
    12228 4c3k:D (3.099) BS02 ADP ? GO:0000166 ... P0A3F4 24519945 PDBbind: -logKd/Ki=4.97, Kd=10.6uM
    12229 4c3k:E (3.099) BS01 ADP ? GO:0000166 ... P0A3F4 24519945 PDBbind: -logKd/Ki=4.97, Kd=10.6uM
    12230 4c3k:E (3.099) BS02 ADP ? GO:0000166 ... P0A3F4 24519945 PDBbind: -logKd/Ki=4.97, Kd=10.6uM
    12231 4c4e:A (2.6) BS01 4T9 2.7.12.1 GO:0004672 ... P33981 24256217 PDBbind: -logKd/Ki=7.60, IC50=0.025uM
    BindingDB: IC50=25nM
    12232 4c4f:A (2.36) BS01 7CE 2.7.12.1 GO:0004672 ... P33981 24256217 PDBbind: -logKd/Ki=7.59, IC50=0.026uM
    BindingDB: IC50=26nM
    12233 4c4g:A (2.65) BS01 7RO 2.7.12.1 GO:0004672 ... P33981 24256217 PDBbind: -logKd/Ki=8.22, IC50=0.006uM
    BindingDB: IC50=6.0nM
    12234 4c4h:A (2.8) BS01 7RO 2.7.12.1 GO:0004672 ... P33981 24256217 PDBbind: -logKd/Ki=8.22, IC50=6nM
    BindingDB: IC50=6.0nM
    12235 4c4i:A (2.65) BS01 X20 2.7.12.1 GO:0004672 ... P33981 24256217 PDBbind: -logKd/Ki=7.66, IC50=0.022uM
    BindingDB: IC50=5600nM
    12236 4c4j:A (2.5) BS01 X21 2.7.12.1 GO:0004672 ... P33981 24256217 PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3.0nM
    12237 4c4n:A (2.36) BS01 IDS 3.1.-.- GO:0007267 ... Q62226 24062467 PDBbind: -logKd/Ki=6.10, Kd=0.8uM
    12238 4c4n:A (2.36) BS02 SGN 3.1.-.- GO:0007267 ... Q62226 24062467 PDBbind: -logKd/Ki=6.10, Kd=0.8uM
    12239 4c52:A (2.049) BS01 X0D ? GO:0042981 ... Q07817 24456288 MOAD: Kd=2.1uM
    PDBbind: -logKd/Ki=5.68, Kd=2.1uM
    BindingDB: IC50=22000nM
    12240 4c52:B (2.049) BS01 X0D ? GO:0042981 ... Q07817 24456288 MOAD: Kd=2.1uM
    PDBbind: -logKd/Ki=5.68, Kd=2.1uM
    BindingDB: IC50=22000nM
    12241 4c5d:A (2.3) BS01 X0R ? GO:0042981 ... Q07817 24456288 MOAD: Kd=4uM
    PDBbind: -logKd/Ki=5.40, Kd=4.0uM
    BindingDB: IC50=13000nM
    12242 4c5d:B (2.3) BS01 X0R ? GO:0042981 ... Q07817 24456288 MOAD: Kd=4uM
    PDBbind: -logKd/Ki=5.40, Kd=4.0uM
    BindingDB: IC50=13000nM
    12243 4c5w:A (1.7) BS01 NM3 1.14.11.1 GO:0005506 ... O75936 24571165 MOAD: ic50=3.3uM
    PDBbind: -logKd/Ki=5.48, IC50=3.3uM
    12244 4c61:A (2.45) BS01 LMM 2.7.10.2 GO:0004672 ... O60674 24359159 MOAD: ic50=0.004uM
    PDBbind: -logKd/Ki=8.40, IC50=0.004uM
    BindingDB: IC50=4.0nM
    12245 4c66:A (1.87) BS01 H4C ? N/A O60885 24015967 PDBbind: -logKd/Ki=4.10, IC50=79.4uM
    12246 4c68:A (1.38) BS01 EN5 2.3.1.97 GO:0004379 ... A5K1A2 25230674 PDBbind: -logKd/Ki=6.17, IC50=0.68uM
    12247 4c6u:A (2.4) BS01 TLG N/A GO:0016746 ... N/A 24108128 MOAD: Kd=25.6uM
    PDBbind: -logKd/Ki=4.59, Kd=25.6uM
    12248 4c6v:A (2.7) BS01 TLG N/A GO:0016746 ... N/A 24108128 PDBbind: -logKd/Ki=4.59, Kd=25.6uM
    12249 4c6x:A (1.95) BS01 TLM N/A GO:0016746 ... N/A 24108128 MOAD: Ki=175.4uM
    PDBbind: -logKd/Ki=3.76, Ki=175.4uM
    12250 4c6x:B (1.95) BS02 TLM N/A GO:0016746 ... N/A 24108128 MOAD: Ki=175.4uM
    PDBbind: -logKd/Ki=3.76, Ki=175.4uM
    12251 4c6z:A (1.8) BS01 TLE N/A GO:0016746 ... N/A 24108128 MOAD: Ki=357uM
    PDBbind: -logKd/Ki=3.45, Ki=357.0uM
    12252 4c6z:B (1.8) BS01 TLE N/A GO:0016746 ... N/A 24108128 MOAD: Ki=357uM
    PDBbind: -logKd/Ki=3.45, Ki=357.0uM
    12253 4c70:A (1.75) BS01 TLJ N/A GO:0016746 ... N/A 24108128 MOAD: Ki=305uM
    PDBbind: -logKd/Ki=3.52, Ki=305uM
    12254 4c70:B (1.75) BS01 TLJ N/A GO:0016746 ... N/A 24108128 MOAD: Ki=305uM
    PDBbind: -logKd/Ki=3.52, Ki=305uM
    12255 4c71:A (1.8) BS01 7RD N/A GO:0016746 ... N/A 24108128 MOAD: Ki=384uM
    PDBbind: -logKd/Ki=3.42, Ki=384.0uM
    12256 4c71:B (1.8) BS01 7RD N/A GO:0016746 ... N/A 24108128 MOAD: Ki=384uM
    PDBbind: -logKd/Ki=3.42, Ki=384.0uM
    12257 4c72:A (1.5) BS01 TLG N/A GO:0016746 ... N/A 24108128 MOAD: Ki=8.2uM
    PDBbind: -logKd/Ki=5.09, Ki=8.2uM
    12258 4c72:B (1.5) BS01 TLG N/A GO:0016746 ... N/A 24108128 MOAD: Ki=8.2uM
    PDBbind: -logKd/Ki=5.09, Ki=8.2uM
    12259 4c73:A (1.8) BS01 TLH N/A GO:0016746 ... N/A 24108128 MOAD: Ki=12.1uM
    PDBbind: -logKd/Ki=4.92, Kd=12.1uM
    12260 4c73:B (1.8) BS01 TLH N/A GO:0016746 ... N/A 24108128 MOAD: Ki=12.1uM
    PDBbind: -logKd/Ki=4.92, Kd=12.1uM
    12261 4c7o:A (2.6) BS01 rna 3.6.5.4 GO:0003924 ... P0AGD7 24211265 PDBbind: Kd~0.5uM
    12262 4c7o:B (2.6) BS01 rna 3.6.5.4 GO:0005525 ... P10121 24211265 PDBbind: Kd~0.5uM
    12263 4c7o:D (2.6) BS01 rna 3.6.5.4 GO:0005525 ... P10121 24211265 PDBbind: Kd~0.5uM
    12264 4c7t:A (2.05) BS01 5RI 2.7.10.2 GO:0004672 ... Q00944 24657306 MOAD: ic50=0.4uM
    PDBbind: -logKd/Ki=6.40, IC50=0.4uM
    12265 4c8r:A (2.82) BS02 6YT 1.14.11.1 GO:0005506 ... O75936 26682037 PDBbind: -logKd/Ki=6.82, IC50=153nM
    12266 4c8z:A (2.503) BS01 rna ? GO:0004519 ... Q5SM65 24150936 PDBbind: Kd=90pM
    12267 4c8z:B (2.503) BS01 rna ? GO:0004519 ... Q5SM65 24150936 PDBbind: Kd=90pM
    12268 4c94:A (3.0) BS01 KXN ? GO:0004864 ... D0E0C7 24133217 PDBbind: -logKd/Ki=5.05, Kd=8.9uM
    12269 4c9d:A (3.0) BS01 rna ? GO:0004519 ... Q53VU8 24150936 PDBbind: Kd=3.9nM
    12270 4c9d:A (3.0) BS02 rna ? GO:0004519 ... Q53VU8 24150936 PDBbind: Kd=3.9nM
    12271 4c9d:B (3.0) BS01 rna ? GO:0004519 ... Q53VU8 24150936 PDBbind: Kd=3.9nM
    12272 4c9d:B (3.0) BS02 rna ? GO:0004519 ... Q53VU8 24150936 PDBbind: Kd=3.9nM
    12273 4c9w:A (1.65) BS01 VGH 3.6.1.-
    3.6.1.56    		 GO:0001669 ... P36639 24695225 MOAD: Kd=781nM
    PDBbind: -logKd/Ki=6.11, Kd=781nM
    12274 4c9x:A (1.2) BS01 VHS 3.6.1.-
    3.6.1.56    		 GO:0001669 ... P36639 24695225 MOAD: Kd=48nM
    PDBbind: -logKd/Ki=7.32, Kd=48nM
    BindingDB: IC50=330nM
    12275 4ca4:A (2.84) BS01 KGM ? GO:0007155 ... A2IC68 28250938 PDBbind: -logKd/Ki=7.18, Kd=65.5nM
    12276 4ca5:A (1.85) BS03 3EF 3.4.15.1 GO:0006508 ... P12821 24289879 MOAD: Ki=0.41nM
    PDBbind: -logKd/Ki=9.39, Ki=0.41nM
    BindingDB: Ki=0.41nM
    12277 4ca6:A (1.91) BS02 3EF 3.4.15.1 GO:0006508 ... P12821 24289879 MOAD: Ki=180nM
    PDBbind: -logKd/Ki=6.74, Ki=180nM
    BindingDB: Ki=0.41nM
    12278 4ca7:A (1.82) BS02 3EF 3.4.15.1 GO:0006508 ... Q10714 24289879 MOAD: Ki=24nM
    PDBbind: -logKd/Ki=7.36, Ki=44nM
    12279 4ca8:A (1.99) BS01 3ES 3.4.15.1 GO:0006508 ... Q10714 24289879 MOAD: Ki=120nM
    PDBbind: -logKd/Ki=6.68, Ki=210nM
    12280 4cae:A (1.46) BS02 3F3 2.3.1.97 GO:0004379 ... A5K1A2 24641010 MOAD: Ki=18nM
    PDBbind: -logKd/Ki=7.74, Ki=18nM
    12281 4caf:A (1.7) BS01 370 2.3.1.97 GO:0004379 ... A5K1A2 24641010 MOAD: Ki=75nM
    PDBbind: -logKd/Ki=7.12, Ki=75nM
    12282 4cbt:A (3.03) BS01 9F4 3.5.1.98 N/A P56524 24261862 PDBbind: -logKd/Ki=7.30, IC50=0.05uM
    BindingDB: IC50=60.0nM
    12283 4cby:A (2.72) BS01 KEE 3.5.1.98 N/A P56524 24261862 PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    BindingDB: IC50=20.0nM
    12284 4cc5:A (1.88) BS01 L5V 6.5.1.2 GO:0003911 ... Q9AIU7 24900632 MOAD: Kd=38uM
    PDBbind: -logKd/Ki=4.42, Kd=38uM
    12285 4cc6:A (2.01) BS01 L5Y 6.5.1.2 GO:0003911 ... Q9AIU7 24900632 MOAD: ic50=0.23uM
    PDBbind: -logKd/Ki=6.64, IC50=0.23uM
    BindingDB: IC50=230nM
    12286 4ccd:A (1.97) BS01 2DG 3.2.1.46 GO:0004336 ... P54818 24297913 PDBbind: -logKd/Ki=4.49, Ki=32uM
    12287 4cd0:A (2.23) BS01 AWJ 2.7.10.1 GO:0004672 ... Q9UM73 24432909 MOAD: Ki=0.2nM
    PDBbind: -logKd/Ki=9.70, Ki=0.2nM
    12288 4cd1:A (2.0) BS01 8E9 3.6.1.- GO:0016787 ... O35795 24462745 PDBbind: -logKd/Ki=4.89, Ki=12.8uM
    12289 4cd1:A (2.0) BS02 8E9 3.6.1.- GO:0016787 ... O35795 24462745 PDBbind: -logKd/Ki=4.89, Ki=12.8uM
    12290 4cd4:A (1.2) BS01 BMA 3.2.1.78 GO:0004553 ... B3PGI1 24339341 PDBbind: -logKd/Ki=6.58, Ki=263nM
    12291 4cd4:A (1.2) BS02 IFM 3.2.1.78 GO:0004553 ... B3PGI1 24339341 PDBbind: -logKd/Ki=6.58, Ki=263nM
    12292 4cd5:A (1.1) BS01 BMA 3.2.1.78 GO:0004553 ... B3PGI1 24339341 PDBbind: -logKd/Ki=6.71, Ki=194nM
    12293 4cd5:A (1.1) BS02 MVL 3.2.1.78 GO:0004553 ... B3PGI1 24339341 PDBbind: -logKd/Ki=6.71, Ki=194nM
    12294 4cd6:A (1.64) BS01 IFM 3.2.1.78 N/A A5H1I6 24339341 PDBbind: -logKd/Ki=3.59, Ki=0.26mM
    12295 4cd6:A (1.64) BS02 BMA 3.2.1.78 N/A A5H1I6 24339341 PDBbind: -logKd/Ki=3.59, Ki=0.26mM
    12296 4cd8:A (1.47) BS01 MVL 3.2.1.78 N/A A5H1I6 24339341 PDBbind: -logKd/Ki=2.89, Ki=1.3mM
    12297 4cd8:A (1.47) BS02 BMA 3.2.1.78 N/A A5H1I6 24339341 PDBbind: -logKd/Ki=2.89, Ki=1.3mM
    12298 4ce1:A (2.01) BS01 7FK ? GO:0005524 ... P02829 24435512 PDBbind: -logKd/Ki=4.38, Kd=41.8uM
    12299 4ce2:A (2.38) BS01 BO5 ? GO:0005524 ... P02829 24435512 PDBbind: -logKd/Ki=3.84, Kd=144uM
    12300 4ce3:A (2.31) BS01 L4V ? GO:0005524 ... P02829 24435512 PDBbind: -logKd/Ki=3.96, Kd=110uM
    12301 4ceb:A (1.75) BS01 ZSV 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 PDBbind: -logKd/Ki=2.97, Kd=1080uM
    12302 4ceb:A (1.75) BS02 ZSV 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 PDBbind: -logKd/Ki=2.97, Kd=1080uM
    12303 4ceb:B (1.75) BS01 ZSV 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 MOAD: Kd=1080uM
    PDBbind: -logKd/Ki=2.97, Kd=1080uM
    12304 4ceb:B (1.75) BS02 ZSV 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 MOAD: Kd=1080uM
    PDBbind: -logKd/Ki=2.97, Kd=1080uM
    12305 4cfe:C (3.023) BS02 992 2.7.11.1
    2.7.11.31    		 GO:0003682 ... P54646 24352254 PDBbind: -logKd/Ki=7.22, Kd=0.06uM
    12306 4cfe:D (3.023) BS01 992 ? GO:0004672 ... Q9Y478 24352254 PDBbind: -logKd/Ki=7.22, Kd=0.06uM
    BindingDB: EC50=2.0nM
    12307 4cff:C (3.924) BS02 C1V 2.7.11.1
    2.7.11.31    		 GO:0003682 ... P54646 24352254 PDBbind: -logKd/Ki=6.40, Kd=0.40uM
    12308 4cff:D (3.924) BS01 C1V ? GO:0004672 ... Q9Y478 24352254 PDBbind: -logKd/Ki=6.40, Kd=0.40uM
    BindingDB: Kd=487nM, EC50=390nM
    12309 4cfl:A (1.32) BS01 8DQ ? N/A O60885 24533473 MOAD: Kd=1.33uM
    PDBbind: -logKd/Ki=5.88, Kd=1.33uM
    BindingDB: IC50=9050nM
    12310 4cfm:A (2.85) BS01 4QE 2.7.11.22 GO:0000082 ... P24941 24304238 PDBbind: -logKd/Ki=4.74, IC50=18.2uM
    BindingDB: IC50=18200nM
    12311 4cft:A (1.79) BS03 M48 1.14.13.39 GO:0004517 ... P29473 24472039 MOAD: Ki=11.16uM
    PDBbind: -logKd/Ki=4.95, Ki=11.16uM
    BindingDB: Ki=11160nM
    12312 4cft:B (1.79) BS05 M48 1.14.13.39 GO:0004517 ... P29473 24472039 MOAD: Ki=11.16uM
    PDBbind: -logKd/Ki=4.95, Ki=11.16uM
    BindingDB: Ki=11160nM
    12313 4cfu:A (2.2) BS01 2WC 2.7.11.22 GO:0000082 ... P24941 24304238 PDBbind: -logKd/Ki=4.00, IC50>100uM
    12314 4cfv:C (2.0) BS01 75X 2.7.11.22 GO:0000082 ... P24941 24304238 MOAD: ic50=23.5uM
    PDBbind: -logKd/Ki=4.63, IC50=23.6uM
    12315 4cfw:C (2.45) BS01 SQ9 2.7.11.22 GO:0000082 ... P24941 24304238 MOAD: ic50=0.51uM
    PDBbind: -logKd/Ki=6.29, IC50=0.51uM
    12316 4cfx:C (3.5) BS01 G6T 2.7.11.22 GO:0000082 ... P24941 24304238 PDBbind: -logKd/Ki=5.06, IC50=8.7uM
    12317 4cg8:A (1.75) BS01 G8S 2.7.1.32
    2.7.1.82    		 N/A P35790 24387243 MOAD: Kd=0.11uM
    PDBbind: -logKd/Ki=6.96, Kd=0.11uM
    12318 4cg9:A (1.83) BS01 GQG 2.7.1.32
    2.7.1.82    		 N/A P35790 24387243 PDBbind: -logKd/Ki=6.21, Kd=0.62uM
    12319 4cga:A (1.74) BS01 QLW 2.7.1.32
    2.7.1.82    		 N/A P35790 24387243 PDBbind: -logKd/Ki=6.40, Kd=0.4uM
    12320 4cgi:A (2.07) BS01 NZL 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 MOAD: Kd=752uM
    PDBbind: -logKd/Ki=3.12, Kd=752uM
    12321 4cgi:A (2.07) BS02 NZL 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 MOAD: Kd=752uM
    PDBbind: -logKd/Ki=3.12, Kd=752uM
    12322 4cgi:B (2.07) BS01 NZL 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 MOAD: Kd=752uM
    PDBbind: -logKd/Ki=3.12, Kd=752uM
    12323 4cgi:B (2.07) BS02 NZL 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 MOAD: Kd=752uM
    PDBbind: -logKd/Ki=3.12, Kd=752uM
    12324 4cgj:A (2.15) BS01 NZL 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 PDBbind: -logKd/Ki=2.84, Kd=1460uM
    12325 4cgj:A (2.15) BS02 NZL 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 PDBbind: -logKd/Ki=2.84, Kd=1460uM
    12326 4cgj:B (2.15) BS01 NZL 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 PDBbind: -logKd/Ki=2.84, Kd=1460uM
    12327 4cgj:B (2.15) BS02 NZL 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 PDBbind: -logKd/Ki=2.84, Kd=1460uM
    12328 4ch1:A (-1.00) BS01 dna ? GO:0003676 ... H2L051 25183497 PDBbind: Kd=249nM
    12329 4chu:A (2.489) BS01 dna ? GO:0003677 ... C3SZN7 24847070 PDBbind: Kd=180nM
    12330 4chu:A (2.489) BS02 dna ? GO:0003677 ... C3SZN7 24847070 PDBbind: Kd=180nM
    12331 4chu:B (2.489) BS01 dna ? GO:0003677 ... C3SZN7 24847070 PDBbind: Kd=180nM
    12332 4chu:B (2.489) BS02 dna ? GO:0003677 ... C3SZN7 24847070 PDBbind: Kd=180nM
    12333 4ci1:B (2.98) BS02 EF2 ? GO:0005634 ... P0CF65 25043012 PDBbind: -logKd/Ki=6.60, Kd=249.2nM
    12334 4ci2:B (2.95) BS02 LVY ? GO:0005634 ... P0CF65 25043012 PDBbind: -logKd/Ki=6.75, Kd=177.8nM
    12335 4ci3:B (3.5) BS02 Y70 ? GO:0005634 ... P0CF65 25043012 PDBbind: -logKd/Ki=6.81, Kd=156.6nM
    12336 4cig:A (1.7) BS01 X0P 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 MOAD: Kd=214uM
    PDBbind: -logKd/Ki=3.67, Kd=214uM
    12337 4cig:A (1.7) BS02 X0P 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 MOAD: Kd=214uM
    PDBbind: -logKd/Ki=3.67, Kd=214uM
    12338 4cig:B (1.7) BS01 X0P 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 MOAD: Kd=214uM
    PDBbind: -logKd/Ki=3.67, Kd=214uM
    12339 4cig:B (1.7) BS02 X0P 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 MOAD: Kd=214uM
    PDBbind: -logKd/Ki=3.67, Kd=214uM
    12340 4cik:A (1.78) BS01 XO3 3.4.21.7 N/A P00747 24900876 PDBbind: -logKd/Ki=6.43, IC50=0.37uM
    BindingDB: IC50=950nM
    12341 4cio:A (-1.00) BS01 rna ? GO:0003676 ... O45189 25183497 PDBbind: Kd=1nM
    12342 4civ:A (2.9) BS01 48P 4.2.1.10 GO:0003855 ... P9WPX7 24689821 PDBbind: -logKd/Ki=4.95, Ki=11.2uM
    12343 4ciw:A (2.2) BS01 XH2 4.2.1.10 GO:0003855 ... P9WPX7 24689821 MOAD: Ki=15uM
    PDBbind: -logKd/Ki=4.82, Ki=15.0uM
    12344 4cix:A (2.9) BS01 W4N 4.2.1.10 GO:0003855 ... P9WPX7 24689821 PDBbind: -logKd/Ki=4.47, Ki=34.0uM
    12345 4ciy:A (2.1) BS01 NDY 4.2.1.10 GO:0003855 ... P9WPX7 24689821 MOAD: Ki=27uM
    PDBbind: -logKd/Ki=4.57, Ki=27.0uM
    12346 4ciz:A (3.403) BS01 RET ? GO:0005502 ... P12271 24328211 PDBbind: -logKd/Ki=7.29, Kd~51nM
    12347 4cj4:A (1.8) BS01 S3G 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 MOAD: Kd=432uM
    PDBbind: -logKd/Ki=3.36, Kd=432uM
    12348 4cj4:A (1.8) BS02 S3G 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 MOAD: Kd=432uM
    PDBbind: -logKd/Ki=3.36, Kd=432uM
    12349 4cj4:B (1.8) BS01 S3G 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 MOAD: Kd=432uM
    PDBbind: -logKd/Ki=3.36, Kd=432uM
    12350 4cj4:B (1.8) BS02 S3G 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 MOAD: Kd=432uM
    PDBbind: -logKd/Ki=3.36, Kd=432uM
    12351 4cja:A (2.651) BS01 dna N/A N/A N/A 25004980 PDBbind: Kd=25nM
    12352 4cja:A (2.651) BS02 dna N/A N/A N/A 25004980 PDBbind: Kd=25nM
    12353 4cjn:B (1.947) BS01 QNZ 3.4.16.4 GO:0008658 ... A0A0J9X1X5 25629446 MOAD: Kd=17.5uM
    PDBbind: -logKd/Ki=4.76, Kd=17.54uM
    12354 4cjp:A (2.0) BS01 4D2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 PDBbind: -logKd/Ki=3.32, Kd=481uM
    12355 4cjp:B (2.0) BS01 4D2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 PDBbind: -logKd/Ki=3.32, Kd=481uM
    12356 4cjp:B (2.0) BS02 4D2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 PDBbind: -logKd/Ki=3.32, Kd=481uM
    12357 4cjq:A (1.7) BS01 VXO 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 MOAD: Kd=256uM
    PDBbind: -logKd/Ki=3.59, Kd=256uM
    12358 4cjq:B (1.7) BS01 VXO 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 MOAD: Kd=256uM
    PDBbind: -logKd/Ki=3.59, Kd=256uM
    12359 4cjq:B (1.7) BS02 VXO 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 MOAD: Kd=256uM
    PDBbind: -logKd/Ki=3.59, Kd=256uM
    12360 4cjr:A (1.8) BS01 FYM 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 MOAD: Kd=793uM
    PDBbind: -logKd/Ki=3.10, Kd=793uM
    12361 4cjr:A (1.8) BS02 FYM 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 MOAD: Kd=793uM
    PDBbind: -logKd/Ki=3.10, Kd=793uM
    12362 4cjr:B (1.8) BS01 FYM 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 MOAD: Kd=793uM
    PDBbind: -logKd/Ki=3.10, Kd=793uM
    12363 4cjr:B (1.8) BS02 FYM 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 MOAD: Kd=793uM
    PDBbind: -logKd/Ki=3.10, Kd=793uM
    12364 4ck3:A (1.79) BS01 K1T 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 MOAD: Kd=268uM
    PDBbind: -logKd/Ki=3.57, Kd=268uM
    12365 4ck3:A (1.79) BS02 K1T 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 MOAD: Kd=268uM
    PDBbind: -logKd/Ki=3.57, Kd=268uM
    12366 4ck3:B (1.79) BS01 K1T 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 MOAD: Kd=268uM
    PDBbind: -logKd/Ki=3.57, Kd=268uM
    12367 4ck3:B (1.79) BS02 K1T 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 24532034 MOAD: Kd=268uM
    PDBbind: -logKd/Ki=3.57, Kd=268uM
    12368 4cki:A (2.116) BS01 ADN 2.7.10.1 GO:0004672 ... P07949 24560924 PDBbind: -logKd/Ki=5.96, Kd=1.1uM
    12369 4ckj:A (1.65) BS01 ADN 2.7.10.1 GO:0004672 ... P07949 24560924 PDBbind: -logKd/Ki=4.84, Kd=14.3uM
    12370 4ckr:A (2.2) BS01 DI1 2.7.10.1 GO:0004672 ... Q08345 23899692 MOAD: ic50=105nM
    PDBbind: -logKd/Ki=6.98, IC50=105nM
    BindingDB: IC50=105nM, EC50=86nM
    12371 4cku:A (1.85) BS01 P2F 3.4.23.39 GO:0004190 ... P46925 24900843 MOAD: ic50=0.15uM
    PDBbind: -logKd/Ki=6.82, IC50=0.15uM
    BindingDB: IC50=150nM
    12372 4cku:B (1.85) BS01 P2F 3.4.23.39 GO:0004190 ... P46925 24900843 MOAD: ic50=0.15uM
    PDBbind: -logKd/Ki=6.82, IC50=0.15uM
    BindingDB: IC50=150nM
    12373 4cku:F (1.85) BS01 P2F 3.4.23.39 GO:0004190 ... P46925 24900843 MOAD: ic50=0.15uM
    PDBbind: -logKd/Ki=6.82, IC50=0.15uM
    BindingDB: IC50=150nM
    12374 4cl6:A (2.41) BS01 7SB 4.2.1.59
    5.3.3.14    		 GO:0005737 ... O33877 26562505 MOAD: Ka=247000M^-1
    PDBbind: -logKd/Ki=5.39, Kd=4.05uM
    12375 4cl6:A (2.41) BS02 7SB 4.2.1.59
    5.3.3.14    		 GO:0005737 ... O33877 26562505 MOAD: Ka=247000M^-1
    PDBbind: -logKd/Ki=5.39, Kd=4.05uM
    12376 4cl6:B (2.41) BS01 7SB 4.2.1.59
    5.3.3.14    		 GO:0005737 ... O33877 26562505 MOAD: Ka=247000M^-1
    PDBbind: -logKd/Ki=5.39, Kd=4.05uM
    12377 4cl6:B (2.41) BS02 7SB 4.2.1.59
    5.3.3.14    		 GO:0005737 ... O33877 26562505 MOAD: Ka=247000M^-1
    PDBbind: -logKd/Ki=5.39, Kd=4.05uM
    12378 4cl9:A (1.4) BS01 IES ? N/A O60885 N/A PDBbind: -logKd/Ki=7.30, IC50=0.05uM
    12379 4clb:A (1.6) BS01 83T ? N/A O60885 N/A PDBbind: -logKd/Ki=6.55, IC50=0.28uM
    12380 4cli:A (2.05) BS01 5P8 2.7.10.1 GO:0004672 ... Q9UM73 24819116 MOAD: Ki<0.07nM
    PDBbind: -logKd/Ki=8.89, IC50=1.3nM
    12381 4clj:A (1.66) BS01 5P8 2.7.10.1 GO:0004672 ... Q9UM73 24819116 MOAD: Ki=0.7nM
    PDBbind: -logKd/Ki=9.15, Ki=0.70nM
    12382 4clp:A (1.9) BS01 CMP 4.6.1.1 GO:0009190 ... Q96PN6 24567411 MOAD: Kd=54.2mM
    PDBbind: -logKd/Ki=1.27, Kd=54.2mM
    12383 4clp:A (1.9) BS02 CMP 4.6.1.1 GO:0009190 ... Q96PN6 24567411 MOAD: Kd=54.2mM
    PDBbind: -logKd/Ki=1.27, Kd=54.2mM
    12384 4clz:A (1.9) BS01 4DS 4.6.1.1 GO:0009190 ... Q96PN6 24567411 PDBbind: -logKd/Ki=4.37, IC50=43uM
    12385 4clz:A (1.9) BS02 4DS 4.6.1.1 GO:0009190 ... Q96PN6 24567411 PDBbind: -logKd/Ki=4.37, IC50=43uM
    12386 4clz:A (1.9) BS03 4DS 4.6.1.1 GO:0009190 ... Q96PN6 24567411 PDBbind: -logKd/Ki=4.37, IC50=43uM
    12387 4cmo:A (2.05) BS01 YPW 2.7.10.1 GO:0004672 ... Q9UM73 24819116 MOAD: Ki=0.85nM
    PDBbind: -logKd/Ki=9.07, Ki=0.85nM
    BindingDB: Ki=0.850000nM, IC50=16nM
    12388 4cmt:A (1.73) BS01 GWH 2.7.10.1 GO:0004672 ... Q9UM73 24819116 MOAD: Ki<0.2nM
    PDBbind: -logKd/Ki=9.70, Ki<0.2nM
    12389 4cmu:A (1.8) BS01 IV7 2.7.10.1 GO:0004672 ... Q9UM73 24819116 MOAD: Ki<0.2nM
    PDBbind: -logKd/Ki=9.70, Ki<0.2nM
    BindingDB: IC50=0.700000nM, Ki=0.290000nM
    12390 4cn2:C (2.069) BS01 dna ? GO:0003700 ... P19793 25645674 PDBbind: Kd=38nM
    12391 4cn2:C (2.069) BS02 dna ? GO:0003700 ... P19793 25645674 PDBbind: Kd=38nM
    12392 4cn2:D (2.069) BS01 dna ? GO:0003700 ... P19793 25645674 PDBbind: Kd=38nM
    12393 4cn2:D (2.069) BS02 dna ? GO:0003700 ... P19793 25645674 PDBbind: Kd=38nM
    12394 4cn3:A (2.35) BS01 dna ? GO:0003700 ... P19793 25645674 PDBbind: Kd=44nM
    12395 4cn3:A (2.35) BS02 dna ? GO:0003700 ... P19793 25645674 PDBbind: Kd=44nM
    12396 4cn3:B (2.35) BS01 dna ? GO:0003700 ... P19793 25645674 PDBbind: Kd=44nM
    12397 4cn3:B (2.35) BS02 dna ? GO:0003700 ... P19793 25645674 PDBbind: Kd=44nM
    12398 4cn3:C (2.35) BS01 dna ? GO:0003700 ... P19793 25645674 PDBbind: Kd=44nM
    12399 4cn3:C (2.35) BS02 dna ? GO:0003700 ... P19793 25645674 PDBbind: Kd=44nM
    12400 4cn3:D (2.35) BS01 dna ? GO:0003700 ... P19793 25645674 PDBbind: Kd=44nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218