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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    12001 4b77:A (1.8) BS01 54M 3.4.23.46 GO:0004190 ... P56817 23126626 MOAD: ic50=7.9uM
    PDBbind: -logKd/Ki=5.10, IC50=7.9uM
    BindingDB: IC50=7900nM
    12002 4b78:A (1.5) BS01 KGG 3.4.23.46 GO:0004190 ... P56817 23126626 MOAD: ic50=3.2uM
    PDBbind: -logKd/Ki=5.00, IC50=10uM
    BindingDB: IC50=40000nM
    12003 4b7j:A (2.417) BS02 G39 3.2.1.18 GO:0004308 ... F8UU09 23028314 MOAD: Ki=11.1nM
    PDBbind: -logKd/Ki=7.95, Ki=11.1nM
    12004 4b7n:A (2.84) BS01 ZMR 3.2.1.18 GO:0004308 ... F8UU09 23028314 PDBbind: -logKd/Ki=8.78, Ki=1.65nM
    12005 4b7p:A (1.7) BS01 9UN 3.6.4.10 GO:0005524 ... P07900 23674492 MOAD: Kd=0.346nM
    PDBbind: -logKd/Ki=9.46, Kd=0.346nM
    BindingDB: Kd=0.35nM
    12006 4b7q:A (2.728) BS01 ZMR 3.2.1.18 GO:0004308 ... C7FH46 23028314 PDBbind: -logKd/Ki=9.74, Ki=0.18nM
    12007 4b7r:A (1.9) BS03 G39 3.2.1.18 GO:0004308 ... C7FH46 23028314 MOAD: Ki=0.23nM
    PDBbind: -logKd/Ki=9.64, Ki=0.23nM
    12008 4b7z:A (2.3) BS01 Q4Q 3.1.1.7 GO:0001919 ... P21836 23984975 MOAD: ic50=49uM
    PDBbind: -logKd/Ki=4.31, IC50=49uM
    BindingDB: IC50=49000nM
    12009 4b80:A (2.5) BS01 A36 3.1.1.7 GO:0001919 ... P21836 23984975 MOAD: ic50=40uM
    PDBbind: -logKd/Ki=4.40, IC50=40uM
    BindingDB: IC50=40000nM
    12010 4b81:A (2.8) BS01 ZN4 3.1.1.7 GO:0001919 ... P21836 23984975 PDBbind: -logKd/Ki=4.92, IC50=12uM
    BindingDB: IC50=12000nM, Kd=11100nM
    12011 4b82:A (2.1) BS01 B3Z 3.1.1.7 GO:0001919 ... P21836 23984975 MOAD: ic50=41uM
    PDBbind: -logKd/Ki=4.39, IC50=41uM
    BindingDB: IC50=41000nM
    12012 4b83:A (2.4) BS01 B3V 3.1.1.7 GO:0001919 ... P21836 23984975 PDBbind: -logKd/Ki=5.15, IC50=7uM
    BindingDB: IC50=7000nM
    12013 4b83:A (2.4) BS02 B3V 3.1.1.7 GO:0001919 ... P21836 23984975 PDBbind: -logKd/Ki=5.15, IC50=7uM
    BindingDB: IC50=7000nM
    12014 4b84:A (2.6) BS01 Z5K 3.1.1.7 GO:0001919 ... P21836 23984975 PDBbind: -logKd/Ki=4.66, IC50=22uM
    BindingDB: Kd=14800nM, IC50=22000nM
    12015 4b85:A (2.1) BS01 B3W 3.1.1.7 GO:0001919 ... P21836 23984975 MOAD: ic50=88uM
    PDBbind: -logKd/Ki=4.06, IC50=88uM
    BindingDB: IC50=88000nM
    12016 4b95:C (2.8) BS01 UCK ? N/A P40337 23065727 PDBbind: -logKd/Ki=4.28, IC50=52uM
    12017 4b9k:C (2.0) BS01 TG0 ? N/A P40337 23065727 MOAD: Ki=0.67uM
    PDBbind: -logKd/Ki=6.17, Ki=0.67uM
    BindingDB: IC50=900nM
    12018 4bae:A (2.35) BS01 RWX 5.6.2.2 GO:0003677 ... P0C559 24126580 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    12019 4bah:B (1.94) BS03 MEL 3.4.21.5 GO:0004252 ... P00734 23290007 MOAD: Ki=2.01nM
    PDBbind: -logKd/Ki=8.70, Ki=2.01nM
    BindingDB: IC50=69nM, Ki=1.2nM
    12020 4bak:B (1.94) BS03 M67 3.4.21.5 GO:0004252 ... P00734 23290007 MOAD: Ki=1.22nM
    PDBbind: -logKd/Ki=8.91, Ki=1.22nM
    12021 4bam:B (1.88) BS03 MM9 3.4.21.5 GO:0004252 ... P00734 23290007 MOAD: Ki=1.14nM
    PDBbind: -logKd/Ki=8.94, Ki=1.14nM
    12022 4ban:B (1.87) BS03 M6S 3.4.21.5 GO:0004252 ... P00734 23290007 MOAD: Ki=2.43nM
    PDBbind: -logKd/Ki=8.61, Ki=2.43nM
    12023 4bao:B (1.87) BS03 MVF 3.4.21.5 GO:0004252 ... P00734 23290007 MOAD: Ki=4.29nM
    PDBbind: -logKd/Ki=8.37, Ki=4.29nM
    12024 4baq:B (1.89) BS03 M4Z 3.4.21.5 GO:0004252 ... P00734 23290007 MOAD: Ki=0.98nM
    PDBbind: -logKd/Ki=9.01, Ki=0.98nM
    12025 4bb2:A (2.48) BS02 STR ? GO:0004867 ... P08185 23300763 PDBbind: -logKd/Ki=7.07, Kd~85nM
    BindingDB: Ki=42nM
    12026 4bb2:B (2.48) BS01 STR ? N/A P08185 23300763 PDBbind: -logKd/Ki=7.07, Kd~85nM
    BindingDB: Ki=42nM
    12027 4bb4:A (1.65) BS01 32W 2.7.10.1 GO:0004672 ... P54760 23398453 PDBbind: -logKd/Ki=6.72, IC50=190nM
    12028 4bb9:A (1.47) BS01 F1P ? GO:0004857 ... Q14397 23621087 PDBbind: -logKd/Ki=6.00, Kd=1uM
    12029 4bbe:A (1.9) BS01 3O4 2.7.10.2 GO:0004672 ... O60674 23127890 MOAD: ic50=3.6nM
    PDBbind: -logKd/Ki=8.44, IC50=3.6nM
    BindingDB: IC50=974.7nM
    12030 4bbf:A (2.0) BS01 O19 2.7.10.2 GO:0004672 ... O60674 23127890 MOAD: ic50=2.2nM
    PDBbind: -logKd/Ki=8.66, IC50=2.2nM
    BindingDB: IC50=2.2nM
    12031 4bbg:A (2.75) BS02 V02 ? GO:0003777 ... P52732 23394180 PDBbind: -logKd/Ki=8.32, Ki=4.8nM
    BindingDB: Ki=4.8nM
    12032 4bbh:A (1.63) BS02 YBN 2.3.1.97 GO:0004379 ... A5K1A2 23170970 MOAD: Ki=0.08uM
    PDBbind: -logKd/Ki=7.10, Ki=0.08uM
    12033 4bc5:A (1.98) BS01 5FX 2.7.1.17 GO:0004856 ... O75191 23179721 MOAD: Ki=25uM
    PDBbind: -logKd/Ki=4.60, Ki=25uM
    12034 4bcb:A (1.7) BS01 4I4 3.4.21.26 GO:0004252 ... P23687 23121075 PDBbind: -logKd/Ki=8.52, IC50=3.0nM
    12035 4bcc:A (1.65) BS01 JKT 3.4.21.26 GO:0004252 ... P23687 23121075 PDBbind: -logKd/Ki=8.05, IC50=9nM
    12036 4bcd:A (1.5) BS01 TDV 3.4.21.26 GO:0004252 ... P23687 23121075 MOAD: ic50=0.033uM
    PDBbind: -logKd/Ki=7.48, IC50=33nM
    BindingDB: IC50=33nM
    12037 4bcf:A (3.011) BS01 T6Q 2.7.11.22
    2.7.11.23    		 GO:0004672 ... P50750 23252711 PDBbind: -logKd/Ki=8.15, Ki=7nM
    12038 4bcg:A (3.085) BS01 T3C 2.7.11.22
    2.7.11.23    		 GO:0004672 ... P50750 23301767 PDBbind: -logKd/Ki=8.15, Ki=7nM
    12039 4bch:A (2.958) BS01 T7Z 2.7.11.22
    2.7.11.23    		 GO:0004672 ... P50750 23252711 PDBbind: -logKd/Ki=7.66, Ki=22nM
    12040 4bci:A (3.1) BS01 T3E 2.7.11.22
    2.7.11.23    		 GO:0004672 ... P50750 23252711 PDBbind: -logKd/Ki=8.22, Ki=6nM
    12041 4bcj:A (3.162) BS01 T9N 2.7.11.22
    2.7.11.23    		 GO:0004672 ... P50750 23252711 PDBbind: -logKd/Ki=7.96, Ki=11nM
    12042 4bck:A (2.052) BS01 T3E 2.7.11.22 GO:0000082 ... P24941 23252711 MOAD: Ki=0.004uM
    PDBbind: -logKd/Ki=8.40, Ki=4nM
    12043 4bcm:A (2.45) BS01 T7Z 2.7.11.22 GO:0000082 ... P24941 23252711 MOAD: Ki=0.123uM
    PDBbind: -logKd/Ki=6.91, Ki=0.123uM
    12044 4bcn:C (2.1) BS01 T9N 2.7.11.22 GO:0000082 ... P24941 23252711 MOAD: Ki=0.012uM
    PDBbind: -logKd/Ki=7.92, Ki=12nM
    12045 4bco:A (2.05) BS01 T6Q 2.7.11.22 GO:0000082 ... P24941 23252711 MOAD: Ki=0.131uM
    PDBbind: -logKd/Ki=6.88, Ki=0.131uM
    12046 4bcp:A (2.26) BS01 T3C 2.7.11.22 GO:0000082 ... P24941 23301767 MOAD: Ki=568nM
    PDBbind: -logKd/Ki=6.25, Ki=568nM
    12047 4bcq:C (2.4) BS01 TJF 2.7.11.22 GO:0000082 ... P24941 23252711 MOAD: Ki=0.147uM
    PDBbind: -logKd/Ki=6.83, Kd=0.147uM
    BindingDB: Ki=199nM
    12048 4bcs:A (1.8) BS01 BTN ? GO:0005576 ... P56734 24632863 MOAD: Kd=103nM
    PDBbind: -logKd/Ki=6.99, Kd=103nM
    12049 4bcw:A (1.5) BS02 TU0 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 23241068 PDBbind: -logKd/Ki=4.00, Ki>100uM
    12050 4bda:A (2.6) BS01 VFB 2.7.11.1 GO:0004672 ... O96017 23776527 PDBbind: -logKd/Ki=5.57, IC50=2.7uM
    12051 4bdb:A (2.5) BS01 ODO 2.7.11.1 GO:0004672 ... O96017 23776527 MOAD: ic50=85.6uM
    PDBbind: -logKd/Ki=4.07, IC50=85.6uM
    12052 4bdc:A (3.0) BS01 ODH 2.7.11.1 GO:0004672 ... O96017 23776527 PDBbind: -logKd/Ki=4.93, IC50=11.7uM
    12053 4bdd:A (2.67) BS01 Z0O 2.7.11.1 GO:0004672 ... O96017 23776527 PDBbind: -logKd/Ki=4.43, IC50=36.9uM
    12054 4bde:A (2.55) BS01 CWS 2.7.11.1 GO:0004672 ... O96017 23776527 PDBbind: -logKd/Ki=4.80, IC50=15.9uM
    12055 4bdf:A (2.7) BS01 H3R 2.7.11.1 GO:0004672 ... O96017 23776527 PDBbind: -logKd/Ki=4.09, IC50=81.1uM
    12056 4bdg:A (2.84) BS01 P3J 2.7.11.1 GO:0004672 ... O96017 23776527 PDBbind: -logKd/Ki=4.12, IC50=76.2uM
    12057 4bdh:A (2.7) BS01 WVI 2.7.11.1 GO:0004672 ... O96017 23776527 PDBbind: -logKd/Ki=4.11, IC50=76.8uM
    12058 4bdi:A (2.32) BS01 HAU 2.7.11.1 GO:0004672 ... O96017 23776527 MOAD: ic50=227.7uM
    PDBbind: -logKd/Ki=3.64, IC50=227.7uM
    12059 4bdj:A (3.01) BS01 Z2M 2.7.11.1 GO:0004672 ... O96017 23776527 PDBbind: -logKd/Ki=5.14, IC50=7.2uM
    12060 4bdk:A (3.3) BS01 RQQ 2.7.11.1 GO:0004672 ... O96017 23776527 PDBbind: -logKd/Ki=5.44, IC50=3.6uM
    12061 4bds:A (2.1) BS03 THA 3.1.1.8 GO:0001540 ... P06276 23679855 MOAD: Ki=25nM
    PDBbind: -logKd/Ki=7.60, Ki=25nM
    BindingDB: IC50=23nM, Ki=7nM
    12062 4bdt:A (3.104) BS01 HUW 3.1.1.7 GO:0001507 ... P22303 23679855 PDBbind: -logKd/Ki=8.96, IC50=1.1nM
    12063 4bek:A (2.39) BS01 XK0 3.4.23.46 GO:0004190 ... P56817 23735744 MOAD: ic50=41.2uM
    PDBbind: -logKd/Ki=4.39, IC50=41.2uM
    12064 4bf1:A (1.35) BS02 9FK 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 23859774 MOAD: Ki=2.4nM
    PDBbind: -logKd/Ki=8.62, Ki=2.4nM
    BindingDB: Ki=2.4nM
    12065 4bf6:A (1.82) BS02 X0Q 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 23859774 MOAD: Ki=4.5nM
    PDBbind: -logKd/Ki=8.35, Ki=4.5nM
    BindingDB: Ki=4.5nM
    12066 4bfd:A (2.3) BS01 8T3 3.4.23.46 GO:0004190 ... P56817 23735744 MOAD: ic50=0.096uM
    PDBbind: -logKd/Ki=7.02, IC50=96nM
    12067 4bfp:A (2.4) BS01 SWY 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 23762361 PDBbind: -logKd/Ki=7.82, IC50=15nM
    12068 4bfr:A (2.8) BS01 J82 2.7.11.1
    2.7.1.153    		 GO:0016301 ... Q8BTI9 24387221 PDBbind: -logKd/Ki=7.64, IC50=23nM
    12069 4bfy:A (2.3) BS01 ZVY 2.7.1.33 GO:0004594 ... P9WPA7 23661699 MOAD: ic50=0.12uM
    PDBbind: -logKd/Ki=6.92, IC50=0.12uM
    12070 4bfz:A (2.1) BS01 ZVZ 2.7.1.33 GO:0004594 ... P9WPA7 23661699 MOAD: ic50=0.55uM
    PDBbind: -logKd/Ki=6.26, IC50=0.55uM
    12071 4bg1:A (1.89) BS01 IVL 1.14.11.1 GO:0005506 ... O75936 24571165 MOAD: ic50=0.49uM
    PDBbind: -logKd/Ki=6.31, IC50=0.49uM
    12072 4bgg:A (2.56) BS01 844 2.7.11.30 GO:0004672 ... Q04771 25101911 PDBbind: -logKd/Ki=7.82, IC50=15nM
    BindingDB: IC50=15nM
    12073 4bgh:A (1.95) BS01 3I6 2.7.11.22 GO:0000082 ... P24941 23671017 MOAD: ic50=4nM
    PDBbind: -logKd/Ki=8.40, IC50=4nM
    12074 4bgk:A (2.18) BS01 RTK 1.14.11.1 GO:0005506 ... O75936 24571165 MOAD: ic50=0.52uM
    PDBbind: -logKd/Ki=6.28, IC50=520nM
    12075 4bgm:A (2.4) BS01 DLT 1.14.11.1 GO:0005506 ... O75936 24571165 MOAD: ic50=0.61uM
    PDBbind: -logKd/Ki=6.21, IC50=0.61uM
    12076 4bgx:A (2.48) BS01 SIA ? GO:0019031 ... Q6DQ34 23615615 PDBbind: -logKd/Ki=1.77, Kd=17mM
    12077 4bgy:A (2.68) BS01 SIA ? GO:0019031 ... Q6DQ34 23615615 PDBbind: -logKd/Ki=2.96, Kd=1.1mM
    12078 4bh3:A (2.0) BS01 SIA ? GO:0019031 ... Q5EP31 23615615 PDBbind: -logKd/Ki=1.92, Kd=12mM
    12079 4bh4:A (1.9) BS01 SIA ? GO:0019031 ... Q5EP31 23615615 PDBbind: -logKd/Ki=1.49, Kd=32mM
    12080 4bhf:A (2.05) BS01 MZT 1.14.11.1 GO:0005506 ... O75936 24571165 MOAD: Kd=4.1uM
    PDBbind: -logKd/Ki=3.46, IC50=343uM
    12081 4bhi:A (2.15) BS01 RUJ 1.14.11.1 GO:0005506 ... O75936 24571165 MOAD: Kd=9.3uM
    PDBbind: -logKd/Ki=7.05, IC50=90nM
    12082 4bhn:A (2.3) BS01 BH9 2.7.11.25 GO:0004672 ... Q99683 23776076 MOAD: ic50=13nM
    PDBbind: -logKd/Ki=8.20, IC50=6.31nM
    12083 4bhz:A (2.85) BS01 Z0B 2.7.12.1 GO:0004672 ... P33981 23672464 PDBbind: -logKd/Ki=4.27, IC50=53.5uM
    12084 4bi0:A (2.84) BS01 Z0W 2.7.12.1 GO:0004672 ... P33981 23672464 PDBbind: -logKd/Ki=4.23, IC50=58.6uM
    12085 4bi1:A (2.7) BS01 ZO6 2.7.12.1 GO:0004672 ... P33981 23672464 PDBbind: -logKd/Ki=4.16, IC50=69.1uM
    12086 4bi2:A (3.11) BS01 ZO8 2.7.12.1 GO:0004672 ... P33981 23672464 PDBbind: -logKd/Ki=4.03, IC50=94.1uM
    12087 4bi6:A (1.45) BS01 PGA 4.2.3.3
    5.3.1.1    		 GO:0004807 ... P36186 23894402 MOAD: Kd=113.3uM
    PDBbind: -logKd/Ki=3.95, Kd=113.3uM
    12088 4bi7:A (1.6) BS01 PGA 4.2.3.3
    5.3.1.1    		 GO:0004807 ... P36186 23894402 MOAD: Kd=26.4uM
    PDBbind: -logKd/Ki=4.58, Kd=26.4uM
    12089 4bib:A (2.43) BS01 IEO 2.7.11.25 GO:0004672 ... Q99683 23776076 MOAD: ic50=0.63uM
    PDBbind: -logKd/Ki=6.60, IC50=0.25uM
    12090 4bic:A (2.62) BS01 IE4 2.7.11.25 GO:0004672 ... Q99683 23776076 PDBbind: -logKd/Ki=7.30, IC50=50.12nM
    12091 4bid:A (2.8) BS01 IE8 2.7.11.25 GO:0004672 ... Q99683 23776076 PDBbind: -logKd/Ki=8.10, IC50=7.94nM
    12092 4bie:A (2.36) BS01 IE6 2.7.11.25 GO:0004672 ... Q99683 23776076 MOAD: ic50=0.79uM
    PDBbind: -logKd/Ki=6.60, IC50=0.25uM
    12093 4bio:A (2.45) BS02 8XQ 1.14.11.30
    1.14.11.n4    		 GO:0003714 ... Q9NWT6 26682036 PDBbind: -logKd/Ki=5.12, IC50=7.6uM
    12094 4bis:A (2.493) BS02 8HQ 1.14.11.66
    1.14.11.69    		 N/A O75164 26682036 PDBbind: -logKd/Ki=5.85, IC50=1.4uM
    BindingDB: IC50=1700nM
    12095 4bj8:E (2.4) BS01 BTN ? GO:0005576 ... E7F650 24204770 MOAD: Kd=5.13nM
    PDBbind: -logKd/Ki=8.29, Kd=5.13nM
    12096 4bj8:F (2.4) BS01 BTN ? GO:0005576 ... E7F650 24204770 MOAD: Kd=5.13nM
    PDBbind: -logKd/Ki=8.29, Kd=5.13nM
    12097 4bj9:A (2.05) BS02 UHB 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 24900770 MOAD: ic50=45nM
    PDBbind: -logKd/Ki=7.35, IC50=45nM
    12098 4bjb:A (2.3) BS02 P34 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 24900770 MOAD: ic50=219nM
    PDBbind: -logKd/Ki=6.66, IC50=219nM
    BindingDB: IC50=2951nM
    12099 4bjc:A (2.2) BS01 RPB 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 24900770 MOAD: ic50=14nM
    PDBbind: -logKd/Ki=7.85, IC50=14nM
    BindingDB: IC50=890nM
    12100 4bjx:A (1.59) BS01 73B ? N/A O60885 24009722 MOAD: ic50=22nM
    PDBbind: -logKd/Ki=7.66, IC50=22nM
    BindingDB: IC50=0.398107nM, Kd=4.4nM
    12101 4bkj:A (1.7) BS01 STI 2.7.10.1 GO:0004672 ... Q08345 24768818 MOAD: Kd=1.9nM
    PDBbind: -logKd/Ki=8.72, Kd=1.9nM
    BindingDB: IC50=337nM, Kd=0.700000nM
    12102 4bks:C (2.2) BS01 X6C ? N/A P40337 24436777 MOAD: Kd=150uM
    PDBbind: -logKd/Ki=3.82, Kd=150uM
    BindingDB: Kd=150000nM
    12103 4bkt:C (2.35) BS01 QD0 ? N/A P40337 24436777 MOAD: Kd=240uM
    PDBbind: -logKd/Ki=3.62, Kd=240uM
    BindingDB: Kd=240000nM
    12104 4bky:A (1.83) BS01 82B 2.7.10.2
    2.7.11.1    		 GO:0004672 ... Q14680 23914841 MOAD: ic50=0.012uM
    PDBbind: -logKd/Ki=7.92, IC50=0.012uM
    12105 4bkz:A (2.2) BS01 1WS 2.7.10.2
    2.7.11.1    		 GO:0004672 ... Q14680 23914841 MOAD: ic50=0.027uM
    PDBbind: -logKd/Ki=7.57, IC50=0.027uM
    12106 4bnt:B (2.3) BS01 36E 1.1.1.100 GO:0004316 ... O54438 24015914 MOAD: ic50=137.69uM
    PDBbind: -logKd/Ki=3.86, IC50=137.69uM
    12107 4bnu:A (2.0) BS01 9KQ 1.1.1.100 GO:0004316 ... O54438 24015914 PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    12108 4bnu:B (2.0) BS01 9KQ 1.1.1.100 GO:0004316 ... O54438 24015914 MOAD: ic50=0.02uM
    PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    12109 4bnv:A (2.5) BS01 Q7U 1.1.1.100 GO:0004316 ... O54438 24015914 PDBbind: -logKd/Ki=7.52, IC50=0.03uM
    12110 4bnv:B (2.5) BS01 Q7U 1.1.1.100 GO:0004316 ... O54438 24015914 MOAD: ic50=0.03uM
    PDBbind: -logKd/Ki=7.52, IC50=0.03uM
    12111 4bnx:A (2.3) BS01 O74 1.1.1.100 GO:0004316 ... O54438 24015914 MOAD: ic50=0.02uM
    PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    12112 4bnx:B (2.3) BS01 O74 1.1.1.100 GO:0004316 ... O54438 24015914 PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    12113 4bny:A (1.8) BS01 36I 1.1.1.100 GO:0004316 ... O54438 24015914 PDBbind: -logKd/Ki=7.10, Ki=0.08uM
    12114 4bny:B (1.8) BS01 36I 1.1.1.100 GO:0004316 ... O54438 24015914 MOAD: ic50=0.08uM
    PDBbind: -logKd/Ki=7.10, Ki=0.08uM
    12115 4bnz:A (2.5) BS01 8M5 1.1.1.100 GO:0004316 ... O54438 24015914 MOAD: ic50=0.26uM
    PDBbind: -logKd/Ki=6.59, IC50=0.26uM
    12116 4bnz:B (2.5) BS01 8M5 1.1.1.100 GO:0004316 ... O54438 24015914 PDBbind: -logKd/Ki=6.59, IC50=0.26uM
    12117 4bo0:A (2.4) BS01 FXE 1.1.1.100 GO:0004316 ... O54438 24015914 MOAD: ic50=0.2uM
    PDBbind: -logKd/Ki=6.70, IC50=0.20uM
    12118 4bo0:B (2.4) BS01 FXE 1.1.1.100 GO:0004316 ... O54438 24015914 PDBbind: -logKd/Ki=6.70, IC50=0.20uM
    12119 4bo1:A (2.2) BS01 NKH 1.1.1.100 GO:0004316 ... O54438 24015914 PDBbind: -logKd/Ki=7.30, IC50=0.05uM
    12120 4bo1:B (2.2) BS01 NKH 1.1.1.100 GO:0004316 ... O54438 24015914 MOAD: ic50=0.05uM
    PDBbind: -logKd/Ki=7.30, IC50=0.05uM
    12121 4bo2:A (1.9) BS01 36K 1.1.1.100 GO:0004316 ... O54438 24015914 MOAD: ic50=0.05uM
    PDBbind: -logKd/Ki=7.30, IC50=0.05uM
    12122 4bo2:B (1.9) BS01 36K 1.1.1.100 GO:0004316 ... O54438 24015914 PDBbind: -logKd/Ki=7.30, IC50=0.05uM
    12123 4bo3:A (2.5) BS01 U98 1.1.1.100 GO:0004316 ... O54438 24015914 MOAD: ic50=0.3uM
    PDBbind: -logKd/Ki=6.52, IC50=0.30uM
    12124 4bo3:B (2.5) BS01 U98 1.1.1.100 GO:0004316 ... O54438 24015914 PDBbind: -logKd/Ki=6.52, IC50=0.30uM
    12125 4bo4:A (2.7) BS01 36G 1.1.1.100 GO:0004316 ... O54438 24015914 PDBbind: -logKd/Ki=6.89, IC50=0.13uM
    12126 4bo4:B (2.7) BS01 36G 1.1.1.100 GO:0004316 ... O54438 24015914 PDBbind: -logKd/Ki=6.89, IC50=0.13uM
    12127 4bo5:A (2.6) BS01 WI4 1.1.1.100 GO:0004316 ... O54438 24015914 PDBbind: -logKd/Ki=7.10, IC50=0.08uM
    12128 4bo5:B (2.6) BS01 WI4 1.1.1.100 GO:0004316 ... O54438 24015914 PDBbind: -logKd/Ki=7.10, IC50=0.08uM
    12129 4bo6:A (2.8) BS01 36P 1.1.1.100 GO:0004316 ... O54438 24015914 PDBbind: -logKd/Ki=6.74, IC50=0.18uM
    12130 4bo6:B (2.8) BS01 36P 1.1.1.100 GO:0004316 ... O54438 24015914 PDBbind: -logKd/Ki=6.74, IC50=0.18uM
    12131 4bo7:A (2.6) BS01 J2T 1.1.1.100 GO:0004316 ... O54438 24015914 PDBbind: -logKd/Ki=7.00, IC50=0.10uM
    12132 4bo7:B (2.6) BS01 J2T 1.1.1.100 GO:0004316 ... O54438 24015914 PDBbind: -logKd/Ki=7.00, IC50=0.10uM
    12133 4bo8:A (2.7) BS01 34X 1.1.1.100 GO:0004316 ... O54438 24015914 PDBbind: -logKd/Ki=6.92, IC50=0.12uM
    12134 4bo8:B (2.7) BS01 34X 1.1.1.100 GO:0004316 ... O54438 24015914 PDBbind: -logKd/Ki=6.92, IC50=0.12uM
    12135 4bo9:A (2.9) BS01 3X3 1.1.1.100 GO:0004316 ... O54438 24015914 PDBbind: -logKd/Ki=6.51, IC50=0.31uM
    12136 4bo9:B (2.9) BS01 3X3 1.1.1.100 GO:0004316 ... O54438 24015914 PDBbind: -logKd/Ki=6.51, IC50=0.31uM
    12137 4bps:A (1.081) BS01 3EB 3.3.2.13 GO:0016787 ... Q9KID9 24036425 MOAD: Ki=1.02mM
    PDBbind: -logKd/Ki=2.99, Ki=1.02mM
    12138 4bqa:A (2.5) BS01 dna ? GO:0003700 ... P15036 25670864 PDBbind: Kd=0.3nM
    12139 4bqa:A (2.5) BS02 dna ? GO:0003700 ... P15036 25670864 PDBbind: Kd=0.3nM
    12140 4bqa:D (2.5) BS01 dna ? GO:0003700 ... P15036 25670864 PDBbind: Kd=0.3nM
    12141 4bqa:D (2.5) BS02 dna ? GO:0003700 ... P15036 25670864 PDBbind: Kd=0.3nM
    12142 4bqa:G (2.5) BS01 dna ? GO:0003700 ... P15036 25670864 PDBbind: Kd=0.3nM
    12143 4bqa:G (2.5) BS02 dna ? GO:0003700 ... P15036 25670864 PDBbind: Kd=0.3nM
    12144 4bqg:A (1.9) BS01 50Q 3.6.4.10 GO:0005524 ... P07900 24100158 PDBbind: -logKd/Ki=6.22, Kd=0.60uM
    12145 4bqh:A (1.75) BS01 9VU 2.7.7.23 GO:0003977 ... Q386Q8 23834437 MOAD: Kd=2.58uM
    PDBbind: -logKd/Ki=5.59, Kd=2.58uM
    12146 4bqs:A (2.15) BS02 K2Q 2.7.1.71 GO:0000287 ... P9WPY3 23889343 MOAD: Ki=62uM
    PDBbind: -logKd/Ki=4.21, Ki=62uM
    12147 4bqt:A (2.88) BS01 C5E ? GO:0004888 ... Q8WSF8 22553201 PDBbind: -logKd/Ki=5.79, Kd=1640nM
    12148 4bqt:B (2.88) BS01 C5E ? GO:0004888 ... Q8WSF8 22553201 PDBbind: -logKd/Ki=5.79, Kd=1640nM
    12149 4bqw:A (1.79) BS02 QNM 1.14.11.29 GO:0005506 ... Q9GZT9 23683440 PDBbind: -logKd/Ki=7.48, IC50=0.033uM
    12150 4bqx:A (1.79) BS02 UN9 1.14.11.29 GO:0005506 ... Q9GZT9 23683440 PDBbind: -logKd/Ki=6.52, IC50=0.3uM
    BindingDB: IC50=300nM, EC50=79000nM, Kd=80nM
    12151 4bqy:A (1.53) BS02 FNT 1.14.11.29 GO:0005506 ... Q9GZT9 23683440 PDBbind: -logKd/Ki=5.96, IC50=1.1uM
    BindingDB: IC50=512nM
    12152 4br3:A (2.2) BS01 U85 2.7.1.32
    2.7.1.82    		 N/A P35790 23813777 MOAD: Kd=1.9uM
    PDBbind: -logKd/Ki=5.72, Kd=1.9uM
    12153 4brx:A (2.05) BS01 KGW 2.7.10.2 GO:0004672 ... Q00944 23845217 MOAD: ic50=0.32uM
    PDBbind: -logKd/Ki=6.49, IC50=0.32uM
    12154 4bs0:A (1.09) BS01 6NT 3.2.1.8 GO:0004553 ... P23360 24132235 MOAD: Ki=2uM
    PDBbind: -logKd/Ki=5.70, Ki=2uM
    12155 4bs2:A (-1.00) BS01 rna ? GO:0003676 ... Q13148 24240615 PDBbind: Kd=26.9nM
    12156 4bs4:A (1.89) BS02 A64 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 24116873 MOAD: ic50=72nM
    PDBbind: -logKd/Ki=8.22, IC50=6nM
    12157 4bs5:A (1.25) BS01 MG2 3.4.22.27 GO:0006508 ... O70370 24224654 PDBbind: -logKd/Ki=8.22, IC50=6nM
    12158 4bsq:A (1.96) BS01 QQV 3.4.22.27 GO:0006508 ... O70370 24224654 PDBbind: -logKd/Ki=9.15, IC50=0.7nM
    12159 4bt3:A (1.1) BS02 WTZ 4.1.1.5 GO:0016831 ... P23616 23985082 MOAD: Ki=0.76mM
    PDBbind: -logKd/Ki=3.12, Ki=0.76mM
    12160 4bt4:A (1.6) BS02 QFH 4.1.1.5 GO:0016831 ... P23616 23985082 MOAD: Ki=0.46mM
    PDBbind: -logKd/Ki=3.34, Ki=0.46mM
    12161 4bt5:A (1.1) BS02 23B 4.1.1.5 GO:0016831 ... P23616 23985082 MOAD: Ki=1.72mM
    PDBbind: -logKd/Ki=2.76, Ki=1.72mM
    12162 4bti:F (2.3) BS02 7R9 3.4.21.6 GO:0004252 ... P00742 24175584 MOAD: ic50=0.2nM
    PDBbind: -logKd/Ki=9.70, IC50=0.2nM
    BindingDB: IC50=0.200000nM
    12163 4btk:A (2.0) BS01 DTQ 2.7.11.1 GO:0004672 ... Q5TCY1 24039150 MOAD: Kd=0.24uM
    PDBbind: -logKd/Ki=6.62, Kd=0.24uM
    BindingDB: Kd=240nM
    12164 4btl:A (2.5) BS01 5GZ 3.1.1.7 GO:0001919 ... P21836 23984975 MOAD: ic50=2.5uM
    PDBbind: -logKd/Ki=5.60, IC50=2.5uM
    BindingDB: IC50=2500nM
    12165 4btl:A (2.5) BS02 5GZ 3.1.1.7 GO:0001919 ... P21836 23984975 MOAD: ic50=2.5uM
    PDBbind: -logKd/Ki=5.60, IC50=2.5uM
    BindingDB: IC50=2500nM
    12166 4btm:A (2.54) BS01 F8E 2.7.11.1 GO:0004672 ... Q5TCY1 24039150 PDBbind: -logKd/Ki=5.39, Kd=4.1uM
    BindingDB: Kd=4100nM
    12167 4btt:F (2.59) BS02 VYR 3.4.21.6 GO:0004252 ... P00742 24175584 PDBbind: -logKd/Ki=8.84, IC50=1.43nM
    BindingDB: IC50=2.6nM
    12168 4btu:B (2.37) BS02 6XS 3.4.21.6 GO:0004252 ... P00742 24175584 MOAD: ic50=0.5nM
    PDBbind: -logKd/Ki=9.30, IC50=0.5nM
    BindingDB: IC50=0.500000nM
    12169 4btw:A (2.8) BS04 JW7 1.4.3.21 GO:0005507 ... Q16853 24304424 PDBbind: -logKd/Ki=7.15, IC50=0.071uM
    12170 4btw:B (2.8) BS01 JW7 1.4.3.21 GO:0005507 ... Q16853 24304424 PDBbind: -logKd/Ki=7.15, IC50=0.071uM
    12171 4btw:B (2.8) BS05 JW7 1.4.3.21 GO:0005507 ... Q16853 24304424 PDBbind: -logKd/Ki=7.15, IC50=0.071uM
    12172 4btx:A (2.78) BS04 WF8 1.4.3.21 GO:0005507 ... Q16853 24304424 PDBbind: -logKd/Ki=6.54, Ki=0.29uM
    BindingDB: Kd=200nM, IC50=290nM
    12173 4btx:B (2.78) BS01 WF8 1.4.3.21 GO:0005507 ... Q16853 24304424 PDBbind: -logKd/Ki=6.54, Ki=0.29uM
    BindingDB: Kd=200nM, IC50=290nM
    12174 4btx:B (2.78) BS05 WF8 1.4.3.21 GO:0005507 ... Q16853 24304424 PDBbind: -logKd/Ki=6.54, Ki=0.29uM
    BindingDB: Kd=200nM, IC50=290nM
    12175 4bty:A (3.1) BS04 JWF 1.4.3.21 GO:0005507 ... Q16853 24304424 PDBbind: -logKd/Ki=7.70, IC50=0.020uM
    12176 4bty:B (3.1) BS04 JWF 1.4.3.21 GO:0005507 ... Q16853 24304424 PDBbind: -logKd/Ki=7.70, IC50=0.020uM
    12177 4bup:A (2.166) BS02 SAM 2.1.1.361
    2.1.1.362    		 GO:0042799 ... Q3U8K7 24049080 MOAD: Kd=11.2uM
    PDBbind: -logKd/Ki=4.95, Kd=11.2uM
    12178 4buq:A (2.199) BS01 KGM ? GO:0007155 ... A2IC68 24900609 MOAD: Kd=7.3nM
    PDBbind: -logKd/Ki=8.14, Kd=7.3nM
    12179 4bvb:A (2.0) BS01 OCZ 2.3.1.286 GO:0017136 ... Q9NTG7 23840057 PDBbind: -logKd/Ki=4.48, Ki=33.4uM
    BindingDB: IC50=>50000nM
    12180 4bw0:B (2.33) BS01 rna ? GO:0001682 ... O29494 24149842 PDBbind: Kd=10pM
    12181 4bw1:A (1.4) BS01 S5B ? N/A O60885 24000170 MOAD: ic50=1.26uM
    PDBbind: -logKd/Ki=5.90, IC50=1.26uM
    BindingDB: IC50=1258.93nM
    12182 4bw2:A (1.92) BS01 UTH ? N/A O60885 24000170 MOAD: ic50=6.31uM
    PDBbind: -logKd/Ki=5.20, IC50=6.31uM
    12183 4bw3:A (1.5) BS01 9BM ? N/A O60885 24000170 MOAD: ic50=501nM
    PDBbind: -logKd/Ki=6.30, IC50=0.50uM
    12184 4bw4:A (1.67) BS01 9B6 ? N/A O60885 24000170 MOAD: ic50=631nM
    PDBbind: -logKd/Ki=6.20, IC50=0.63uM
    12185 4bxk:A (2.2) BS01 1IU 3.4.15.1 GO:0006508 ... P12821 24015848 MOAD: Ki=11.21nM
    PDBbind: -logKd/Ki=7.95, Ki=11.21nM
    12186 4bxn:A (2.793) BS02 6LX ? GO:0003777 ... P52732 23875972 PDBbind: -logKd/Ki=8.00, Kd<10nM
    BindingDB: IC50=0.140000nM, Ki=0.500000nM, Kd=>10.0nM
    12187 4bxo:B (2.15) BS01 dna ? GO:0000785 ... Q9BTP7 23932590 PDBbind: Kd=1.85uM
    12188 4bxo:B (2.15) BS02 dna ? GO:0000785 ... Q9BTP7 23932590 PDBbind: Kd=1.85uM
    12189 4byi:A (2.6) BS01 FH3 2.7.11.1 GO:0000212 ... O14965 24195668 PDBbind: -logKd/Ki=8.05, IC50=9nM
    12190 4byj:A (2.75) BS01 FH5 2.7.11.1 GO:0000212 ... O14965 24195668 PDBbind: -logKd/Ki=6.57, IC50=0.27uM
    12191 4bzn:A (1.9) BS01 UGX 2.7.11.1 GO:0004672 ... P11309 24139169 MOAD: ic50=1.441uM
    PDBbind: -logKd/Ki=5.84, IC50=1.441uM
    BindingDB: IC50=1441nM
    12192 4bzo:A (2.1) BS01 676 2.7.11.1 GO:0004672 ... P11309 24139169 MOAD: ic50=0.013uM
    PDBbind: -logKd/Ki=7.89, IC50=0.013uM
    BindingDB: IC50=13nM
    12193 4bzr:A (1.84) BS02 K26 3.4.15.1 GO:0006508 ... P12821 24900839 PDBbind: -logKd/Ki=7.60, IC50=25nM
    BindingDB: Ki=11nM, IC50=110nM
    12194 4bzs:A (2.1) BS02 K26 3.4.15.1 GO:0006508 ... P12821 24900839 MOAD: Ki=75nM
    PDBbind: -logKd/Ki=7.12, Ki=75nM
    BindingDB: Ki=11nM, IC50=110nM
    12195 4c0r:A (1.547) BS01 GDS ? N/A Q93DA5 23701283 MOAD: Kd=12.2uM
    PDBbind: -logKd/Ki=4.91, Kd=12.2uM
    12196 4c1c:A (1.18) BS01 MCO 3.5.2.6 GO:0008270 ... P04190 26482303 PDBbind: -logKd/Ki=4.97, IC50=10.7uM
    12197 4c1d:A (1.198) BS01 X8Z 3.5.2.6 GO:0016787 ... Q9K2N0 26482303 PDBbind: -logKd/Ki=5.36, IC50=4.4uM
    12198 4c1e:A (1.399) BS01 MCO 3.5.2.6 GO:0016787 ... Q9K2N0 26482303 PDBbind: -logKd/Ki=7.14, IC50=0.072uM
    12199 4c1f:A (2.01) BS01 X8Z 3.5.2.6 GO:0008270 ... P52699 26482303 PDBbind: -logKd/Ki=4.63, IC50=23.3uM
    12200 4c1g:A (1.714) BS03 MCO 3.5.2.6 GO:0008270 ... P52699 26482303 PDBbind: -logKd/Ki=5.14, IC50=7.2uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218