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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    11601 3zvk:G (2.5) BS02 dna ? GO:0003677 ... Q4UNB3 22140099 PDBbind: Kd=0.11uM
    11602 3zvk:H (2.5) BS01 dna ? GO:0003677 ... Q4UNB3 22140099 PDBbind: Kd=0.11uM
    11603 3zvk:H (2.5) BS02 dna ? GO:0003677 ... Q4UNB3 22140099 PDBbind: Kd=0.11uM
    11604 3zvt:A (3.1) BS01 B07 3.4.16.4 GO:0000270 ... P39045 21574608 PDBbind: -logKd/Ki=5.92, Ki=1.2uM
    BindingDB: IC50=1300nM, Ki=1500nM
    11605 3zvv:A (2.5) BS01 XAZ 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 21925880 MOAD: ic50=915uM
    PDBbind: -logKd/Ki=3.04, IC50=915uM
    BindingDB: IC50=915000nM
    11606 3zvw:B (2.0) BS01 FP5 3.4.16.4 GO:0000270 ... P39045 21574608 PDBbind: -logKd/Ki=3.90, Ki=125uM
    BindingDB: Ki=125000nM, IC50=320000nM
    11607 3zw3:A (2.8) BS01 ZW3 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 21925880 PDBbind: -logKd/Ki=7.47, IC50=34nM
    11608 3zxe:A (1.67) BS01 PGZ ? GO:0005515 ... P47929 22059385 MOAD: Kd=450uM
    PDBbind: -logKd/Ki=3.35, Kd=450uM
    11609 3zxh:A (1.3) BS07 E41 3.4.24.- GO:0004222 ... P45452 21937229 PDBbind: -logKd/Ki=8.52, IC50=3.0nM
    BindingDB: IC50=3nM
    11610 3zxh:B (1.3) BS06 E41 3.4.24.- GO:0004222 ... P45452 21937229 PDBbind: -logKd/Ki=8.52, IC50=3.0nM
    BindingDB: IC50=3nM
    11611 3zxr:A (2.15) BS01 IQ1 6.3.1.2 GO:0000287 ... P9WN39 22369127 MOAD: ic50=0.02uM
    PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    11612 3zxr:F (2.15) BS01 IQ1 6.3.1.2 GO:0000287 ... P9WN39 22369127 MOAD: ic50=0.02uM
    PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    11613 3zxv:A (2.26) BS01 MXI 6.3.1.2 GO:0000287 ... P9WN39 22369127 MOAD: ic50=0.049uM
    PDBbind: -logKd/Ki=7.31, IC50=0.049uM
    11614 3zxv:F (2.26) BS01 MXI 6.3.1.2 GO:0000287 ... P9WN39 22369127 MOAD: ic50=0.049uM
    PDBbind: -logKd/Ki=7.31, IC50=0.049uM
    11615 3zxz:A (1.8) BS01 KRW 2.7.10.1 GO:0004672 ... P08581 22924734 MOAD: Ki=0.004uM
    PDBbind: -logKd/Ki=8.40, Ki=0.004uM
    BindingDB: IC50=4nM, EC50=0.300000nM, Ki=5nM
    11616 3zy2:A (1.54) BS01 GDP 2.4.1.221 GO:0005783 ... Q18014 21966509 MOAD: Kd=0.35uM
    PDBbind: -logKd/Ki=6.46, Kd=0.35uM
    11617 3zy5:A (1.96) BS01 GFB 2.4.1.221 GO:0005783 ... Q18014 21966509 MOAD: Kd=0.23uM
    PDBbind: -logKd/Ki=6.64, Kd=0.23uM
    11618 3zya:A (1.9) BS01 2A8 2.7.11.24 GO:0000077 ... Q16539 22198732 PDBbind: -logKd/Ki=7.00, IC50=0.10uM
    BindingDB: IC50=50nM
    11619 3zyf:A (1.944) BS02 147 ? GO:0005737 ... Q05097 21919164 MOAD: Kd=14.1uM
    PDBbind: -logKd/Ki=4.85, Kd=14.1uM
    11620 3zyh:A (1.501) BS02 G0S ? GO:0005737 ... Q05097 21919164 PDBbind: -logKd/Ki=4.29, Kd=51.5uM
    11621 3zyr:A (1.65) BS01 BMA ? GO:0030246 ... G1EUI6 22692206 PDBbind: -logKd/Ki=5.34, Kd=4.6uM
    11622 3zyr:A (1.65) BS02 MAN ? GO:0030246 ... G1EUI6 22692206 PDBbind: -logKd/Ki=5.34, Kd=4.6uM
    11623 3zyu:A (1.5) BS01 1GH ? N/A O60885 21964340 MOAD: ic50=0.1uM
    PDBbind: -logKd/Ki=7.00, Kd=0.1uM
    BindingDB: IC50=790nM, Ki=9.0nM, Kd=53nM
    11624 3zze:A (1.87) BS01 6XP 2.7.10.1 GO:0004672 ... P08581 22924734 MOAD: Ki=0.0013uM
    PDBbind: -logKd/Ki=8.89, Ki=1.3nM
    11625 3zzf:A (2.2) BS01 NLG 1.2.1.38
    2.7.2.8    		 GO:0005737 ... Q01217 22529931 MOAD: Ki=400mM
    PDBbind: -logKd/Ki=0.40, Ki=400mM
    11626 3zzh:C (2.1) BS01 ARG 1.2.1.38
    2.7.2.8    		 GO:0005737 ... Q01217 22529931 PDBbind: -logKd/Ki=3.36, IC50=0.44mM
    11627 456c:A (2.4) BS04 CBP 3.4.24.- GO:0004222 ... P45452 10074939 MOAD: Ki=0.17nM
    PDBbind: -logKd/Ki=9.77, Ki=0.17nM
    11628 4a12:A (3.15) BS01 dna ? GO:0003677 ... Q2FZ56 23300457 PDBbind: Kd=0.5nM
    11629 4a12:A (3.15) BS02 dna ? GO:0003677 ... Q2FZ56 23300457 PDBbind: Kd=0.5nM
    11630 4a12:B (3.15) BS01 dna ? GO:0003677 ... Q2FZ56 23300457 PDBbind: Kd=0.5nM
    11631 4a12:B (3.15) BS02 dna ? GO:0003677 ... Q2FZ56 23300457 PDBbind: Kd=0.5nM
    11632 4a12:C (3.15) BS01 dna ? GO:0003677 ... Q2FZ56 23300457 PDBbind: Kd=0.5nM
    11633 4a12:C (3.15) BS02 dna ? GO:0003677 ... Q2FZ56 23300457 PDBbind: Kd=0.5nM
    11634 4a12:D (3.15) BS01 dna ? GO:0003677 ... Q2FZ56 23300457 PDBbind: Kd=0.5nM
    11635 4a12:D (3.15) BS02 dna ? GO:0003677 ... Q2FZ56 23300457 PDBbind: Kd=0.5nM
    11636 4a16:A (2.65) BS01 H34 3.1.1.7 GO:0001919 ... P21836 22052791 PDBbind: -logKd/Ki=9.37, IC50=0.43nM
    11637 4a22:A (1.9) BS01 TD4 4.1.2.13 GO:0004332 ... P9WQA3 21949126 MOAD: Kd=6.8nM
    PDBbind: -logKd/Ki=8.49, IC50=3.2nM
    BindingDB: IC50=3.2nM
    11638 4a22:B (1.9) BS01 TD4 4.1.2.13 GO:0004332 ... P9WQA3 21949126 MOAD: Kd=6.8nM
    PDBbind: -logKd/Ki=8.49, IC50=3.2nM
    BindingDB: IC50=3.2nM
    11639 4a23:A (2.4) BS01 C56 3.1.1.7 GO:0001919 ... P21836 22140425 MOAD: ic50=1.3uM
    PDBbind: -logKd/Ki=5.89, IC50=1.3uM
    11640 4a4e:A (-1.00) BS01 2MR ? GO:0003723 ... Q16637 22101937 PDBbind: -logKd/Ki=3.32, Kd=0.476mM
    11641 4a4f:A (-1.00) BS01 2MR ? GO:0003723 ... O75940 22101937 PDBbind: -logKd/Ki=2.88, Kd=1.317mM
    11642 4a4g:A (-1.00) BS01 DA2 ? GO:0003723 ... Q16637 22101937 PDBbind: -logKd/Ki=2.99, Kd=1.025mM
    11643 4a4h:A (-1.00) BS01 DA2 ? GO:0003723 ... O75940 22101937 PDBbind: -logKd/Ki=2.77, Kd=1.706mM
    11644 4a4l:A (2.35) BS02 939 2.7.11.21 GO:0004672 ... P53350 22154349 MOAD: ic50=0.015uM
    PDBbind: -logKd/Ki=7.82, IC50=0.015uM
    BindingDB: IC50=15nM
    11645 4a4o:A (2.7) BS02 664 2.7.11.21 GO:0004672 ... P53350 22154349 PDBbind: -logKd/Ki=8.05, IC50=0.009uM
    BindingDB: IC50=9nM
    11646 4a4q:A (1.8) BS01 UX9 3.4.23.16 GO:0004190 ... Q8Q3H0 22376008 PDBbind: -logKd/Ki=9.40, Ki=0.4nM
    11647 4a4q:B (1.8) BS01 UX9 3.4.23.16 GO:0004190 ... Q8Q3H0 22376008 PDBbind: -logKd/Ki=9.40, Ki=0.4nM
    11648 4a4v:A (2.0) BS01 YFD ? GO:0003677 ... P37231 23286787 PDBbind: -logKd/Ki=6.54, Kd=0.287uM
    BindingDB: EC50=1200nM, Kd=287nM
    11649 4a4w:A (2.0) BS01 YFB ? GO:0003677 ... P37231 23286787 PDBbind: -logKd/Ki=7.72, Kd=19nM
    BindingDB: Kd=19nM, EC50=73nM
    11650 4a4x:A (2.4) BS01 JUP 2.7.11.1 GO:0004672 ... P51955 22404346 MOAD: ic50=0.059uM
    PDBbind: -logKd/Ki=7.23, IC50=0.059uM
    BindingDB: IC50=2700nM
    11651 4a50:A (2.75) BS02 DQ6 ? GO:0003777 ... P52732 22248262 PDBbind: -logKd/Ki=7.91, Ki=12.2nM
    BindingDB: Ki=11.1nM
    11652 4a51:A (2.75) BS03 DQ8 ? GO:0003777 ... P52732 22248262 PDBbind: -logKd/Ki=6.73, Ki=185.8nM
    BindingDB: Ki=185.8nM
    11653 4a6b:A (1.8) BS01 QG8 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P35963 22376008 PDBbind: -logKd/Ki=8.38, Ki=4.2nM
    11654 4a6b:B (1.8) BS01 QG8 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P35963 22376008 MOAD: Ki=12nM
    PDBbind: -logKd/Ki=8.38, Ki=4.2nM
    11655 4a6c:A (1.5) BS01 QG9 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P35963 22376008 PDBbind: -logKd/Ki=7.92, Ki=12nM
    11656 4a6c:B (1.5) BS01 QG9 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P35963 22376008 MOAD: Ki=4.2nM
    PDBbind: -logKd/Ki=7.92, Ki=12nM
    11657 4a6l:A (2.05) BS01 P43 3.4.21.59 GO:0004252 ... P20231 22192588 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    11658 4a6l:C (2.05) BS01 P43 3.4.21.59 GO:0004252 ... P20231 22192588 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    11659 4a6s:A (2.15) BS02 GS9 ? GO:0005737 ... Q05097 24057051 PDBbind: -logKd/Ki=5.20, Kd=6.3uM
    11660 4a6v:A (1.46) BS03 IKY N/A GO:0006508 ... N/A 22489069 MOAD: ic50=1.9uM
    PDBbind: -logKd/Ki=5.72, IC50=1.9uM
    11661 4a6w:A (1.46) BS02 5C1 N/A GO:0006508 ... N/A 22489069 MOAD: ic50=1.9uM
    PDBbind: -logKd/Ki=5.72, IC50=1.9uM
    11662 4a75:A (1.75) BS01 dna ? GO:0003676 ... B4F6I0 22570413 PDBbind: Kd=169nM
    11663 4a75:C (1.75) BS01 dna ? GO:0003676 ... B4F6I0 22570413 PDBbind: Kd=169nM
    11664 4a75:E (1.75) BS01 dna ? GO:0003676 ... B4F6I0 22570413 PDBbind: Kd=169nM
    11665 4a75:G (1.75) BS01 dna ? GO:0003676 ... B4F6I0 22570413 PDBbind: Kd=169nM
    11666 4a76:A (1.92) BS01 dna ? GO:0003676 ... B4F6I0 22570413 PDBbind: Kd=59nM
    11667 4a76:C (1.92) BS01 dna ? GO:0003676 ... B4F6I0 22570413 PDBbind: Kd=59nM
    11668 4a76:E (1.92) BS01 dna ? GO:0003676 ... B4F6I0 22570413 PDBbind: Kd=59nM
    11669 4a76:E (1.92) BS02 dna ? GO:0003676 ... B4F6I0 22570413 PDBbind: Kd=59nM
    11670 4a76:G (1.92) BS01 dna ? GO:0003676 ... B4F6I0 22570413 PDBbind: Kd=59nM
    11671 4a76:G (1.92) BS02 dna ? GO:0003676 ... B4F6I0 22570413 PDBbind: Kd=59nM
    11672 4a7b:A (2.2) BS01 3W5 3.4.24.- GO:0004222 ... P45452 22153941 PDBbind: -logKd/Ki=7.40, IC50=39.8nM
    11673 4a7c:A (2.3) BS01 E46 2.7.11.1 GO:0004672 ... P11309 22266039 MOAD: ic50=0.006uM
    PDBbind: -logKd/Ki=8.22, IC50=0.006uM
    BindingDB: IC50=6nM, EC50=45nM
    11674 4a7i:B (2.4) BS02 A7I 3.4.21.6 GO:0004252 ... P00742 22190348 MOAD: Ki=0.002uM
    PDBbind: -logKd/Ki=8.70, Ki=0.002uM
    11675 4a95:A (1.55) BS01 9MT 2.3.1.97 GO:0004379 ... A5K1A2 22439843 MOAD: Ki=1.73uM
    PDBbind: -logKd/Ki=5.76, Ki=1.73uM
    11676 4a9c:B (2.1) BS01 B5F 3.1.3.86 GO:0016791 ... O15357 22330088 MOAD: ic50=24.8uM
    PDBbind: -logKd/Ki=4.61, IC50=24.8uM
    11677 4a9i:A (2.25) BS01 P9I ? N/A P25440 22136404 PDBbind: -logKd/Ki=4.90, IC50=12.6uM
    11678 4a9m:A (2.06) BS01 P9M ? N/A P25440 22136469 MOAD: ic50=0.5uM
    PDBbind: -logKd/Ki=6.30, IC50=0.5uM
    BindingDB: IC50=500nM
    11679 4a9n:A (1.85) BS01 A9N ? N/A P25440 22136469 MOAD: ic50=1.5uM
    PDBbind: -logKd/Ki=5.82, IC50=1.5uM
    11680 4a9r:A (2.85) BS01 RU5 2.7.11.1 GO:0004672 ... O96017 23058106 PDBbind: -logKd/Ki=7.80, IC50=16nM
    BindingDB: IC50=15nM
    11681 4a9s:A (2.66) BS01 RU9 2.7.11.1 GO:0004672 ... O96017 23058106 PDBbind: -logKd/Ki=7.21, IC50=61nM
    BindingDB: IC50=61nM
    11682 4a9t:A (2.7) BS01 A9T 2.7.11.1 GO:0004672 ... O96017 23058106 PDBbind: -logKd/Ki=7.15, IC50=70nM
    11683 4a9u:A (2.48) BS01 A9U 2.7.11.1 GO:0004672 ... O96017 23058106 PDBbind: -logKd/Ki=7.22, IC50=60nM
    BindingDB: IC50=70nM
    11684 4aa0:A (1.8) BS01 AA0 2.7.11.24 GO:0000077 ... Q16539 22608965 MOAD: ic50=35nM
    PDBbind: -logKd/Ki=7.46, IC50=35nM
    BindingDB: IC50=420nM
    11685 4aa4:A (2.3) BS01 QC0 2.7.11.24 GO:0000077 ... Q16539 22608965 MOAD: ic50=9nM
    PDBbind: -logKd/Ki=8.05, IC50=9.0nM
    BindingDB: IC50=15.85nM
    11686 4aa5:A (2.38) BS01 NQB 2.7.11.24 GO:0000077 ... Q16539 22608965 MOAD: ic50=16nM
    PDBbind: -logKd/Ki=7.80, IC50=16nM
    BindingDB: IC50=15.85nM
    11687 4aa7:A (2.0) BS01 R82 2.3.1.157
    2.7.7.23    		 GO:0003977 ... P0ACC7 22297115 MOAD: ic50=2uM
    PDBbind: -logKd/Ki=5.70, IC50=2uM
    BindingDB: IC50=2000nM
    11688 4aa7:B (2.0) BS01 R82 2.3.1.157
    2.7.7.23    		 GO:0003977 ... P0ACC7 22297115 MOAD: ic50=2uM
    PDBbind: -logKd/Ki=5.70, IC50=2uM
    BindingDB: IC50=2000nM
    11689 4aac:A (2.5) BS01 AAV 2.7.11.24 GO:0000077 ... Q16539 22608965 MOAD: ic50=6.7nM
    PDBbind: -logKd/Ki=8.17, IC50=6.7nM
    BindingDB: IC50=4.68nM
    11690 4aaw:A (2.2) BS01 R84 2.3.1.157
    2.7.7.23    		 GO:0000287 ... Q8DQ18 22297115 MOAD: ic50=0.5uM
    PDBbind: -logKd/Ki=6.30, IC50=0.5uM
    11691 4ab8:A (1.6) BS02 VXU 3.4.21.4 GO:0004175 ... P00760 22187139 PDBbind: -logKd/Ki=3.87, Kd=136uM
    11692 4ab9:A (1.2) BS02 VXQ 3.4.21.4 GO:0004175 ... P00760 22187139 PDBbind: -logKd/Ki=3.33, Kd=466uM
    11693 4aba:A (1.25) BS02 SW1 3.4.21.4 GO:0004175 ... P00760 22187139 PDBbind: -logKd/Ki=3.82, Kd=153uM
    11694 4abb:A (1.25) BS02 K9S 3.4.21.4 GO:0004175 ... P00760 22187139 PDBbind: -logKd/Ki=4.51, Kd=31uM
    11695 4abd:A (1.25) BS02 SW2 3.4.21.4 GO:0004175 ... P00760 22187139 PDBbind: -logKd/Ki=4.40, Kd=40uM
    11696 4abe:A (1.3) BS02 913 3.4.21.4 GO:0004175 ... P00760 22187139 PDBbind: -logKd/Ki=3.40, Kd=400uM
    11697 4abf:A (1.3) BS02 513 3.4.21.4 GO:0004175 ... P00760 22187139 PDBbind: -logKd/Ki=4.62, Kd=24uM
    11698 4abg:A (1.52) BS02 91B 3.4.21.4 GO:0004175 ... P00760 22187139 PDBbind: -logKd/Ki=3.57, Kd=271uM
    11699 4abh:A (1.25) BS02 7Z3 3.4.21.4 GO:0004175 ... P00760 22187139 PDBbind: -logKd/Ki=4.15, Kd=71uM
    11700 4abk:A (1.6) BS01 AR6 2.4.2.- N/A Q460N5 23473667 PDBbind: -logKd/Ki=5.72, Kd=1.9uM
    11701 4abu:A (1.86) BS01 FT1 ? GO:0005179 ... P02766 22973437 MOAD: ic50=0.52uM
    PDBbind: -logKd/Ki=6.28, IC50=0.52uM
    BindingDB: Kd=13.9nM, IC50=520nM
    11702 4abu:B (1.86) BS01 FT1 ? GO:0005179 ... P02766 22973437 MOAD: ic50=0.52uM
    PDBbind: -logKd/Ki=6.28, IC50=0.52uM
    BindingDB: Kd=13.9nM, IC50=520nM
    11703 4abv:A (1.8) BS01 FT2 ? GO:0005179 ... P02766 22973437 MOAD: ic50=0.85uM
    PDBbind: -logKd/Ki=6.07, IC50=0.85uM
    BindingDB: Kd=5.7nM, IC50=850nM
    11704 4abv:B (1.8) BS01 FT2 ? GO:0005179 ... P02766 22973437 MOAD: ic50=0.85uM
    PDBbind: -logKd/Ki=6.07, IC50=0.85uM
    BindingDB: Kd=5.7nM, IC50=850nM
    11705 4ac3:A (2.1) BS01 R83 2.3.1.157
    2.7.7.23    		 GO:0000287 ... Q8DQ18 22297115 MOAD: ic50=110uM
    PDBbind: -logKd/Ki=3.96, IC50=110uM
    11706 4acc:A (2.21) BS01 7YG 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 22489897 MOAD: Ki=20nM
    PDBbind: -logKd/Ki=7.70, Ki=20nM
    BindingDB: Ki=20nM
    11707 4acd:A (2.6) BS01 GR9 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 22489897 PDBbind: -logKd/Ki=8.31, Ki=4.9nM
    BindingDB: Ki=4.9nM
    11708 4acf:A (2.0) BS01 46B 6.3.1.2 GO:0000287 ... P9WN39 N/A PDBbind: -logKd/Ki=5.80, IC50=1.6uM
    11709 4acf:F (2.0) BS01 46B 6.3.1.2 GO:0000287 ... P9WN39 N/A PDBbind: -logKd/Ki=5.80, IC50=1.6uM
    11710 4acg:A (2.6) BS01 6LQ 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 22489897 PDBbind: -logKd/Ki=9.66, Ki=0.22nM
    11711 4ach:A (2.6) BS01 KDI 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 22489897 PDBbind: -logKd/Ki=7.66, Ki=22nM
    BindingDB: Ki=22nM
    11712 4aci:A (1.65) BS01 CIT ? GO:0000287 ... Q8NQ97 23589369 PDBbind: -logKd/Ki=2.22, Kd=6mM
    11713 4acm:A (1.63) BS01 7YG 2.7.11.22 GO:0000082 ... P24941 22489897 MOAD: Ki=210nM
    PDBbind: -logKd/Ki=6.68, Ki=210nM
    11714 4acu:A (1.75) BS01 QN7 3.4.23.46 GO:0004190 ... P56817 22325942 MOAD: ic50=40.7nM
    PDBbind: -logKd/Ki=7.39, IC50=40.7nM
    BindingDB: IC50=20nM
    11715 4acx:A (2.0) BS01 S8Z 3.4.23.46 GO:0004190 ... P56817 22325942 MOAD: ic50=77.6nM
    PDBbind: -logKd/Ki=7.11, IC50=77.6nM
    11716 4ad2:A (2.1) BS01 GLC 3.2.1.130 GO:0004559 ... D6D1V7 22219371 PDBbind: -logKd/Ki=6.20, Kd=625nM
    11717 4ad2:A (2.1) BS02 IFM 3.2.1.130 GO:0004559 ... D6D1V7 22219371 PDBbind: -logKd/Ki=6.20, Kd=625nM
    11718 4ad3:A (2.0) BS01 GLC 3.2.1.130 GO:0004559 ... D6D1V7 22219371 PDBbind: -logKd/Ki=4.62, Kd=24uM
    11719 4ad3:A (2.0) BS02 DMJ 3.2.1.130 GO:0004559 ... D6D1V7 22219371 PDBbind: -logKd/Ki=4.62, Kd=24uM
    11720 4ad6:A (1.85) BS01 GSY 2.7.6.3 GO:0003848 ... A0A0H3JKY1 23565155 MOAD: Kd=16.7uM
    PDBbind: -logKd/Ki=4.78, Kd=16.7uM
    11721 4ad6:A (1.85) BS02 GSY 2.7.6.3 GO:0003848 ... A0A0H3JKY1 23565155 MOAD: Kd=16.7uM
    PDBbind: -logKd/Ki=4.78, Kd=16.7uM
    11722 4ael:A (2.2) BS02 4HN 3.1.4.17 GO:0004114 ... Q9Y233 22321214 MOAD: ic50=12nM
    PDBbind: -logKd/Ki=7.92, IC50=12nM
    BindingDB: IC50=12nM
    11723 4af3:A (2.75) BS01 VX6 2.7.11.1 GO:0004672 ... Q96GD4 22920039 PDBbind: -logKd/Ki=7.51, IC50=31nM
    BindingDB: Ki=18nM, IC50=30nM, Kd=7.4nM
    11724 4afe:A (2.597) BS01 GGY 2.7.11.1 GO:0004672 ... P51955 22404346 PDBbind: -logKd/Ki=7.14, IC50=0.073uM
    BindingDB: IC50=800nM
    11725 4afg:A (2.001) BS01 QMR ? GO:0004888 ... I6L8L2 22619328 MOAD: Ki=5nM
    PDBbind: -logKd/Ki=8.30, Ki=5nM
    11726 4afg:A (2.001) BS02 QMR ? GO:0004888 ... I6L8L2 22619328 MOAD: Ki=5nM
    PDBbind: -logKd/Ki=8.30, Ki=5nM
    11727 4afg:B (2.001) BS01 QMR ? GO:0004888 ... I6L8L2 22619328 MOAD: Ki=5nM
    PDBbind: -logKd/Ki=8.30, Ki=5nM
    11728 4afg:B (2.001) BS02 QMR ? GO:0004888 ... I6L8L2 22619328 MOAD: Ki=5nM
    PDBbind: -logKd/Ki=8.30, Ki=5nM
    11729 4afh:A (1.88) BS01 L0B ? GO:0004888 ... I6L8L2 22619328 MOAD: Ki=0.29nM
    PDBbind: -logKd/Ki=9.54, Ki=0.29nM
    11730 4afh:A (1.88) BS02 L0B ? GO:0004888 ... I6L8L2 22619328 MOAD: Ki=0.29nM
    PDBbind: -logKd/Ki=9.54, Ki=0.29nM
    11731 4afh:B (1.88) BS01 L0B ? GO:0004888 ... I6L8L2 22619328 MOAD: Ki=0.29nM
    PDBbind: -logKd/Ki=9.54, Ki=0.29nM
    11732 4afh:B (1.88) BS02 L0B ? GO:0004888 ... I6L8L2 22619328 MOAD: Ki=0.29nM
    PDBbind: -logKd/Ki=9.54, Ki=0.29nM
    11733 4afj:A (1.98) BS02 SJJ 2.7.11.1
    2.7.11.26    		 GO:0004672 ... P49841 22310227 MOAD: ic50=398nM
    PDBbind: -logKd/Ki=6.40, IC50=398nM
    BindingDB: IC50=1995nM
    11734 4aft:A (3.2) BS01 QMR ? GO:0004888 ... Q8WSF8 22553201 PDBbind: -logKd/Ki=6.47, Kd=342nM
    11735 4aft:A (3.2) BS02 QMR ? GO:0004888 ... Q8WSF8 22553201 PDBbind: -logKd/Ki=6.47, Kd=342nM
    11736 4aft:B (3.2) BS01 QMR ? GO:0004888 ... Q8WSF8 22553201 PDBbind: -logKd/Ki=6.47, Kd=342nM
    11737 4aft:B (3.2) BS02 QMR ? GO:0004888 ... Q8WSF8 22553201 PDBbind: -logKd/Ki=6.47, Kd=342nM
    11738 4ag8:A (1.95) BS01 AXI 2.7.10.1 GO:0004672 ... P35968 22988103 MOAD: Ki=1.1nM
    PDBbind: -logKd/Ki=8.96, Ki=1.1nM
    11739 4agc:A (2.0) BS01 AXI 2.7.10.1 GO:0004672 ... P35968 22988103 MOAD: Ki=0.02nM
    PDBbind: -logKd/Ki=10.70, Ki=0.020nM
    11740 4agd:A (2.81) BS01 B49 2.7.10.1 GO:0004672 ... P35968 22988103 PDBbind: -logKd/Ki=8.41, Ki=3.9nM
    BindingDB: IC50=18900nM, Kd=1.5nM, Ki=9nM
    11741 4agl:A (1.7) BS01 P84 ? GO:0000976 ... P04637 22439615 MOAD: Kd=225uM
    PDBbind: -logKd/Ki=3.65, Kd=225uM
    11742 4agm:A (1.52) BS01 P86 ? GO:0000976 ... P04637 22439615 MOAD: Kd=105uM
    PDBbind: -logKd/Ki=3.98, Kd=105uM
    11743 4agn:A (1.6) BS02 NXG ? GO:0000976 ... P04637 22439615 MOAD: Kd=107uM
    PDBbind: -logKd/Ki=3.97, Kd=107uM
    11744 4ago:A (1.45) BS01 P74 ? GO:0000976 ... P04637 22439615 MOAD: Kd=15.5uM
    PDBbind: -logKd/Ki=4.81, Kd=15.5uM
    11745 4agp:A (1.5) BS01 P51 ? GO:0000976 ... P04637 22439615 MOAD: Kd=20.6uM
    PDBbind: -logKd/Ki=4.69, Kd=20.6uM
    11746 4agq:A (1.42) BS01 P96 ? GO:0000976 ... P04637 22439615 MOAD: Kd=9.7uM
    PDBbind: -logKd/Ki=5.01, Kd=9.7uM
    BindingDB: Kd=10000nM
    11747 4ah9:A (1.7) BS01 0MB 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 23139382 PDBbind: -logKd/Ki=2.46, Kd=3.5mM
    11748 4ah9:A (1.7) BS02 0MB 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 23139382 PDBbind: -logKd/Ki=2.46, Kd=3.5mM
    11749 4ah9:B (1.7) BS01 0MB 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 23139382 PDBbind: -logKd/Ki=2.46, Kd=3.5mM
    11750 4ah9:B (1.7) BS02 0MB 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 23139382 PDBbind: -logKd/Ki=2.46, Kd=3.5mM
    11751 4ahr:A (1.9) BS01 I2E 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 23139382 PDBbind: -logKd/Ki=2.19, Kd=6.5mM
    11752 4ahr:A (1.9) BS02 I2E 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 23139382 PDBbind: -logKd/Ki=2.19, Kd=6.5mM
    11753 4ahr:B (1.9) BS01 I2E 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 23139382 PDBbind: -logKd/Ki=2.19, Kd=6.5mM
    11754 4ahr:B (1.9) BS02 I2E 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 23139382 PDBbind: -logKd/Ki=2.19, Kd=6.5mM
    11755 4ahs:A (1.75) BS01 AKH 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 23139382 PDBbind: -logKd/Ki=2.19, Kd=6.4mM
    11756 4ahs:A (1.75) BS02 AKH 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 23139382 PDBbind: -logKd/Ki=2.19, Kd=6.4mM
    11757 4ahs:B (1.75) BS01 AKH 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 23139382 PDBbind: -logKd/Ki=2.19, Kd=6.4mM
    11758 4ahs:B (1.75) BS02 AKH 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 23139382 PDBbind: -logKd/Ki=2.19, Kd=6.4mM
    11759 4ahu:A (1.9) BS01 ICO 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 23139382 PDBbind: -logKd/Ki=2.27, Kd=5.4mM
    11760 4ahu:A (1.9) BS02 ICO 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 23139382 PDBbind: -logKd/Ki=2.27, Kd=5.4mM
    11761 4ahu:B (1.9) BS01 ICO 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 23139382 PDBbind: -logKd/Ki=2.27, Kd=5.4mM
    11762 4ahu:B (1.9) BS02 ICO 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 23139382 PDBbind: -logKd/Ki=2.27, Kd=5.4mM
    11763 4ahv:A (1.8) BS01 Z5P 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 23139382 PDBbind: -logKd/Ki=1.82, Kd=15mM
    11764 4ahv:A (1.8) BS02 Z5P 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 23139382 PDBbind: -logKd/Ki=1.82, Kd=15mM
    11765 4ahv:B (1.8) BS01 Z5P 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 23139382 PDBbind: -logKd/Ki=1.82, Kd=15mM
    11766 4ahv:B (1.8) BS02 Z5P 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 23139382 PDBbind: -logKd/Ki=1.82, Kd=15mM
    11767 4ai5:A (2.22) BS02 ADK N/A GO:0003824 ... N/A 22684054 MOAD: Kd=1.2mM
    PDBbind: -logKd/Ki=2.92, Kd=1.2mM
    11768 4ai8:A (2.4) BS01 DZA 1.14.11.30
    1.14.11.n4    		 GO:0003714 ... Q9NWT6 22724510 MOAD: ic50>100uM
    PDBbind: -logKd/Ki=4.00, IC50>100uM
    BindingDB: IC50=>100000nM
    11769 4aia:A (1.8) BS02 ADK N/A GO:0003824 ... N/A 22684054 MOAD: Kd=220uM
    PDBbind: -logKd/Ki=3.66, Kd=220uM
    11770 4aig:A (2.0) BS03 FLX 3.4.24.46 GO:0004222 ... P34179 9428736 MOAD: ic50=0.3uM
    PDBbind: -logKd/Ki=6.52, IC50=0.3uM
    11771 4aij:A (2.05) BS01 dna ? GO:0000976 ... B1JJ73 22936808 PDBbind: Kd=46nM
    11772 4aij:A (2.05) BS02 dna ? GO:0000976 ... B1JJ73 22936808 PDBbind: Kd=46nM
    11773 4aij:B (2.05) BS01 dna ? GO:0000976 ... B1JJ73 22936808 PDBbind: Kd=46nM
    11774 4aij:B (2.05) BS02 dna ? GO:0000976 ... B1JJ73 22936808 PDBbind: Kd=46nM
    11775 4aik:A (1.85) BS01 dna ? GO:0000976 ... B1JJ73 22936808 PDBbind: Kd=46nM
    11776 4aik:A (1.85) BS02 dna ? GO:0000976 ... B1JJ73 22936808 PDBbind: Kd=46nM
    11777 4aj1:A (1.87) BS01 AJ1 1.1.1.27 GO:0001666 ... P04642 22417091 MOAD: Kd=770uM
    PDBbind: -logKd/Ki=3.11, Kd=770uM
    BindingDB: Kd=1.000e+6nM, IC50=>5.00e+5nM
    11778 4aj2:A (1.75) BS01 52C 1.1.1.27 GO:0001666 ... P04642 22417091 PDBbind: -logKd/Ki=2.38, Kd=4200uM
    BindingDB: Kd=4.200e+6nM, IC50=>5.00e+5nM
    11779 4aj4:A (1.9) BS01 VAB 1.1.1.27 GO:0001666 ... P04642 22417091 MOAD: Kd=130uM
    PDBbind: -logKd/Ki=3.89, Kd=130uM
    BindingDB: Kd=1.30e+5nM, IC50=>5.00e+5nM
    11780 4aje:A (2.35) BS01 2B4 1.1.1.27 GO:0001666 ... P04642 22417091 MOAD: Kd=210uM
    PDBbind: -logKd/Ki=3.68, Kd=210uM
    BindingDB: Kd=4.70e+5nM, IC50=>5.00e+5nM
    11781 4aje:B (2.35) BS01 2B4 1.1.1.27 GO:0001666 ... P04642 22417091 MOAD: Kd=210uM
    PDBbind: -logKd/Ki=3.68, Kd=210uM
    BindingDB: Kd=4.70e+5nM, IC50=>5.00e+5nM
    11782 4aji:A (1.93) BS01 88R 1.1.1.27 GO:0001666 ... P04642 22417091 MOAD: Kd=280uM
    PDBbind: -logKd/Ki=3.55, Kd=280uM
    BindingDB: Kd=1.000e+6nM, IC50=>5.00e+5nM
    11783 4aji:B (1.93) BS01 88R 1.1.1.27 GO:0001666 ... P04642 22417091 MOAD: Kd=280uM
    PDBbind: -logKd/Ki=3.55, Kd=280uM
    BindingDB: Kd=1.000e+6nM, IC50=>5.00e+5nM
    11784 4ajk:A (2.03) BS01 88S 1.1.1.27 GO:0001666 ... P04642 22417091 MOAD: Kd=770uM
    PDBbind: -logKd/Ki=3.11, Kd=770uM
    BindingDB: Kd=7.70e+5nM, IC50=>5.00e+5nM
    11785 4ajl:A (1.77) BS01 88W 1.1.1.27 GO:0001666 ... P04642 22417091 MOAD: Kd=160uM
    PDBbind: -logKd/Ki=3.80, Kd=160uM
    BindingDB: Kd=1.60e+5nM, IC50=>5.00e+5nM
    11786 4ajn:A (2.1) BS01 88V 1.1.1.27 GO:0001666 ... P04642 22417091 MOAD: Kd=0.069uM
    PDBbind: -logKd/Ki=7.16, Kd=0.069uM
    BindingDB: Kd=69nM, IC50=1.9e+3nM
    11787 4ajn:B (2.1) BS01 88V 1.1.1.27 GO:0001666 ... P04642 22417091 MOAD: Kd=0.069uM
    PDBbind: -logKd/Ki=7.16, Kd=0.069uM
    BindingDB: Kd=69nM, IC50=1.9e+3nM
    11788 4ajo:A (1.96) BS01 88N 1.1.1.27 GO:0001666 ... P04642 22417091 MOAD: Kd=0.093uM
    PDBbind: -logKd/Ki=7.03, Kd=0.093uM
    11789 4ajo:B (1.96) BS01 88N 1.1.1.27 GO:0001666 ... P04642 22417091 MOAD: Kd=0.093uM
    PDBbind: -logKd/Ki=7.03, Kd=0.093uM
    11790 4ajw:A (2.8) BS01 VWN 2.7.1.137
    2.7.1.153    		 GO:0001782 ... O35904 22524426 PDBbind: -logKd/Ki=5.86, IC50=1395nM
    11791 4akn:A (1.82) BS01 S5B ? N/A P25440 22437115 MOAD: ic50=0.79uM
    PDBbind: -logKd/Ki=6.10, IC50=0.79uM
    BindingDB: IC50=794.33nM
    11792 4al4:A (1.78) BS01 W7E 1.1.1.27 GO:0001666 ... P04642 22417091 MOAD: Kd=0.13uM
    PDBbind: -logKd/Ki=6.89, Kd=0.13uM
    BindingDB: IC50=4.2e+3nM, Kd=1.3e+2nM
    11793 4al4:A (1.78) BS02 W7E 1.1.1.27 GO:0001666 ... P04642 22417091 MOAD: Kd=0.13uM
    PDBbind: -logKd/Ki=6.89, Kd=0.13uM
    BindingDB: IC50=4.2e+3nM, Kd=1.3e+2nM
    11794 4al4:B (1.78) BS01 W7E 1.1.1.27 GO:0001666 ... P04642 22417091 MOAD: Kd=0.13uM
    PDBbind: -logKd/Ki=6.89, Kd=0.13uM
    BindingDB: IC50=4.2e+3nM, Kd=1.3e+2nM
    11795 4al4:B (1.78) BS02 W7E 1.1.1.27 GO:0001666 ... P04642 22417091 MOAD: Kd=0.13uM
    PDBbind: -logKd/Ki=6.89, Kd=0.13uM
    BindingDB: IC50=4.2e+3nM, Kd=1.3e+2nM
    11796 4alg:A (1.6) BS01 1GH ? N/A P25440 22437115 MOAD: ic50=0.5uM
    PDBbind: -logKd/Ki=6.30, IC50=0.50uM
    BindingDB: IC50=501.19nM, Kd=70nM, Ki=50nM
    11797 4alp:A (1.48) BS01 rna ? GO:0003676 ... B4F6I0 22570413 PDBbind: Kd=2760nM
    11798 4alp:D (1.48) BS01 rna ? GO:0003676 ... B4F6I0 22570413 PDBbind: Kd=2760nM
    11799 4alu:A (2.6) BS01 79O 2.7.11.1 GO:0004672 ... P11309 22542012 PDBbind: -logKd/Ki=7.77, IC50=17nM
    BindingDB: IC50=17nM
    11800 4alv:A (2.59) BS01 R9P 2.7.11.1 GO:0004672 ... P11309 22542012 PDBbind: -logKd/Ki=8.15, IC50=7nM
    BindingDB: IC50=7.0nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218