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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    11201 3vp1:A (2.3) BS01 04A 3.5.1.2 GO:0004359 ... O94925 22538822 PDBbind: -logKd/Ki=5.48, IC50=3.3uM
    BindingDB: IC50=100nM, Kd=200nM
    11202 3vp2:A (2.7) BS01 BP0 3.5.1.2 GO:0004359 ... O94925 22538822 PDBbind: -logKd/Ki=5.10, IC50=8.02uM
    BindingDB: IC50=100000nM
    11203 3vp3:A (2.7) BS01 BP8 3.5.1.2 GO:0004359 ... O94925 22538822 PDBbind: -logKd/Ki=4.95, IC50=11.1uM
    11204 3vp4:A (2.45) BS01 BP9 3.5.1.2 GO:0004359 ... O94925 22538822 PDBbind: -logKd/Ki=4.73, IC50=18.6uM
    11205 3vqh:A (1.95) BS02 IQB 2.7.11.11 GO:0000287 ... P17612 22869112 PDBbind: -logKd/Ki=5.92, IC50=1.2uM
    BindingDB: Ki=48nM
    11206 3vqs:A (1.9) BS01 JT1 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 22615294 MOAD: ic50=0.0178uM
    PDBbind: -logKd/Ki=7.75, IC50=0.0178uM
    11207 3vqu:A (2.4) BS01 O22 2.7.12.1 GO:0004672 ... P33981 24900510 PDBbind: -logKd/Ki=7.43, IC50=37nM
    11208 3vrt:A (2.4) BS02 YS2 ? GO:0003677 ... P13053 22512505 MOAD: ic50=2.7nM
    PDBbind: -logKd/Ki=8.57, IC50=2.7nM
    11209 3vru:A (2.0) BS02 YS3 ? GO:0003677 ... P13053 22512505 MOAD: ic50=0.1nM
    PDBbind: -logKd/Ki=10.00, IC50=0.10nM
    11210 3vrv:A (1.9) BS02 YSD ? GO:0003677 ... P13053 22512505 MOAD: ic50=0.029nM
    PDBbind: -logKd/Ki=10.54, IC50=0.029nM
    11211 3vrw:A (2.4) BS02 YS5 ? GO:0003677 ... P13053 22512505 MOAD: ic50=0.41nM
    PDBbind: -logKd/Ki=9.39, IC50=0.41nM
    11212 3vry:A (2.481) BS01 B43 2.7.10.2 GO:0004672 ... P08631 23596204 MOAD: ic50=7.7nM
    PDBbind: -logKd/Ki=8.11, IC50=7.7nM
    11213 3vs3:A (2.17) BS01 VSE 2.7.10.2 GO:0004672 ... P08631 23596204 PDBbind: -logKd/Ki=9.37, IC50=0.43nM
    BindingDB: IC50=0.426580nM
    11214 3vsw:A (3.0) BS01 R31 3.4.23.15 GO:0004190 ... P00797 22726934 PDBbind: -logKd/Ki=6.89, IC50=130nM
    BindingDB: IC50=130nM
    11215 3vsx:A (2.8) BS01 R32 3.4.23.15 GO:0004190 ... P00797 22726934 PDBbind: -logKd/Ki=8.85, IC50=1.4nM
    BindingDB: IC50=1.4nM
    11216 3vtb:A (2.0) BS02 TKA ? GO:0003677 ... P13053 24773565 MOAD: ic50=0.5nM
    PDBbind: -logKd/Ki=9.30, IC50=0.5nM
    11217 3vtc:A (1.5) BS02 TK3 ? GO:0003677 ... P13053 24773565 MOAD: ic50=13nM
    PDBbind: -logKd/Ki=7.89, IC50=13nM
    11218 3vtd:A (2.7) BS02 TKD ? GO:0003677 ... P13053 24773565 PDBbind: -logKd/Ki=7.92, IC50=12nM
    11219 3vuc:A (2.6) BS01 HHE 3.4.23.15 GO:0004190 ... P00797 24900544 PDBbind: -logKd/Ki=9.05, IC50=0.9nM
    11220 3vv6:A (2.05) BS01 B00 3.4.23.46 GO:0004190 ... P56817 22998419 MOAD: ic50=157uM
    PDBbind: -logKd/Ki=3.80, IC50=157uM
    11221 3vv7:A (2.1) BS01 0B1 3.4.23.46 GO:0004190 ... P56817 22998419 MOAD: ic50=4.6uM
    PDBbind: -logKd/Ki=5.34, IC50=4.6uM
    11222 3vv8:A (2.5) BS01 B02 3.4.23.46 GO:0004190 ... P56817 22998419 MOAD: ic50=17.1uM
    PDBbind: -logKd/Ki=4.77, IC50=17.1uM
    11223 3vva:A (2.59) BS03 CHW 1.-.-.- GO:0005739 ... Q26710 23487766 PDBbind: -logKd/Ki=9.32, IC50=0.48nM
    11224 3vvy:A (1.63) BS01 ET ? GO:0000976 ... A0A0F6AY66 23800819 PDBbind: -logKd/Ki=4.84, Kd=14.6uM
    11225 3vvz:A (2.51) BS01 RHQ ? GO:0000976 ... A0A0F6AY66 23800819 PDBbind: -logKd/Ki=4.58, Kd=26.4uM
    11226 3vw0:B (2.6) BS01 DEQ ? GO:0000976 ... A0A0F6AY66 23800819 PDBbind: -logKd/Ki=4.67, Kd=21.2uM
    11227 3vw1:B (2.21) BS01 CVI ? GO:0000976 ... A0A0F6AY66 23800819 PDBbind: -logKd/Ki=4.67, Kd=21.2uM
    11228 3vw2:A (2.34) BS01 BER ? GO:0000976 ... A0A0F6AY66 23800819 PDBbind: -logKd/Ki=4.75, Kd=17.9uM
    11229 3vw2:B (2.34) BS01 BER ? GO:0000976 ... A0A0F6AY66 23800819 PDBbind: -logKd/Ki=4.75, Kd=17.9uM
    11230 3vw3:H (2.5) BS01 dna N/A N/A N/A 23519658 PDBbind: Kd=0.22uM
    11231 3vw3:L (2.5) BS01 dna N/A N/A N/A 23519658 PDBbind: Kd=0.22uM
    11232 3vw3:L (2.5) BS02 dna N/A N/A N/A 23519658 PDBbind: Kd=0.22uM
    11233 3vw6:A (2.4) BS01 IM6 2.7.11.25 GO:0004672 ... Q99683 23147077 PDBbind: -logKd/Ki=7.85, IC50=14nM
    BindingDB: IC50=14nM
    11234 3vw7:A (2.2) BS01 VPX 3.2.1.17 GO:0003796 ... P00720
    P25116    		 23222541 PDBbind: -logKd/Ki=8.10, Ki=8nM
    11235 3vw9:A (1.47) BS02 HPJ 4.4.1.5 GO:0004462 ... Q04760 23122816 MOAD: ic50=0.011uM
    PDBbind: -logKd/Ki=7.96, IC50=0.011uM
    BindingDB: Ki=11nM, IC50=11nM
    11236 3vw9:A (1.47) BS04 HPJ 4.4.1.5 GO:0004462 ... Q04760 23122816 MOAD: ic50=0.011uM
    PDBbind: -logKd/Ki=7.96, IC50=0.011uM
    BindingDB: Ki=11nM, IC50=11nM
    11237 3vw9:B (1.47) BS02 HPJ 4.4.1.5 GO:0004462 ... Q04760 23122816 MOAD: ic50=0.011uM
    PDBbind: -logKd/Ki=7.96, IC50=0.011uM
    BindingDB: Ki=11nM, IC50=11nM
    11238 3vw9:B (1.47) BS04 HPJ 4.4.1.5 GO:0004462 ... Q04760 23122816 MOAD: ic50=0.011uM
    PDBbind: -logKd/Ki=7.96, IC50=0.011uM
    BindingDB: Ki=11nM, IC50=11nM
    11239 3vws:A (2.1) BS03 VWS 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13    		 GO:0003968 ... Q6YMS4 23408636 MOAD: Kd=225uM
    PDBbind: -logKd/Ki=3.65, Kd=225uM
    11240 3vws:A (2.1) BS04 VWS 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13    		 GO:0003968 ... Q6YMS4 23408636 MOAD: Kd=225uM
    PDBbind: -logKd/Ki=3.65, Kd=225uM
    11241 3vx3:A (2.1) BS01 ADP ? GO:0005524 ... Q5JIH4 23399544 PDBbind: -logKd/Ki=7.82, Kd=15nM
    11242 3vx3:A (2.1) BS02 ADP ? GO:0005524 ... Q5JIH4 23399544 PDBbind: -logKd/Ki=7.82, Kd=15nM
    11243 3vx3:B (2.1) BS01 ADP ? GO:0005524 ... Q5JIH4 23399544 PDBbind: -logKd/Ki=7.82, Kd=15nM
    11244 3vx3:B (2.1) BS02 ADP ? GO:0005524 ... Q5JIH4 23399544 PDBbind: -logKd/Ki=7.82, Kd=15nM
    11245 3vxv:A (2.0) BS01 dna 3.2.2.- GO:0003677 ... Q9Z2D7 23316048 PDBbind: Kd=98.8nM
    11246 3vxv:A (2.0) BS02 dna 3.2.2.- GO:0003677 ... Q9Z2D7 23316048 PDBbind: Kd=98.8nM
    11247 3vxx:A (2.204) BS01 dna 3.2.2.- GO:0003677 ... Q9Z2D7 23316048 PDBbind: Kd=97.5nM
    11248 3vxx:A (2.204) BS02 dna 3.2.2.- GO:0003677 ... Q9Z2D7 23316048 PDBbind: Kd=97.5nM
    11249 3vyb:A (2.4) BS01 dna 3.2.2.- GO:0003677 ... Q9Z2D7 23316048 PDBbind: Kd=162nM
    11250 3vyb:A (2.4) BS02 dna 3.2.2.- GO:0003677 ... Q9Z2D7 23316048 PDBbind: Kd=162nM
    11251 3vyd:A (2.81) BS01 VYD 3.4.23.15 GO:0004190 ... P00797 23122821 PDBbind: -logKd/Ki=6.39, IC50=406nM
    BindingDB: IC50=406nM
    11252 3vye:A (2.7) BS01 VYE 3.4.23.15 GO:0004190 ... P00797 23122821 PDBbind: -logKd/Ki=8.11, IC50=7.7nM
    BindingDB: IC50=7.7nM
    11253 3vyf:A (2.8) BS01 VYF 3.4.23.15 GO:0004190 ... P00797 23122821 PDBbind: -logKd/Ki=8.80, IC50=1.6nM
    BindingDB: IC50=1.6nM
    11254 3vzd:A (2.3) BS01 UUL 2.3.1.-
    2.7.1.91    		 GO:0000287 ... Q9NYA1 23602659 PDBbind: -logKd/Ki=6.30, IC50~0.5uM
    BindingDB: Ki=16000nM, IC50=35000nM
    11255 3vzd:A (2.3) BS02 UUL 2.3.1.-
    2.7.1.91    		 GO:0000287 ... Q9NYA1 23602659 PDBbind: -logKd/Ki=6.30, IC50~0.5uM
    BindingDB: Ki=16000nM, IC50=35000nM
    11256 3vzg:A (2.7) BS01 MAN ? GO:0005515 ... O60844 24790092 PDBbind: -logKd/Ki=1.72, Kd=19mM
    11257 3vzv:A (2.8) BS01 VZV 2.3.2.27 GO:0005634 ... Q00987 23266121 PDBbind: -logKd/Ki=8.04, IC50=9.2nM
    11258 3w07:A (1.03) BS01 U5P 4.1.1.23 GO:0004590 ... O26232 23395822 MOAD: Kd=0.00042M
    PDBbind: -logKd/Ki=3.38, Kd=0.42mM
    11259 3w0l:B (2.92) BS01 F6R ? GO:0004857 ... Q91754 23733961 PDBbind: -logKd/Ki=7.02, Kd=95nM
    11260 3w1f:A (2.7) BS01 1O5 2.7.12.1 GO:0004672 ... P33981 23634759 PDBbind: -logKd/Ki=8.44, IC50=3.67nM
    BindingDB: IC50=198nM
    11261 3w1k:A (7.5) BS01 rna 2.9.1.1 GO:0001514 ... O67140 23559248 PDBbind: Kd=75nM
    11262 3w1k:B (7.5) BS01 rna 2.9.1.1 GO:0001514 ... O67140 23559248 PDBbind: Kd=75nM
    11263 3w1k:C (7.5) BS01 rna 2.9.1.1 GO:0001514 ... O67140 23559248 PDBbind: Kd=75nM
    11264 3w1k:C (7.5) BS02 rna 2.9.1.1 GO:0001514 ... O67140 23559248 PDBbind: Kd=75nM
    11265 3w1k:C (7.5) BS03 rna 2.9.1.1 GO:0001514 ... O67140 23559248 PDBbind: Kd=75nM
    11266 3w1k:D (7.5) BS01 rna 2.9.1.1 GO:0001514 ... O67140 23559248 PDBbind: Kd=75nM
    11267 3w1k:E (7.5) BS01 rna 2.9.1.1 GO:0001514 ... O67140 23559248 PDBbind: Kd=75nM
    11268 3w2o:A (2.35) BS01 03P 2.7.10.1 GO:0004672 ... P00533 24900643 PDBbind: -logKd/Ki=5.08, IC50=8400nM
    BindingDB: IC50=4.0nM
    11269 3w2p:A (2.05) BS01 W2P 2.7.10.1 GO:0004672 ... P00533 24900643 PDBbind: -logKd/Ki=5.09, IC50=8100nM
    11270 3w2q:A (2.2) BS01 HKI 2.7.10.1 GO:0004672 ... P00533 24900643 PDBbind: -logKd/Ki=7.18, IC50=66nM
    11271 3w2r:A (2.05) BS01 W2R 2.7.10.1 GO:0004672 ... P00533 24900643 PDBbind: -logKd/Ki=7.72, IC50=19nM
    BindingDB: IC50=6.9nM
    11272 3w2s:A (1.9) BS01 W2R 2.7.10.1 GO:0004672 ... P00533 24900643 PDBbind: -logKd/Ki=8.16, IC50=6.9nM
    BindingDB: IC50=6.9nM
    11273 3w2t:A (2.36) BS01 LF7 3.4.14.5 GO:0001618 ... P27487 23501107 PDBbind: -logKd/Ki=7.53, IC50=29.2nM
    BindingDB: IC50=3.5nM
    11274 3w32:A (1.8) BS01 W32 2.7.10.1 GO:0004672 ... P00533 23490150 MOAD: ic50=75nM
    PDBbind: -logKd/Ki=7.12, IC50=75nM
    BindingDB: IC50=75nM
    11275 3w33:A (1.7) BS01 W19 2.7.10.1 GO:0004672 ... P00533 23490150 MOAD: ic50=36nM
    PDBbind: -logKd/Ki=7.44, IC50=36nM
    BindingDB: IC50=36nM
    11276 3w3c:A (2.431) BS01 dna ? GO:0003677 ... P0A247 23985969 PDBbind: Kd=16nM
    11277 3w3c:A (2.431) BS02 dna ? GO:0003677 ... P0A247 23985969 PDBbind: Kd=16nM
    11278 3w54:A (2.3) BS03 RNB 1.-.-.- GO:0005739 ... Q26710 23487766 MOAD: ic50=0.2nM
    PDBbind: -logKd/Ki=9.70, IC50=0.2nM
    BindingDB: IC50=4.0nM
    11279 3w55:A (3.0) BS01 1FM 2.7.11.24 GO:0000165 ... P28482 17194451 PDBbind: -logKd/Ki=7.10, IC50=0.08uM
    BindingDB: IC50=738nM
    11280 3w5e:A (2.3) BS01 NVW 3.1.4.53 GO:0004114 ... Q07343 23602400 MOAD: ic50=11nM
    PDBbind: -logKd/Ki=7.96, IC50=11nM
    BindingDB: IC50=11nM
    11281 3w5t:A (2.29) BS02 LHP ? GO:0003677 ... P13053 23723390 PDBbind: -logKd/Ki=4.52, IC50=30uM
    11282 3w69:A (1.9) BS01 LTZ 2.3.2.27 GO:0005634 ... Q00987 23685175 MOAD: ic50=0.058uM
    PDBbind: -logKd/Ki=7.24, IC50=58nM
    11283 3w6v:A (2.95) BS01 dna ? GO:0003700 ... Q9S166 24019524 PDBbind: Kd=2uM
    11284 3w6v:A (2.95) BS02 dna ? GO:0003700 ... Q9S166 24019524 PDBbind: Kd=2uM
    11285 3w8o:A (1.85) BS01 WPC ? GO:0046872 ... G3XD33 24604808 PDBbind: -logKd/Ki=7.62, IC50=24nM
    11286 3w9k:A (1.8) BS01 MYR ? N/A Q973T5 23836863 MOAD: Kd=0.48uM
    PDBbind: -logKd/Ki=6.32, Kd=0.48uM
    11287 3w9r:A (1.9) BS01 A8S ? GO:0004864 ... Q84MC7 24645846 MOAD: Kd=0.66uM
    PDBbind: -logKd/Ki=6.18, Kd=0.66uM
    11288 3wab:A (2.154) BS03 DDW 3.4.17.2 GO:0004181 ... P09955 24010887 PDBbind: -logKd/Ki=7.47, IC50=34nM
    BindingDB: IC50=3.6nM
    11289 3wav:A (1.797) BS05 DWV 3.1.4.39 GO:0003676 ... Q9R1E6 23688339 MOAD: ic50=180nM
    PDBbind: -logKd/Ki=6.74, IC50=180nM
    BindingDB: IC50=180nM
    11290 3waw:A (1.954) BS05 DWW 3.1.4.39 GO:0003676 ... Q9R1E6 23688339 MOAD: ic50=580nM
    PDBbind: -logKd/Ki=6.24, IC50=580nM
    BindingDB: IC50=580nM
    11291 3wax:A (1.899) BS05 DWX 3.1.4.39 GO:0003676 ... Q9R1E6 23688339 MOAD: ic50=13nM
    PDBbind: -logKd/Ki=7.89, IC50=13nM
    BindingDB: IC50=13nM
    11292 3way:A (1.746) BS05 DWY 3.1.4.39 GO:0003676 ... Q9R1E6 23688339 PDBbind: -logKd/Ki=7.66, IC50=22nM
    BindingDB: IC50=22nM
    11293 3wb4:A (2.25) BS01 0B3 3.4.23.46 GO:0004190 ... P56817 24051074 MOAD: Kd=36.6uM
    PDBbind: -logKd/Ki=4.44, Kd=36.6uM
    BindingDB: IC50=34000nM
    11294 3wb5:A (2.501) BS01 0B4 3.4.23.46 GO:0004190 ... P56817 24051074 MOAD: Kd=26.8uM
    PDBbind: -logKd/Ki=4.57, Kd=26.8uM
    11295 3wbl:A (2.0) BS01 PDY 2.7.11.22 GO:0000082 ... P24941 24121337 MOAD: ic50=23uM
    PDBbind: -logKd/Ki=4.64, IC50=23uM
    BindingDB: IC50=23000nM
    11296 3wc5:A (1.7) BS03 DDK 3.4.17.2 GO:0004181 ... P09955 24010887 PDBbind: -logKd/Ki=8.70, IC50=2.0nM
    11297 3wc7:A (1.9) BS03 EF1 3.4.17.2 GO:0004181 ... P09955 24010887 PDBbind: -logKd/Ki=8.26, IC50=5.5nM
    BindingDB: IC50=4.9nM
    11298 3wcb:A (3.0) BS01 8PH 2.5.1.21 GO:0004310 ... Q4CWB4 24789335 PDBbind: -logKd/Ki=7.74, IC50=0.018uM
    11299 3wcf:A (2.22) BS01 BH8 2.5.1.21 GO:0004310 ... P37268 24789335 MOAD: ic50=0.053uM
    PDBbind: -logKd/Ki=7.28, IC50=0.053uM
    11300 3wcg:A (2.8) BS01 BH3 2.5.1.21 GO:0004310 ... Q4CWB4 24789335 PDBbind: -logKd/Ki=6.85, IC50=0.14uM
    11301 3wch:A (2.5) BS01 8PH 2.5.1.21 GO:0004310 ... P37268 24789335 MOAD: ic50=0.089uM
    PDBbind: -logKd/Ki=7.05, IC50=0.089uM
    11302 3wch:A (2.5) BS02 8PH 2.5.1.21 GO:0004310 ... P37268 24789335 MOAD: ic50=0.089uM
    PDBbind: -logKd/Ki=7.05, IC50=0.089uM
    11303 3wch:A (2.5) BS03 8PH 2.5.1.21 GO:0004310 ... P37268 24789335 MOAD: ic50=0.089uM
    PDBbind: -logKd/Ki=7.05, IC50=0.089uM
    11304 3wci:A (2.3) BS01 BH5 2.5.1.21 GO:0004310 ... P37268 24789335 MOAD: ic50=0.27uM
    PDBbind: -logKd/Ki=6.57, IC50=0.27uM
    11305 3wci:C (2.3) BS01 BH5 2.5.1.21 GO:0004310 ... P37268 24789335 MOAD: ic50=0.27uM
    PDBbind: -logKd/Ki=6.57, IC50=0.27uM
    11306 3wcl:A (2.24) BS01 BH3 2.5.1.21 GO:0004310 ... P37268 24789335 MOAD: ic50=0.26uM
    PDBbind: -logKd/Ki=6.59, IC50=0.26uM
    11307 3wd1:A (2.3) BS01 ST7 3.2.1.14 GO:0004553 ... P11797 24043811 MOAD: ic50=0.022uM
    PDBbind: -logKd/Ki=7.66, IC50=22nM
    BindingDB: IC50=22nM
    11308 3wd2:A (2.2) BS01 A1L 3.2.1.14 GO:0004553 ... P11797 24043811 MOAD: ic50=0.58uM
    PDBbind: -logKd/Ki=6.24, IC50=0.58uM
    11309 3wd9:A (2.5) BS01 QPC 3.1.4.53 GO:0004114 ... Q07343 24094436 MOAD: ic50=8.3nM
    PDBbind: -logKd/Ki=8.08, IC50=8.3nM
    BindingDB: IC50=8.3nM
    11310 3we4:A (1.995) BS02 5FI 2.7.11.1 GO:0004672 ... P23443 25078151 MOAD: ic50=15nM
    PDBbind: -logKd/Ki=7.82, IC50=15nM
    BindingDB: Ki=20nM, IC50=160nM
    11311 3wf5:A (2.099) BS02 FZ8 2.7.11.1 GO:0004672 ... P23443 25078151 MOAD: ic50=81nM
    PDBbind: -logKd/Ki=7.09, IC50=81nM
    11312 3wf6:A (2.031) BS02 FZ9 2.7.11.1 GO:0004672 ... P23443 25078151 MOAD: ic50=33nM
    PDBbind: -logKd/Ki=7.48, IC50=33nM
    11313 3wf7:A (1.85) BS02 FS9 2.7.11.1 GO:0004672 ... P23443 25078151 MOAD: ic50=206nM
    PDBbind: -logKd/Ki=6.69, IC50=206nM
    11314 3wf8:A (1.975) BS02 F76 2.7.11.1 GO:0004672 ... P23443 25078151 MOAD: ic50=232nM
    PDBbind: -logKd/Ki=6.63, IC50=232nM
    11315 3wf9:A (2.035) BS02 FS7 2.7.11.1 GO:0004672 ... P23443 25078151 MOAD: ic50=567nM
    PDBbind: -logKd/Ki=6.25, IC50=567nM
    11316 3wff:A (2.05) BS01 WFF ? N/A P08235 23958516 PDBbind: -logKd/Ki=6.18, IC50=660nM
    BindingDB: IC50=660nM
    11317 3wfg:A (1.4) BS01 WFG ? N/A P08235 23958516 PDBbind: -logKd/Ki=6.92, IC50=120nM
    BindingDB: IC50=120nM
    11318 3wgg:A (2.1) BS01 8NA ? GO:0000166 ... D5KM69 25527330 PDBbind: -logKd/Ki=4.40, Kd=39.9uM
    11319 3wgg:A (2.1) BS05 8NA ? GO:0000166 ... D5KM69 25527330 PDBbind: -logKd/Ki=4.40, Kd=39.9uM
    11320 3wgg:B (2.1) BS01 8NA ? GO:0000166 ... D5KM69 25527330 PDBbind: -logKd/Ki=4.40, Kd=39.9uM
    11321 3wgg:B (2.1) BS03 8NA ? GO:0000166 ... D5KM69 25527330 PDBbind: -logKd/Ki=4.40, Kd=39.9uM
    11322 3wgw:A (2.8) BS01 T2B ? GO:0000122 ... P12004 24474685 PDBbind: -logKd/Ki=5.89, IC50=1.3uM
    BindingDB: IC50=1300nM
    11323 3wgw:A (2.8) BS02 T2B ? GO:0000122 ... P12004 24474685 PDBbind: -logKd/Ki=5.89, IC50=1.3uM
    BindingDB: IC50=1300nM
    11324 3wha:A (1.3) BS01 WHA 3.6.4.10 GO:0005524 ... P07900 24369839 MOAD: Kd=0.48nM
    PDBbind: -logKd/Ki=9.32, Kd=0.48nM
    BindingDB: Kd=0.480000nM
    11325 3whw:A (2.701) BS01 RUX 3.6.1.-
    3.6.1.56    		 GO:0001669 ... P36639 24258965 PDBbind: -logKd/Ki=8.22, IC50=6nM
    11326 3wi2:A (2.26) BS02 P98 3.1.4.17 GO:0004114 ... Q9Y233 24238902 MOAD: ic50=92nM
    PDBbind: -logKd/Ki=7.04, IC50=92nM
    11327 3wi6:A (2.99) BS01 YRZ 2.7.11.1 GO:0004672 ... P49137 24316826 PDBbind: -logKd/Ki=5.33, IC50=4.7uM
    11328 3wig:A (2.7) BS03 CHU 2.7.12.2 GO:0004672 ... Q02750 24746704 PDBbind: -logKd/Ki=8.64, Kd=2.30nM
    11329 3wix:A (1.9) BS01 LC3 ? GO:0042981 ... Q07820 24215352 MOAD: ic50=0.54uM
    PDBbind: -logKd/Ki=6.27, IC50=0.54uM
    BindingDB: IC50=540nM
    11330 3wix:A (1.9) BS02 LC3 ? GO:0042981 ... Q07820 24215352 MOAD: ic50=0.54uM
    PDBbind: -logKd/Ki=6.27, IC50=0.54uM
    BindingDB: IC50=540nM
    11331 3wiy:A (2.15) BS01 LC6 ? GO:0042981 ... Q07820 24215352 MOAD: ic50=0.61uM
    PDBbind: -logKd/Ki=6.21, IC50=0.61uM
    BindingDB: IC50=610nM
    11332 3wiz:A (2.45) BS01 LC6 ? GO:0042981 ... Q07817 24215352 MOAD: ic50=0.0044uM
    PDBbind: -logKd/Ki=8.36, IC50=4.4nM
    BindingDB: IC50=4.4nM
    11333 3wiz:B (2.45) BS01 LC6 ? GO:0042981 ... Q07817 24215352 MOAD: ic50=0.0044uM
    PDBbind: -logKd/Ki=8.36, IC50=4.4nM
    BindingDB: IC50=4.4nM
    11334 3wjw:A (1.59) BS01 U6M 4.1.1.23 GO:0004590 ... O26232 24151964 MOAD: Ki=134uM
    PDBbind: -logKd/Ki=3.87, Ki=134uM
    BindingDB: Ki=134000nM
    11335 3wk4:A (2.11) BS02 S0A 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 24656800 MOAD: ic50=7.4uM
    PDBbind: -logKd/Ki=5.13, IC50=7.4uM
    BindingDB: IC50=7400nM
    11336 3wk5:A (2.77) BS02 S0C 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 24656800 PDBbind: -logKd/Ki=4.82, IC50=15uM
    BindingDB: IC50=15000nM
    11337 3wk6:A (2.1) BS02 S0B 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 24656800 MOAD: ic50=6.3uM
    PDBbind: -logKd/Ki=5.20, IC50=6.3uM
    BindingDB: IC50=6300nM
    11338 3wk7:A (2.2) BS02 S0D 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 24656800 MOAD: ic50=127uM
    PDBbind: -logKd/Ki=3.90, IC50=127uM
    BindingDB: IC50=127000nM
    11339 3wk8:A (2.2) BS02 S0E 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 24656800 MOAD: ic50=49uM
    PDBbind: -logKd/Ki=4.31, IC50=49uM
    BindingDB: IC50=49000nM
    11340 3wk9:A (2.2) BS02 S0F 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 24656800 MOAD: ic50=70uM
    PDBbind: -logKd/Ki=4.15, IC50=70uM
    BindingDB: IC50=70000nM
    11341 3wka:A (2.01) BS02 S0G 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 24656800 MOAD: ic50=29uM
    PDBbind: -logKd/Ki=4.54, IC50=29uM
    BindingDB: IC50=29000nM
    11342 3wkb:A (2.2) BS02 S0I 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 24656800 MOAD: ic50=61uM
    PDBbind: -logKd/Ki=4.21, IC50=61uM
    BindingDB: IC50=61000nM
    11343 3wkc:A (2.2) BS02 S0J 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 24656800 MOAD: ic50=195uM
    PDBbind: -logKd/Ki=3.71, IC50=195uM
    BindingDB: IC50=195000nM
    11344 3wkd:A (2.48) BS02 S0K 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 24656800 MOAD: ic50=171uM
    PDBbind: -logKd/Ki=3.77, IC50=171uM
    BindingDB: IC50=171000nM
    11345 3wke:A (2.75) BS02 AUB 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 24656800 PDBbind: -logKd/Ki=8.89, IC50=1.3nM
    BindingDB: IC50=1.5nM, Ki=1.5nM
    11346 3wmb:A (2.7) BS01 NF1 3.2.1.52 GO:0000272 ... Q06GJ0 25155420 PDBbind: -logKd/Ki=5.37, Ki=4.28uM
    11347 3wmc:A (2.095) BS01 NF6 3.2.1.52 GO:0000272 ... Q06GJ0 25155420 MOAD: Ki=0.31uM
    PDBbind: -logKd/Ki=6.51, Ki=0.31uM
    11348 3wnr:A (2.008) BS01 9BE 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 25743213 PDBbind: -logKd/Ki=6.28, IC50=0.53uM
    11349 3wnr:A (2.008) BS02 9BE 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 25743213 PDBbind: -logKd/Ki=6.28, IC50=0.53uM
    11350 3wnr:C (2.008) BS01 9BE 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 25743213 PDBbind: -logKd/Ki=6.28, IC50=0.53uM
    11351 3wns:A (1.658) BS01 9AI 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 25743213 PDBbind: -logKd/Ki=5.96, IC50=1.1uM
    11352 3wns:C (1.658) BS01 9AI 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 25743213 PDBbind: -logKd/Ki=5.96, IC50=1.1uM
    11353 3wnt:A (2.074) BS01 9BE 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 25743213 PDBbind: -logKd/Ki=6.28, IC50=0.53uM
    11354 3wnt:C (2.074) BS01 9BE 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 25743213 PDBbind: -logKd/Ki=6.28, IC50=0.53uM
    11355 3wpc:A (1.6) BS01 dna ? GO:0002224 ... Q2EEY0 25686612 PDBbind: Kd=20nM
    11356 3wpc:A (1.6) BS02 dna ? GO:0002224 ... Q2EEY0 25686612 PDBbind: Kd=20nM
    11357 3wpc:B (1.6) BS01 dna ? GO:0002224 ... Q2EEY0 25686612 PDBbind: Kd=20nM
    11358 3wpc:B (1.6) BS02 dna ? GO:0002224 ... Q2EEY0 25686612 PDBbind: Kd=20nM
    11359 3wpd:A (2.75) BS01 dna ? GO:0002224 ... Q2EEY0 25686612 PDBbind: Kd=3nM
    11360 3wpn:A (2.8) BS01 B4S ? GO:0003777 ... P52732 25622007 PDBbind: -logKd/Ki=4.36, IC50=44uM
    BindingDB: IC50=120nM
    11361 3wq5:A (1.8) BS01 VPA 3.2.1.149 GO:0004553 ... Q7X9A9 24753293 PDBbind: -logKd/Ki=3.85, Ki=140uM
    11362 3wq5:A (1.8) BS02 VPA 3.2.1.149 GO:0004553 ... Q7X9A9 24753293 PDBbind: -logKd/Ki=3.85, Ki=140uM
    11363 3wq6:A (1.8) BS01 ZPA 3.2.1.149 GO:0004553 ... Q7X9A9 24753293 PDBbind: -logKd/Ki=4.59, Ki=26uM
    11364 3wqh:A (2.85) BS01 SKK 3.4.14.5 GO:0001618 ... P27487 26147347 PDBbind: -logKd/Ki=8.48, IC50=3.3nM
    BindingDB: IC50=3.8nM
    11365 3wqm:A (2.1) BS01 B29 2.5.1.153 GO:0016102 ... P9WJ61 24475925 MOAD: Kd=560nM
    PDBbind: -logKd/Ki=6.25, Kd=560nM
    11366 3wqm:A (2.1) BS02 B29 2.5.1.153 GO:0016102 ... P9WJ61 24475925 MOAD: Kd=560nM
    PDBbind: -logKd/Ki=6.25, Kd=560nM
    11367 3wqv:A (2.043) BS01 GCS 3.2.1.14 GO:0004553 ... Q2V6H4 24828498 PDBbind: -logKd/Ki=5.21, Kd=6.2uM
    11368 3wqv:A (2.043) BS02 GCS 3.2.1.14 GO:0004553 ... Q2V6H4 24828498 PDBbind: -logKd/Ki=5.21, Kd=6.2uM
    11369 3wqw:A (2.0) BS01 GCS 3.2.1.14 GO:0004553 ... Q2V6H4 24828498 PDBbind: -logKd/Ki=5.23, Kd=5.9uM
    11370 3wqw:A (2.0) BS02 GCS 3.2.1.14 GO:0004553 ... Q2V6H4 24828498 PDBbind: -logKd/Ki=5.23, Kd=5.9uM
    11371 3ws8:A (2.6) BS02 X4C 3.1.4.17 GO:0004114 ... Q9Y233 24837154 PDBbind: -logKd/Ki=6.68, IC50=210nM
    BindingDB: IC50=210nM
    11372 3ws9:A (2.99) BS02 X4D 3.1.4.17 GO:0004114 ... Q9Y233 24837154 PDBbind: -logKd/Ki=7.04, IC50=92nM
    BindingDB: IC50=92nM
    11373 3wt5:A (1.9) BS02 YA1 ? GO:0003677 ... P13053 24742174 MOAD: ic50=0.29nM
    PDBbind: -logKd/Ki=9.54, IC50=0.29nM
    11374 3wt7:A (2.4) BS02 YA2 ? GO:0003677 ... P13053 24742174 MOAD: ic50=1.79nM
    PDBbind: -logKd/Ki=8.75, IC50=1.79nM
    11375 3wth:A (2.54) BS01 IM4 ? GO:0004888 ... P58154 25267717 PDBbind: -logKd/Ki=6.29, Kd=0.514uM
    BindingDB: Ki=970nM
    11376 3wth:A (2.54) BS02 IM4 ? GO:0004888 ... P58154 25267717 PDBbind: -logKd/Ki=6.29, Kd=0.514uM
    BindingDB: Ki=970nM
    11377 3wth:B (2.54) BS01 IM4 ? GO:0004888 ... P58154 25267717 PDBbind: -logKd/Ki=6.29, Kd=0.514uM
    BindingDB: Ki=970nM
    11378 3wth:B (2.54) BS02 IM4 ? GO:0004888 ... P58154 25267717 PDBbind: -logKd/Ki=6.29, Kd=0.514uM
    BindingDB: Ki=970nM
    11379 3wti:A (2.68) BS01 CT4 ? GO:0004888 ... P58154 25267717 PDBbind: -logKd/Ki=5.90, Kd=1.27uM
    11380 3wti:A (2.68) BS02 CT4 ? GO:0004888 ... P58154 25267717 PDBbind: -logKd/Ki=5.90, Kd=1.27uM
    11381 3wti:B (2.68) BS01 CT4 ? GO:0004888 ... P58154 25267717 PDBbind: -logKd/Ki=5.90, Kd=1.27uM
    11382 3wti:B (2.68) BS02 CT4 ? GO:0004888 ... P58154 25267717 PDBbind: -logKd/Ki=5.90, Kd=1.27uM
    11383 3wtj:A (2.24) BS01 TH4 ? GO:0004888 ... P58154 25267717 MOAD: Kd=0.297uM
    PDBbind: -logKd/Ki=6.53, Kd=0.297uM
    BindingDB: Ki=220nM
    11384 3wtj:A (2.24) BS02 TH4 ? GO:0004888 ... P58154 25267717 MOAD: Kd=0.297uM
    PDBbind: -logKd/Ki=6.53, Kd=0.297uM
    BindingDB: Ki=220nM
    11385 3wtj:B (2.24) BS01 TH4 ? GO:0004888 ... P58154 25267717 MOAD: Kd=0.297uM
    PDBbind: -logKd/Ki=6.53, Kd=0.297uM
    BindingDB: Ki=220nM
    11386 3wtj:B (2.24) BS02 TH4 ? GO:0004888 ... P58154 25267717 MOAD: Kd=0.297uM
    PDBbind: -logKd/Ki=6.53, Kd=0.297uM
    BindingDB: Ki=220nM
    11387 3wtk:A (2.69) BS01 TH4 ? GO:0004888 ... P58154 25267717 PDBbind: -logKd/Ki=6.53, Kd=0.294uM
    BindingDB: Ki=220nM
    11388 3wtk:A (2.69) BS02 TH4 ? GO:0004888 ... P58154 25267717 PDBbind: -logKd/Ki=6.53, Kd=0.294uM
    BindingDB: Ki=220nM
    11389 3wtk:E (2.69) BS01 TH4 ? GO:0004888 ... P58154 25267717 PDBbind: -logKd/Ki=6.53, Kd=0.294uM
    BindingDB: Ki=220nM
    11390 3wtk:E (2.69) BS02 TH4 ? GO:0004888 ... P58154 25267717 PDBbind: -logKd/Ki=6.53, Kd=0.294uM
    BindingDB: Ki=220nM
    11391 3wtl:A (2.3) BS01 N1Y ? GO:0004888 ... P58154 25267717 MOAD: Kd=0.092uM
    PDBbind: -logKd/Ki=7.04, Kd=0.092uM
    BindingDB: Ki=80nM
    11392 3wtl:A (2.3) BS02 N1Y ? GO:0004888 ... P58154 25267717 MOAD: Kd=0.092uM
    PDBbind: -logKd/Ki=7.04, Kd=0.092uM
    BindingDB: Ki=80nM
    11393 3wtl:B (2.3) BS01 N1Y ? GO:0004888 ... P58154 25267717 MOAD: Kd=0.092uM
    PDBbind: -logKd/Ki=7.04, Kd=0.092uM
    BindingDB: Ki=80nM
    11394 3wtl:B (2.3) BS02 N1Y ? GO:0004888 ... P58154 25267717 MOAD: Kd=0.092uM
    PDBbind: -logKd/Ki=7.04, Kd=0.092uM
    BindingDB: Ki=80nM
    11395 3wtm:A (2.48) BS01 N1Y ? GO:0004888 ... P58154 25267717 MOAD: Kd=0.1uM
    PDBbind: -logKd/Ki=7.00, Kd=0.100uM
    BindingDB: Ki=80nM
    11396 3wtm:A (2.48) BS02 N1Y ? GO:0004888 ... P58154 25267717 MOAD: Kd=0.1uM
    PDBbind: -logKd/Ki=7.00, Kd=0.100uM
    BindingDB: Ki=80nM
    11397 3wtm:E (2.48) BS01 N1Y ? GO:0004888 ... P58154 25267717 MOAD: Kd=0.1uM
    PDBbind: -logKd/Ki=7.00, Kd=0.100uM
    BindingDB: Ki=80nM
    11398 3wtm:E (2.48) BS02 N1Y ? GO:0004888 ... P58154 25267717 MOAD: Kd=0.1uM
    PDBbind: -logKd/Ki=7.00, Kd=0.100uM
    BindingDB: Ki=80nM
    11399 3wtn:A (2.09) BS01 N2Y ? GO:0004888 ... P58154 25267717 MOAD: Kd=0.091uM
    PDBbind: -logKd/Ki=7.04, Kd=0.091uM
    11400 3wtn:A (2.09) BS02 N2Y ? GO:0004888 ... P58154 25267717 MOAD: Kd=0.091uM
    PDBbind: -logKd/Ki=7.04, Kd=0.091uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218