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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    10601 3sk2:A (1.01) BS01 GRI ? GO:0042803 ... Q8GPH6 21849072 MOAD: Kd=244uM
    PDBbind: -logKd/Ki=3.61, Kd=244uM
    10602 3sk2:B (1.01) BS01 GRI ? GO:0042803 ... Q8GPH6 21849072 PDBbind: -logKd/Ki=3.61, Kd=244uM
    10603 3ska:A (1.73) BS01 053 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 21840715 MOAD: ic50=0.017uM
    PDBbind: -logKd/Ki=7.49, IC50=32nM
    10604 3skc:A (3.2) BS01 BR2 2.7.11.1 GO:0004672 ... P15056 21802293 PDBbind: -logKd/Ki=8.80, IC50=1.6nM
    10605 3ske:A (1.97) BS01 054 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 21840715 MOAD: ic50=0.032uM
    PDBbind: -logKd/Ki=7.77, IC50=17nM
    10606 3skf:A (3.0) BS01 PB7 3.4.23.46 GO:0004190 ... P56817 21974952 PDBbind: -logKd/Ki=8.30, IC50=5nM
    10607 3skg:A (2.88) BS01 PB8 3.4.23.46 GO:0004190 ... P56817 21974952 PDBbind: -logKd/Ki=8.10, IC50=8nM
    BindingDB: IC50=9.5nM
    10608 3skh:A (2.5) BS01 058 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 21840715 MOAD: ic50=0.9uM
    PDBbind: -logKd/Ki=6.05, IC50=0.9uM
    10609 3skk:A (1.701) BS03 4U7 3.5.3.1 GO:0000050 ... P05089 21728378 PDBbind: -logKd/Ki=4.47, Kd=34uM
    10610 3sl0:A (1.997) BS03 FB5 3.5.3.1 GO:0000050 ... Q8I384 21728378 PDBbind: -logKd/Ki=2.70, Ki=2mM
    10611 3sl1:A (1.902) BS03 FB6 3.5.3.1 GO:0000050 ... Q8I384 21728378 PDBbind: -logKd/Ki=3.59, Kd=260uM
    10612 3sl4:A (1.9) BS02 JN4 3.1.4.53 GO:0004114 ... Q08499 22030030 MOAD: ic50=0.027uM
    PDBbind: -logKd/Ki=7.57, IC50=27nM
    10613 3sl5:A (2.65) BS02 J25 3.1.4.53 GO:0004114 ... Q08499 22030030 PDBbind: -logKd/Ki=7.66, IC50=22nM
    BindingDB: IC50=22nM
    10614 3sl8:A (2.6) BS02 JN7 3.1.4.53 GO:0004114 ... Q08499 22030030 PDBbind: -logKd/Ki=6.54, IC50=0.29uM
    10615 3slz:A (1.4) BS01 3TL ? GO:0004190 ... Q9E7M1 21951660 MOAD: Ki=102nM
    PDBbind: -logKd/Ki=6.99, Ki=102nM
    10616 3slz:B (1.4) BS01 3TL ? GO:0004190 ... Q9E7M1 21951660 PDBbind: -logKd/Ki=6.99, Ki=102nM
    10617 3sm0:A (1.57) BS02 AEK 2.4.2.29 GO:0002099 ... P28720 22736391 MOAD: Ki=740nM
    PDBbind: -logKd/Ki=6.13, Ki=740nM
    10618 3sm2:A (1.75) BS01 478 ? GO:0004190 ... Q9E7M1 21951660 MOAD: Ki=0.2nM
    PDBbind: -logKd/Ki=9.70, Ki=0.2nM
    10619 3sm2:B (1.75) BS01 478 ? GO:0004190 ... Q9E7M1 21951660 PDBbind: -logKd/Ki=9.70, Ki=0.2nM
    10620 3smq:A (2.0) BS01 TDU 2.1.1.319 GO:0016274 ... O60678 22795084 PDBbind: -logKd/Ki=5.02, Kd=9.5uM
    BindingDB: IC50=2500nM
    10621 3sn7:A (1.82) BS01 540 3.1.4.17 GO:0004114 ... Q9Y233 21988093 MOAD: ic50=0.7nM
    PDBbind: -logKd/Ki=9.15, IC50=0.7nM
    BindingDB: IC50=0.700000nM
    10622 3sn8:A (1.99) BS01 S89 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69    		 GO:0008233 ... P0C6U8 21854807 PDBbind: -logKd/Ki=5.65, Ki=2.24uM
    10623 3sni:A (1.9) BS02 546 3.1.4.17 GO:0004114 ... Q9Y233 21988093 MOAD: ic50=11nM
    PDBbind: -logKd/Ki=7.96, IC50=11nM
    BindingDB: IC50=11nM
    10624 3snl:B (2.4) BS02 548 3.1.4.17 GO:0004114 ... Q9Y233 21988093 MOAD: ic50=0.7nM
    PDBbind: -logKd/Ki=9.15, IC50=0.7nM
    BindingDB: IC50=0.700000nM
    10625 3so9:A (2.87) BS01 017 3.1.26.13 GO:0004190 ... Q000H7 21871444 PDBbind: -logKd/Ki=8.56, IC50=2.76nM
    10626 3so9:B (2.87) BS01 017 3.1.26.13 GO:0004190 ... Q000H7 21871444 PDBbind: -logKd/Ki=8.56, IC50=2.76nM
    10627 3spf:A (1.7) BS01 B50 ? GO:0042981 ... Q07817 22448988 MOAD: Ki=138uM
    PDBbind: -logKd/Ki=3.86, Ki=138uM
    BindingDB: Ki=138000nM, IC50=453000nM
    10628 3spk:A (1.24) BS01 TPV 3.1.26.13 GO:0004190 ... Q000H7 21871444 MOAD: ic50=3.02nM
    PDBbind: -logKd/Ki=8.52, IC50=3.02nM
    10629 3spk:A (1.24) BS02 TPV 3.1.26.13 GO:0004190 ... Q000H7 21871444 MOAD: ic50=3.02nM
    PDBbind: -logKd/Ki=8.52, IC50=3.02nM
    10630 3spk:B (1.24) BS01 TPV 3.1.26.13 GO:0004190 ... Q000H7 21871444 MOAD: ic50=3.02nM
    PDBbind: -logKd/Ki=8.52, IC50=3.02nM
    10631 3spk:B (1.24) BS02 TPV 3.1.26.13 GO:0004190 ... Q000H7 21871444 MOAD: ic50=3.02nM
    PDBbind: -logKd/Ki=8.52, IC50=3.02nM
    10632 3sq2:A (2.1) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22023103 PDBbind: Kd=31.1uM
    10633 3sq2:A (2.1) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22023103 PDBbind: Kd=31.1uM
    10634 3sq4:A (2.23) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22023103 PDBbind: Kd=30uM
    10635 3sq4:A (2.23) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22023103 PDBbind: Kd=30uM
    10636 3sqq:A (1.85) BS01 99Z 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=5.32, IC50=4.8uM
    10637 3sr4:A (2.5) BS01 TT8 2.1.1.360 GO:0031151 ... Q8TEK3 21936531 MOAD: Ki=0.29uM
    PDBbind: -logKd/Ki=6.54, Ki=0.29uM
    BindingDB: Ki=290nM
    10638 3srb:A (1.8) BS01 28S 3.5.1.97 GO:0016787 ... Q9I194 21892836 PDBbind: -logKd/Ki=4.19, IC50=65uM
    10639 3srb:B (1.8) BS01 28S 3.5.1.97 GO:0016787 ... Q9I194 21892836 MOAD: ic50=65uM
    PDBbind: -logKd/Ki=4.19, IC50=65uM
    10640 3src:B (2.0) BS01 28N 3.5.1.97 GO:0016787 ... Q9I194 21892836 MOAD: ic50=130uM
    PDBbind: -logKd/Ki=3.89, IC50=130uM
    10641 3srg:A (2.19) BS03 OCH N/A GO:0004064 ... N/A 22387469 PDBbind: -logKd/Ki=5.70, Ki~2uM
    10642 3srv:A (1.95) BS01 S19 2.7.10.2 GO:0004672 ... P43405 21903390 MOAD: ic50=31.6nM
    PDBbind: -logKd/Ki=7.50, IC50=31.6nM
    BindingDB: IC50=32nM
    10643 3st5:A (1.45) BS01 G89 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 21800876 PDBbind: -logKd/Ki=11.30, Ki=5pM
    10644 3st5:B (1.45) BS01 G89 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 21800876 MOAD: Ki=5pM
    PDBbind: -logKd/Ki=11.30, Ki=5pM
    10645 3st6:A (1.75) BS01 RVE 4.2.99.21
    5.4.4.2
    5.4.99.5    		 GO:0000162 ... P9WFX1 22607697 MOAD: Ki=240uM
    PDBbind: -logKd/Ki=3.62, Ki=240uM
    10646 3std:A (1.65) BS01 MQ0 4.2.1.94 GO:0005575 ... P56221 9922139 MOAD: Ki=7.7pM
    PDBbind: -logKd/Ki=11.11, Ki=7.7pM
    10647 3std:B (1.65) BS02 MQ0 4.2.1.94 GO:0005575 ... P56221 9922139 MOAD: Ki=7.7pM
    PDBbind: -logKd/Ki=11.11, Ki=7.7pM
    10648 3str:P (1.75) BS01 3LI 3.5.1.88 GO:0006412 ... Q939R9 21711014 MOAD: Ki=334nM
    PDBbind: -logKd/Ki=8.40, Ki=3.96nM
    10649 3su0:A (1.159) BS01 TSV 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0006508 ... A8DG50 22910833 MOAD: Ki=162nM
    PDBbind: -logKd/Ki=6.79, Ki=162nM
    10650 3su1:A (1.399) BS01 TSV 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0006508 ... A8DG50 22910833 MOAD: Ki=208nM
    PDBbind: -logKd/Ki=6.68, Ki=208nM
    10651 3su2:A (1.496) BS01 TSV 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0006508 ... A8DG50 22910833 MOAD: Ki=44.8nM
    PDBbind: -logKd/Ki=7.35, Ki=44.8nM
    10652 3su3:A (1.3) BS01 SU3 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0006508 ... A8DG50 22910833 MOAD: Ki=0.74nM
    PDBbind: -logKd/Ki=9.13, Ki=0.74nM
    10653 3su4:A (2.255) BS01 SU3 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0006508 ... P26664 22910833 MOAD: Ki=554nM
    PDBbind: -logKd/Ki=6.26, Ki=554nM
    10654 3su5:A (1.55) BS01 SU3 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0006508 ... A8DG50 22910833 MOAD: Ki=2635nM
    PDBbind: -logKd/Ki=5.58, Ki=2635nM
    10655 3su6:A (1.1) BS01 SU3 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0006508 ... A8DG50 22910833 MOAD: Ki=958nM
    PDBbind: -logKd/Ki=6.02, Ki=958nM
    10656 3sud:A (1.96) BS01 SUE 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0006508 ... A8DG50 22910833 MOAD: Ki=0.14nM
    PDBbind: -logKd/Ki=9.85, Ki=0.14nM
    10657 3sue:A (2.2) BS01 SUE 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0006508 ... A8DG50 22910833 MOAD: Ki=0.84nM
    PDBbind: -logKd/Ki=9.08, Ki=0.84nM
    10658 3suf:A (2.19) BS01 SUE 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0006508 ... A8DG50 22910833 MOAD: Ki=27.8nM
    PDBbind: -logKd/Ki=7.56, Ki=27.8nM
    10659 3sug:A (1.8) BS01 SUE 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0006508 ... A8DG50 22910833 MOAD: Ki=620nM
    PDBbind: -logKd/Ki=6.21, Ki=620nM
    10660 3sun:A (2.42) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22023103 PDBbind: Kd=9.2uM
    10661 3sun:A (2.42) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22023103 PDBbind: Kd=9.2uM
    10662 3suo:A (2.23) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22023103 PDBbind: Kd=15.1uM
    10663 3suo:A (2.23) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22023103 PDBbind: Kd=15.1uM
    10664 3sup:A (2.32) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22023103 PDBbind: Kd=317uM
    10665 3sup:A (2.32) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22023103 PDBbind: Kd=317uM
    10666 3suq:A (3.15) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22023103 PDBbind: Kd=24.8uM
    10667 3suq:A (3.15) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 22023103 PDBbind: Kd=24.8uM
    10668 3sur:A (1.9) BS01 NGT 3.2.1.52 GO:0004553 ... D2KW09 22367352 MOAD: Ki=70uM
    PDBbind: -logKd/Ki=4.15, Ki=70uM
    10669 3sus:A (1.8) BS01 GNL 3.2.1.52 GO:0004553 ... D2KW09 22367352 MOAD: Ki=71uM
    PDBbind: -logKd/Ki=4.15, Ki=71uM
    10670 3sut:A (1.9) BS01 OAN 3.2.1.52 GO:0004553 ... D2KW09 22367352 MOAD: Ki=0.014uM
    PDBbind: -logKd/Ki=7.85, Ki=14nM
    10671 3suu:A (1.6) BS01 OGN 3.2.1.52 GO:0004553 ... D2KW09 22367352 MOAD: Ki=0.003uM
    PDBbind: -logKd/Ki=8.52, Ki=3nM
    10672 3suv:A (1.6) BS01 NOK 3.2.1.52 GO:0004553 ... D2KW09 22367352 PDBbind: -logKd/Ki=4.55, Ki=28uM
    10673 3suw:A (1.9) BS01 GC2 3.2.1.52 GO:0004553 ... D2KW09 22367352 MOAD: Ki=20uM
    PDBbind: -logKd/Ki=4.70, Ki=20uM
    10674 3sv2:H (1.3) BS03 P05 3.4.21.5 GO:0004252 ... P00734 22366545 MOAD: Ki=64uM
    PDBbind: -logKd/Ki=4.19, Ki=64.0uM
    10675 3sv6:A (1.4) BS01 SV6 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0006508 ... A8DG50 22910833 PDBbind: -logKd/Ki=7.46, Ki=34.4nM
    10676 3sv7:A (1.55) BS01 SV6 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0006508 ... A8DG50 22910833 PDBbind: -logKd/Ki=6.08, Ki=823nM
    10677 3sv8:A (2.5) BS01 SV6 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0006508 ... A8DG50 22910833 PDBbind: -logKd/Ki=7.91, Ki=12.2nM
    10678 3sv9:A (1.6) BS01 SV6 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0006508 ... A8DG50 22910833 PDBbind: -logKd/Ki=5.00, Ki>10000nM
    10679 3svj:P (1.55) BS01 4LI 3.5.1.88 GO:0006412 ... Q8DP79 21711014 MOAD: Ki=117nM
    PDBbind: -logKd/Ki=6.93, Ki=117nM
    BindingDB: Ki=117nM
    10680 3svv:A (2.204) BS01 VSP 2.7.10.2 GO:0004672 ... P00523 21852571 PDBbind: -logKd/Ki=6.94, IC50=114nM
    10681 3sw2:B (2.42) BS01 FI1 3.4.21.6 GO:0004252 ... P00742 22041058 MOAD: Ki=4.71nM
    PDBbind: -logKd/Ki=8.33, Ki=4.71nM
    BindingDB: IC50=13nM, Ki=4.71nM
    10682 3sw8:P (1.702) BS01 5LI 3.5.1.88 GO:0006412 ... Q939R9 21711014 MOAD: Ki=25910nM
    PDBbind: -logKd/Ki=4.50, Ki=31.72uM
    10683 3sww:A (2.0) BS01 KXB 3.4.14.5 GO:0001618 ... P27487 21996520 MOAD: Ki=4nM
    PDBbind: -logKd/Ki=8.40, Ki=4nM
    BindingDB: Ki=4nM
    10684 3sx4:A (2.6) BS01 KXA 3.4.14.5 GO:0001618 ... P27487 21996520 PDBbind: -logKd/Ki=8.52, Ki=3nM
    BindingDB: Ki=3nM
    10685 3sx9:A (2.65) BS01 BK7 2.7.11.17 GO:0004672 ... Q9BJF5 22369268 PDBbind: -logKd/Ki=8.89, Ki=1.3nM
    BindingDB: IC50=3.80nM
    10686 3sxf:A (2.04) BS01 BK5 2.7.11.17 GO:0004672 ... Q9BJF5 22369268 MOAD: Ki=0.0025uM
    PDBbind: -logKd/Ki=8.60, Ki=2.5nM
    BindingDB: IC50=5.00nM
    10687 3sym:A (2.4) BS01 GP0 2.4.1.1 GO:0000166 ... P00489 22296957 MOAD: Ki=27.1uM
    PDBbind: -logKd/Ki=4.57, Ki=27.1uM
    10688 3syr:A (2.4) BS01 GPK 2.4.1.1 GO:0000166 ... P00489 22296957 MOAD: Ki=7.9uM
    PDBbind: -logKd/Ki=5.10, Ki=7.9uM
    BindingDB: Ki=5500nM
    10689 3sz1:B (2.3) BS01 LU2 ? GO:0003677 ... P37231 22391103 PDBbind: -logKd/Ki=4.66, IC50=21.8uM
    10690 3sz9:A (2.1) BS01 I3E 1.2.1.3 GO:0004029 ... P05091 22021038 PDBbind: -logKd/Ki=5.27, IC50=5.4uM
    10691 3szb:A (1.51) BS01 I1E 1.2.1.5 GO:0004028 ... P30838 22021038 PDBbind: -logKd/Ki=4.92, IC50=12uM
    10692 3szq:A (2.353) BS01 dna 3.6.1.71
    3.6.1.72    		 GO:0003824 ... O74859 21984210 PDBbind: Kd=190nM
    10693 3szq:A (2.353) BS02 dna 3.6.1.71
    3.6.1.72    		 GO:0003824 ... O74859 21984210 PDBbind: Kd=190nM
    10694 3t01:A (1.6) BS03 PPF 3.6.1.9 GO:0016787 ... Q92UV8 22035792 MOAD: Ki=33uM
    PDBbind: -logKd/Ki=4.48, Ki=33uM
    10695 3t03:A (2.1) BS02 3T0 ? GO:0003677 ... P37231 22584573 MOAD: Ki=160nM
    PDBbind: -logKd/Ki=6.80, Ki=160nM
    10696 3t07:A (3.3) BS01 09C 2.7.1.40 GO:0000287 ... Q6GG09 22030393 PDBbind: -logKd/Ki=7.80, IC50=16nM
    BindingDB: IC50=16nM
    10697 3t07:B (3.3) BS01 09C 2.7.1.40 GO:0000287 ... Q6GG09 22030393 PDBbind: -logKd/Ki=7.80, IC50=16nM
    BindingDB: IC50=16nM
    10698 3t08:A (2.0) BS03 IPT 3.2.1.23 GO:0000287 ... P00722 22155115 MOAD: Ki=0.91mM
    PDBbind: -logKd/Ki=3.04, Ki=0.91mM
    BindingDB: Ki=7.6e+4nM
    10699 3t08:D (2.0) BS03 IPT 3.2.1.23 GO:0000287 ... P00722 22155115 MOAD: Ki=0.91mM
    PDBbind: -logKd/Ki=3.04, Ki=0.91mM
    BindingDB: Ki=7.6e+4nM
    10700 3t09:A (1.75) BS01 149 3.2.1.23 GO:0000287 ... P00722 22155115 MOAD: Ki=0.16mM
    PDBbind: -logKd/Ki=3.80, Ki=0.16mM
    10701 3t09:D (1.75) BS01 149 3.2.1.23 GO:0000287 ... P00722 22155115 MOAD: Ki=0.16mM
    PDBbind: -logKd/Ki=3.80, Ki=0.16mM
    10702 3t0b:A (2.4) BS03 IPT 3.2.1.23 GO:0000287 ... P00722 22155115 MOAD: Ki=0.05mM
    PDBbind: -logKd/Ki=4.30, Ki=0.05mM
    BindingDB: Ki=7.6e+4nM
    10703 3t0b:D (2.4) BS03 IPT 3.2.1.23 GO:0000287 ... P00722 22155115 MOAD: Ki=0.05mM
    PDBbind: -logKd/Ki=4.30, Ki=0.05mM
    BindingDB: Ki=7.6e+4nM
    10704 3t0d:A (1.93) BS01 149 3.2.1.23 GO:0000287 ... P00722 22155115 MOAD: Ki=4.3mM
    PDBbind: -logKd/Ki=2.37, Ki=4.3mM
    10705 3t0d:D (1.93) BS01 149 3.2.1.23 GO:0000287 ... P00722 22155115 MOAD: Ki=4.3mM
    PDBbind: -logKd/Ki=2.37, Ki=4.3mM
    10706 3t0l:A (1.6) BS01 1CT ? GO:0000122 ... P31947 23939230 PDBbind: -logKd/Ki=4.52, IC50=30uM
    10707 3t0m:A (1.62) BS01 2CT ? GO:0000122 ... P31947 23939230 PDBbind: -logKd/Ki=3.94, IC50=116uM
    10708 3t0t:A (3.1) BS01 I30 2.7.1.40 GO:0000287 ... Q6GG09 22066782 PDBbind: -logKd/Ki=7.04, IC50=91nM
    BindingDB: IC50=91nM
    10709 3t0t:B (3.1) BS01 I30 2.7.1.40 GO:0000287 ... Q6GG09 22066782 PDBbind: -logKd/Ki=7.04, IC50=91nM
    BindingDB: IC50=91nM
    10710 3t0w:A (1.501) BS01 DIW N/A N/A N/A 22390683 PDBbind: -logKd/Ki=7.30, Kd=50nM
    10711 3t0x:A (1.96) BS01 DIW N/A N/A N/A 22390683 PDBbind: -logKd/Ki=8.00, Kd=10nM
    10712 3t0x:B (1.96) BS01 DIW N/A N/A N/A 22390683 PDBbind: -logKd/Ki=8.00, Kd=10nM
    10713 3t19:A (2.6) BS01 5MA 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 21985673 PDBbind: -logKd/Ki=8.66, Ki=2.2nM
    10714 3t1a:A (2.4) BS01 5MA 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 21985673 MOAD: Ki=4.3nM
    PDBbind: -logKd/Ki=8.37, Ki=4.3nM
    10715 3t1l:A (1.6) BS01 MQT ? GO:0030246 ... P17931 22136701 MOAD: Kd=0.55mM
    PDBbind: -logKd/Ki=3.26, Kd=0.55mM
    BindingDB: Kd=550000nM
    10716 3t1m:A (1.55) BS01 DQT ? GO:0030246 ... P17931 22136701 MOAD: Kd=0.91mM
    PDBbind: -logKd/Ki=3.04, Kd=0.91mM
    10717 3t2p:A (2.6) BS01 IPT 3.2.1.23 GO:0000287 ... P00722 22155115 PDBbind: -logKd/Ki=3.60, Ki=0.25mM
    BindingDB: Ki=7.6e+4nM
    10718 3t2p:D (2.6) BS01 IPT 3.2.1.23 GO:0000287 ... P00722 22155115 PDBbind: -logKd/Ki=3.60, Ki=0.25mM
    BindingDB: Ki=7.6e+4nM
    10719 3t2q:A (2.4) BS01 149 3.2.1.23 GO:0000287 ... P00722 22155115 MOAD: Ki=0.22mM
    PDBbind: -logKd/Ki=3.66, Ki=0.22mM
    10720 3t2q:D (2.4) BS01 149 3.2.1.23 GO:0000287 ... P00722 22155115 MOAD: Ki=0.22mM
    PDBbind: -logKd/Ki=3.66, Ki=0.22mM
    10721 3t2t:A (1.9) BS01 MQT ? GO:0002317 ... P09382 22136701 PDBbind: -logKd/Ki=2.40, Kd>4mM
    BindingDB: Kd=>4000000nM
    10722 3t2v:B (2.51) BS01 KKJ ? GO:0001818 ... Q9GK12 23149273 PDBbind: -logKd/Ki=6.99, Kd=0.103uM
    10723 3t2v:D (2.51) BS01 KKJ ? GO:0001818 ... Q9GK12 23149273 PDBbind: -logKd/Ki=6.99, Kd=0.103uM
    10724 3t2w:A (1.5) BS01 BTN ? GO:0009374 ... Q12QS6 22493427 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=7.46, Kd=35nM
    10725 3t3c:A (2.1) BS01 017 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 22644035 MOAD: Ki=0.059nM
    PDBbind: -logKd/Ki=10.23, Ki=59pM
    10726 3t3c:B (2.1) BS01 017 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 22644035 PDBbind: -logKd/Ki=10.23, Ki=59pM
    10727 3t3d:A (2.5) BS01 CJB 2.4.1.1 GO:0000166 ... P00489 22267166 MOAD: Ki=12.39uM
    PDBbind: -logKd/Ki=4.91, Ki=12.39uM
    BindingDB: Ki=6100nM
    10728 3t3e:A (2.15) BS01 GPQ 2.4.1.1 GO:0000166 ... P00489 22267166 MOAD: Ki=1.02uM
    PDBbind: -logKd/Ki=5.99, Ki=1.02uM
    BindingDB: Ki=1020nM
    10729 3t3g:A (2.4) BS01 GPU 2.4.1.1 GO:0000166 ... P00489 22267166 MOAD: Ki=3.27uM
    PDBbind: -logKd/Ki=5.49, Ki=3.27uM
    10730 3t3h:A (2.6) BS01 GPV 2.4.1.1 GO:0000166 ... P00489 22267166 PDBbind: -logKd/Ki=5.71, Ki=1.94uM
    10731 3t3i:A (2.65) BS01 GPW 2.4.1.1 GO:0000166 ... P00489 22267166 PDBbind: -logKd/Ki=4.77, Ki=17.00uM
    10732 3t3u:A (2.1) BS01 BK6 2.7.11.17 GO:0004672 ... Q9BJF5 22369268 MOAD: Ki=0.0025uM
    PDBbind: -logKd/Ki=8.60, Ki=2.5nM
    BindingDB: IC50=4.90nM
    10733 3t3v:A (2.04) BS01 BK4 2.7.11.17 GO:0004672 ... Q9BJF5 22369268 MOAD: Ki=0.003uM
    PDBbind: -logKd/Ki=8.52, Ki=3nM
    BindingDB: IC50=6.00nM
    10734 3t3y:A (2.001) BS02 MD6 1.14.11.33 GO:0005515 ... P05050 22263962 MOAD: ic50=3.4uM
    PDBbind: -logKd/Ki=5.47, IC50=3.4uM
    10735 3t4h:B (1.65) BS02 MD5 1.14.11.33 GO:0005515 ... P05050 22263962 MOAD: ic50=5.2uM
    PDBbind: -logKd/Ki=5.28, IC50=5.2uM
    10736 3t4n:C (2.3) BS01 ADP ? GO:0004679 ... P12904 22019086 MOAD: Kd=72uM
    PDBbind: -logKd/Ki=4.14, Kd=72uM
    10737 3t4v:A (1.732) BS02 MD3 1.14.11.33 GO:0005515 ... P05050 22263962 MOAD: ic50=0.5uM
    PDBbind: -logKd/Ki=6.30, IC50=0.5uM
    10738 3t5u:A (1.75) BS02 A09 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21952494 MOAD: Ki=5.47uM
    PDBbind: -logKd/Ki=7.59, Ki=0.026uM
    BindingDB: Ki=26nM
    10739 3t5u:A (1.75) BS03 A09 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21952494 MOAD: Ki=5.47uM
    PDBbind: -logKd/Ki=7.59, Ki=0.026uM
    BindingDB: Ki=26nM
    10740 3t5u:A (1.75) BS04 A09 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21952494 MOAD: Ki=5.47uM
    PDBbind: -logKd/Ki=7.59, Ki=0.026uM
    BindingDB: Ki=26nM
    10741 3t5u:A (1.75) BS05 A09 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21952494 MOAD: Ki=5.47uM
    PDBbind: -logKd/Ki=7.59, Ki=0.026uM
    BindingDB: Ki=26nM
    10742 3t60:A (2.396) BS01 DUA 3.6.1.23 GO:0000287 ... Q8II92 22049550 MOAD: Ki=0.2uM
    PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    BindingDB: Ki=200nM
    10743 3t60:A (2.396) BS02 DUA 3.6.1.23 GO:0000287 ... Q8II92 22049550 MOAD: Ki=0.2uM
    PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    BindingDB: Ki=200nM
    10744 3t60:B (2.396) BS01 DUA 3.6.1.23 GO:0000287 ... Q8II92 22049550 MOAD: Ki=0.2uM
    PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    BindingDB: Ki=200nM
    10745 3t60:B (2.396) BS02 DUA 3.6.1.23 GO:0000287 ... Q8II92 22049550 MOAD: Ki=0.2uM
    PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    BindingDB: Ki=200nM
    10746 3t64:A (1.65) BS02 DU3 3.6.1.23 GO:0000287 ... Q8II92 22049550 MOAD: Ki=0.2uM
    PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    10747 3t64:B (1.65) BS02 DU3 3.6.1.23 GO:0000287 ... Q8II92 22049550 MOAD: Ki=0.2uM
    PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    10748 3t6y:A (2.6) BS02 DU2 3.6.1.23 GO:0000287 ... Q8II92 22049550 PDBbind: -logKd/Ki=5.52, Ki=3.0uM
    10749 3t6y:B (2.6) BS02 DU2 3.6.1.23 GO:0000287 ... Q8II92 22049550 PDBbind: -logKd/Ki=5.52, Ki=3.0uM
    10750 3t70:A (1.8) BS02 DU4 3.6.1.23 GO:0000287 ... Q8II92 22049550 MOAD: Ki=0.5uM
    PDBbind: -logKd/Ki=6.30, Ki=0.5uM
    10751 3t70:B (1.8) BS02 DU4 3.6.1.23 GO:0000287 ... Q8II92 22049550 MOAD: Ki=0.5uM
    PDBbind: -logKd/Ki=6.30, Ki=0.5uM
    10752 3t70:B (1.8) BS03 DU4 3.6.1.23 GO:0000287 ... Q8II92 22049550 MOAD: Ki=0.5uM
    PDBbind: -logKd/Ki=6.30, Ki=0.5uM
    10753 3t82:A (2.002) BS02 SG4 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21958118 MOAD: Ki=101nM
    PDBbind: -logKd/Ki=7.00, Ki=101nM
    10754 3t83:A (1.8) BS02 SG5 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21958118 MOAD: Ki=105nM
    PDBbind: -logKd/Ki=6.98, Ki=105nM
    10755 3t84:A (2.0) BS02 SG6 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21958118 MOAD: Ki=106nM
    PDBbind: -logKd/Ki=6.97, Ki=106nM
    10756 3t85:A (2.4) BS02 SG7 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21958118 MOAD: Ki=11.3nM
    PDBbind: -logKd/Ki=7.95, Ki=11.3nM
    10757 3t8s:B (3.77) BS01 I3P ? GO:0005220 ... P29994 21892169 PDBbind: -logKd/Ki=8.55, Kd=2.82nM
    BindingDB: Kd=8.7nM, EC50=209nM
    10758 3t8v:A (1.8) BS02 BTJ 3.4.11.- GO:0006508 ... O96935 21844374 MOAD: Ki=260nM
    PDBbind: -logKd/Ki=6.59, Ki=260nM
    10759 3t8w:A (2.0) BS04 DGZ 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 21844374 MOAD: Ki=330nM
    PDBbind: -logKd/Ki=7.54, Ki=29nM
    10760 3t8w:B (2.0) BS04 DGZ 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 21844374 MOAD: Ki=330nM
    PDBbind: -logKd/Ki=7.54, Ki=29nM
    10761 3t8w:D (2.0) BS04 DGZ 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 21844374 MOAD: Ki=330nM
    PDBbind: -logKd/Ki=7.54, Ki=29nM
    10762 3t8w:F (2.0) BS04 DGZ 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 21844374 MOAD: Ki=330nM
    PDBbind: -logKd/Ki=7.54, Ki=29nM
    10763 3t9t:A (1.65) BS01 IAQ 2.7.10.2 GO:0004672 ... Q08881 21958547 PDBbind: -logKd/Ki=8.71, IC50=1.93nM
    10764 3ta0:A (2.3) BS01 ATP ? GO:0005524 ... O28524 22039461 PDBbind: -logKd/Ki=3.47, Kd=338uM
    10765 3ta0:A (2.3) BS02 ATP ? GO:0005524 ... O28524 22039461 PDBbind: -logKd/Ki=3.47, Kd=338uM
    10766 3ta0:B (2.3) BS01 ATP ? GO:0005524 ... O28524 22039461 PDBbind: -logKd/Ki=3.47, Kd=338uM
    10767 3ta0:B (2.3) BS02 ATP ? GO:0005524 ... O28524 22039461 PDBbind: -logKd/Ki=3.47, Kd=338uM
    10768 3ta1:A (1.9) BS01 ADP ? GO:0005524 ... O28524 22039461 PDBbind: -logKd/Ki=3.25, Kd=568uM
    10769 3ta1:A (1.9) BS02 ADP ? GO:0005524 ... O28524 22039461 PDBbind: -logKd/Ki=3.25, Kd=568uM
    10770 3ta1:C (1.9) BS01 ADP ? GO:0005524 ... O28524 22039461 PDBbind: -logKd/Ki=3.25, Kd=568uM
    10771 3ta1:C (1.9) BS02 ADP ? GO:0005524 ... O28524 22039461 PDBbind: -logKd/Ki=3.25, Kd=568uM
    10772 3tam:A (2.51) BS01 M06 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 22071300 PDBbind: -logKd/Ki=8.43, Ki=3.7nM
    10773 3tao:A (1.45) BS01 PGH 5.3.1.1 GO:0004807 ... P9WG43 22120738 MOAD: Kd=7.28uM
    PDBbind: -logKd/Ki=5.14, Kd=7.28uM
    10774 3tao:A (1.45) BS02 PGH 5.3.1.1 GO:0004807 ... P9WG43 22120738 MOAD: Kd=7.28uM
    PDBbind: -logKd/Ki=5.14, Kd=7.28uM
    10775 3tay:A (1.85) BS01 MN0 ? GO:0019028 ... P0C6Y8 23035213 MOAD: Kd=0.42mM
    PDBbind: -logKd/Ki=3.38, Kd=0.42mM
    10776 3tb6:A (2.21) BS01 ARB ? GO:0006355 ... P96711 22281747 PDBbind: -logKd/Ki=5.08, Kd=8.4uM
    10777 3tc5:A (1.4) BS01 3T5 5.2.1.8 GO:0000413 ... Q13526 21797253 PDBbind: -logKd/Ki=5.17, Kd=6.8uM
    10778 3tcp:A (2.69) BS01 CKJ 2.7.10.1 GO:0004672 ... Q12866 22662287 PDBbind: -logKd/Ki=8.37, Ki=4.3nM
    BindingDB: IC50=2.9nM, Ki=4.3nM
    10779 3tct:A (1.3) BS01 3MI ? GO:0005179 ... P02766 22645360 MOAD: Kd=3nM
    PDBbind: -logKd/Ki=8.52, Kd=3nM
    BindingDB: IC50=3100nM, Kd=274nM
    10780 3tct:B (1.3) BS01 3MI ? GO:0005179 ... P02766 22645360 MOAD: Kd=3nM
    PDBbind: -logKd/Ki=8.52, Kd=3nM
    BindingDB: IC50=3100nM, Kd=274nM
    10781 3tcy:A (1.55) BS01 PHE 1.14.16.1 GO:0004497 ... P30967 23860686 PDBbind: -logKd/Ki=4.62, Kd=24uM
    10782 3td4:A (1.79) BS01 API ? GO:0016020 ... Q6RYW5 21965596 MOAD: Kd=2.2uM
    PDBbind: -logKd/Ki=5.66, Kd=2.2uM
    10783 3tdc:A (2.41) BS01 0EU 6.4.1.2 GO:0003989 ... O00763 21944854 MOAD: ic50=5.4nM
    PDBbind: -logKd/Ki=8.27, IC50=5.4nM
    BindingDB: IC50=5.4nM
    10784 3tdh:C (2.3) BS01 AMP ? GO:0004679 ... P12904 22019086 MOAD: Kd=55uM
    PDBbind: -logKd/Ki=4.26, Kd=55uM
    10785 3tdj:A (1.95) BS02 3TJ ? GO:0015276 ... P19491 21895609 PDBbind: -logKd/Ki=5.25, Kd=5.6uM
    10786 3tdj:A (1.95) BS03 3TJ ? GO:0015276 ... P19491 21895609 PDBbind: -logKd/Ki=5.25, Kd=5.6uM
    10787 3tdj:B (1.95) BS01 3TJ ? GO:0015276 ... P19491 21895609 PDBbind: -logKd/Ki=5.25, Kd=5.6uM
    10788 3tdj:B (1.95) BS02 3TJ ? GO:0015276 ... P19491 21895609 PDBbind: -logKd/Ki=5.25, Kd=5.6uM
    10789 3tf6:A (2.35) BS01 DBH ? GO:0005506 ... P80188 N/A PDBbind: -logKd/Ki=6.40, Kd=0.40uM
    10790 3tfn:A (2.07) BS01 2CJ 2.5.1.96 GO:0003824 ... A9JQL9 22290830 MOAD: Ki=0.27uM
    PDBbind: -logKd/Ki=6.57, Ki=0.27uM
    10791 3tfp:A (2.0) BS01 03L 2.5.1.96 GO:0003824 ... A9JQL9 22290830 PDBbind: -logKd/Ki=6.47, Ki=0.34uM
    10792 3tfu:A (1.94) BS01 PL8 2.6.1.62 GO:0004015 ... P9WQ81 21988601 PDBbind: -logKd/Ki=3.28, Ki=520uM
    10793 3tfu:A (1.94) BS02 PL8 2.6.1.62 GO:0004015 ... P9WQ81 21988601 PDBbind: -logKd/Ki=3.28, Ki=520uM
    10794 3tfu:B (1.94) BS01 PL8 2.6.1.62 GO:0004015 ... P9WQ81 21988601 PDBbind: -logKd/Ki=3.28, Ki=520uM
    10795 3tfu:B (1.94) BS02 PL8 2.6.1.62 GO:0004015 ... P9WQ81 21988601 PDBbind: -logKd/Ki=3.28, Ki=520uM
    10796 3tfv:A (3.0) BS01 2CN 2.5.1.96 GO:0003824 ... A9JQL9 22290830 PDBbind: -logKd/Ki=7.10, Ki=0.08uM
    10797 3tge:A (1.96) BS02 TGE 3.1.4.35 GO:0004114 ... O76074 21955943 MOAD: ic50=0.07nM
    PDBbind: -logKd/Ki=10.15, IC50=0.07nM
    BindingDB: IC50=0.070000nM
    10798 3tgs:A (2.7) BS01 03G ? GO:0019031 ... C6G099 22451932 PDBbind: -logKd/Ki=5.39, Kd=4.1uM
    10799 3th0:A (1.75) BS01 RAM 3.2.1.- N/A P12528 23292517 PDBbind: -logKd/Ki=4.12, Kd=75.8uM
    10800 3th0:A (1.75) BS02 MAN 3.2.1.- N/A P12528 23292517 PDBbind: -logKd/Ki=4.12, Kd=75.8uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218