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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    10401 3ro0:A (1.5) BS01 TPT 3.4.19.3 GO:0005737 ... P46107 21875148 PDBbind: -logKd/Ki=4.50, IC50=31.89uM
    10402 3ro4:A (2.6) BS01 LJ9 2.7.1.3 GO:0004454 ... P50053 21767952 PDBbind: -logKd/Ki=6.23, IC50=0.59uM
    BindingDB: IC50=5360nM
    10403 3roc:A (1.7) BS01 29A 2.7.11.24 GO:0000077 ... Q16539 21620699 PDBbind: -logKd/Ki=8.19, Ki=6.4nM
    BindingDB: Ki=193nM, IC50=12nM
    10404 3rpr:A (1.75) BS01 25Z 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=4.00, IC50>100uM
    10405 3rpv:A (1.8) BS01 26Z 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=7.15, IC50=0.07uM
    10406 3rpy:A (1.9) BS01 27Z 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=5.32, IC50=4.8uM
    10407 3rqw:A (2.913) BS01 ACH ? GO:0004888 ... E0SJQ4 22395605 PDBbind: -logKd/Ki=2.70, Kd=2mM
    10408 3rqw:A (2.913) BS02 ACH ? GO:0004888 ... E0SJQ4 22395605 PDBbind: -logKd/Ki=2.70, Kd=2mM
    10409 3rqw:B (2.913) BS01 ACH ? GO:0004888 ... E0SJQ4 22395605 PDBbind: -logKd/Ki=2.70, Kd=2mM
    10410 3rqw:B (2.913) BS02 ACH ? GO:0004888 ... E0SJQ4 22395605 PDBbind: -logKd/Ki=2.70, Kd=2mM
    10411 3rr4:A (1.68) BS02 HRD 2.4.2.29 GO:0002099 ... P28720 22736391 MOAD: Ki=28050nM
    PDBbind: -logKd/Ki=4.55, Ki=28.05uM
    10412 3rsb:A (2.8) BS01 GTP 2.7.7.62 GO:0005525 ... Q58517 21542645 PDBbind: -logKd/Ki=6.40, Kd=0.4uM
    10413 3rsr:A (2.3) BS01 N5P 1.17.4.1 GO:0000166 ... P21524 22933704 MOAD: Kd=44uM
    PDBbind: -logKd/Ki=4.36, Kd=44uM
    10414 3rsv:A (2.5) BS01 3RS 3.4.23.46 GO:0004190 ... P56817 21707077 MOAD: ic50=0.0007uM
    PDBbind: -logKd/Ki=9.15, IC50=0.7nM
    BindingDB: IC50=0.700000nM
    10415 3rsx:A (2.48) BS01 RSV 3.4.23.46 GO:0004190 ... P56817 21707077 MOAD: Kd=38.8uM
    PDBbind: -logKd/Ki=4.41, Kd=38.8uM
    BindingDB: Kd=38800nM
    10416 3rt4:C (1.7) BS01 LP5 ? GO:0001818 ... Q9GK12 21454594 MOAD: Kd=1.6nM
    PDBbind: -logKd/Ki=8.80, Kd=1.6nM
    10417 3rt4:D (1.7) BS01 LP5 ? GO:0001818 ... Q9GK12 21454594 PDBbind: -logKd/Ki=8.80, Kd=1.6nM
    10418 3rt6:B (2.836) BS01 FWD ? GO:0015276 ... P19492 21464198 PDBbind: -logKd/Ki=7.15, Ki=70nM
    BindingDB: Ki=18nM, EC50=20900nM
    10419 3rt8:A (2.426) BS01 CWD ? GO:0015276 ... P19492 21464198 PDBbind: -logKd/Ki=6.35, Ki=451nM
    BindingDB: Ki=451nM
    10420 3rtf:B (1.7) BS01 CWD ? GO:0015276 ... P19491 21464198 PDBbind: -logKd/Ki=7.35, Ki=45nM
    BindingDB: Ki=45nM, EC50=2110nM
    10421 3rth:A (2.7) BS01 RTH 3.4.23.46 GO:0004190 ... P56817 21707077 PDBbind: -logKd/Ki=5.21, Kd=6.1uM
    BindingDB: Kd=6100nM
    10422 3rti:A (2.8) BS01 FMP 3.2.2.22 GO:0017148 ... P02879 1433290 PDBbind: -logKd/Ki=7.37, Ki=0.043uM
    10423 3rtm:A (2.76) BS01 RTM 3.4.23.46 GO:0004190 ... P56817 21707077 PDBbind: -logKd/Ki=4.42, Kd=38.4uM
    BindingDB: Kd=38400nM
    10424 3rtn:A (2.7) BS01 RTN 3.4.23.46 GO:0004190 ... P56817 21707077 PDBbind: -logKd/Ki=7.13, IC50=74nM
    BindingDB: IC50=74nM
    10425 3rtp:A (2.4) BS01 34I 2.7.11.24 GO:0004672 ... P53779 21813278 MOAD: ic50=7nM
    PDBbind: -logKd/Ki=8.15, IC50=7nM
    BindingDB: IC50=<100nM
    10426 3ru1:A (2.3) BS01 3RU 3.4.23.46 GO:0004190 ... P56817 21707077 MOAD: Kd=14.2uM
    PDBbind: -logKd/Ki=4.85, Kd=14.2uM
    BindingDB: Kd=14200nM
    10427 3rup:A (1.99) BS01 ADP 6.3.4.14 GO:0003824 ... P24182 21592965 PDBbind: -logKd/Ki=1.57, Ki=27.0mM
    10428 3rup:A (1.99) BS02 ADP 6.3.4.14 GO:0003824 ... P24182 21592965 PDBbind: -logKd/Ki=1.57, Ki=27.0mM
    10429 3rux:A (1.7) BS01 BS5 6.3.4.15 GO:0004077 ... P96884 22118677 MOAD: Kd=0.53nM
    PDBbind: -logKd/Ki=9.28, Kd=0.53nM
    BindingDB: Kd=0.865000nM
    10430 3rv3:A (1.91) BS01 ADP 6.3.4.14 GO:0003824 ... P24182 21592965 PDBbind: -logKd/Ki=2.00, IC50=10mM
    10431 3rv3:A (1.91) BS02 ADP 6.3.4.14 GO:0003824 ... P24182 21592965 PDBbind: -logKd/Ki=2.00, IC50=10mM
    10432 3rv4:A (1.98) BS01 ADP 6.3.4.14 GO:0003824 ... P24182 21592965 PDBbind: -logKd/Ki=2.30, Ki=5mM
    10433 3rv6:A (2.04) BS01 VAE 4.2.99.21
    5.4.4.2
    5.4.99.5    		 GO:0000162 ... P9WFX1 22607697 MOAD: Ki=21uM
    PDBbind: -logKd/Ki=4.68, Ki=21uM
    10434 3rv7:A (2.5) BS01 RVB 4.2.99.21
    5.4.4.2
    5.4.99.5    		 GO:0000162 ... P9WFX1 22607697 MOAD: Ki=14uM
    PDBbind: -logKd/Ki=4.85, Ki=14uM
    10435 3rv8:A (2.29) BS01 RVC 4.2.99.21
    5.4.4.2
    5.4.99.5    		 GO:0000162 ... P9WFX1 22607697 MOAD: Ki=12uM
    PDBbind: -logKd/Ki=4.92, Ki=12uM
    10436 3rv9:A (2.14) BS01 RVD 4.2.99.21
    5.4.4.2
    5.4.99.5    		 GO:0000162 ... P9WFX1 22607697 MOAD: Ki=12uM
    PDBbind: -logKd/Ki=4.92, Ki=12uM
    10437 3rvg:A (2.498) BS01 17P 2.7.10.2 GO:0004672 ... O60674 21942426 MOAD: ic50=5nM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    10438 3rvi:A (2.65) BS01 RVI 3.4.23.46 GO:0004190 ... P56817 21707077 PDBbind: -logKd/Ki=7.96, IC50=11nM
    BindingDB: IC50=11nM
    10439 3rw6:A (2.3) BS01 rna ? GO:0003676 ... Q9UBU9 21822283 PDBbind: Kd=0.09uM
    10440 3rw6:B (2.3) BS01 rna ? GO:0003676 ... Q9UBU9 21822283 PDBbind: Kd=0.09uM
    10441 3rw9:A (2.0) BS01 DSH 2.5.1.16 GO:0003824 ... P19623 21898642 MOAD: Kd=1.1uM
    PDBbind: -logKd/Ki=5.96, Kd=1.1uM
    10442 3rwp:A (1.92) BS01 ABQ 2.7.11.1 GO:0004672 ... O15530 22040023 MOAD: Ki=0.6nM
    PDBbind: -logKd/Ki=9.22, Ki=0.6nM
    BindingDB: Ki=0.600000nM
    10443 3rwq:A (2.55) BS01 3RW 2.7.11.1 GO:0004672 ... O15530 22040023 PDBbind: -logKd/Ki=7.46, Ki=35nM
    BindingDB: Ki=35nM
    10444 3rx5:A (1.99) BS04 G2I 3.2.1.4 GO:0003824 ... Q9AJS0 21785782 PDBbind: -logKd/Ki=6.27, Ki=540nM
    10445 3rx7:A (2.02) BS03 G3I 3.2.1.4 GO:0003824 ... Q9AJS0 21785782 PDBbind: -logKd/Ki=6.03, Ki=940nM
    10446 3rx8:A (2.56) BS03 9MR 3.2.1.4 GO:0003824 ... Q9AJS0 21785782 PDBbind: -logKd/Ki=6.21, Ki=610nM
    10447 3rx8:A (2.56) BS04 9MR 3.2.1.4 GO:0003824 ... Q9AJS0 21785782 PDBbind: -logKd/Ki=6.21, Ki=610nM
    10448 3rxa:A (1.7) BS02 SZ1 3.4.21.4 GO:0004175 ... P00760 N/A PDBbind: -logKd/Ki=2.85, IC50=1.4mM
    10449 3rxb:A (1.7) BS02 ALG 3.4.21.4 GO:0004175 ... P00760 N/A PDBbind: -logKd/Ki=2.66, IC50=2.2mM
    10450 3rxd:A (1.7) BS02 SZ4 3.4.21.4 GO:0004175 ... P00760 N/A PDBbind: -logKd/Ki=3.73, IC50=188uM
    10451 3rxg:A (1.7) BS02 SZ3 3.4.21.4 GO:0004175 ... P00760 N/A PDBbind: -logKd/Ki=2.15, IC50=7.1mM
    10452 3rxh:A (1.7) BS02 HSM 3.4.21.4 GO:0004175 ... P00760 N/A PDBbind: -logKd/Ki=1.80, IC50=15.7mM
    10453 3rxi:A (1.6) BS02 TSS 3.4.21.4 GO:0004175 ... P00760 N/A PDBbind: -logKd/Ki=3.06, IC50=873uM
    10454 3rxj:A (1.7) BS02 GBS 3.4.21.4 GO:0004175 ... P00760 N/A PDBbind: -logKd/Ki=3.06, IC50=873uM
    10455 3rxk:A (1.6) BS02 SZ8 3.4.21.4 GO:0004175 ... P00760 N/A PDBbind: -logKd/Ki=2.68, IC50=2.1mM
    10456 3rxl:A (1.7) BS02 SZ9 3.4.21.4 GO:0004175 ... P00760 N/A PDBbind: -logKd/Ki=2.62, IC50=2.4mM
    10457 3rxm:A (1.7) BS02 SW1 3.4.21.4 GO:0004175 ... P00760 N/A PDBbind: -logKd/Ki=3.63, IC50=232uM
    10458 3rxo:A (1.6) BS02 SW2 3.4.21.4 GO:0004175 ... P00760 N/A PDBbind: -logKd/Ki=4.08, IC50=83.3uM
    10459 3rxp:A (1.6) BS02 SW3 3.4.21.4 GO:0004175 ... P00760 N/A PDBbind: -logKd/Ki=2.08, IC50=8.3mM
    10460 3ry8:A (1.4) BS01 FLC ? N/A Q5F4T5 22031945 MOAD: Kd=460uM
    PDBbind: -logKd/Ki=3.34, Kd=460uM
    10461 3ryj:B (1.39) BS02 RYJ 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21790183 MOAD: Kd=16nM
    PDBbind: -logKd/Ki=7.80, Kd=16nM
    10462 3ryv:B (1.2) BS02 RYV 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21790183 MOAD: Kd=86nM
    PDBbind: -logKd/Ki=7.07, Kd=86nM
    10463 3ryw:A (2.9) BS01 K9H ? GO:0004161 ... A5K4U6 22392982 PDBbind: -logKd/Ki=6.24, Ki=570nM
    10464 3ryw:A (2.9) BS04 K9H ? GO:0004161 ... A5K4U6 22392982 PDBbind: -logKd/Ki=6.24, Ki=570nM
    10465 3ryw:D (2.9) BS01 K9H ? GO:0004161 ... A5K4U6 22392982 PDBbind: -logKd/Ki=6.24, Ki=570nM
    10466 3ryw:D (2.9) BS02 K9H ? GO:0004161 ... A5K4U6 22392982 PDBbind: -logKd/Ki=6.24, Ki=570nM
    10467 3ryx:B (1.6) BS02 RYX 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21790183 MOAD: Kd=7.3nM
    PDBbind: -logKd/Ki=8.14, Kd=7.3nM
    10468 3ryy:A (1.16) BS02 RYY 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21790183 MOAD: Kd=38nM
    PDBbind: -logKd/Ki=7.42, Kd=38nM
    10469 3ryy:A (1.16) BS03 RYY 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21790183 MOAD: Kd=38nM
    PDBbind: -logKd/Ki=7.42, Kd=38nM
    10470 3ryz:A (1.37) BS02 RYZ 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21790183 MOAD: Kd=2.4nM
    PDBbind: -logKd/Ki=8.62, Kd=2.4nM
    10471 3rz0:B (1.798) BS02 RZ0 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21790183 MOAD: Kd=28nM
    PDBbind: -logKd/Ki=7.55, Kd=28nM
    10472 3rz1:B (1.51) BS02 RZ1 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21790183 MOAD: Kd=1.8nM
    PDBbind: -logKd/Ki=8.74, Kd=1.8nM
    10473 3rz3:A (2.3) BS01 U94 2.3.2.23
    2.3.2.24    		 N/A P49427 21683433 MOAD: ic50=1.72uM
    PDBbind: -logKd/Ki=5.76, IC50=1.72uM
    10474 3rz5:A (1.65) BS02 RZ5 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21790183 MOAD: Kd=13nM
    PDBbind: -logKd/Ki=7.89, Kd=13nM
    10475 3rz7:A (1.8) BS02 RZ7 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21790183 MOAD: Kd=1.1nM
    PDBbind: -logKd/Ki=8.96, Kd=1.1nM
    10476 3rz8:A (1.7) BS02 RZ8 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21790183 MOAD: Kd=6.7nM
    PDBbind: -logKd/Ki=8.17, Kd=6.7nM
    10477 3rzb:A (1.9) BS01 02Z 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=4.00, IC50>100uM
    10478 3rzi:A (1.95) BS03 TRP 2.5.1.54 GO:0003849 ... O53512 22154807 PDBbind: -logKd/Ki=5.33, Kd=4.7uM
    10479 3rzi:B (1.95) BS03 TRP 2.5.1.54 GO:0003849 ... O53512 22154807 PDBbind: -logKd/Ki=5.33, Kd=4.7uM
    10480 3s00:A (1.8) BS01 Z60 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=4.92, IC50=12uM
    10481 3s0b:A (1.22) BS01 FNA N/A GO:0005549 ... N/A 22075131 MOAD: Kd=0.32uM
    PDBbind: -logKd/Ki=6.49, Kd=0.32uM
    10482 3s0d:A (1.24) BS01 CTV N/A GO:0005549 ... N/A 22075131 MOAD: Kd=280nM
    PDBbind: -logKd/Ki=7.05, Kd=90nM
    10483 3s0e:A (1.6) BS01 EOL N/A GO:0005549 ... N/A 22075131 MOAD: Kd=90nM
    PDBbind: -logKd/Ki=6.55, Kd=0.28uM
    10484 3s0j:A (2.0) BS01 Z15 2.4.1.1 GO:0000166 ... P00489 21821421 MOAD: ic50=169.9uM
    PDBbind: -logKd/Ki=3.77, IC50=169.9uM
    BindingDB: IC50=169900nM
    10485 3s0n:A (1.95) BS02 0BB 3.4.21.39 GO:0002003 ... P23946 21733690 MOAD: ic50=180nM
    PDBbind: -logKd/Ki=6.74, IC50=180nM
    BindingDB: IC50=180nM
    10486 3s0o:A (2.0) BS01 50Z 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=4.48, IC50=33uM
    10487 3s1g:A (1.82) BS02 ITE 2.4.2.29 GO:0002099 ... P28720 22736391 MOAD: Ki=6500nM
    PDBbind: -logKd/Ki=5.19, Ki=6.5uM
    10488 3s1h:A (1.75) BS01 56Z 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=4.77, IC50=17uM
    10489 3s1y:A (1.4) BS01 S1Y 3.5.2.6 GO:0008800 ... P24735 21676616 PDBbind: -logKd/Ki=6.22, IC50=0.6uM
    10490 3s22:A (1.65) BS01 3S2 3.5.2.6 GO:0008800 ... P24735 21676616 PDBbind: -logKd/Ki=5.46, IC50=3.5uM
    10491 3s2a:A (2.55) BS01 2NQ 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 21612232 PDBbind: -logKd/Ki=8.09, IC50=8.1nM
    BindingDB: IC50=8.1nM
    10492 3s2o:A (2.6) BS01 EV6 3.4.23.46 GO:0004190 ... P56817 20656487 PDBbind: -logKd/Ki=5.05, IC50=8.9uM
    BindingDB: IC50=8900nM
    10493 3s2p:A (2.3) BS01 PMU 2.7.11.22 GO:0000082 ... P24941 21684737 MOAD: ic50=0.068uM
    PDBbind: -logKd/Ki=7.17, IC50=68nM
    BindingDB: IC50=68nM
    10494 3s2v:A (2.5) BS01 3HU ? GO:0015276 ... P22756 21619066 MOAD: Ki=157nM
    PDBbind: -logKd/Ki=6.80, Ki=157nM
    BindingDB: Ki=157nM
    10495 3s3i:A (1.8) BS01 CQ0 2.7.11.24 GO:0000077 ... Q16539 22521646 PDBbind: -logKd/Ki=7.80, IC50=16nM
    10496 3s3k:B (3.2) BS01 CSN 3.1.3.48 GO:0004725 ... P35992 22007620 PDBbind: -logKd/Ki=4.01, Kd=97.69uM
    10497 3s3m:A (2.49) BS06 DLU 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-    		 GO:0003676 ... P14350 21719464 PDBbind: -logKd/Ki=7.40, IC50=40nM
    10498 3s3n:A (2.49) BS06 DLU 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-    		 GO:0003676 ... P14350 21719464 PDBbind: -logKd/Ki=7.06, IC50=88nM
    10499 3s3o:A (2.55) BS06 DLU 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-    		 GO:0003676 ... P14350 21719464 PDBbind: -logKd/Ki=7.57, IC50=27nM
    10500 3s3q:A (1.8) BS01 C1P 3.4.22.1 GO:0006508 ... Q8MNY2 21832058 PDBbind: -logKd/Ki=8.77, IC50=1.71nM
    10501 3s3r:A (2.64) BS01 0IW 3.4.22.1 GO:0006508 ... Q8MNY2 21832058 PDBbind: -logKd/Ki=8.68, IC50=2.09nM
    10502 3s3r:A (2.64) BS02 0IW 3.4.22.1 GO:0006508 ... Q8MNY2 21832058 PDBbind: -logKd/Ki=8.68, IC50=2.09nM
    10503 3s3v:A (1.53) BS01 TOP 1.5.1.3 GO:0000900 ... P00374 21684339 MOAD: Ki=593nM
    PDBbind: -logKd/Ki=6.23, Ki=593nM
    BindingDB: IC50=680000nM, Ki=19070nM
    10504 3s3v:A (1.53) BS02 TOP 1.5.1.3 GO:0000900 ... P00374 21684339 MOAD: Ki=593nM
    PDBbind: -logKd/Ki=6.23, Ki=593nM
    BindingDB: IC50=680000nM, Ki=19070nM
    10505 3s43:A (1.26) BS01 478 3.4.23.16 GO:0004190 ... Q7SSE3 22238126 MOAD: Ki=2.53nM
    PDBbind: -logKd/Ki=8.60, Ki=2.53nM
    10506 3s43:B (1.26) BS01 478 ? GO:0004190 ... Q7SSI0 22238126 PDBbind: -logKd/Ki=8.60, Ki=2.53nM
    10507 3s45:A (1.51) BS01 478 3.4.23.47 GO:0004190 ... Q9W9R3 22238126 PDBbind: -logKd/Ki=8.49, Ki=3.24nM
    10508 3s45:B (1.51) BS01 478 3.4.23.47 GO:0004190 ... Q9W9R3 22238126 MOAD: Ki=3.24nM
    PDBbind: -logKd/Ki=8.49, Ki=3.24nM
    10509 3s4q:A (2.27) BS01 NK0 2.7.11.24 GO:0000077 ... Q16539 21705217 MOAD: ic50=4nM
    PDBbind: -logKd/Ki=8.40, IC50=4nM
    BindingDB: IC50=4nM
    10510 3s53:A (1.5) BS01 017 3.4.23.16 GO:0004190 ... Q7SSI0 22238126 MOAD: Ki=0.23nM
    PDBbind: -logKd/Ki=9.64, Ki=0.23nM
    10511 3s53:B (1.5) BS01 017 3.4.23.16 GO:0004190 ... Q7SSI0 22238126 MOAD: Ki=0.23nM
    PDBbind: -logKd/Ki=9.64, Ki=0.23nM
    10512 3s53:B (1.5) BS02 017 3.4.23.16 GO:0004190 ... Q7SSI0 22238126 MOAD: Ki=0.23nM
    PDBbind: -logKd/Ki=9.64, Ki=0.23nM
    10513 3s54:A (1.42) BS01 017 3.4.23.16 GO:0004190 ... Q7SSI0 22238126 PDBbind: -logKd/Ki=9.64, Ki=0.23nM
    10514 3s54:B (1.42) BS01 017 3.4.23.16 GO:0004190 ... Q7SSI0 22238126 MOAD: Ki=0.23nM
    PDBbind: -logKd/Ki=9.64, Ki=0.23nM
    10515 3s56:A (1.88) BS01 ROC 3.4.23.16 GO:0004190 ... Q7SSI0 22238126 MOAD: Ki=0.24nM
    PDBbind: -logKd/Ki=9.62, Ki=0.24nM
    10516 3s56:B (1.88) BS01 ROC 3.4.23.16 GO:0004190 ... Q7SSI0 22238126 MOAD: Ki=0.24nM
    PDBbind: -logKd/Ki=9.62, Ki=0.24nM
    10517 3s56:B (1.88) BS02 ROC 3.4.23.16 GO:0004190 ... Q7SSI0 22238126 MOAD: Ki=0.24nM
    PDBbind: -logKd/Ki=9.62, Ki=0.24nM
    10518 3s5y:A (2.105) BS02 DGJ 3.2.1.22 GO:0003824 ... P06280 22195554 MOAD: Ki=39nM
    PDBbind: -logKd/Ki=7.41, Ki=39.1nM
    BindingDB: IC50=70nM
    10519 3s5y:B (2.105) BS02 DGJ 3.2.1.22 GO:0003824 ... P06280 22195554 MOAD: Ki=39nM
    PDBbind: -logKd/Ki=7.41, Ki=39.1nM
    BindingDB: IC50=70nM
    10520 3s68:A (1.85) BS02 TCW 2.1.1.6 GO:0000287 ... P22734 22349227 PDBbind: -logKd/Ki=8.66, IC50=2.2nM
    BindingDB: IC50=2.2nM
    10521 3s6t:A (2.3) BS01 OAN 3.2.1.52 GO:0004553 ... Q06GJ0 21692744 MOAD: Ki=0.045uM
    PDBbind: -logKd/Ki=7.35, Ki=45nM
    10522 3s71:B (1.25) BS02 EVD 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22011572 PDBbind: -logKd/Ki=8.64, Kd=2.3nM
    BindingDB: IC50=8nM
    10523 3s71:B (1.25) BS03 EVD 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22011572 PDBbind: -logKd/Ki=8.64, Kd=2.3nM
    BindingDB: IC50=8nM
    10524 3s72:B (1.6) BS02 EVE 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22011572 PDBbind: -logKd/Ki=6.40, Kd=400nM
    10525 3s73:B (1.75) BS02 EVF 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22011572 PDBbind: -logKd/Ki=8.70, Kd=2nM
    BindingDB: Ki=30nM
    10526 3s73:B (1.75) BS03 EVF 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22011572 PDBbind: -logKd/Ki=8.70, Kd=2nM
    BindingDB: Ki=30nM
    10527 3s74:B (1.4) BS02 03T 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22011572 PDBbind: -logKd/Ki=8.40, Kd=4nM
    BindingDB: IC50=5.2nM
    10528 3s74:B (1.4) BS03 03T 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22011572 PDBbind: -logKd/Ki=8.40, Kd=4nM
    BindingDB: IC50=5.2nM
    10529 3s75:B (1.5) BS02 EVG 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22011572 PDBbind: -logKd/Ki=6.82, Kd=150nM
    10530 3s75:B (1.5) BS03 EVG 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22011572 PDBbind: -logKd/Ki=6.82, Kd=150nM
    10531 3s76:A (1.6) BS02 EVH 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22011572 PDBbind: -logKd/Ki=5.05, Kd=9000nM
    10532 3s77:B (1.86) BS02 EVI 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22011572 PDBbind: -logKd/Ki=7.21, Kd=61nM
    10533 3s77:B (1.86) BS03 EVI 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22011572 PDBbind: -logKd/Ki=7.21, Kd=61nM
    10534 3s78:B (1.98) BS02 EVJ 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22011572 PDBbind: -logKd/Ki=6.47, Kd=340nM
    10535 3s78:B (1.98) BS03 EVJ 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22011572 PDBbind: -logKd/Ki=6.47, Kd=340nM
    10536 3s7a:A (1.8) BS04 684 1.5.1.3 GO:0000900 ... P00374 21931219 PDBbind: -logKd/Ki=8.96, IC50=1.1nM
    BindingDB: IC50=9.9nM
    10537 3s7b:A (2.42) BS06 NH5 2.1.1.-
    2.1.1.354    		 GO:0000122 ... Q9NRG4 21782458 MOAD: Kd=0.5uM
    PDBbind: -logKd/Ki=6.30, Kd=0.5uM
    BindingDB: IC50=120nM, Kd=500nM, Ki=300nM
    10538 3s7l:A (2.162) BS01 591 3.4.23.46 GO:0004190 ... P56817 21835615 MOAD: ic50=0.08uM
    PDBbind: -logKd/Ki=7.10, IC50=0.08uM
    BindingDB: IC50=80nM, EC50=1700nM
    10539 3s7m:A (2.2) BS01 532 3.4.23.46 GO:0004190 ... P56817 21835615 MOAD: ic50=0.06uM
    PDBbind: -logKd/Ki=8.00, IC50=0.01uM
    BindingDB: IC50=60nM, EC50=420nM
    10540 3s8x:A (1.3) BS02 E59 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22440859 MOAD: Kd=0.07uM
    PDBbind: -logKd/Ki=7.30, Kd=0.05uM
    BindingDB: Kd=67nM
    10541 3s9e:A (1.6) BS01 GLU ? GO:0015276 ... P42264 21907808 PDBbind: -logKd/Ki=5.13, Ki=7.43uM
    10542 3s9i:A (1.9) BS01 XI7 2.3.3.9 GO:0000287 ... P9WK17 23261599 PDBbind: -logKd/Ki=5.70, IC50=2.0uM
    10543 3s9t:A (1.3) BS02 E49 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22440859 MOAD: Kd=0.22uM
    PDBbind: -logKd/Ki=6.82, Kd=0.15uM
    BindingDB: Kd=222nM
    10544 3s9y:A (1.7) BS01 FNU 4.1.1.23 GO:0004590 ... Q8IJH3 19260677 MOAD: Ki=16.6uM
    PDBbind: -logKd/Ki=6.44, Ki=0.36uM
    10545 3s9y:A (1.7) BS02 FNU 4.1.1.23 GO:0004590 ... Q8IJH3 19260677 MOAD: Ki=16.6uM
    PDBbind: -logKd/Ki=6.44, Ki=0.36uM
    10546 3s9y:B (1.7) BS01 FNU 4.1.1.23 GO:0004590 ... Q8IJH3 19260677 MOAD: Ki=16.6uM
    PDBbind: -logKd/Ki=6.44, Ki=0.36uM
    10547 3s9y:B (1.7) BS02 FNU 4.1.1.23 GO:0004590 ... Q8IJH3 19260677 MOAD: Ki=16.6uM
    PDBbind: -logKd/Ki=6.44, Ki=0.36uM
    10548 3s9z:A (1.793) BS02 I92 2.3.3.9 GO:0000287 ... P9WK17 23261599 PDBbind: -logKd/Ki=6.22, IC50=0.6uM
    10549 3sad:A (1.82) BS02 040 2.3.3.9 GO:0000287 ... P9WK17 23261599 PDBbind: -logKd/Ki=5.96, IC50=1.1uM
    10550 3sap:A (1.75) BS02 E2I 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22440859 MOAD: Kd=0.014uM
    PDBbind: -logKd/Ki=7.59, Kd=26nM
    BindingDB: Kd=14nM
    10551 3sax:A (1.1) BS02 E50 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22440859 MOAD: Kd=0.14uM
    PDBbind: -logKd/Ki=6.57, Kd=0.27uM
    BindingDB: Kd=270nM
    10552 3saz:A (2.04) BS01 043 2.3.3.9 GO:0000287 ... P9WK17 23261599 PDBbind: -logKd/Ki=6.10, IC50=0.8uM
    10553 3sb0:A (2.199) BS02 I93 2.3.3.9 GO:0000287 ... P9WK17 23261599 PDBbind: -logKd/Ki=5.26, IC50=5.5uM
    10554 3sbh:A (1.65) BS02 E65 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22440859 MOAD: Kd=0.22uM
    PDBbind: -logKd/Ki=7.28, Kd=52nM
    BindingDB: Kd=33nM
    10555 3sbi:A (1.4) BS02 E90 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22440859 MOAD: Kd=0.017uM
    PDBbind: -logKd/Ki=7.92, Kd=12nM
    BindingDB: Kd=17nM, kon=1600000M-1-s-1, koff=0.0080s-1
    10556 3sc1:A (2.7) BS01 3S1 2.7.11.1 GO:0004672 ... O15530 21779981 PDBbind: -logKd/Ki=4.38, IC50=41.4uM
    10557 3sd5:A (3.2) BS01 SD5 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 22188813 PDBbind: -logKd/Ki=6.58, IC50=262nM
    BindingDB: Kd=130nM, IC50=262nM
    10558 3sdg:A (1.87) BS01 3SE ? GO:0000976 ... P9WMC1 22098589 MOAD: ic50=2.8uM
    PDBbind: -logKd/Ki=5.55, IC50=2.8uM
    BindingDB: IC50=2800nM, EC50=500nM
    10559 3sdi:K (2.65) BS02 3SD 3.4.25.1 GO:0004298 ... P30656 20875739 PDBbind: -logKd/Ki=8.33, IC50=4.7nM
    10560 3sdi:L (2.65) BS01 3SD 3.4.25.1 GO:0000502 ... P23724 20875739 PDBbind: -logKd/Ki=8.33, IC50=4.7nM
    10561 3sdk:K (2.7) BS02 P3N 3.4.25.1 GO:0004298 ... P30656 20875739 PDBbind: -logKd/Ki=6.80, IC50=160nM
    10562 3sdk:L (2.7) BS01 P3N 3.4.25.1 GO:0000502 ... P23724 20875739 PDBbind: -logKd/Ki=6.80, IC50=160nM
    10563 3sfc:A (2.1) BS01 S53 3.4.23.15 GO:0004190 ... P00797 21840218 MOAD: ic50=0.003uM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=192nM
    10564 3sfc:A (2.1) BS02 S53 3.4.23.15 GO:0004190 ... P00797 21840218 MOAD: ic50=0.003uM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=192nM
    10565 3sff:A (2.0) BS01 0DI 3.5.1.-
    3.5.1.98    		 GO:0000118 ... Q9BY41 21723733 MOAD: ic50=200nM
    PDBbind: -logKd/Ki=6.70, IC50=200nM
    BindingDB: IC50=200nM
    10566 3sfg:A (2.209) BS01 2TU 2.7.7.48
    3.4.22.66
    3.6.1.15    		 GO:0003723 ... Q80J95 22341781 MOAD: Kd=0.865uM
    PDBbind: -logKd/Ki=6.06, Kd=0.865uM
    10567 3sfh:A (2.7) BS05 1DI 3.5.1.-
    3.5.1.98    		 GO:0000118 ... Q9BY41 21723733 PDBbind: -logKd/Ki=7.05, IC50=90nM
    BindingDB: IC50=90nM
    10568 3sfi:A (2.31) BS01 3SF ? GO:0000976 ... P9WMC1 22098589 MOAD: ic50=0.4uM
    PDBbind: -logKd/Ki=6.40, IC50=0.4uM
    BindingDB: IC50=400nM, EC50=60nM
    10569 3sgt:B (1.85) BS01 P09 2.5.1.31 GO:0000287 ... P60473 23248302 PDBbind: -logKd/Ki=3.82, IC50=150uM
    10570 3sgv:B (1.61) BS01 2BJ 2.5.1.31 GO:0000287 ... P60472 23248302 PDBbind: -logKd/Ki=4.46, IC50=35uM
    10571 3sgv:B (1.61) BS02 2BJ 2.5.1.31 GO:0000287 ... P60472 23248302 PDBbind: -logKd/Ki=4.46, IC50=35uM
    10572 3sgx:A (2.45) BS01 0FW 2.5.1.31 GO:0000287 ... P60472 23248302 PDBbind: -logKd/Ki=5.49, IC50=3.2uM
    10573 3sgx:A (2.45) BS02 0FW 2.5.1.31 GO:0000287 ... P60472 23248302 PDBbind: -logKd/Ki=5.49, IC50=3.2uM
    10574 3sh0:B (1.84) BS01 SAX 2.5.1.31 GO:0000287 ... P60472 23248302 PDBbind: -logKd/Ki=5.66, IC50=2.2uM
    10575 3sh0:B (1.84) BS02 SAX 2.5.1.31 GO:0000287 ... P60472 23248302 PDBbind: -logKd/Ki=5.66, IC50=2.2uM
    10576 3sh1:A (2.9) BS02 MLK ? GO:0004888 ... Q8WSF8 22009746 PDBbind: -logKd/Ki=7.39, Ki=41nM
    10577 3sh1:A (2.9) BS03 MLK ? GO:0004888 ... Q8WSF8 22009746 PDBbind: -logKd/Ki=7.39, Ki=41nM
    10578 3sh1:E (2.9) BS01 MLK ? GO:0004888 ... Q8WSF8 22009746 PDBbind: -logKd/Ki=7.39, Ki=41nM
    10579 3sh1:E (2.9) BS03 MLK ? GO:0004888 ... Q8WSF8 22009746 PDBbind: -logKd/Ki=7.39, Ki=41nM
    10580 3sha:H (1.52) BS03 P97 3.4.21.5 GO:0004252 ... P00734 22366545 MOAD: Ki=2.6uM
    PDBbind: -logKd/Ki=5.59, Ki=2.6uM
    10581 3shc:H (1.9) BS03 B01 3.4.21.5 GO:0004252 ... P00734 22366545 MOAD: Ki=1.9uM
    PDBbind: -logKd/Ki=5.72, Ki=1.9uM
    10582 3shj:K (2.8) BS01 H10 3.4.25.1 GO:0004298 ... P30656 22105886 PDBbind: -logKd/Ki=7.47, Ki=34nM
    10583 3shj:L (2.8) BS01 H10 3.4.25.1 GO:0000502 ... P23724 22105886 PDBbind: -logKd/Ki=7.47, Ki=34nM
    10584 3shy:A (2.647) BS01 5FO 3.1.4.35 GO:0004114 ... O76074 21714539 PDBbind: -logKd/Ki=7.04, IC50=90.9nM
    BindingDB: Kd=1700nM
    10585 3shz:A (2.449) BS01 5CO 3.1.4.35 GO:0004114 ... O76074 21714539 MOAD: ic50=35.9nM
    PDBbind: -logKd/Ki=7.44, IC50=35.9nM
    BindingDB: Kd=770nM
    10586 3si3:H (1.55) BS03 B03 3.4.21.5 GO:0004252 ... P00734 22366545 MOAD: Ki=69.3uM
    PDBbind: -logKd/Ki=4.16, Ki=69.3uM
    10587 3si4:H (1.27) BS03 B04 3.4.21.5 GO:0004252 ... P00734 22366545 MOAD: Ki=132.2uM
    PDBbind: -logKd/Ki=3.88, Ki=132.2uM
    10588 3sie:A (1.93) BS01 5BO 3.1.4.35 GO:0004114 ... O76074 21714539 MOAD: ic50=13.3nM
    PDBbind: -logKd/Ki=7.88, IC50=13.3nM
    BindingDB: Kd=420nM
    10589 3sio:A (2.32) BS01 MLK ? GO:0004888 ... Q8WSF8 22009746 PDBbind: -logKd/Ki=8.00, Ki=10nM
    10590 3sio:A (2.32) BS02 MLK ? GO:0004888 ... Q8WSF8 22009746 PDBbind: -logKd/Ki=8.00, Ki=10nM
    10591 3sio:E (2.32) BS01 MLK ? GO:0004888 ... Q8WSF8 22009746 PDBbind: -logKd/Ki=8.00, Ki=10nM
    10592 3sio:E (2.32) BS02 MLK ? GO:0004888 ... Q8WSF8 22009746 PDBbind: -logKd/Ki=8.00, Ki=10nM
    10593 3siu:A (2.626) BS01 rna ? GO:0000398 ... P55769 21784869 PDBbind: Kd=8uM
    10594 3siu:B (2.626) BS01 rna ? GO:0000244 ... Q8WWY3 21784869 PDBbind: Kd=8uM
    10595 3siu:D (2.626) BS01 rna ? GO:0000398 ... P55769 21784869 PDBbind: Kd=8uM
    10596 3siu:E (2.626) BS01 rna ? GO:0000244 ... Q8WWY3 21784869 PDBbind: Kd=8uM
    10597 3sjf:A (1.65) BS04 JRG 3.4.17.21 GO:0004180 ... Q04609 21923190 MOAD: Ki=23nM
    PDBbind: -logKd/Ki=7.64, Ki=23nM
    BindingDB: Ki=23nM
    10598 3sji:A (1.798) BS01 AG7 3.4.22.28 GO:0004197 ... C8CIL7 21795339 PDBbind: -logKd/Ki=5.69, IC50=2.06uM
    10599 3sjo:A (1.702) BS01 AG7 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15    		 GO:0004197 ... E0WWC7 21795339 PDBbind: -logKd/Ki=5.78, IC50=1.65uM
    10600 3sjt:A (1.597) BS03 5AB 3.5.3.1 GO:0000050 ... P05089 21728378 PDBbind: -logKd/Ki=6.06, Kd=0.88uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218