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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    9801 3olg:A (2.3) BS09 HSD 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=7.84, Ki=14.3nM
    9802 3olg:A (2.3) BS11 GLC 3.2.1.1 GO:0003824 ... P04746 21111049 PDBbind: -logKd/Ki=7.84, Ki=14.3nM
    9803 3omm:A (2.1) BS02 OMM ? GO:0003677 ... Q96RI1 21269824 PDBbind: -logKd/Ki=7.43, IC50=37nM
    BindingDB: EC50=300nM, IC50=37nM
    9804 3on0:A (2.874) BS01 dna ? GO:0003677 ... P33788 21565799 PDBbind: Kd=4.8nM
    9805 3on0:B (2.874) BS01 dna ? GO:0003677 ... P33788 21565799 PDBbind: Kd=4.8nM
    9806 3on0:C (2.874) BS01 dna ? GO:0003677 ... P33788 21565799 PDBbind: Kd=4.8nM
    9807 3on0:D (2.874) BS01 dna ? GO:0003677 ... P33788 21565799 PDBbind: Kd=4.8nM
    9808 3oof:A (2.29) BS02 OOF ? GO:0003677 ... Q96RI1 21269824 PDBbind: -logKd/Ki=7.30, IC50=50nM
    BindingDB: IC50=50nM, EC50=2500nM
    9809 3ook:A (2.29) BS02 OOK ? GO:0003677 ... Q96RI1 21269824 PDBbind: -logKd/Ki=8.40, IC50=4nM
    BindingDB: IC50=4nM, EC50=1400nM
    9810 3ool:A (2.3) BS01 dna 3.1.-.- GO:0004519 ... P03882 21029741 PDBbind: Kd=20nM
    9811 3ool:A (2.3) BS02 dna 3.1.-.- GO:0004519 ... P03882 21029741 PDBbind: Kd=20nM
    9812 3oor:A (2.5) BS01 dna 3.1.-.- GO:0004519 ... P03882 21029741 PDBbind: Kd=8.2nM
    9813 3oor:A (2.5) BS02 dna 3.1.-.- GO:0004519 ... P03882 21029741 PDBbind: Kd=8.2nM
    9814 3oot:A (2.55) BS01 SSR 3.4.23.15 GO:0004190 ... P00797 20850300 PDBbind: -logKd/Ki=8.70, IC50=2nM
    BindingDB: IC50=2nM
    9815 3ooz:A (1.8) BS01 ZOO 3.4.23.46 GO:0004190 ... P56817 20880704 MOAD: ic50=0.014uM
    PDBbind: -logKd/Ki=7.85, IC50=14nM
    BindingDB: IC50=32nM
    9816 3opm:A (2.72) BS01 LUI 3.4.14.5 GO:0001618 ... P27487 21764322 PDBbind: -logKd/Ki=6.62, IC50=0.24uM
    BindingDB: IC50=240nM
    9817 3opp:A (1.8) BS01 SA2 3.5.2.6 GO:0008800 ... P0AD64 21357298 PDBbind: -logKd/Ki=6.28, Ki=0.53uM
    9818 3opr:A (1.65) BS03 SA2 3.5.2.6 GO:0008800 ... P0AD64 21357298 PDBbind: -logKd/Ki=6.59, Ki=0.26uM
    9819 3oqf:A (2.78) BS01 S51 3.4.23.15 GO:0004190 ... P00797 20850300 PDBbind: -logKd/Ki=7.04, IC50=91nM
    BindingDB: IC50=91nM
    9820 3oqk:A (2.9) BS01 S52 3.4.23.15 GO:0004190 ... P00797 20850300 PDBbind: -logKd/Ki=6.38, IC50=420nM
    BindingDB: IC50=420nM
    9821 3oqm:A (2.96) BS01 dna ? GO:0000976 ... P25144 21106498 PDBbind: Kd=1.6nM
    9822 3oqm:A (2.96) BS02 dna ? GO:0000976 ... P25144 21106498 PDBbind: Kd=1.6nM
    9823 3oqm:C (2.96) BS01 dna ? GO:0000976 ... P25144 21106498 PDBbind: Kd=1.6nM
    9824 3oqm:C (2.96) BS02 dna ? GO:0000976 ... P25144 21106498 PDBbind: Kd=1.6nM
    9825 3oqn:A (3.3) BS01 dna ? GO:0000976 ... P25144 21106498 PDBbind: Kd=3.0nM
    9826 3oqn:A (3.3) BS02 dna ? GO:0000976 ... P25144 21106498 PDBbind: Kd=3.0nM
    9827 3oqn:C (3.3) BS01 dna ? GO:0000976 ... P25144 21106498 PDBbind: Kd=3.0nM
    9828 3oqn:C (3.3) BS02 dna ? GO:0000976 ... P25144 21106498 PDBbind: Kd=3.0nM
    9829 3orn:A (2.8) BS03 3OR 2.7.12.2 GO:0004672 ... Q02750 21316218 PDBbind: -logKd/Ki=9.62, Kd=0.24nM
    BindingDB: IC50=8.8nM, Kd=0.24nM
    9830 3os3:A (2.8) BS02 3OS 2.7.12.2 GO:0004672 ... Q02750 21316218 PDBbind: -logKd/Ki=6.63, IC50=235nM
    9831 3osf:A (2.032) BS01 dna ? N/A Q58HP3 21771861 PDBbind: Kd=32.3nM
    9832 3osf:A (2.032) BS02 dna ? N/A Q58HP3 21771861 PDBbind: Kd=32.3nM
    9833 3osf:D (2.032) BS01 dna ? N/A Q58HP3 21771861 PDBbind: Kd=32.3nM
    9834 3osf:D (2.032) BS02 dna ? N/A Q58HP3 21771861 PDBbind: Kd=32.3nM
    9835 3osg:A (1.997) BS01 dna ? N/A Q58HP3 21771861 PDBbind: Kd=110nM
    9836 3osg:A (1.997) BS02 dna ? N/A Q58HP3 21771861 PDBbind: Kd=110nM
    9837 3osg:D (1.997) BS01 dna ? N/A Q58HP3 21771861 PDBbind: Kd=110nM
    9838 3osg:D (1.997) BS02 dna ? N/A Q58HP3 21771861 PDBbind: Kd=110nM
    9839 3osi:A (2.7) BS01 XDH ? GO:0003677 ... P37231 21561829 PDBbind: -logKd/Ki=5.22, IC50=6uM
    9840 3osw:A (2.55) BS01 XDI ? GO:0003677 ... P37231 21561829 PDBbind: -logKd/Ki=6.15, IC50=0.7uM
    9841 3ot3:A (1.44) BS01 22K 2.7.11.1 GO:0000077 ... O14757 21094607 MOAD: ic50=0.005uM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    9842 3ot8:A (1.6455) BS01 MI5 2.7.11.1 GO:0000077 ... O14757 21094608 MOAD: ic50=0.009uM
    PDBbind: -logKd/Ki=8.05, IC50=9nM
    BindingDB: IC50=9nM
    9843 3otf:A (2.4) BS01 CMP ? N/A Q9Y3Q4 20829353 MOAD: Kd=0.83uM
    PDBbind: -logKd/Ki=6.08, Kd=0.83uM
    9844 3otq:A (3.0) BS01 MZL 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 20934334 PDBbind: -logKd/Ki=7.39, IC50=41nM
    BindingDB: IC50=41nM
    9845 3otx:A (1.55) BS01 AP5 2.7.1.20 GO:0004001 ... Q584S0 21629723 MOAD: ic50=29.4uM
    PDBbind: -logKd/Ki=4.53, IC50=29.4uM
    9846 3ouh:A (2.51) BS02 014 1.14.11.29 GO:0005506 ... Q9GZT9 24900242 PDBbind: -logKd/Ki=7.10, IC50=79nM
    BindingDB: IC50=79.43nM
    9847 3oui:A (1.7) BS02 42Z 1.14.11.29 GO:0005506 ... Q9GZT9 24900242 PDBbind: -logKd/Ki=4.90, IC50=12.6uM
    BindingDB: IC50=12589.25nM
    9848 3oui:A (1.7) BS03 42Z 1.14.11.29 GO:0005506 ... Q9GZT9 24900242 PDBbind: -logKd/Ki=4.90, IC50=12.6uM
    BindingDB: IC50=12589.25nM
    9849 3ouj:A (2.3) BS02 AKG 1.14.11.29 GO:0005506 ... Q9GZT9 24900242 PDBbind: -logKd/Ki=6.05, Kd=900nM
    9850 3ovn:A (1.95) BS02 MPV 3.1.13.2
    3.1.26.13    		 GO:0003676 ... Q72498 21275048 MOAD: Kd=2.8mM
    PDBbind: -logKd/Ki=2.55, Kd=2.8mM
    9851 3ovn:A (1.95) BS03 MPV 3.1.13.2
    3.1.26.13    		 GO:0003676 ... Q72498 21275048 MOAD: Kd=2.8mM
    PDBbind: -logKd/Ki=2.55, Kd=2.8mM
    9852 3ovn:B (1.95) BS03 MPV 3.1.13.2
    3.1.26.13    		 GO:0003676 ... Q72498 21275048 MOAD: Kd=2.8mM
    PDBbind: -logKd/Ki=2.55, Kd=2.8mM
    9853 3ovn:B (1.95) BS04 MPV 3.1.13.2
    3.1.26.13    		 GO:0003676 ... Q72498 21275048 MOAD: Kd=2.8mM
    PDBbind: -logKd/Ki=2.55, Kd=2.8mM
    9854 3ovx:A (1.49) BS01 O64 3.4.22.27 GO:0006508 ... P25774 21030256 PDBbind: -logKd/Ki=7.51, IC50=31nM
    BindingDB: IC50=31nM
    9855 3ovz:A (2.02) BS01 O96 3.4.22.38 GO:0006508 ... P43235 21030256 PDBbind: -logKd/Ki=8.06, IC50=8.7nM
    BindingDB: IC50=8.7nM
    9856 3ow3:A (1.9) BS02 SMY 2.7.11.11 GO:0000122 ... P05132 20971641 MOAD: ic50=742nM
    PDBbind: -logKd/Ki=6.13, IC50=742nM
    9857 3ow4:A (2.6) BS02 SMY 2.7.11.1 GO:0004672 ... P31749 20971641 PDBbind: -logKd/Ki=7.66, IC50=22nM
    BindingDB: IC50=22nM
    9858 3ow6:A (1.8) BS01 MEX 3.6.4.10 GO:0005524 ... P07900 21106457 PDBbind: -logKd/Ki=6.66, IC50=0.22uM
    BindingDB: IC50=220nM
    9859 3owb:A (2.05) BS01 BSM 3.6.4.10 GO:0005524 ... P07900 21106457 PDBbind: -logKd/Ki=7.72, IC50=19nM
    9860 3owd:A (1.63) BS01 MEY 3.6.4.10 GO:0005524 ... P07900 21106457 PDBbind: -logKd/Ki=7.52, IC50=30nM
    BindingDB: EC50=190nM, IC50=550nM
    9861 3owj:A (1.85) BS01 1EL 2.7.11.1 GO:0004672 ... P68400 21118972 MOAD: Ki=0.86uM
    PDBbind: -logKd/Ki=6.07, Ki=0.86uM
    9862 3owk:A (1.8) BS01 18E 2.7.11.1 GO:0004672 ... P68400 21118972 MOAD: ic50=1.5uM
    PDBbind: -logKd/Ki=5.82, IC50=1.5uM
    9863 3owl:A (2.1) BS01 19E 2.7.11.1 GO:0004672 ... P68400 21118972 MOAD: ic50=0.67uM
    PDBbind: -logKd/Ki=6.17, IC50=670nM
    9864 3own:A (2.0) BS01 3OX 3.4.23.15 GO:0004190 ... P00797 21112780 MOAD: Ki=34nM
    PDBbind: -logKd/Ki=7.47, Ki=34nM
    9865 3oxc:A (1.16) BS01 ROC 3.4.23.16 GO:0004190 ... Q7SSI0 17243183 MOAD: Ki=3.9nM
    PDBbind: -logKd/Ki=8.41, Ki=3.9nM
    9866 3oxc:B (1.16) BS01 ROC 3.4.23.16 GO:0004190 ... Q7SSI0 17243183 PDBbind: -logKd/Ki=8.41, Ki=3.9nM
    9867 3oxi:A (2.2) BS02 SYY 2.7.11.24 GO:0004672 ... P53779 21071223 MOAD: ic50=2.2uM
    PDBbind: -logKd/Ki=5.66, IC50=2.2uM
    BindingDB: IC50=2200nM
    9868 3oxz:A (2.2) BS01 0LI 2.7.10.2 GO:0004672 ... P00520 21118377 MOAD: ic50=8.6nM
    PDBbind: -logKd/Ki=8.07, IC50=8.6nM
    9869 3oy0:A (1.6) BS02 OY0 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21506569 MOAD: Ki=10.1nM
    PDBbind: -logKd/Ki=8.00, Ki=10.1nM
    BindingDB: Ki=10.1nM
    9870 3oy1:A (1.7) BS01 589 2.7.11.24 GO:0004672 ... P53779 21112785 MOAD: ic50=0.016uM
    PDBbind: -logKd/Ki=7.80, IC50=16nM
    BindingDB: IC50=16nM
    9871 3oy3:A (1.95) BS01 XY3 2.7.10.2 GO:0004672 ... P00520 21118377 MOAD: ic50=35.8nM
    PDBbind: -logKd/Ki=7.45, IC50=35.8nM
    9872 3oy8:A (2.19) BS01 GCO ? GO:0002317 ... P09382 20826047 PDBbind: -logKd/Ki=3.66, Kd=220uM
    9873 3oy8:A (2.19) BS02 GAL ? GO:0002317 ... P09382 20826047 PDBbind: -logKd/Ki=3.66, Kd=220uM
    9874 3oyl:A (2.54) BS06 ZZX 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-    		 GO:0003676 ... P14350 21030679 PDBbind: -logKd/Ki=6.70, IC50=200nM
    9875 3oyn:A (2.68) BS06 ZZX 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-    		 GO:0003676 ... P14350 21030679 PDBbind: -logKd/Ki=7.60, IC50=25nM
    9876 3oyq:A (1.47) BS02 OYQ 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21506569 MOAD: Ki=10.3nM
    PDBbind: -logKd/Ki=7.99, Ki=10.3nM
    9877 3oys:A (1.538) BS02 OYS 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21506569 MOAD: Ki=9nM
    PDBbind: -logKd/Ki=8.05, Ki=9nM
    BindingDB: Ki=107nM
    9878 3oz1:A (3.0) BS02 BMB 2.3.2.27 N/A Q13490 20954235 PDBbind: -logKd/Ki=8.70, IC50<2nM
    BindingDB: IC50=<2nM
    9879 3ozg:A (1.993) BS01 SSI 2.4.2.22
    2.4.2.8    		 GO:0000166 ... P20035 22726686 MOAD: Ki=0.65nM
    PDBbind: -logKd/Ki=9.19, Ki=0.65nM
    9880 3ozj:A (2.1) BS02 BGV ? GO:0003677 ... P19793 21262235 PDBbind: -logKd/Ki=5.11, Kd=7.7uM
    9881 3ozp:A (2.0) BS01 OAN 3.2.1.52 GO:0000272 ... Q06GJ0 21692744 MOAD: Ki=0.24uM
    PDBbind: -logKd/Ki=6.62, Ki=0.24uM
    9882 3ozr:A (1.73) BS02 OZR 2.1.1.6 GO:0000287 ... P22734 21538606 MOAD: Ki=7022nM
    PDBbind: -logKd/Ki=5.15, Ki=7022nM
    9883 3ozs:A (1.44) BS02 OZS 2.1.1.6 GO:0000287 ... P22734 21538606 MOAD: Ki=4645nM
    PDBbind: -logKd/Ki=5.33, Ki=4645nM
    9884 3ozt:A (1.48) BS02 OZZ 2.1.1.6 GO:0000287 ... P22734 21538606 MOAD: Ki=74.9uM
    PDBbind: -logKd/Ki=4.13, Ki=74.9uM
    9885 3p0g:A (3.5) BS01 P0G 3.2.1.17 GO:0003796 ... P00720
    P07550    		 21228869 PDBbind: -logKd/Ki=10.08, Kd=84pM
    9886 3p17:H (1.43) BS03 99P 3.4.21.5 GO:0004252 ... P00734 22366545 MOAD: Ki=33.4uM
    PDBbind: -logKd/Ki=4.48, Ki=33.4uM
    9887 3p1d:A (1.86) BS01 MB3 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92793 22464331 PDBbind: -logKd/Ki=2.64, IC50=2.3mM
    BindingDB: IC50=2300000nM
    9888 3p23:A (2.7) BS02 ADP 2.7.11.1
    3.1.26.-    		 GO:0004521 ... O75460 21317875 PDBbind: -logKd/Ki=4.42, IC50=38uM
    9889 3p2e:A (1.68) BS01 SAH 2.1.1.180 GO:0008168 ... A8C927 21062819 MOAD: Kd=0.6uM
    PDBbind: -logKd/Ki=6.22, Kd=0.6uM
    9890 3p2h:A (2.0) BS02 NOO 2.3.1.184 GO:0007165 ... Q4VSJ8 21730159 PDBbind: -logKd/Ki=5.44, Kd=3.6uM
    9891 3p2k:A (2.7) BS01 SAM 2.1.1.180 GO:0008168 ... A8C927 21062819 PDBbind: -logKd/Ki=4.70, Kd=20uM
    9892 3p3g:A (1.65) BS02 3P3 N/A GO:0008759 ... N/A 21167751 MOAD: Ki=0.18nM
    PDBbind: -logKd/Ki=9.74, Ki=180pM
    9893 3p3h:A (1.5) BS02 84A 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22258283 PDBbind: -logKd/Ki=7.44, Ki=36nM
    9894 3p3j:A (1.6) BS01 498 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22258283 PDBbind: -logKd/Ki=7.92, Ki=12nM
    9895 3p3r:A (1.25) BS01 3M1 ? GO:0005179 ... P02766 21865539 PDBbind: -logKd/Ki=7.25, Kd=56.05nM
    BindingDB: IC50=755nM, Kd=184nM
    9896 3p3r:B (1.25) BS01 3M1 ? GO:0005179 ... P02766 21865539 PDBbind: -logKd/Ki=7.25, Kd=56.05nM
    BindingDB: IC50=755nM, Kd=184nM
    9897 3p3s:A (1.6) BS01 3M2 ? GO:0005179 ... P02766 21865539 PDBbind: -logKd/Ki=7.59, Kd=26nM
    9898 3p3s:A (1.6) BS02 3M2 ? GO:0005179 ... P02766 21865539 PDBbind: -logKd/Ki=7.59, Kd=26nM
    9899 3p3s:B (1.6) BS01 3M2 ? GO:0005179 ... P02766 21865539 PDBbind: -logKd/Ki=7.59, Kd=26nM
    9900 3p3s:B (1.6) BS02 3M2 ? GO:0005179 ... P02766 21865539 PDBbind: -logKd/Ki=7.59, Kd=26nM
    9901 3p3t:A (1.45) BS01 3M3 ? GO:0005179 ... P02766 21865539 PDBbind: -logKd/Ki=7.24, Kd=57.91nM
    BindingDB: IC50=296nM, Kd=320nM
    9902 3p3t:B (1.45) BS01 3M3 ? GO:0005179 ... P02766 21865539 PDBbind: -logKd/Ki=7.24, Kd=57.91nM
    BindingDB: IC50=296nM, Kd=320nM
    9903 3p3u:A (1.5) BS01 3M4 ? GO:0005179 ... P02766 21865539 PDBbind: -logKd/Ki=6.48, IC50=0.3291uM
    BindingDB: IC50=329nM
    9904 3p3u:B (1.5) BS01 3M4 ? GO:0005179 ... P02766 21865539 PDBbind: -logKd/Ki=6.48, IC50=0.3291uM
    BindingDB: IC50=329nM
    9905 3p44:A (2.2) BS01 067 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22258283 PDBbind: -logKd/Ki=8.01, Ki=9.7nM
    9906 3p4q:A (3.35) BS02 OAA 1.3.5.1 GO:0000104 ... P00363 21098488 PDBbind: -logKd/Ki=6.52, Ki=0.3uM
    9907 3p4r:A (3.05) BS02 GUA 1.3.5.1 GO:0000104 ... P00363 21098488 PDBbind: -logKd/Ki=2.72, Ki=1.9mM
    9908 3p4v:A (2.0) BS02 PMX 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21332115 MOAD: Ki=8uM
    PDBbind: -logKd/Ki=5.10, Ki=8uM
    BindingDB: Ki=8000nM
    9909 3p4w:A (3.2) BS01 DSF ? GO:0004888 ... Q7NDN8 21248852 PDBbind: -logKd/Ki=4.57, IC50=27uM
    9910 3p4w:B (3.2) BS01 DSF ? GO:0004888 ... Q7NDN8 21248852 PDBbind: -logKd/Ki=4.57, IC50=27uM
    9911 3p50:A (3.3) BS01 PFL ? GO:0004888 ... Q7NDN8 21248852 PDBbind: -logKd/Ki=4.62, IC50=24uM
    9912 3p55:A (2.0) BS01 670 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22258283 PDBbind: -logKd/Ki=7.10, Ki=80nM
    9913 3p58:A (1.49) BS02 P58 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22218610 MOAD: Ki=25.4nM
    PDBbind: -logKd/Ki=7.60, Ki=25.4nM
    9914 3p5k:A (2.09) BS01 P5K 2.7.11.24 GO:0000077 ... P47811 22014550 MOAD: ic50=0.076uM
    PDBbind: -logKd/Ki=7.12, IC50=0.076uM
    9915 3p5l:A (1.498) BS02 IT5 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22218610 MOAD: Ki=40.8nM
    PDBbind: -logKd/Ki=7.39, Ki=40.8nM
    9916 3p5o:A (1.6) BS01 EAM ? N/A O60885 21068722 MOAD: Kd=55.2nM
    PDBbind: -logKd/Ki=7.26, Kd=55.2nM
    BindingDB: IC50=190nM, Ki=50nM, Kd=99nM
    9917 3p76:A (1.93) BS01 P76 3.5.1.108 GO:0006796 ... O67648 21273067 PDBbind: -logKd/Ki=8.68, IC50=2.1nM
    9918 3p78:A (2.3) BS01 P78 2.7.11.24 GO:0000077 ... P47811 22014550 MOAD: ic50=0.11uM
    PDBbind: -logKd/Ki=6.96, IC50=0.11uM
    9919 3p79:A (2.1) BS01 P79 2.7.11.24 GO:0000077 ... P47811 22014550 MOAD: ic50=2.3uM
    PDBbind: -logKd/Ki=5.64, IC50=2.3uM
    9920 3p7a:A (2.31) BS01 P7A 2.7.11.24 GO:0000077 ... P47811 22014550 MOAD: ic50=0.52uM
    PDBbind: -logKd/Ki=6.28, IC50=0.52uM
    9921 3p7b:A (1.9) BS01 P7B 2.7.11.24 GO:0000077 ... P47811 22014550 MOAD: ic50=0.018uM
    PDBbind: -logKd/Ki=7.74, IC50=0.018uM
    9922 3p7c:A (2.3) BS01 P7C 2.7.11.24 GO:0000077 ... P47811 22014550 MOAD: ic50=0.022uM
    PDBbind: -logKd/Ki=7.66, IC50=0.022uM
    9923 3p7i:A (1.71) BS01 P7I ? GO:0015716 ... Q1R3F7 22019591 MOAD: Kd=19.9nM
    PDBbind: -logKd/Ki=7.70, Kd=19.9nM
    9924 3p8e:A (2.4946) BS01 LN7 3.5.3.18 GO:0000052 ... O94760 20979083 PDBbind: -logKd/Ki=5.15, Kd=7uM
    9925 3p8h:A (2.55) BS01 P8H ? GO:0005634 ... Q9Y468 21417280 PDBbind: -logKd/Ki=5.30, Kd=5uM
    BindingDB: IC50=21000nM
    9926 3p8n:A (1.9) BS02 L4T 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0006508 ... P26662 21270126 MOAD: Ki=0.53nM
    PDBbind: -logKd/Ki=9.28, Ki=0.53nM
    9927 3p8o:A (2.3) BS02 L5T 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0006508 ... P26662 21270126 MOAD: Ki=1.89nM
    PDBbind: -logKd/Ki=8.72, Ki=1.89nM
    9928 3p8p:A (2.5) BS01 LN6 3.5.3.18 GO:0000052 ... O94760 20979083 MOAD: Kd=28uM
    PDBbind: -logKd/Ki=4.55, Kd=28uM
    9929 3p8z:A (1.7) BS01 36A 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13    		 GO:0004482 ... P27915 21147775 PDBbind: -logKd/Ki=6.09, Ki=0.82uM
    9930 3p9j:A (2.8) BS01 P9J 2.7.11.1 GO:0000212 ... O14965 21128645 PDBbind: -logKd/Ki=7.51, IC50=31nM
    9931 3p9t:A (2.02) BS01 TCL ? GO:0000976 ... Q8KLP4 21738470 MOAD: Kd=0.63uM
    PDBbind: -logKd/Ki=6.20, Kd=0.63uM
    9932 3p9t:A (2.02) BS02 TCL ? GO:0000976 ... Q8KLP4 21738470 MOAD: Kd=0.63uM
    PDBbind: -logKd/Ki=6.20, Kd=0.63uM
    9933 3pa3:A (1.4) BS01 C70 2.7.11.1 GO:0000077 ... O14757 21074424 MOAD: ic50=1nM
    PDBbind: -logKd/Ki=9.00, IC50=1nM
    BindingDB: IC50=1nM
    9934 3pa4:A (1.59) BS01 C72 2.7.11.1 GO:0000077 ... O14757 21074424 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3nM
    9935 3pa5:A (1.7) BS01 C73 2.7.11.1 GO:0000077 ... O14757 21074424 MOAD: ic50=2nM
    PDBbind: -logKd/Ki=8.70, IC50=2nM
    BindingDB: IC50=10nM
    9936 3pa8:A (2.0) BS01 621 2.4.1.- N/A Q189K3 21095570 PDBbind: -logKd/Ki=5.75, IC50=1.78uM
    9937 3pax:A (2.4) BS01 3MB 2.4.2.-
    2.4.2.30    		 GO:0003950 ... P26446 9521710 MOAD: ic50=10uM
    PDBbind: -logKd/Ki=5.00, IC50=10uM
    9938 3pb3:A (1.9) BS01 SAH 2.1.1.180 GO:0008168 ... A8C927 21062819 PDBbind: -logKd/Ki=6.22, Kd=0.6uM
    9939 3pb7:X (1.4) BS01 PBD 2.3.2.5 GO:0016603 ... Q9NXS2 21288892 MOAD: Ki=1.817uM
    PDBbind: -logKd/Ki=5.74, Ki=1.817uM
    9940 3pb8:X (1.13) BS01 AHN 2.3.2.5 GO:0016603 ... Q9NXS2 21288892 MOAD: Ki=5.748uM
    PDBbind: -logKd/Ki=5.24, Ki=5.748uM
    9941 3pb9:X (1.12) BS01 1BN 2.3.2.5 GO:0016603 ... Q9NXS2 21288892 MOAD: Ki=0.262uM
    PDBbind: -logKd/Ki=6.58, Ki=0.262uM
    9942 3pbb:A (1.95) BS01 PBD 2.3.2.5 GO:0005515 ... Q16769 21288892 MOAD: Ki=0.095uM
    PDBbind: -logKd/Ki=7.02, Ki=0.095uM
    BindingDB: Ki=60nM, IC50=5300nM
    9943 3pcb:M (2.19) BS02 3HB 1.13.11.3 GO:0003824 ... P00437 9254599 MOAD: Ki=4mM
    PDBbind: -logKd/Ki=2.40, Ki=4mM
    9944 3pce:M (2.06) BS02 3HP 1.13.11.3 GO:0003824 ... P00437 9254599 MOAD: Ki=10mM
    PDBbind: -logKd/Ki=2.00, Ki=10mM
    9945 3pce:P (2.06) BS02 3HP 1.13.11.3 GO:0003824 ... P00437 9254599 MOAD: Ki=10mM
    PDBbind: -logKd/Ki=2.00, Ki=10mM
    9946 3pcf:A (2.15) BS01 FHB 1.13.11.3 GO:0003824 ... P00436 9254599 PDBbind: -logKd/Ki=6.05, Ki=0.9uM
    9947 3pcf:B (2.15) BS01 FHB 1.13.11.3 GO:0003824 ... P00436 9254599 PDBbind: -logKd/Ki=6.05, Ki=0.9uM
    9948 3pcf:M (2.15) BS02 FHB 1.13.11.3 GO:0003824 ... P00437 9254599 MOAD: Ki=0.9uM
    PDBbind: -logKd/Ki=6.05, Ki=0.9uM
    9949 3pcf:M (2.15) BS03 FHB 1.13.11.3 GO:0003824 ... P00437 9254599 MOAD: Ki=0.9uM
    PDBbind: -logKd/Ki=6.05, Ki=0.9uM
    9950 3pcg:M (1.96) BS02 4HP 1.13.11.3 GO:0003824 ... P00437 9254599 MOAD: Ki=5mM
    PDBbind: -logKd/Ki=2.30, Ki=5mM
    9951 3pch:A (2.05) BS01 CHB 1.13.11.3 GO:0003824 ... P00436 9254599 PDBbind: -logKd/Ki=5.40, Ki=4uM
    9952 3pch:B (2.05) BS01 CHB 1.13.11.3 GO:0003824 ... P00436 9254599 PDBbind: -logKd/Ki=5.40, Ki=4uM
    9953 3pch:M (2.05) BS02 CHB 1.13.11.3 GO:0003824 ... P00437 9254599 MOAD: Ki=4uM
    PDBbind: -logKd/Ki=5.40, Ki=4uM
    9954 3pcj:M (2.13) BS02 INO 1.13.11.3 GO:0003824 ... P00437 9254600 MOAD: Kd=0.06uM
    PDBbind: -logKd/Ki=7.22, Kd=0.06uM
    9955 3pck:M (2.13) BS02 NNO 1.13.11.3 GO:0003824 ... P00437 9254600 MOAD: Kd=0.2uM
    PDBbind: -logKd/Ki=6.70, Kd=0.2uM
    9956 3pcn:A (2.4) BS01 DHY 1.13.11.3 GO:0003824 ... P00436 9298971 PDBbind: -logKd/Ki=3.66, Kd=220uM
    9957 3pcn:M (2.4) BS02 DHY 1.13.11.3 GO:0003824 ... P00437 9298971 MOAD: Kd=220uM
    PDBbind: -logKd/Ki=3.66, Kd=220uM
    9958 3pcu:A (2.0) BS02 LX8 ? GO:0003677 ... P19793 22384078 PDBbind: -logKd/Ki=5.29, Kd=5.08uM
    9959 3pd2:A (1.86) BS01 A3S 6.1.1.3 GO:0004829 ... Q9UZ14 21098258 MOAD: Kd=3.4uM
    PDBbind: -logKd/Ki=5.47, Kd=3.4uM
    9960 3pd2:B (1.86) BS01 A3S 6.1.1.3 GO:0004829 ... Q9UZ14 21098258 MOAD: Kd=3.4uM
    PDBbind: -logKd/Ki=5.47, Kd=3.4uM
    9961 3pd3:A (1.86) BS01 A3T 6.1.1.3 GO:0004829 ... Q9UZ14 21098258 MOAD: Kd=36.2uM
    PDBbind: -logKd/Ki=4.44, Kd=36.2uM
    9962 3pd3:B (1.86) BS01 A3T 6.1.1.3 GO:0004829 ... Q9UZ14 21098258 MOAD: Kd=36.2uM
    PDBbind: -logKd/Ki=4.44, Kd=36.2uM
    9963 3pd4:A (2.4) BS01 A3G 6.1.1.3 GO:0004829 ... Q9UZ14 21098258 MOAD: Kd=33.3uM
    PDBbind: -logKd/Ki=4.48, Kd=33.2uM
    9964 3pd4:B (2.4) BS01 A3G 6.1.1.3 GO:0004829 ... Q9UZ14 21098258 MOAD: Kd=33.3uM
    PDBbind: -logKd/Ki=4.48, Kd=33.2uM
    9965 3pd8:A (2.476) BS02 HA7 ? GO:0015276 ... P19491 21067182 MOAD: Ki=108nM
    PDBbind: -logKd/Ki=6.46, Ki=348nM
    9966 3pd9:A (2.1) BS01 HA5 ? GO:0015276 ... P19491 21067182 MOAD: Ki=494nM
    PDBbind: -logKd/Ki=6.22, Ki=600nM
    9967 3pdc:A (2.6) BS01 ZYI 3.1.3.76
    3.3.2.10    		 GO:0003824 ... P34913 21302953 PDBbind: -logKd/Ki=7.49, IC50=32nM
    9968 3pdq:A (1.989) BS02 KC6 1.14.11.66
    1.14.11.69    		 N/A O75164 21412984 MOAD: ic50=0.18uM
    PDBbind: -logKd/Ki=6.74, IC50=180nM
    9969 3pe1:A (1.6) BS01 3NG 2.7.11.1 GO:0004672 ... P68400 21870818 MOAD: Ki=0.223nM
    PDBbind: -logKd/Ki=9.65, Ki=0.223nM
    BindingDB: IC50=2000nM, Kd=0.562341nM, Ki=0.380000nM
    9970 3pe2:A (1.9) BS01 E1B 2.7.11.1 GO:0004672 ... P68400 21870818 MOAD: Ki=0.175nM
    PDBbind: -logKd/Ki=9.76, Ki=0.175nM
    BindingDB: IC50=6nM, Ki=420nM
    9971 3peq:A (2.4) BS01 3EQ ? GO:0003677 ... Q03181 21414782 MOAD: ic50=31.6nM
    PDBbind: -logKd/Ki=7.50, IC50=31.6nM
    9972 3pf4:B (1.38) BS01 rna ? GO:0003676 ... P32081 22128343 PDBbind: Kd=159nM
    9973 3pf5:A (1.68) BS01 rna ? GO:0003676 ... P32081 22128343 PDBbind: Kd=336nM
    9974 3pf5:B (1.68) BS01 rna ? GO:0003676 ... P32081 22128343 PDBbind: Kd=336nM
    9975 3pfp:B (2.35) BS02 036 2.5.1.54 GO:0003849 ... O53512 21454647 PDBbind: -logKd/Ki=6.44, Ki=360nM
    9976 3pgl:A (2.35) BS02 RZX 3.1.3.16 GO:0008420 ... Q9GZU7 21348431 MOAD: Ki=5uM
    PDBbind: -logKd/Ki=5.30, Ki=5uM
    9977 3phe:A (2.2) BS01 C9A 2.7.7.48
    3.6.4.13    		 GO:0000166 ... D0PY27 21145235 MOAD: ic50=0.016uM
    PDBbind: -logKd/Ki=7.80, IC50=16nM
    9978 3pi5:A (2.4) BS01 3P5 3.4.23.46 GO:0004190 ... P56817 21388807 MOAD: ic50=0.95uM
    PDBbind: -logKd/Ki=6.02, IC50=950nM
    BindingDB: IC50=950nM
    9979 3pih:A (2.9) BS01 dna ? GO:0003677 ... Q9WYV0 21240268 PDBbind: Kd=1.9nM
    9980 3pix:A (1.85) BS01 027 2.7.10.2 GO:0004672 ... Q06187 21280133 MOAD: ic50=0.1uM
    PDBbind: -logKd/Ki=7.00, IC50=0.1uM
    9981 3piy:A (2.55) BS01 585 2.7.10.2 GO:0004672 ... Q06187 21280133 PDBbind: -logKd/Ki=6.54, IC50=0.29uM
    BindingDB: Kd=190nM
    9982 3piz:A (2.21) BS01 03C 2.7.10.2 GO:0004672 ... Q06187 21280133 MOAD: ic50=3.5uM
    PDBbind: -logKd/Ki=5.46, IC50=3.5uM
    9983 3pj1:A (2.0) BS01 LHL 2.7.10.2 GO:0004672 ... Q06187 21280133 MOAD: ic50=0.048uM
    PDBbind: -logKd/Ki=7.32, IC50=48nM
    9984 3pj1:A (2.0) BS02 LHL 2.7.10.2 GO:0004672 ... Q06187 21280133 MOAD: ic50=0.048uM
    PDBbind: -logKd/Ki=7.32, IC50=48nM
    9985 3pj2:A (1.75) BS01 04K 2.7.10.2 GO:0004672 ... Q06187 21280133 MOAD: ic50=7.2uM
    PDBbind: -logKd/Ki=5.14, IC50=7.2uM
    9986 3pj3:A (1.85) BS01 04L 2.7.10.2 GO:0004672 ... Q06187 21280133 MOAD: ic50=5.6uM
    PDBbind: -logKd/Ki=5.25, IC50=5.6uM
    9987 3pj8:A (1.96) BS01 404 2.7.11.22 GO:0000082 ... P24941 21417417 PDBbind: -logKd/Ki=7.40, IC50=0.04uM
    9988 3pjc:A (2.2) BS01 PJC 2.7.10.2 GO:0004672 ... P52333 21155605 MOAD: ic50=27nM
    PDBbind: -logKd/Ki=7.57, IC50=27nM
    BindingDB: IC50=27nM
    9989 3pjg:A (2.7) BS01 UGA 1.1.1.22 GO:0000166 ... A0A0J9WZA6 21536136 PDBbind: -logKd/Ki=3.55, Ki=283uM
    9990 3pjg:A (2.7) BS02 UGA 1.1.1.22 GO:0000166 ... A0A0J9WZA6 21536136 PDBbind: -logKd/Ki=3.55, Ki=283uM
    9991 3pjt:A (2.5154) BS01 C2E ? N/A Q3KK31 21304926 Manual survey: Kd=13.1uM (21304926)
    PDBbind: -logKd/Ki=4.88, Kd=13.1uM
    9992 3pju:A (2.4991) BS01 C2E ? N/A Q3KK31 21304926 MOAD: Kd=13.1uM
    PDBbind: -logKd/Ki=4.88, Kd=13.1uM
    9993 3pka:A (1.25) BS03 Y02 3.4.11.18 GO:0004177 ... P9WK19 21465667 MOAD: ic50=0.54uM
    PDBbind: -logKd/Ki=6.27, IC50=540nM
    9994 3pkb:A (1.25) BS01 Y16 3.4.11.18 GO:0004177 ... P9WK19 21465667 MOAD: ic50=0.62uM
    PDBbind: -logKd/Ki=6.21, IC50=620nM
    9995 3pkc:A (1.47) BS03 Y08 3.4.11.18 GO:0004177 ... P9WK19 21465667 MOAD: ic50=0.96uM
    PDBbind: -logKd/Ki=6.02, IC50=960nM
    9996 3pkd:A (1.47) BS03 Y10 3.4.11.18 GO:0004177 ... P9WK19 21465667 MOAD: ic50=0.76uM
    PDBbind: -logKd/Ki=6.12, IC50=760nM
    9997 3pke:A (1.6) BS01 Y10 3.4.11.18 GO:0004177 ... P9WK19 21465667 PDBbind: -logKd/Ki=3.60, IC50>250uM
    9998 3pm1:A (2.8) BS01 ET ? GO:0003677 ... P0A0N3 21264225 PDBbind: -logKd/Ki=5.93, Kd=1.18uM
    9999 3pn1:A (2.0) BS01 IVH 6.5.1.2 GO:0003911 ... P43813 21189350 MOAD: Ki=110nM
    PDBbind: -logKd/Ki=6.96, Ki=110nM
    10000 3pn3:A (1.3) BS01 PN3 3.5.1.88 GO:0042586 ... Q9FUZ2 21629676 MOAD: Ki=400nM
    PDBbind: -logKd/Ki=6.40, Ki=400nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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