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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    401 1db1:A (1.8) BS01 VDX ? GO:0003677 ... P11473 10678179 MOAD: Kd=0.55nM
    PDBbind: -logKd/Ki=9.26, Kd=0.55nM
    BindingDB: EC50=10nM, IC50=1.1nM, Kd=0.065nM
    402 1db4:A (2.2) BS03 8IN 3.1.1.4 GO:0004623 ... P14555 7664108 PDBbind: -logKd/Ki=7.24, IC50=0.057uM
    BindingDB: IC50=57.0nM
    403 1db5:A (2.8) BS03 6IN 3.1.1.4 GO:0004623 ... P14555 7664108 PDBbind: -logKd/Ki=6.82, IC50=0.152uM
    BindingDB: IC50=69000nM
    404 1dbb:H (2.7) BS01 STR ? N/A P01868 8496956 PDBbind: -logKd/Ki=9.00, Kd=1nM
    405 1dbb:L (2.7) BS01 STR N/A N/A N/A 8496956 PDBbind: -logKd/Ki=9.00, Kd=1nM
    406 1dbj:H (2.7) BS01 AE2 ? N/A P01868 8413674 PDBbind: -logKd/Ki=7.68, IC50=21nM
    407 1dbk:H (3.0) BS01 ANO ? N/A P01868 8413674 PDBbind: -logKd/Ki=8.10, IC50=8nM
    408 1det:A (1.8) BS01 2GP 4.6.1.24 GO:0001411 ... P00651 8679590 MOAD: Kd=50uM
    PDBbind: -logKd/Ki=4.30, Kd=50uM
    409 1df8:A (1.51) BS01 BTN ? GO:0009374 ... P22629 10850797 MOAD: Kd=0.2nM
    PDBbind: -logKd/Ki=9.70, Kd=0.20nM
    BindingDB: Kd=1.000000nM
    410 1dfo:A (2.4) BS02 FFO 2.1.2.1 GO:0003824 ... P0A825 10656824 PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    411 1dfo:A (2.4) BS04 FFO 2.1.2.1 GO:0003824 ... P0A825 10656824 PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    412 1dfo:B (2.4) BS02 FFO 2.1.2.1 GO:0003824 ... P0A825 10656824 PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    413 1dfo:B (2.4) BS04 FFO 2.1.2.1 GO:0003824 ... P0A825 10656824 PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    414 1dfo:B (2.4) BS05 FFO 2.1.2.1 GO:0003824 ... P0A825 10656824 PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    415 1dgm:A (1.8) BS02 ADN 2.7.1.20 GO:0004001 ... Q9TVW2 10794412 PDBbind: -logKd/Ki=5.05, Ki=8.9uM
    BindingDB: Ki=8900nM
    416 1dh3:A (3.0) BS01 dna ? GO:0003677 ... Q01147 10952992 PDBbind: Kd=1.4nM
    417 1dh3:C (3.0) BS01 dna ? GO:0003677 ... Q01147 10952992 PDBbind: Kd=1.4nM
    418 1dhi:A (1.9) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 8265622 MOAD: Kd=55nM
    PDBbind: -logKd/Ki=7.26, Kd=55nM
    BindingDB: IC50=8.8nM, EC50=1nM
    419 1dhi:B (1.9) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 8265622 MOAD: Kd=55nM
    PDBbind: -logKd/Ki=7.26, Kd=55nM
    BindingDB: IC50=8.8nM, EC50=1nM
    420 1dhj:A (1.8) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 8265622 MOAD: Kd=281nM
    PDBbind: -logKd/Ki=6.55, Kd=281nM
    BindingDB: IC50=8.8nM, EC50=1nM
    421 1dhj:B (1.8) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 8265622 MOAD: Kd=281nM
    PDBbind: -logKd/Ki=6.55, Kd=281nM
    BindingDB: IC50=8.8nM, EC50=1nM
    422 1di8:A (2.2) BS01 DTQ 2.7.11.22 GO:0000082 ... P24941 10633045 MOAD: ic50=1uM
    PDBbind: -logKd/Ki=6.00, IC50=1uM
    BindingDB: IC50=1000nM
    423 1di9:A (2.6) BS01 MSQ 2.7.11.24 GO:0000077 ... Q16539 10633045 PDBbind: -logKd/Ki=5.30, IC50=5uM
    424 1dif:A (1.7) BS01 A85 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 8551523 PDBbind: -logKd/Ki=10.66, Ki=22pM
    425 1dif:B (1.7) BS01 A85 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 8551523 MOAD: Ki=22pM
    PDBbind: -logKd/Ki=10.66, Ki=22pM
    426 1dis:A (-1.00) BS01 BDM 1.5.1.3 GO:0004146 ... P00381 7547901 PDBbind: -logKd/Ki=11.00, Ki<0.01nM
    427 1dl7:H (2.35) BS01 NCH ? GO:0002250 ... P01820 10859335 PDBbind: -logKd/Ki=6.49, Kd=0.32uM
    428 1dl7:L (2.35) BS01 NCH ? GO:0002250 ... P01724 10859335 MOAD: Kd=0.32uM
    PDBbind: -logKd/Ki=6.49, Kd=0.32uM
    429 1dm2:A (2.1) BS01 HMD 2.7.11.22 GO:0000082 ... P24941 10662688 PDBbind: -logKd/Ki=7.15, IC50=70nM
    430 1dmp:A (2.0) BS01 DMQ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 8807858 PDBbind: -logKd/Ki=9.55, Ki=0.28nM
    431 1dmp:B (2.0) BS01 DMQ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 8807858 MOAD: Ki=0.28nM
    PDBbind: -logKd/Ki=9.55, Ki=0.28nM
    432 1dmt:A (2.1) BS02 RDF 3.4.24.11 GO:0001786 ... P08473 10669592 PDBbind: -logKd/Ki=8.70, IC50=2nM
    BindingDB: IC50=30nM
    433 1doj:A (1.7) BS02 1Z0 3.4.21.5 GO:0004252 ... P00734 11053836 PDBbind: -logKd/Ki=8.96, Ki=1.1nM
    434 1dqn:A (1.75) BS02 IMU 2.4.2.8 GO:0000166 ... Q24973 10841757 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    435 1dqx:A (2.4) BS01 BMP 4.1.1.23 GO:0004590 ... P03962 10681417 MOAD: Ki=9pM
    PDBbind: -logKd/Ki=11.05, Ki=9pM
    BindingDB: Ki=0.0090nM
    436 1dqx:A (2.4) BS02 BMP 4.1.1.23 GO:0004590 ... P03962 10681417 MOAD: Ki=9pM
    PDBbind: -logKd/Ki=11.05, Ki=9pM
    BindingDB: Ki=0.0090nM
    437 1dqx:B (2.4) BS01 BMP 4.1.1.23 GO:0004590 ... P03962 10681417 MOAD: Ki=9pM
    PDBbind: -logKd/Ki=11.05, Ki=9pM
    BindingDB: Ki=0.0090nM
    438 1dqx:B (2.4) BS02 BMP 4.1.1.23 GO:0004590 ... P03962 10681417 MOAD: Ki=9pM
    PDBbind: -logKd/Ki=11.05, Ki=9pM
    BindingDB: Ki=0.0090nM
    439 1drj:A (2.5) BS01 RIP ? GO:0005515 ... P02925 7982928 MOAD: Kd=0.04uM
    PDBbind: -logKd/Ki=7.40, Kd=0.040uM
    440 1drk:A (2.0) BS01 RIP ? GO:0005515 ... P02925 7982928 MOAD: Kd=0.15uM
    PDBbind: -logKd/Ki=6.82, Kd=0.15uM
    441 1drv:A (2.2) BS01 A3D 1.17.1.8 GO:0005737 ... P04036 8873595 MOAD: Kd=0.29uM
    PDBbind: -logKd/Ki=6.54, Kd=0.29uM
    442 1dth:A (2.0) BS03 BAT 3.4.24.42 GO:0004222 ... P15167 8610113 MOAD: ic50=6nM
    PDBbind: -logKd/Ki=8.22, IC50=6nM
    443 1dtq:A (2.8) BS01 FPT 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 10681546 PDBbind: -logKd/Ki=8.22, IC50=6nM
    444 1dtt:A (3.0) BS01 FTC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 10681546 PDBbind: -logKd/Ki=8.30, IC50=5nM
    445 1du0:A (2.0) BS01 dna ? GO:0000981 ... P02836 10889025 PDBbind: Kd=79pM
    446 1du0:A (2.0) BS02 dna ? GO:0000981 ... P02836 10889025 PDBbind: Kd=79pM
    447 1du0:B (2.0) BS01 dna ? GO:0000981 ... P02836 10889025 PDBbind: Kd=79pM
    448 1du0:B (2.0) BS02 dna ? GO:0000981 ... P02836 10889025 PDBbind: Kd=79pM
    449 1dub:A (2.5) BS01 CAA 4.2.1.17
    5.3.3.8    		 GO:0003824 ... P14604 8895557 MOAD: Ki=1.6uM
    PDBbind: -logKd/Ki=5.80, Ki=1.6uM
    450 1dub:A (2.5) BS02 CAA 4.2.1.17
    5.3.3.8    		 GO:0003824 ... P14604 8895557 MOAD: Ki=1.6uM
    PDBbind: -logKd/Ki=5.80, Ki=1.6uM
    451 1dub:B (2.5) BS01 CAA 4.2.1.17
    5.3.3.8    		 GO:0003824 ... P14604 8895557 MOAD: Ki=1.6uM
    PDBbind: -logKd/Ki=5.80, Ki=1.6uM
    452 1dub:B (2.5) BS02 CAA 4.2.1.17
    5.3.3.8    		 GO:0003824 ... P14604 8895557 MOAD: Ki=1.6uM
    PDBbind: -logKd/Ki=5.80, Ki=1.6uM
    453 1duv:G (1.7) BS01 PSQ 2.1.3.3 GO:0004585 ... P04391 10747936 MOAD: Kd=1.6pM
    PDBbind: -logKd/Ki=11.80, Kd=1.6pM
    454 1duv:I (1.7) BS01 PSQ 2.1.3.3 GO:0004585 ... P04391 10747936 MOAD: Kd=1.6pM
    PDBbind: -logKd/Ki=11.80, Kd=1.6pM
    455 1dwc:H (3.0) BS03 MIT 3.4.21.5 GO:0004252 ... P00734 1939071 PDBbind: -logKd/Ki=7.41, Ki=39nM
    456 1dwd:H (3.0) BS03 MID 3.4.21.5 GO:0004252 ... P00734 1939071 PDBbind: -logKd/Ki=8.18, Ki=6.6nM
    BindingDB: Ki=6nM, IC50=690nM, EC50=750nM
    457 1dx6:A (2.3) BS01 GNT 3.1.1.7 GO:0001507 ... P04058 10606746 MOAD: ic50=652nM
    PDBbind: -logKd/Ki=6.19, IC50=652nM
    BindingDB: IC50=1069nM, Ki=1.9e+2nM
    458 1dy4:A (1.9) BS01 SNP 3.2.1.91 GO:0004553 ... P62694 11114249 MOAD: Ki=44uM
    PDBbind: -logKd/Ki=4.36, Ki=44uM
    459 1dzj:A (2.0) BS01 SES ? GO:0005549 ... P81245 10864504 MOAD: ic50=1.3uM
    PDBbind: -logKd/Ki=5.89, IC50=1.3uM
    460 1dzk:A (1.48) BS01 PRZ ? GO:0005549 ... P81245 10864504 MOAD: Kd=0.8uM
    PDBbind: -logKd/Ki=6.10, Kd=0.8uM
    461 1dzm:A (1.93) BS01 BZM ? GO:0005549 ... P81245 10864504 MOAD: ic50=3.9uM
    PDBbind: -logKd/Ki=5.41, IC50=3.9uM
    462 1dzp:B (1.83) BS01 BZQ ? GO:0005549 ... P81245 10864504 MOAD: ic50=3.6uM
    PDBbind: -logKd/Ki=5.44, IC50=3.6uM
    463 1e00:A (1.83) BS01 DHM ? GO:0005549 ... P81245 10864504 MOAD: ic50=0.8uM
    PDBbind: -logKd/Ki=6.10, IC50=0.8uM
    464 1e02:A (2.15) BS01 UNA ? GO:0005549 ... P81245 10864504 MOAD: ic50=0.7uM
    PDBbind: -logKd/Ki=6.15, IC50=0.7uM
    465 1e06:A (2.12) BS01 IPB ? GO:0005549 ... P81245 10864504 MOAD: ic50=2.5uM
    PDBbind: -logKd/Ki=5.60, IC50=2.5uM
    466 1e1v:A (1.95) BS01 CMG 2.7.11.22 GO:0000082 ... P24941 10956187 MOAD: Ki=12uM
    PDBbind: -logKd/Ki=4.92, Ki=12uM
    BindingDB: IC50=17000nM
    467 1e1x:A (1.85) BS01 NW1 2.7.11.22 GO:0000082 ... P24941 10956187 MOAD: Ki=1.3uM
    PDBbind: -logKd/Ki=5.89, Ki=1.3uM
    BindingDB: IC50=2200nM, Ki=1300nM
    468 1e1y:A (2.23) BS01 CPB 2.4.1.1 GO:0000166 ... P00489 10924512 MOAD: ic50=2.5uM
    PDBbind: -logKd/Ki=5.60, IC50=2.5uM
    BindingDB: IC50=1200nM
    469 1e2k:A (1.7) BS01 TMC 2.7.1.21 GO:0004797 ... P0DTH5 10924157 MOAD: Ki=11.4uM
    PDBbind: -logKd/Ki=4.94, Ki=11.4uM
    470 1e2l:A (2.4) BS01 TMC 2.7.1.21 GO:0004797 ... P0DTH5 10924157 MOAD: Ki=51.5uM
    PDBbind: -logKd/Ki=4.29, Ki=51.5uM
    471 1e34:B (1.8) BS02 TPX 3.4.21.36 GO:0004252 ... P00772 11023818 PDBbind: -logKd/Ki=2.88, Ki=1.32mM
    472 1e37:B (1.75) BS02 TPY 3.4.21.36 GO:0004252 ... P00772 11023818 PDBbind: -logKd/Ki=3.70, Ki=0.20mM
    473 1e3g:A (2.4) BS01 R18 ? N/A P10275 10840043 PDBbind: -logKd/Ki=9.00, Kd=0.99nM
    BindingDB: Kd=0.99nM, IC50=0.302000nM, EC50=0.013000nM, Ki=0.400000nM
    474 1e3v:A (2.0) BS01 DXC 5.3.3.1 GO:0004769 ... P07445 11007792 MOAD: Kd=45.74uM
    PDBbind: -logKd/Ki=4.34, Kd=45.74uM
    475 1e4h:A (1.8) BS01 PBR ? GO:0005179 ... P02766 10957627 MOAD: Kd=3.9nM
    PDBbind: -logKd/Ki=8.41, Kd=3.9nM
    476 1e4h:B (1.8) BS01 PBR ? GO:0005179 ... P02766 10957627 MOAD: Kd=3.9nM
    PDBbind: -logKd/Ki=8.41, Kd=3.9nM
    477 1e55:A (2.0) BS01 BGC 3.2.1.182
    3.2.1.21    		 GO:0004553 ... P49235 11106394 PDBbind: -logKd/Ki=4.12, Ki=76uM
    478 1e55:A (2.0) BS02 DHR 3.2.1.182
    3.2.1.21    		 GO:0004553 ... P49235 11106394 MOAD: Ki=76uM
    PDBbind: -logKd/Ki=4.12, Ki=76uM
    479 1e5a:A (1.8) BS01 TBP ? GO:0005179 ... P02766 10957627 MOAD: Kd=23nM
    PDBbind: -logKd/Ki=7.64, Kd=23nM
    480 1e5a:B (1.8) BS01 TBP ? GO:0005179 ... P02766 10957627 MOAD: Kd=23nM
    PDBbind: -logKd/Ki=7.64, Kd=23nM
    481 1e5j:A (1.85) BS01 SGC 3.2.1.4 GO:0000272 ... O85465 11828460 PDBbind: -logKd/Ki=4.00, Ki=100uM
    482 1e5j:A (1.85) BS02 SGC 3.2.1.4 GO:0000272 ... O85465 11828460 PDBbind: -logKd/Ki=4.00, Ki=100uM
    483 1e5j:A (1.85) BS03 GLC 3.2.1.4 GO:0000272 ... O85465 11828460 PDBbind: -logKd/Ki=4.00, Ki=100uM
    484 1e66:A (2.1) BS01 HUX 3.1.1.7 GO:0001507 ... P04058 11863435 MOAD: Ki=0.13nM
    PDBbind: -logKd/Ki=9.89, Ki=0.13nM
    485 1e6q:M (1.35) BS01 NTZ 3.2.1.147 GO:0004553 ... P29736 10978344 MOAD: Ki=0.7mM
    PDBbind: -logKd/Ki=3.15, Ki=0.7mM
    486 1e6s:M (1.35) BS01 GOX 3.2.1.147 GO:0004553 ... P29736 10978344 MOAD: Ki=0.6mM
    PDBbind: -logKd/Ki=3.22, Ki=0.6mM
    487 1e72:M (1.6) BS02 GOX 3.2.1.147 GO:0004553 ... P29736 10978344 MOAD: Ki=0.6mM
    PDBbind: -logKd/Ki=3.22, Ki=0.6mM
    488 1e7j:A () BS01 dna ? N/A N/A N/A PDBbind: Kd=1uM
    489 1e7j:A () BS02 dna ? N/A N/A N/A PDBbind: Kd=1uM
    490 1e8h:A (2.6) BS01 ADP 1.1.3.38 GO:0003824 ... P56216 10984479 PDBbind: -logKd/Ki=5.68, Kd=2.1uM
    491 1e9h:A (2.5) BS01 INR 2.7.11.22 GO:0000082 ... P24941 11377199 MOAD: ic50=35nM
    PDBbind: -logKd/Ki=7.46, IC50=35nM
    BindingDB: IC50=3e+2nM
    492 1eas:A (1.8) BS01 TFK 3.4.21.36 GO:0004252 ... P00772 7932559 PDBbind: -logKd/Ki=7.74, Ki=18nM
    493 1eat:A (2.0) BS01 TFI 3.4.21.36 GO:0004252 ... P00772 7837246 PDBbind: -logKd/Ki=7.82, Ki=15nM
    494 1eb2:A (2.0) BS02 BPO 3.4.21.4 GO:0004175 ... P00760 11881991 MOAD: Ki=16nM
    PDBbind: -logKd/Ki=6.01, Ki=980nM
    BindingDB: Ki=980nM
    495 1ebg:A (2.1) BS02 PAH 4.2.1.11 GO:0000015 ... P00924 8049235 MOAD: Ki=15pM
    PDBbind: -logKd/Ki=10.82, Ki=15pM
    496 1ebw:A (1.81) BS01 BEI 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 MOAD: Ki=0.9nM
    PDBbind: -logKd/Ki=9.05, Ki=0.90nM
    497 1ebw:B (1.81) BS01 BEI 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 PDBbind: -logKd/Ki=9.05, Ki=0.90nM
    498 1eby:A (2.294) BS01 BEB 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 PDBbind: -logKd/Ki=9.70, Ki=0.20nM
    499 1eby:B (2.294) BS01 BEB 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 MOAD: Ki=0.2nM
    PDBbind: -logKd/Ki=9.70, Ki=0.20nM
    500 1ebz:A (2.01) BS01 BEC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 PDBbind: -logKd/Ki=9.40, Ki=0.40nM
    501 1ebz:B (2.01) BS01 BEC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 MOAD: Ki=0.4nM
    PDBbind: -logKd/Ki=9.40, Ki=0.40nM
    502 1ec0:A (1.79) BS01 BED 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 15560801 MOAD: Ki=3.2nM
    PDBbind: -logKd/Ki=8.49, Ki=3.2nM
    503 1ec0:B (1.79) BS01 BED 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 15560801 PDBbind: -logKd/Ki=8.49, Ki=3.2nM
    504 1ec1:A (2.1) BS01 BEE 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 MOAD: Ki=1.2nM
    PDBbind: -logKd/Ki=8.92, Ki=1.20nM
    505 1ec1:B (2.1) BS01 BEE 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 PDBbind: -logKd/Ki=8.92, Ki=1.20nM
    506 1ec2:A (2.0) BS01 BEJ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 PDBbind: -logKd/Ki=10.00, Ki=0.10nM
    507 1ec2:B (2.0) BS01 BEJ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 MOAD: Ki=0.1nM
    PDBbind: -logKd/Ki=10.00, Ki=0.10nM
    508 1ec3:A (1.8) BS01 MS3 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 MOAD: Ki=0.92nM
    PDBbind: -logKd/Ki=9.04, Ki=0.92nM
    509 1ec3:B (1.8) BS01 MS3 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 PDBbind: -logKd/Ki=9.04, Ki=0.92nM
    510 1ec9:A (2.0) BS02 XYH 4.2.1.40 GO:0000287 ... P0AES2 10769114 MOAD: Ki=0.8mM
    PDBbind: -logKd/Ki=3.10, Ki=0.8mM
    511 1ecq:A (2.0) BS01 DXG 4.2.1.40 GO:0000287 ... P0AES2 10769114 MOAD: Ki=1mM
    PDBbind: -logKd/Ki=3.00, Ki=1.0mM
    512 1ecv:A (1.95) BS01 878 3.1.3.48 GO:0004725 ... P18031 10702277 MOAD: Ki=14uM
    PDBbind: -logKd/Ki=4.85, Ki=14uM
    BindingDB: Ki=71449632607551nM
    513 1eed:P (2.0) BS01 0EO 3.4.23.22 GO:0004190 ... P11838 1525155 MOAD: Ki=16.2uM
    PDBbind: -logKd/Ki=4.79, Ki=16.2uM
    514 1eef:G (1.8) BS01 GLA ? GO:0005576 ... P32890 11173465 PDBbind: -logKd/Ki=2.92, IC50=1.2mM
    515 1eef:G (1.8) BS02 I06 ? GO:0005576 ... P32890 11173465 PDBbind: -logKd/Ki=2.92, IC50=1.2mM
    516 1eef:H (1.8) BS01 GLA ? GO:0005576 ... P32890 11173465 PDBbind: -logKd/Ki=2.92, IC50=1.2mM
    517 1eef:H (1.8) BS02 I06 ? GO:0005576 ... P32890 11173465 PDBbind: -logKd/Ki=2.92, IC50=1.2mM
    518 1eei:D (2.0) BS01 GAA ? GO:0005576 ... Q57193 11173465 MOAD: ic50=0.7mM
    PDBbind: -logKd/Ki=3.15, IC50=0.7mM
    519 1eei:E (2.0) BS01 GAA ? GO:0005576 ... Q57193 11173465 MOAD: ic50=0.7mM
    PDBbind: -logKd/Ki=3.15, IC50=0.7mM
    520 1efi:D (1.6) BS01 GAT ? GO:0005576 ... P32890 11173465 MOAD: ic50=12mM
    PDBbind: -logKd/Ki=1.92, IC50=12mM
    521 1efi:E (1.6) BS01 GAT ? GO:0005576 ... P32890 11173465 MOAD: ic50=12mM
    PDBbind: -logKd/Ki=1.92, IC50=12mM
    522 1efy:A (2.2) BS01 BZC 2.4.2.-
    2.4.2.30    		 GO:0003950 ... P26446 11063605 MOAD: Ki=6nM
    PDBbind: -logKd/Ki=8.22, Ki=6nM
    523 1egh:A (2.0) BS01 PGA 4.2.3.3 GO:0005737 ... P0A731 10715115 MOAD: Ki=2uM
    PDBbind: -logKd/Ki=5.70, Ki=2uM
    524 1egh:F (2.0) BS01 PGA 4.2.3.3 GO:0005737 ... P0A731 10715115 MOAD: Ki=2uM
    PDBbind: -logKd/Ki=5.70, Ki=2uM
    525 1eix:A (2.5) BS01 BMQ 4.1.1.23 GO:0004590 ... P08244 10757968 MOAD: Ki=8.8pM
    PDBbind: -logKd/Ki=11.06, Ki=8.8pM
    526 1eix:A (2.5) BS02 BMQ 4.1.1.23 GO:0004590 ... P08244 10757968 MOAD: Ki=8.8pM
    PDBbind: -logKd/Ki=11.06, Ki=8.8pM
    527 1eix:B (2.5) BS01 BMQ 4.1.1.23 GO:0004590 ... P08244 10757968 MOAD: Ki=8.8pM
    PDBbind: -logKd/Ki=11.06, Ki=8.8pM
    528 1eix:B (2.5) BS02 BMQ 4.1.1.23 GO:0004590 ... P08244 10757968 MOAD: Ki=8.8pM
    PDBbind: -logKd/Ki=11.06, Ki=8.8pM
    529 1ejn:A (1.8) BS01 AGB 3.4.21.73 GO:0004252 ... P00749 10805774 MOAD: Ki=2.4uM
    PDBbind: -logKd/Ki=5.62, Ki=2.4uM
    530 1ek1:A (3.1) BS01 CIU 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34914 10747889 PDBbind: -logKd/Ki=7.77, Ki=17nM
    531 1ek2:A (3.0) BS01 CDU 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34914 10747889 PDBbind: -logKd/Ki=8.20, Ki=6.3nM
    BindingDB: IC50=50nM
    532 1ela:A (2.0) BS01 0Z1 3.4.21.36 GO:0004252 ... P00772 7656008 MOAD: Ki=0.44uM
    PDBbind: -logKd/Ki=6.36, Ki=0.44uM
    533 1elb:A (2.1) BS01 0Z4 3.4.21.36 GO:0004252 ... P00772 7656008 MOAD: Ki=70nM
    PDBbind: -logKd/Ki=7.15, Ki=70nM
    534 1elc:A (1.75) BS01 0Z3 3.4.21.36 GO:0004252 ... P00772 7656008 PDBbind: -logKd/Ki=6.66, Ki=0.22uM
    535 1eld:E (2.0) BS01 0Z0 3.4.21.36 GO:0004252 ... P00772 7880814 MOAD: Ki=0.2uM
    PDBbind: -logKd/Ki=6.70, Ki=0.20uM
    536 1ele:E (2.0) BS01 0QN 3.4.21.36 GO:0004252 ... P00772 7880814 MOAD: Ki=0.14uM
    PDBbind: -logKd/Ki=6.85, Ki=0.14uM
    537 1els:A (2.4) BS03 PAH 4.2.1.11 GO:0000015 ... P00924 8193144 MOAD: Ki=15pM
    PDBbind: -logKd/Ki=10.82, Ki=15pM
    538 1em6:A (2.2) BS02 CP4 2.4.1.1 GO:0000166 ... P06737 10980448 MOAD: ic50=6nM
    PDBbind: -logKd/Ki=8.22, IC50=6nM
    BindingDB: IC50=6.0nM
    539 1em6:B (2.2) BS01 CP4 2.4.1.1 GO:0000166 ... P06737 10980448 PDBbind: -logKd/Ki=8.22, IC50=6nM
    BindingDB: IC50=6.0nM
    540 1ent:E (1.9) BS01 0EM 3.4.23.22 GO:0004190 ... P11838 2179568 MOAD: Ki=110nM
    PDBbind: -logKd/Ki=6.96, Ki=110nM
    541 1enu:A (1.95) BS02 APZ 2.4.2.29 GO:0002099 ... P28720 11178905 MOAD: Ki=8.3uM
    PDBbind: -logKd/Ki=5.08, Ki=8.3uM
    542 1eoc:B (2.25) BS02 4NC 1.13.11.3 GO:0003824 ... P20372 10891075 MOAD: Ki=0.9uM
    PDBbind: -logKd/Ki=6.05, Ki=0.9uM
    543 1eou:A (2.1) BS02 SMS 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 11802772 MOAD: ic50=36nM
    PDBbind: -logKd/Ki=7.44, IC50=36nM
    BindingDB: IC50=36nM, Kd=10nM, Ki=12nM
    544 1epo:E (2.0) BS01 2Z3 3.4.23.22 GO:0004190 ... P11838 1304340 MOAD: Ki=11nM
    PDBbind: -logKd/Ki=7.96, Ki=11nM
    545 1epp:E (1.9) BS01 1Z1 3.4.23.22 GO:0004190 ... P11838 8254610 MOAD: Ki=69nM
    PDBbind: -logKd/Ki=7.16, Ki=69nM
    546 1epq:E (1.9) BS01 0QF 3.4.23.22 GO:0004190 ... P11838 8254610 MOAD: Ki=6.5nM
    PDBbind: -logKd/Ki=8.19, Ki=6.5nM
    547 1erb:A (1.9) BS01 ETR ? GO:0005501 ... P18902 8227049 MOAD: Kd=8nM
    PDBbind: -logKd/Ki=8.10, Kd=8nM
    548 1ero:A (2.1) BS01 BJP 3.5.2.6 GO:0005515 ... P62593 10820001 PDBbind: -logKd/Ki=8.23, Ki=5.9nM
    549 1erq:A (1.9) BS01 BJH 3.5.2.6 GO:0005515 ... P62593 10820001 PDBbind: -logKd/Ki=7.89, Ki=13nM
    550 1err:A (2.6) BS01 RAL ? N/A P03372 9338790 PDBbind: -logKd/Ki=8.11, IC50=7.7nM
    BindingDB: IC50=1.8nM, EC50=2.4nM, Ki=0.37nM
    551 1esz:A (2.0) BS01 CPO ? GO:0005515 ... P07822 11805094 MOAD: Kd=0.3uM
    PDBbind: -logKd/Ki=6.52, Kd=0.3uM
    552 1ets:H (2.3) BS01 MID 3.4.21.5 GO:0004252 ... P00735 1518046 MOAD: Ki=6nM
    PDBbind: -logKd/Ki=8.22, Ki=6nM
    BindingDB: Ki=6nM
    553 1ett:H (2.5) BS01 4QQ 3.4.21.5 GO:0004252 ... P00735 1518046 MOAD: Ki=1.3uM
    PDBbind: -logKd/Ki=5.89, Ki=1.3uM
    554 1etz:H (2.6) BS01 GAS ? N/A P01867 10993728 PDBbind: -logKd/Ki=7.24, Kd=58nM
    555 1etz:L (2.6) BS01 GAS ? N/A G0YP42 10993728 PDBbind: -logKd/Ki=7.24, Kd=58nM
    556 1eub:A (-1.00) BS05 HAV 3.4.24.- GO:0004222 ... P45452 10926524 PDBbind: -logKd/Ki=8.72, Ki=1.9nM
    557 1eub:A (-1.00) BS06 3MP 3.4.24.- GO:0004222 ... P45452 10926524 PDBbind: -logKd/Ki=8.72, Ki=1.9nM
    558 1eub:A (-1.00) BS07 MSB 3.4.24.- GO:0004222 ... P45452 10926524 PDBbind: -logKd/Ki=8.72, Ki=1.9nM
    559 1eve:A (2.5) BS01 E20 3.1.1.7 GO:0001507 ... P04058 10368299 MOAD: ic50=5.7nM
    PDBbind: -logKd/Ki=8.24, IC50=5.7nM
    BindingDB: IC50=23nM, Ki=3.3nM
    560 1evw:A (3.1) BS01 dna 3.1.-.- GO:0004519 ... Q94702 10891275 PDBbind: Kd=10pM
    561 1evw:A (3.1) BS02 dna 3.1.-.- GO:0004519 ... Q94702 10891275 PDBbind: Kd=10pM
    562 1evw:B (3.1) BS01 dna 3.1.-.- GO:0004519 ... Q94702 10891275 PDBbind: Kd=10pM
    563 1evw:B (3.1) BS02 dna 3.1.-.- GO:0004519 ... Q94702 10891275 PDBbind: Kd=10pM
    564 1evw:C (3.1) BS01 dna 3.1.-.- GO:0004519 ... Q94702 10891275 PDBbind: Kd=10pM
    565 1evw:C (3.1) BS02 dna 3.1.-.- GO:0004519 ... Q94702 10891275 PDBbind: Kd=10pM
    566 1evw:D (3.1) BS01 dna 3.1.-.- GO:0004519 ... Q94702 10891275 PDBbind: Kd=10pM
    567 1evw:D (3.1) BS02 dna 3.1.-.- GO:0004519 ... Q94702 10891275 PDBbind: Kd=10pM
    568 1ew8:A (2.2) BS06 PAE 3.1.3.1 GO:0000287 ... P00634 10850800 MOAD: Ki=5.5mM
    PDBbind: -logKd/Ki=2.26, Ki=5.5mM
    569 1ew9:A (2.0) BS05 MMQ 3.1.3.1 GO:0000287 ... P00634 10850800 MOAD: Ki=0.6mM
    PDBbind: -logKd/Ki=3.22, Ki=0.6mM
    570 1ew9:B (2.0) BS05 MMQ 3.1.3.1 GO:0000287 ... P00634 10850800 MOAD: Ki=0.6mM
    PDBbind: -logKd/Ki=3.22, Ki=0.6mM
    571 1ewj:A (2.5) BS01 BLM ? GO:0046677 ... P13081 11134052 PDBbind: -logKd/Ki=7.49, Kd=32nM
    572 1ewj:A (2.5) BS02 BLM ? GO:0046677 ... P13081 11134052 PDBbind: -logKd/Ki=7.49, Kd=32nM
    573 1ewj:B (2.5) BS01 BLM ? GO:0046677 ... P13081 11134052 PDBbind: -logKd/Ki=7.49, Kd=32nM
    574 1ewj:B (2.5) BS02 BLM ? GO:0046677 ... P13081 11134052 PDBbind: -logKd/Ki=7.49, Kd=32nM
    575 1ex8:A (1.85) BS01 A4P 2.7.6.3 GO:0000287 ... P26281 11311059 MOAD: Kd=0.47uM
    PDBbind: -logKd/Ki=6.33, Kd=0.47uM
    576 1exd:A (2.7) BS01 rna 6.1.1.18 GO:0000166 ... P00962 10881199 PDBbind: Kd=7.1nM
    577 1exv:A (2.4) BS03 700 2.4.1.1 GO:0000166 ... P06737 10980448 MOAD: ic50=45nM
    PDBbind: -logKd/Ki=7.35, IC50=45nM
    BindingDB: IC50=45nM
    578 1exv:A (2.4) BS04 700 2.4.1.1 GO:0000166 ... P06737 10980448 MOAD: ic50=45nM
    PDBbind: -logKd/Ki=7.35, IC50=45nM
    BindingDB: IC50=45nM
    579 1exv:B (2.4) BS01 700 2.4.1.1 GO:0000166 ... P06737 10980448 MOAD: ic50=45nM
    PDBbind: -logKd/Ki=7.35, IC50=45nM
    BindingDB: IC50=45nM
    580 1exv:B (2.4) BS04 700 2.4.1.1 GO:0000166 ... P06737 10980448 MOAD: ic50=45nM
    PDBbind: -logKd/Ki=7.35, IC50=45nM
    BindingDB: IC50=45nM
    581 1exw:A (2.4) BS01 HDS 3.1.2.22 GO:0002084 ... P45478 10801859 PDBbind: -logKd/Ki=3.90, Ki=125uM
    582 1ez9:A (1.9) BS01 GLC ? GO:0005515 ... P0AEX9 11790091 PDBbind: -logKd/Ki=5.10, Kd=8uM
    583 1ez9:A (1.9) BS02 GLC ? GO:0005515 ... P0AEX9 11790091 PDBbind: -logKd/Ki=5.10, Kd=8uM
    584 1ez9:A (1.9) BS03 GLC ? GO:0005515 ... P0AEX9 11790091 PDBbind: -logKd/Ki=5.10, Kd=8uM
    585 1ezf:A (2.15) BS01 IN0 2.5.1.21 GO:0004310 ... P37268 10896663 PDBbind: -logKd/Ki=7.25, IC50=56nM
    586 1ezq:A (2.2) BS02 RPR 3.4.21.6 GO:0004252 ... P00742 10966741 MOAD: Ki=0.9nM
    PDBbind: -logKd/Ki=9.05, Ki=0.9nM
    BindingDB: Ki=0.9nM
    587 1f0q:A (2.63) BS01 EMO 2.7.11.1 GO:0004672 ... P28523 10882732 PDBbind: -logKd/Ki=6.00, IC50=1uM
    BindingDB: Ki=1850nM
    588 1f0r:A (2.1) BS02 815 3.4.21.6 GO:0004252 ... P00742 10966741 MOAD: Ki=22nM
    PDBbind: -logKd/Ki=7.66, Ki=22nM
    BindingDB: Ki=22nM
    589 1f0s:A (2.1) BS02 PR2 3.4.21.6 GO:0004252 ... P00742 10966741 MOAD: Ki=18nM
    PDBbind: -logKd/Ki=7.74, Ki=18nM
    BindingDB: Ki=18nM
    590 1f0t:A (1.8) BS02 PR1 3.4.21.4 GO:0004252 ... P00760 10966741 MOAD: Ki=1000nM
    PDBbind: -logKd/Ki=6.00, Ki=1000nM
    BindingDB: Ki=1000nM
    591 1f0u:A (1.9) BS02 RPR 3.4.21.4 GO:0004252 ... P00760 10966741 MOAD: Ki=69nM
    PDBbind: -logKd/Ki=7.16, Ki=69nM
    BindingDB: Ki=69nM
    592 1f28:A (1.9) BS02 F89 2.1.1.45 GO:0004799 ... P13100 11358692 MOAD: Ki=16nM
    PDBbind: -logKd/Ki=7.80, Ki=16nM
    593 1f28:B (1.9) BS03 F89 2.1.1.45 GO:0004799 ... P13100 11358692 MOAD: Ki=16nM
    PDBbind: -logKd/Ki=7.80, Ki=16nM
    594 1f2o:A (1.7) BS04 LEU 3.4.11.24 GO:0004177 ... P80561 11484227 MOAD: Ki=12.4mM
    PDBbind: -logKd/Ki=1.91, Ki=12.4mM
    595 1f2p:A (1.8) BS04 PHE 3.4.11.24 GO:0004177 ... P80561 11484227 MOAD: Ki=12.7mM
    PDBbind: -logKd/Ki=1.90, Ki=12.7mM
    596 1f3e:A (1.85) BS02 DPZ 2.4.2.29 GO:0002099 ... P28720 11178905 MOAD: Ki=0.2uM
    PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    597 1f40:A (-1.00) BS01 GPI 5.2.1.8 GO:0000413 ... P62942 10951192 PDBbind: -logKd/Ki=6.00, Kd=1uM
    BindingDB: Ki=7.5nM, IC50=1240nM
    598 1f4e:A (1.9) BS01 TPR 2.1.1.45 GO:0000287 ... P0A884 10944209 MOAD: Ki=1.1mM
    PDBbind: -logKd/Ki=2.96, Ki=1.1mM
    599 1f4e:A (1.9) BS02 TPR 2.1.1.45 GO:0000287 ... P0A884 10944209 MOAD: Ki=1.1mM
    PDBbind: -logKd/Ki=2.96, Ki=1.1mM
    600 1f4f:A (2.0) BS01 TP3 2.1.1.45 GO:0000287 ... P0A884 10944209 MOAD: Ki=24uM
    PDBbind: -logKd/Ki=4.62, Ki=24uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218