Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    2601 1t32:A (1.85) BS01 OHH 3.4.21.20 GO:0002003 ... P08311 15741158 MOAD: Ki=38nM
    PDBbind: -logKd/Ki=7.42, Ki=38nM
    BindingDB: Ki=38nM
    2602 1t3t:A (1.9) BS07 ADP 6.3.5.3 GO:0004642 ... P74881 15301531 PDBbind: -logKd/Ki=4.96, Ki=11uM
    2603 1t46:A (1.6) BS01 STI 2.7.10.1 GO:0004672 ... P10721 15123710 PDBbind: -logKd/Ki=6.43, IC50=0.37uM
    BindingDB: IC50=100nM, Kd=15nM, Ki=14nM, EC50=100nM
    2604 1t48:A (2.2) BS01 BB3 3.1.3.48 GO:0004725 ... P18031 15258570 MOAD: ic50=350uM
    PDBbind: -logKd/Ki=3.46, IC50=350uM
    2605 1t49:A (1.9) BS01 892 3.1.3.48 GO:0004725 ... P18031 15258570 MOAD: ic50=22uM
    PDBbind: -logKd/Ki=4.66, IC50=22uM
    2606 1t4e:A (2.6) BS01 DIZ 2.3.2.27 GO:0005634 ... Q00987 15715460 PDBbind: -logKd/Ki=7.10, Kd=80nM
    BindingDB: IC50=420nM, Kd=80nM
    2607 1t4j:A (2.7) BS01 FRJ 3.1.3.48 GO:0004725 ... P18031 15258570 PDBbind: -logKd/Ki=5.10, IC50=8uM
    BindingDB: IC50=8000nM
    2608 1t4s:A (2.8) BS03 VAL 3.5.3.1 GO:0000050 ... P07824 15248756 PDBbind: -logKd/Ki=2.44, Ki=3.6mM
    2609 1t4v:H (2.0) BS03 14A 3.4.21.5 GO:0004252 ... P00734 15203151 MOAD: Ki=0.021uM
    PDBbind: -logKd/Ki=7.68, Ki=0.021uM
    BindingDB: Ki=21nM
    2610 1t5f:A (2.2) BS03 DHH 3.5.3.1 GO:0000050 ... P07824 15315440 MOAD: Ki=60uM
    PDBbind: -logKd/Ki=4.22, Ki=60uM
    2611 1t69:A (2.91) BS02 SHH 3.5.1.-
    3.5.1.98    		 GO:0000118 ... Q9BY41 15242608 PDBbind: -logKd/Ki=6.32, Ki=0.48uM
    BindingDB: IC50=243nM, Ki=480nM, Kd=1.2e+3nM
    2612 1t7j:A (2.2) BS01 478 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P35963 15771427 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=8.70, Kd=2.0nM
    2613 1t7j:B (2.2) BS01 478 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P35963 15771427 PDBbind: -logKd/Ki=8.70, Kd=2.0nM
    2614 1t8i:A (3.0) BS01 dna 5.6.2.1 GO:0003677 ... P11387 15801827 PDBbind: IC50=0.3uM
    2615 1t8i:A (3.0) BS02 dna 5.6.2.1 GO:0003677 ... P11387 15801827 PDBbind: IC50=0.3uM
    2616 1t8i:A (3.0) BS03 dna 5.6.2.1 GO:0003677 ... P11387 15801827 PDBbind: IC50=0.3uM
    2617 1t9i:A (1.6) BS01 dna 3.1.-.- GO:0004519 ... P05725 15518550 PDBbind: Kd=1.8nM
    2618 1t9i:A (1.6) BS02 dna 3.1.-.- GO:0004519 ... P05725 15518550 PDBbind: Kd=1.8nM
    2619 1t9i:B (1.6) BS01 dna 3.1.-.- GO:0004519 ... P05725 15518550 PDBbind: Kd=1.8nM
    2620 1t9i:B (1.6) BS02 dna 3.1.-.- GO:0004519 ... P05725 15518550 PDBbind: Kd=1.8nM
    2621 1t9j:A (2.0) BS01 dna 3.1.-.- GO:0004519 ... P05725 15518550 PDBbind: Kd=0.6nM
    2622 1t9j:A (2.0) BS02 dna 3.1.-.- GO:0004519 ... P05725 15518550 PDBbind: Kd=0.6nM
    2623 1t9j:B (2.0) BS01 dna 3.1.-.- GO:0004519 ... P05725 15518550 PDBbind: Kd=0.6nM
    2624 1t9j:B (2.0) BS02 dna 3.1.-.- GO:0004519 ... P05725 15518550 PDBbind: Kd=0.6nM
    2625 1ta2:A (2.3) BS02 176 3.4.21.5 GO:0004252 ... P00734 9703466 MOAD: Ki=3nM
    PDBbind: -logKd/Ki=8.52, Ki=3nM
    BindingDB: Ki=3nM
    2626 1ta6:A (1.9) BS02 177 3.4.21.5 GO:0004252 ... P00734 9703466 MOAD: Ki=0.74nM
    PDBbind: -logKd/Ki=9.13, Ki=0.74nM
    BindingDB: Ki=0.74nM
    2627 1tbz:H (2.3) BS03 00Q 3.4.21.5 GO:0004252 ... P00734 8913620 PDBbind: -logKd/Ki=9.80, Ki=0.16nM
    2628 1tc1:A (1.41) BS01 FMB 2.4.2.8 GO:0000166 ... Q4DRC4 9790669 MOAD: ic50>2mM
    PDBbind: -logKd/Ki=2.70, IC50>2mM
    2629 1tcw:A (2.4) BS01 IM1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P05896 8756683 MOAD: Ki=960nM
    PDBbind: -logKd/Ki=6.02, Ki=960nM
    2630 1tcw:B (2.4) BS01 IM1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P05896 8756683 MOAD: Ki=960nM
    PDBbind: -logKd/Ki=6.02, Ki=960nM
    2631 1tcw:B (2.4) BS02 IM1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P05896 8756683 MOAD: Ki=960nM
    PDBbind: -logKd/Ki=6.02, Ki=960nM
    2632 1tcx:A (2.3) BS01 IM1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04587 8756683 MOAD: Ki=112nM
    PDBbind: -logKd/Ki=6.95, Ki=112nM
    2633 1tcx:B (2.3) BS01 IM1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04587 8756683 PDBbind: -logKd/Ki=6.95, Ki=112nM
    2634 1td7:A (2.5) BS02 NFL 3.1.1.4 GO:0004623 ... P60045 16301791 MOAD: Kd=43uM
    PDBbind: -logKd/Ki=4.37, Kd=43uM
    2635 1tdz:A (1.8) BS01 dna 3.2.2.23
    4.2.99.18    		 GO:0003676 ... P42371 15249553 PDBbind: Kd=3nM
    2636 1tdz:A (1.8) BS02 dna 3.2.2.23
    4.2.99.18    		 GO:0003676 ... P42371 15249553 PDBbind: Kd=3nM
    2637 1tfq:A (-1.00) BS02 998 2.3.2.27 N/A P98170 15317454 PDBbind: -logKd/Ki=7.92, Kd=0.012uM
    2638 1tft:A (-1.00) BS02 997 2.3.2.27 N/A P98170 15317454 PDBbind: -logKd/Ki=8.30, Kd=0.005uM
    BindingDB: Kd=5.0nM
    2639 1tfz:A (1.8) BS02 869 1.13.11.27 GO:0003868 ... P93836 15301540 MOAD: ic50=7nM
    PDBbind: -logKd/Ki=8.15, IC50=7nM
    2640 1tg5:A (1.9) BS02 645 1.13.11.27 GO:0003868 ... P93836 15301540 MOAD: ic50=12nM
    PDBbind: -logKd/Ki=7.92, IC50=12nM
    2641 1thl:A (1.7) BS06 0DB 3.4.24.27 GO:0004222 ... P00800 8286362 MOAD: Ki=0.38uM
    PDBbind: -logKd/Ki=6.42, Ki=0.38uM
    2642 1thz:A (1.8) BS01 326 2.1.2.3
    3.5.4.10    		 GO:0003824 ... P31335 15355974 MOAD: Ki=7.1uM
    PDBbind: -logKd/Ki=5.15, Ki=7.1uM
    2643 1thz:A (1.8) BS02 326 2.1.2.3
    3.5.4.10    		 GO:0003824 ... P31335 15355974 MOAD: Ki=7.1uM
    PDBbind: -logKd/Ki=5.15, Ki=7.1uM
    2644 1thz:B (1.8) BS01 326 2.1.2.3
    3.5.4.10    		 GO:0003824 ... P31335 15355974 MOAD: Ki=7.1uM
    PDBbind: -logKd/Ki=5.15, Ki=7.1uM
    2645 1thz:B (1.8) BS02 326 2.1.2.3
    3.5.4.10    		 GO:0003824 ... P31335 15355974 MOAD: Ki=7.1uM
    PDBbind: -logKd/Ki=5.15, Ki=7.1uM
    2646 1tjp:A (1.5) BS01 HPF 4.2.1.20 GO:0000162 ... P00929 16120446 PDBbind: -logKd/Ki=4.42, Kd=38uM
    2647 1tka:A (2.7) BS02 N3T 2.2.1.1 GO:0003824 ... P23254 8144674 PDBbind: -logKd/Ki=6.10, Kd=0.8uM
    2648 1tka:A (2.7) BS03 N3T 2.2.1.1 GO:0003824 ... P23254 8144674 PDBbind: -logKd/Ki=6.10, Kd=0.8uM
    2649 1tka:B (2.7) BS01 N3T 2.2.1.1 GO:0003824 ... P23254 8144674 PDBbind: -logKd/Ki=6.10, Kd=0.8uM
    2650 1tka:B (2.7) BS03 N3T 2.2.1.1 GO:0003824 ... P23254 8144674 PDBbind: -logKd/Ki=6.10, Kd=0.8uM
    2651 1tkb:A (2.3) BS02 N1T 2.2.1.1 GO:0003824 ... P23254 8144674 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    2652 1tkb:A (2.3) BS03 N1T 2.2.1.1 GO:0003824 ... P23254 8144674 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    2653 1tkb:B (2.3) BS01 N1T 2.2.1.1 GO:0003824 ... P23254 8144674 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    2654 1tkb:B (2.3) BS03 N1T 2.2.1.1 GO:0003824 ... P23254 8144674 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    2655 1tkc:A (2.7) BS02 M6T 2.2.1.1 GO:0003824 ... P23254 8144674 PDBbind: -logKd/Ki=4.85, Kd=14uM
    2656 1tkc:A (2.7) BS03 M6T 2.2.1.1 GO:0003824 ... P23254 8144674 PDBbind: -logKd/Ki=4.85, Kd=14uM
    2657 1tkc:B (2.7) BS01 M6T 2.2.1.1 GO:0003824 ... P23254 8144674 PDBbind: -logKd/Ki=4.85, Kd=14uM
    2658 1tkc:B (2.7) BS03 M6T 2.2.1.1 GO:0003824 ... P23254 8144674 PDBbind: -logKd/Ki=4.85, Kd=14uM
    2659 1tkt:A (2.6) BS01 H12 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 15537346 PDBbind: -logKd/Ki=6.15, IC50=0.71uM
    2660 1tkx:A (2.85) BS01 GWB 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 15537347 PDBbind: -logKd/Ki=7.54, IC50=29nM
    2661 1tkz:A (2.81) BS01 H16 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 15537346 PDBbind: -logKd/Ki=6.62, IC50=0.24uM
    2662 1tl1:A (2.9) BS01 H18 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 15537346 PDBbind: -logKd/Ki=6.42, IC50=0.38uM
    2663 1tl3:A (2.8) BS01 H20 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 15537346 PDBbind: -logKd/Ki=6.20, IC50=0.63uM
    2664 1tl7:A (2.8) BS04 ONM 4.6.1.1 GO:0009190 ... P30803 15591060 PDBbind: -logKd/Ki=7.92, Ki=12nM
    2665 1tl7:B (2.8) BS02 ONM 4.6.1.1 GO:0009190 ... P26769 15591060 PDBbind: -logKd/Ki=7.92, Ki=12nM
    2666 1tlo:A (1.9) BS03 E64 3.4.22.52 GO:0004198 ... P97571 15491615 PDBbind: -logKd/Ki=4.00, IC50=100uM
    2667 1tlp:E (2.3) BS01 RDF 3.4.24.27 GO:0004222 ... P00800 3709536 MOAD: Ki=28nM
    PDBbind: -logKd/Ki=7.55, Ki=28nM
    BindingDB: Kd=28nM, IC50=33nM, Ki=28nM
    2668 1tmm:A (1.25) BS04 APC 2.7.6.3 GO:0000287 ... P26281 15952765 MOAD: Kd=0.23uM
    PDBbind: -logKd/Ki=6.64, Kd=0.23uM
    2669 1tmn:E (1.9) BS01 0ZN 3.4.24.27 GO:0004222 ... P00800 6395881 MOAD: Ki=50nM
    PDBbind: -logKd/Ki=7.30, Ki=50nM
    2670 1tng:A (1.8) BS02 AMC 3.4.21.4 GO:0004175 ... P00760 7634078 MOAD: Ki=1.17mM
    PDBbind: -logKd/Ki=2.93, Ki=1.17mM
    2671 1tnh:A (1.8) BS02 FBA 3.4.21.4 GO:0004175 ... P00760 7634078 MOAD: Ki=0.43mM
    PDBbind: -logKd/Ki=3.37, Ki=0.43mM
    2672 1tni:A (1.9) BS02 PBN 3.4.21.4 GO:0004175 ... P00760 7634078 MOAD: Ki=0.1mM
    PDBbind: -logKd/Ki=4.00, Ki=0.10mM
    2673 1tnj:A (1.8) BS02 PEA 3.4.21.4 GO:0004175 ... P00760 7634078 MOAD: Ki=11mM
    PDBbind: -logKd/Ki=1.96, Ki=11.0mM
    2674 1tnk:A (1.8) BS02 PRA 3.4.21.4 GO:0004175 ... P00760 7634078 MOAD: Ki=32.5mM
    PDBbind: -logKd/Ki=1.49, Ki=32.5mM
    2675 1tnl:A (1.9) BS02 TPA 3.4.21.4 GO:0004175 ... P00760 7634078 MOAD: Ki=13.3mM
    PDBbind: -logKd/Ki=1.88, Ki=13.3mM
    2676 1tog:A (2.31) BS01 HCI 2.6.1.1 GO:0003824 ... P00509 15461450 MOAD: Kd=0.6mM
    PDBbind: -logKd/Ki=3.22, Kd=0.6mM
    2677 1tog:B (2.31) BS01 HCI 2.6.1.1 GO:0003824 ... P00509 15461450 MOAD: Kd=0.6mM
    PDBbind: -logKd/Ki=3.22, Kd=0.6mM
    2678 1tog:B (2.31) BS02 HCI 2.6.1.1 GO:0003824 ... P00509 15461450 MOAD: Kd=0.6mM
    PDBbind: -logKd/Ki=3.22, Kd=0.6mM
    2679 1toi:A (1.9) BS01 HCI 2.6.1.1 GO:0003824 ... P00509 15461450 MOAD: Kd=0.09mM
    PDBbind: -logKd/Ki=4.05, Kd=0.090mM
    2680 1toj:A (1.9) BS01 HCI 2.6.1.1 GO:0003824 ... P00509 15461450 MOAD: Kd=0.41mM
    PDBbind: -logKd/Ki=3.39, Kd=0.41mM
    2681 1tom:H (1.8) BS03 MIN 3.4.21.5 GO:0004252 ... P00734 N/A MOAD: Ki=5nM
    PDBbind: -logKd/Ki=8.30, Ki=5nM
    BindingDB: Ki=5nM, IC50=6nM
    2682 1tou:A (2.0) BS01 B1V ? GO:0005324 ... P15090 15357970 MOAD: ic50=1uM
    PDBbind: -logKd/Ki=6.00, IC50=1uM
    2683 1tow:A (2.0) BS01 CRZ ? GO:0005324 ... P15090 15357969 MOAD: ic50=0.57uM
    PDBbind: -logKd/Ki=6.24, IC50=0.57uM
    BindingDB: IC50=570.0nM
    2684 1tpw:A (1.9) BS01 PGH 4.2.3.3
    5.3.1.1    		 GO:0004807 ... P00940 10194358 MOAD: Ki=0.5mM
    PDBbind: -logKd/Ki=3.30, Ki=0.5mM
    2685 1tpw:B (1.9) BS01 PGH 4.2.3.3
    5.3.1.1    		 GO:0004807 ... P00940 10194358 MOAD: Ki=0.5mM
    PDBbind: -logKd/Ki=3.30, Ki=0.5mM
    2686 1tpz:A (2.0) BS01 GDP 3.6.5.- GO:0003924 ... Q9QZ85 15350217 MOAD: Kd=0.64uM
    PDBbind: -logKd/Ki=6.19, Kd=0.64uM
    2687 1tq4:A (1.95) BS01 GDP 3.6.5.- GO:0003924 ... Q9QZ85 15350217 MOAD: Kd=0.64uM
    PDBbind: -logKd/Ki=6.19, Kd=0.64uM
    2688 1tqe:P (2.7) BS01 dna ? GO:0000977 ... Q02080 15567413 PDBbind: Kd=0.72uM
    2689 1tqe:P (2.7) BS02 dna ? GO:0000977 ... Q02080 15567413 PDBbind: Kd=0.72uM
    2690 1tqe:Q (2.7) BS01 dna ? GO:0000977 ... Q02080 15567413 PDBbind: Kd=0.72uM
    2691 1tqe:Q (2.7) BS02 dna ? GO:0000977 ... Q02080 15567413 PDBbind: Kd=0.72uM
    2692 1tqe:R (2.7) BS01 dna ? GO:0000977 ... Q02080 15567413 PDBbind: Kd=0.72uM
    2693 1tqe:R (2.7) BS02 dna ? GO:0000977 ... Q02080 15567413 PDBbind: Kd=0.72uM
    2694 1tqe:S (2.7) BS01 dna ? GO:0000977 ... Q02080 15567413 PDBbind: Kd=0.72uM
    2695 1tqe:S (2.7) BS02 dna ? GO:0000977 ... Q02080 15567413 PDBbind: Kd=0.72uM
    2696 1tqf:A (1.8) BS01 32P 3.4.23.46 GO:0004190 ... P56817 15566281 MOAD: ic50=1.4uM
    PDBbind: -logKd/Ki=5.85, IC50=1.4uM
    BindingDB: IC50=1400nM
    2697 1tr7:B (2.1) BS01 DEG ? GO:0007155 ... P08191 15659162 MOAD: Kd=0.15uM
    PDBbind: -logKd/Ki=6.82, Kd=0.15uM
    2698 1trd:B (2.5) BS01 PGH 5.3.1.1 GO:0004807 ... P04789 8356028 MOAD: Ki=4uM
    PDBbind: -logKd/Ki=5.40, Ki=4uM
    2699 1tsi:A (2.84) BS01 4PB 5.3.1.1 GO:0004807 ... P04789 1304889 PDBbind: -logKd/Ki=3.48, Ki=0.33mM
    2700 1tsl:A (2.5) BS01 A15 2.1.1.45 GO:0004799 ... P00469 9931028 MOAD: Ki=0.7uM
    PDBbind: -logKd/Ki=6.15, Ki=0.7uM
    BindingDB: Ki=700nM
    2701 1tsm:A (3.0) BS01 MR2 2.1.1.45 GO:0004799 ... P00469 9931028 PDBbind: -logKd/Ki=6.00, Ki=1.0uM
    2702 1tsv:A (2.9) BS01 UMP 2.1.1.45 GO:0004799 ... P00469 9053905 PDBbind: -logKd/Ki=4.80, Kd=16.0uM
    2703 1tsy:A (2.2) BS01 UMP 2.1.1.45 GO:0004799 ... P00469 9053905 MOAD: Kd=11uM
    PDBbind: -logKd/Ki=4.96, Kd=11.0uM
    2704 1tt1:A (1.93) BS01 KAI ? GO:0015276 ... P42260 15721240 MOAD: Ki=64.6nM
    PDBbind: -logKd/Ki=8.15, IC50=0.007uM
    BindingDB: Ki=12.7nM, Kd=39nM, EC50=1800nM
    2705 1ttm:A (1.95) BS02 667 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 15453828 MOAD: Kd=45nM
    PDBbind: -logKd/Ki=7.35, Kd=45nM
    BindingDB: IC50=25nM, Ki=21nM, Kd=45nM
    2706 1ttv:A (-1.00) BS01 IMY 2.3.2.27 GO:0005634 ... P56273 15557803 PDBbind: -logKd/Ki=6.80, IC50=160nM
    2707 1tu6:A (1.75) BS01 FSP 3.4.22.38 GO:0006508 ... P43235 15341947 PDBbind: -logKd/Ki=9.08, IC50=0.83nM
    BindingDB: IC50=0.832nM
    2708 1tu6:B (1.75) BS01 FSP 3.4.22.38 GO:0006508 ... P43235 15341947 PDBbind: -logKd/Ki=9.08, IC50=0.83nM
    BindingDB: IC50=0.832nM
    2709 1tu6:B (1.75) BS02 FSP 3.4.22.38 GO:0006508 ... P43235 15341947 PDBbind: -logKd/Ki=9.08, IC50=0.83nM
    BindingDB: IC50=0.832nM
    2710 1tuf:A (2.4) BS01 AZ1 4.1.1.20 GO:0003824 ... Q58497 12429091 MOAD: Ki=89uM
    PDBbind: -logKd/Ki=4.05, Ki=89uM
    2711 1tuf:B (2.4) BS01 AZ1 4.1.1.20 GO:0003824 ... Q58497 12429091 MOAD: Ki=89uM
    PDBbind: -logKd/Ki=4.05, Ki=89uM
    2712 1tv6:A (2.8) BS01 CP9 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 15249669 PDBbind: -logKd/Ki=5.40, IC50=4uM
    2713 1tve:A (3.0) BS01 178 1.1.1.3 GO:0004412 ... P31116 15210149 PDBbind: -logKd/Ki=5.68, IC50=2.1uM
    2714 1tvo:A (2.5) BS01 FRZ 2.7.11.24 GO:0000165 ... P28482 16139248 MOAD: Ki=0.14uM
    PDBbind: -logKd/Ki=6.85, Ki=0.14uM
    BindingDB: Ki=310nM, IC50=1200nM, Kd=850nM
    2715 1tvr:A (3.0) BS01 TB9 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 9000632 PDBbind: -logKd/Ki=7.48, IC50=33nM
    2716 1tw8:A (2.8) BS01 dna 3.1.21.4 GO:0003677 ... P17743 15491133 PDBbind: Kd=1.14nM
    2717 1tw8:A (2.8) BS02 dna 3.1.21.4 GO:0003677 ... P17743 15491133 PDBbind: Kd=1.14nM
    2718 1tw8:B (2.8) BS01 dna 3.1.21.4 GO:0003677 ... P17743 15491133 PDBbind: Kd=1.14nM
    2719 1tw8:B (2.8) BS02 dna 3.1.21.4 GO:0003677 ... P17743 15491133 PDBbind: Kd=1.14nM
    2720 1tw8:C (2.8) BS01 dna 3.1.21.4 GO:0003677 ... P17743 15491133 PDBbind: Kd=1.14nM
    2721 1tw8:C (2.8) BS02 dna 3.1.21.4 GO:0003677 ... P17743 15491133 PDBbind: Kd=1.14nM
    2722 1tw8:D (2.8) BS01 dna 3.1.21.4 GO:0003677 ... P17743 15491133 PDBbind: Kd=1.14nM
    2723 1tw8:D (2.8) BS02 dna 3.1.21.4 GO:0003677 ... P17743 15491133 PDBbind: Kd=1.14nM
    2724 1tx7:A (1.75) BS02 4CM 3.4.21.4 GO:0004175 ... P00760 11738605 MOAD: Ki=25uM
    PDBbind: -logKd/Ki=4.60, Ki=25uM
    2725 1txr:A (2.0) BS03 BES 3.4.11.10 GO:0006508 ... Q01693 15274616 MOAD: Ki=18nM
    PDBbind: -logKd/Ki=7.74, Ki=18nM
    BindingDB: IC50=1.6nM, Ki=1.6nM
    2726 1tyn:A (2.0) BS01 CTA 3.4.21.4 GO:0004175 ... P00760 N/A PDBbind: -logKd/Ki=9.70, Ki=0.2nM
    2727 1tys:A (1.8) BS01 TMP 2.1.1.45 GO:0000287 ... P0A884 8312270 PDBbind: -logKd/Ki=5.49, Kd=3.27uM
    2728 1u0b:B (2.3) BS01 rna 6.1.1.16 GO:0000166 ... P21888 15489861 PDBbind: Kd=0.27uM
    2729 1u0c:A (2.5) BS01 dna 3.1.-.- GO:0004519 ... P05725 15313605 PDBbind: Kd=25nM
    2730 1u0c:A (2.5) BS02 dna 3.1.-.- GO:0004519 ... P05725 15313605 PDBbind: Kd=25nM
    2731 1u0c:B (2.5) BS01 dna 3.1.-.- GO:0004519 ... P05725 15313605 PDBbind: Kd=25nM
    2732 1u0c:B (2.5) BS02 dna 3.1.-.- GO:0004519 ... P05725 15313605 PDBbind: Kd=25nM
    2733 1u0d:A (2.9) BS01 dna 3.1.-.- GO:0004519 ... P05725 15313605 PDBbind: Kd=2.0nM
    2734 1u0d:A (2.9) BS02 dna 3.1.-.- GO:0004519 ... P05725 15313605 PDBbind: Kd=2.0nM
    2735 1u0d:B (2.9) BS01 dna 3.1.-.- GO:0004519 ... P05725 15313605 PDBbind: Kd=2.0nM
    2736 1u0d:B (2.9) BS02 dna 3.1.-.- GO:0004519 ... P05725 15313605 PDBbind: Kd=2.0nM
    2737 1u0g:A (1.7) BS01 E4P 5.3.1.9 GO:0001701 ... P06745 15342241 PDBbind: -logKd/Ki=6.15, Ki=0.7uM
    2738 1u0g:B (1.7) BS01 E4P 5.3.1.9 GO:0001701 ... P06745 15342241 PDBbind: -logKd/Ki=6.15, Ki=0.7uM
    2739 1u0h:A (2.9) BS04 ONM 4.6.1.1 GO:0009190 ... P30803 15591060 PDBbind: -logKd/Ki=6.96, Ki=110nM
    2740 1u0h:B (2.9) BS01 ONM 4.6.1.1 GO:0009190 ... P26769 15591060 PDBbind: -logKd/Ki=6.96, Ki=110nM
    2741 1u1b:A (2.0) BS01 PAX 4.6.1.18 GO:0003676 ... P61823 15969595 MOAD: Kd=16nM
    PDBbind: -logKd/Ki=7.80, Kd=16nM
    2742 1u1k:A (2.0) BS01 dna ? GO:0003676 ... P09651 15342234 PDBbind: Kd=319nM
    2743 1u1l:A (2.0) BS01 dna ? GO:0003676 ... P09651 15342234 PDBbind: Kd=107nM
    2744 1u1m:A (2.0) BS01 dna ? GO:0003676 ... P09651 15342234 PDBbind: Kd=296nM
    2745 1u1n:A (2.1) BS01 dna ? GO:0003676 ... P09651 15342234 PDBbind: Kd=316nM
    2746 1u1o:A (2.0) BS01 dna ? GO:0003676 ... P09651 15342234 PDBbind: Kd=59nM
    2747 1u1p:A (1.9) BS01 dna ? GO:0003676 ... P09651 15342234 PDBbind: Kd=209nM
    2748 1u1q:A (1.8) BS01 dna ? GO:0003676 ... P09651 15342234 PDBbind: Kd=76nM
    2749 1u1r:A (1.8) BS01 dna ? GO:0003676 ... P09651 15342234 PDBbind: Kd=229nM
    2750 1u1w:A (1.35) BS01 3HA 5.3.3.17 GO:0002047 ... Q51792 15545603 MOAD: Kd=1.4uM
    PDBbind: -logKd/Ki=5.85, Kd=1.4uM
    2751 1u2r:A (2.6) BS03 GDP 3.6.5.- GO:0003746 ... P32324 15316019 PDBbind: -logKd/Ki=5.41, Kd=3.9uM
    2752 1u2y:A (1.95) BS02 GOX 3.2.1.1 GO:0003824 ... P04746 15304511 MOAD: Ki=18mM
    PDBbind: -logKd/Ki=1.74, Ki=18mM
    2753 1u32:A (2.0) BS03 OKA 3.1.3.16 GO:0000070 ... P36873 15280359 MOAD: ic50=97nM
    PDBbind: -logKd/Ki=7.01, IC50=97nM
    BindingDB: IC50=>5000nM
    2754 1u33:A (1.95) BS01 LM2 3.2.1.1 GO:0003824 ... P04746 15304511 MOAD: Ki=25uM
    PDBbind: -logKd/Ki=4.60, Ki=25uM
    2755 1u3q:A (2.4) BS01 272 ? GO:0003677 ... Q92731 15456246 MOAD: ic50=3.5nM
    PDBbind: -logKd/Ki=8.46, IC50=3.5nM
    BindingDB: IC50=3.5nM
    2756 1u3r:A (2.21) BS02 338 ? GO:0003677 ... Q92731 15456246 MOAD: ic50=5nM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    BindingDB: IC50=5nM
    2757 1u3s:A (2.5) BS02 797 ? GO:0003677 ... Q92731 15456246 MOAD: ic50=1.4nM
    PDBbind: -logKd/Ki=8.85, IC50=1.4nM
    BindingDB: IC50=1.4nM
    2758 1u59:A (2.3) BS01 STU 2.7.10.2 GO:0004672 ... P43403 15292186 MOAD: ic50=55.8nM
    PDBbind: -logKd/Ki=7.25, IC50=55.8nM
    2759 1u63:A (3.4) BS01 rna ? GO:0000049 ... P54050 15659579 PDBbind: Kd=0.52nM
    2760 1u63:A (3.4) BS02 rna ? GO:0000049 ... P54050 15659579 PDBbind: Kd=0.52nM
    2761 1u63:C (3.4) BS01 rna ? GO:0000049 ... P54050 15659579 PDBbind: Kd=0.52nM
    2762 1u63:C (3.4) BS02 rna ? GO:0000049 ... P54050 15659579 PDBbind: Kd=0.52nM
    2763 1u65:A (2.61) BS02 CP0 3.1.1.7 GO:0001507 ... P04058 15772291 PDBbind: -logKd/Ki=7.58, Ki=26.4nM
    BindingDB: Ki=26nM
    2764 1u6p:A (-1.00) BS01 rna ? GO:0003676 ... P03332 15457265 PDBbind: Kd=75nM
    2765 1u6q:A (2.02) BS01 745 3.4.21.73 GO:0004252 ... P00749 15582418 PDBbind: -logKd/Ki=5.88, Ki=1.31uM
    BindingDB: Ki=1259nM
    2766 1u71:A (2.2) BS01 MXA 1.5.1.3 GO:0000900 ... P00374 15681865 PDBbind: -logKd/Ki=7.48, Ki=33nM
    BindingDB: IC50=0.61nM, Ki=0.025nM
    2767 1u9e:A (2.4) BS02 397 ? GO:0003677 ... Q92731 15548008 MOAD: ic50=5.7nM
    PDBbind: -logKd/Ki=8.24, IC50=5.7nM
    BindingDB: IC50=6nM
    2768 1u9q:X (2.3) BS01 186 3.4.22.51 GO:0006508 ... P25779 15727867 MOAD: Ki=1102.9nM
    PDBbind: -logKd/Ki=8.33, IC50=4.7nM
    2769 1u9v:A (2.2) BS01 IHE 3.4.22.38 GO:0006508 ... P43235 15537340 PDBbind: -logKd/Ki=8.22, IC50=6nM
    BindingDB: IC50=6nM
    2770 1u9w:A (2.3) BS01 IHI 3.4.22.38 GO:0006508 ... P43235 15537340 PDBbind: -logKd/Ki=8.46, IC50=3.5nM
    BindingDB: IC50=3.5nM
    2771 1u9x:A (2.1) BS01 IHJ 3.4.22.38 GO:0006508 ... P43235 15537340 PDBbind: -logKd/Ki=8.15, IC50=7nM
    BindingDB: IC50=7nM
    2772 1ua4:A (1.9) BS03 AMP 2.7.1.-
    2.7.1.147    		 GO:0000287 ... Q9V2Z6 12909015 MOAD: Ki~0.06mM
    PDBbind: -logKd/Ki=4.22, Ki=0.06mM
    2773 1ucn:A (2.0) BS03 ADP 2.7.4.6 GO:0000287 ... P15531 12972261 MOAD: Kd=6uM
    PDBbind: -logKd/Ki=5.22, Kd=6.0uM
    2774 1ucn:B (2.0) BS02 ADP 2.7.4.6 GO:0000287 ... P15531 12972261 MOAD: Kd=6uM
    PDBbind: -logKd/Ki=5.22, Kd=6.0uM
    2775 1udt:A (2.3) BS02 VIA 3.1.4.35 GO:0004114 ... O76074 12955149 MOAD: Kd~0.5nM
    PDBbind: -logKd/Ki=9.30, Kd=0.5nM
    BindingDB: IC50=2.2nM, Ki=1.9nM, EC50=8.7nM
    2776 1udu:A (2.83) BS02 CIA 3.1.4.35 GO:0004114 ... O76074 12955149 PDBbind: -logKd/Ki=9.05, Kd=0.9nM
    BindingDB: IC50=4nM, Ki=10nM
    2777 1ugp:A (1.63) BS02 BUA 4.2.1.84 GO:0003824 ... Q7SID2 14717710 PDBbind: -logKd/Ki=2.89, Ki=1.3mM
    2778 1ugx:A (1.6) BS02 MGC ? GO:0005575 ... P18670 12946359 PDBbind: -logKd/Ki=5.91, Kd=1.24uM
    2779 1uh1:C (2.8) BS03 AMG ? GO:0005575 ... P18670 12946359 PDBbind: -logKd/Ki=5.48, Kd=3.3uM
    2780 1uho:A (2.5) BS02 VDN 3.1.4.35 GO:0004114 ... O76074 12955149 MOAD: Kd~0.6nM
    PDBbind: -logKd/Ki=9.22, Kd=0.6nM
    BindingDB: IC50=0.890000nM, Ki=1nM
    2781 1ui0:A (1.5) BS02 URA 3.2.2.27 GO:0004844 ... Q5SKC5 14556741 MOAD: Ki=88nM
    PDBbind: -logKd/Ki=7.06, Ki=88nM
    2782 1ui0:A (1.5) BS03 URA 3.2.2.27 GO:0004844 ... Q5SKC5 14556741 MOAD: Ki=88nM
    PDBbind: -logKd/Ki=7.06, Ki=88nM
    2783 1uj5:A (2.0) BS01 5RP 5.3.1.6 GO:0004751 ... Q72J47 13679361 MOAD: Ki=0.89mM
    PDBbind: -logKd/Ki=3.05, Ki=0.89mM
    2784 1uj6:A (1.74) BS01 A5P 5.3.1.6 GO:0004751 ... Q72J47 13679361 MOAD: Ki=0.89mM
    PDBbind: -logKd/Ki=3.05, Ki=0.89mM
    2785 1uk0:A (3.0) BS01 FRM 2.4.2.-
    2.4.2.30    		 GO:0003950 ... P09874 14706823 PDBbind: -logKd/Ki=8.10, IC50=8nM
    BindingDB: IC50=16nM
    2786 1uk1:A (3.0) BS01 FRQ 2.4.2.-
    2.4.2.30    		 GO:0003950 ... P09874 15293985 PDBbind: -logKd/Ki=7.22, IC50=60nM
    BindingDB: IC50=60nM
    2787 1ukt:A (2.2) BS01 GLC 2.4.1.19 GO:0003824 ... P05618 14769878 PDBbind: -logKd/Ki=2.25, IC50>5600uM
    2788 1uml:A (2.5) BS02 FR4 3.5.4.4 GO:0004000 ... P56658 15239652 MOAD: Ki=30nM
    PDBbind: -logKd/Ki=7.52, Ki=30nM
    2789 1ung:A (2.3) BS01 ALH 2.7.11.1 GO:0000226 ... Q00535 15689152 MOAD: ic50=0.18uM
    PDBbind: -logKd/Ki=6.80, IC50=0.16uM
    BindingDB: IC50=200nM
    2790 1unh:A (2.35) BS01 IXM 2.7.11.1 GO:0000226 ... Q00535 15689152 MOAD: ic50=0.1uM
    PDBbind: -logKd/Ki=7.00, IC50=0.10uM
    2791 1unl:A (2.2) BS01 RRC 2.7.11.1 GO:0000226 ... Q00535 15689152 PDBbind: -logKd/Ki=6.70, IC50=0.20uM
    BindingDB: IC50=160nM, Kd=1900nM
    2792 1uod:A (1.9) BS01 G3H 2.7.1.121 GO:0004371 ... P76015 15476397 PDBbind: -logKd/Ki=3.11, Kd=0.78mM
    2793 1uom:A (2.28) BS01 PTI ? N/A P03372 12825935 MOAD: ic50=19nM
    PDBbind: -logKd/Ki=7.72, IC50=19nM
    BindingDB: IC50=19nM, EC50=16.5nM
    2794 1uou:A (2.11) BS01 CMU 2.4.2.4 GO:0000002 ... P19971 14725767 MOAD: Ki=20nM
    PDBbind: -logKd/Ki=7.70, Ki=20nM
    BindingDB: IC50=35nM, Ki=20nM
    2795 1upf:A (2.3) BS01 URF 2.4.2.9 GO:0004845 ... Q26998 9628859 MOAD: Ki=25uM
    PDBbind: -logKd/Ki=4.60, Ki=25uM
    2796 1upf:D (2.3) BS01 URF 2.4.2.9 GO:0004845 ... Q26998 9628859 MOAD: Ki=25uM
    PDBbind: -logKd/Ki=4.60, Ki=25uM
    2797 1ur9:A (1.8) BS01 GDL 3.2.1.14 GO:0004553 ... Q54276 14597613 PDBbind: -logKd/Ki=5.77, Ki=1.7uM
    2798 1ur9:A (1.8) BS02 PHJ 3.2.1.14 GO:0004553 ... Q54276 14597613 PDBbind: -logKd/Ki=5.77, Ki=1.7uM
    2799 1urw:A (1.6) BS01 I1P 2.7.11.22 GO:0000082 ... P24941 15081018 MOAD: ic50<0.003uM
    PDBbind: -logKd/Ki=8.52, IC50<0.003uM
    BindingDB: IC50=<3nM
    2800 1usn:A (1.8) BS06 IN9 3.4.24.17 GO:0004222 ... P08254 9792098 MOAD: Ki=0.018uM
    PDBbind: -logKd/Ki=7.74, Ki=0.018uM
    BindingDB: Ki=18nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218