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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    24201 6p85:A (1.9) BS01 O4V 2.3.1.191 GO:0005515 ... P21645 31402665 PDBbind: -logKd/Ki=4.99, Kd=10.3uM
    24202 6p85:C (1.9) BS01 O4V 2.3.1.191 GO:0005515 ... P21645 31402665 PDBbind: -logKd/Ki=4.99, Kd=10.3uM
    24203 6p86:A (1.8) BS01 O4S 2.3.1.191 GO:0005515 ... P21645 31402665 PDBbind: -logKd/Ki=4.70, Kd=20uM
    24204 6p86:C (1.8) BS01 O4S 2.3.1.191 GO:0005515 ... P21645 31402665 PDBbind: -logKd/Ki=4.70, Kd=20uM
    24205 6p87:A (1.9) BS01 O4P 2.3.1.191 GO:0005515 ... P21645 31402665 PDBbind: -logKd/Ki=4.60, Kd=25.4uM
    24206 6p87:C (1.9) BS01 O4P 2.3.1.191 GO:0005515 ... P21645 31402665 PDBbind: -logKd/Ki=4.60, Kd=25.4uM
    24207 6p88:A (1.7) BS01 O4G 2.3.1.191 GO:0005515 ... P21645 31402665 PDBbind: -logKd/Ki=4.52, Kd=30.2uM
    24208 6p88:C (1.7) BS01 O4G 2.3.1.191 GO:0005515 ... P21645 31402665 PDBbind: -logKd/Ki=4.52, Kd=30.2uM
    24209 6p89:A (1.4) BS01 O4A 2.3.1.191 GO:0005515 ... P21645 31402665 PDBbind: -logKd/Ki=5.01, Kd=9.77uM
    24210 6p89:C (1.4) BS01 O4A 2.3.1.191 GO:0005515 ... P21645 31402665 PDBbind: -logKd/Ki=5.01, Kd=9.77uM
    24211 6p8a:A (1.8) BS01 O4D 2.3.1.191 GO:0005515 ... P21645 31402665 PDBbind: -logKd/Ki=3.59, Kd=255uM
    24212 6p8a:C (1.8) BS01 O4D 2.3.1.191 GO:0005515 ... P21645 31402665 PDBbind: -logKd/Ki=3.59, Kd=255uM
    24213 6p8x:A (2.11) BS02 O5V 3.6.5.2 GO:0003924 ... P01116 31531201 PDBbind: -logKd/Ki=5.56, IC50=2.78uM
    24214 6p8y:A (2.31) BS02 O5Y 3.6.5.2 GO:0003924 ... P01116 31531201 PDBbind: -logKd/Ki=6.20, IC50=0.638uM
    24215 6p8z:A (1.65) BS02 O5S 3.6.5.2 GO:0003924 ... P01116 31531201 PDBbind: -logKd/Ki=4.70, Kd=20uM
    24216 6p8z:A (1.65) BS03 O5S 3.6.5.2 GO:0003924 ... P01116 31531201 PDBbind: -logKd/Ki=4.70, Kd=20uM
    24217 6p9e:A (2.0) BS01 O6D ? GO:0002437 ... Q9NZH8 31235749 MOAD: Kd=67.6nM
    PDBbind: -logKd/Ki=7.17, Kd=67.6nM
    24218 6pdj:A (1.81) BS01 ODJ 2.7.10.2 GO:0004672 ... P06239 31620238 PDBbind: -logKd/Ki=7.38, IC50=42nM
    BindingDB: IC50=42nM
    24219 6peb:A (2.46) BS01 OE4 2.4.2.12 GO:0005125 ... P43490 31749905 MOAD: ic50=2.7nM
    PDBbind: -logKd/Ki=8.57, IC50=2.7nM
    BindingDB: IC50=2.7nM
    24220 6peb:B (2.46) BS01 OE4 2.4.2.12 GO:0005125 ... P43490 31749905 MOAD: ic50=2.7nM
    PDBbind: -logKd/Ki=8.57, IC50=2.7nM
    BindingDB: IC50=2.7nM
    24221 6peb:B (2.46) BS02 OE4 2.4.2.12 GO:0005125 ... P43490 31749905 MOAD: ic50=2.7nM
    PDBbind: -logKd/Ki=8.57, IC50=2.7nM
    BindingDB: IC50=2.7nM
    24222 6pf3:A (2.391) BS02 OE7 2.1.1.45 GO:0000900 ... P04818 31536894 PDBbind: -logKd/Ki=4.55, IC50=28uM
    24223 6pf3:C (2.391) BS02 OE7 2.1.1.45 GO:0000900 ... P04818 31536894 PDBbind: -logKd/Ki=4.55, IC50=28uM
    24224 6pf4:B (2.854) BS02 OF7 2.1.1.45 GO:0000900 ... P04818 31536894 PDBbind: -logKd/Ki=4.80, IC50=16uM
    24225 6pf4:D (2.854) BS03 OF7 2.1.1.45 GO:0000900 ... P04818 31536894 PDBbind: -logKd/Ki=4.80, IC50=16uM
    24226 6pf5:A (2.39) BS02 OED 2.1.1.45 GO:0000900 ... P04818 31536894 PDBbind: -logKd/Ki=4.96, IC50=11uM
    24227 6pf6:B (2.502) BS02 OEJ 2.1.1.45 GO:0000900 ... P04818 31536894 PDBbind: -logKd/Ki=4.74, IC50=18uM
    24228 6pfj:A (2.08) BS01 C2E ? GO:0000166 ... A0A3N1Q704 31810759 PDBbind: -logKd/Ki=6.41, Kd=0.39uM
    24229 6pfj:T (2.08) BS01 C2E ? N/A F2RFR7 31810759 MOAD: Kd=0.39uM
    PDBbind: -logKd/Ki=6.41, Kd=0.39uM
    24230 6pfj:T (2.08) BS02 C2E ? N/A F2RFR7 31810759 MOAD: Kd=0.39uM
    PDBbind: -logKd/Ki=6.41, Kd=0.39uM
    24231 6pg3:A (2.04) BS01 OHJ ? GO:0000122 ... P61964 31768400 MOAD: Kd=480uM
    PDBbind: -logKd/Ki=3.32, Kd=480uM
    24232 6pg4:A (1.6) BS01 OHG ? GO:0000122 ... P61964 31768400 MOAD: Kd=260uM
    PDBbind: -logKd/Ki=3.59, Kd=260uM
    24233 6pg5:A (1.99) BS01 OHV ? GO:0000122 ... P61964 31768400 MOAD: Kd=11uM
    PDBbind: -logKd/Ki=4.96, Kd=11uM
    24234 6pg6:A (1.68) BS01 OH7 ? GO:0000122 ... P61964 31768400 MOAD: Kd=200uM
    PDBbind: -logKd/Ki=3.70, Kd=200uM
    24235 6pg7:A (2.45) BS01 OH4 ? GO:0000122 ... P61964 31768400 MOAD: Kd=22uM
    PDBbind: -logKd/Ki=4.66, Kd=22uM
    24236 6pg8:A (1.67) BS01 OGY ? GO:0000122 ... P61964 31768400 MOAD: Kd=140uM
    PDBbind: -logKd/Ki=3.85, Kd=140uM
    24237 6pg9:A (1.75) BS01 OH1 ? GO:0000122 ... P61964 31768400 MOAD: Kd=12uM
    PDBbind: -logKd/Ki=4.92, Kd=12uM
    24238 6pga:A (2.45) BS01 OGM ? GO:0000122 ... P61964 31768400 MOAD: Kd=28.9uM
    PDBbind: -logKd/Ki=4.54, Kd=28.9uM
    24239 6pgb:A (1.73) BS01 OJG ? GO:0000122 ... P61964 31768400 MOAD: Kd=25uM
    PDBbind: -logKd/Ki=4.60, Kd=25uM
    24240 6pgc:A (1.81) BS01 OJJ ? GO:0000122 ... P61964 31768400 MOAD: Kd=4.5uM
    PDBbind: -logKd/Ki=5.35, Kd=4.5uM
    24241 6pge:A (1.76) BS01 OJM ? GO:0000122 ... P61964 31768400 MOAD: Kd=240uM
    PDBbind: -logKd/Ki=3.62, Kd=240uM
    24242 6pgo:A (1.6) BS02 OJ1 3.6.5.2 GO:0003924 ... P01116 31820981 PDBbind: -logKd/Ki=4.70, IC50=20.1uM
    24243 6pgp:A (1.5) BS02 OHY 3.6.5.2 GO:0003924 ... P01116 31820981 PDBbind: -logKd/Ki=7.00, IC50=0.101uM
    24244 6pgx:A (1.36) BS02 OJ4 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 31401537 MOAD: Ki=0.62nM
    PDBbind: -logKd/Ki=9.21, Ki=0.62nM
    BindingDB: Ki=0.620000nM
    24245 6pgx:A (1.36) BS03 OJ4 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 31401537 MOAD: Ki=0.62nM
    PDBbind: -logKd/Ki=9.21, Ki=0.62nM
    BindingDB: Ki=0.620000nM
    24246 6pgx:A (1.36) BS04 OJ4 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 31401537 MOAD: Ki=0.62nM
    PDBbind: -logKd/Ki=9.21, Ki=0.62nM
    BindingDB: Ki=0.620000nM
    24247 6phr:A (1.65) BS01 SS9 ? GO:0004407 ... A0A0J7JFD7 31436969 MOAD: ic50=160uM
    PDBbind: -logKd/Ki=6.70, Kd=0.2uM
    24248 6phr:B (1.65) BS01 SS9 ? GO:0004407 ... A0A0J7JFD7 31436969 MOAD: ic50=160uM
    PDBbind: -logKd/Ki=6.70, Kd=0.2uM
    24249 6pht:A (1.8) BS01 OKP ? GO:0004407 ... A0A0J7JFD7 31436969 MOAD: ic50=390uM
    PDBbind: -logKd/Ki=3.41, IC50=390uM
    24250 6phz:A (2.0) BS03 FKS ? GO:0004407 ... A0A0J7JFD7 31436969 MOAD: ic50=350uM
    PDBbind: -logKd/Ki=3.46, IC50=350uM
    24251 6phz:B (2.0) BS03 FKS ? GO:0004407 ... A0A0J7JFD7 31436969 MOAD: ic50=350uM
    PDBbind: -logKd/Ki=3.46, IC50=350uM
    24252 6pi1:A (1.7) BS03 B3N ? GO:0004407 ... A0A0J7JFD7 31436969 MOAD: ic50=160uM
    PDBbind: -logKd/Ki=3.80, IC50=160uM
    24253 6pi1:B (1.7) BS03 B3N ? GO:0004407 ... A0A0J7JFD7 31436969 MOAD: ic50=160uM
    PDBbind: -logKd/Ki=3.80, IC50=160uM
    24254 6pi5:A (1.67) BS01 GUN ? GO:0005886 ... Q936X6 31692473 MOAD: Kd=0.11uM
    PDBbind: -logKd/Ki=6.96, Kd=0.11uM
    24255 6pi6:A (1.65) BS01 OKM ? GO:0005886 ... Q936X6 31692473 MOAD: Kd=2.2uM
    PDBbind: -logKd/Ki=5.66, Kd=2.2uM
    24256 6pia:A (1.75) BS03 XS6 ? GO:0004407 ... A0A0J7JFD7 31436969 MOAD: ic50=550uM
    PDBbind: -logKd/Ki=4.96, Kd=11.0uM
    24257 6pia:B (1.75) BS03 XS6 ? GO:0004407 ... A0A0J7JFD7 31436969 MOAD: ic50=550uM
    PDBbind: -logKd/Ki=4.96, Kd=11.0uM
    24258 6pid:A (1.546) BS04 OKS ? GO:0004407 ... A0A0J7JFD7 31436969 MOAD: ic50=380uM
    PDBbind: -logKd/Ki=4.54, Kd=29.0uM
    24259 6pid:B (1.546) BS03 OKS ? GO:0004407 ... A0A0J7JFD7 31436969 MOAD: ic50=380uM
    PDBbind: -logKd/Ki=4.54, Kd=29.0uM
    24260 6pii:A (1.87) BS01 GUN ? GO:0005886 ... Q936X6 31692473 PDBbind: -logKd/Ki=6.96, Kd=0.11uM
    24261 6pk7:A (3.1) BS02 CTP 6.3.4.2 GO:0003883 ... Q9NRF8 31873303 PDBbind: -logKd/Ki=4.72, IC50=19.2uM
    24262 6pk7:A (3.1) BS03 CTP 6.3.4.2 GO:0003883 ... Q9NRF8 31873303 PDBbind: -logKd/Ki=4.72, IC50=19.2uM
    24263 6pk7:A (3.1) BS04 CTP 6.3.4.2 GO:0003883 ... Q9NRF8 31873303 PDBbind: -logKd/Ki=4.72, IC50=19.2uM
    24264 6pk7:D (3.1) BS01 CTP 6.3.4.2 GO:0003883 ... Q9NRF8 31873303 PDBbind: -logKd/Ki=4.72, IC50=19.2uM
    24265 6pk7:D (3.1) BS03 CTP 6.3.4.2 GO:0003883 ... Q9NRF8 31873303 PDBbind: -logKd/Ki=4.72, IC50=19.2uM
    24266 6pk7:D (3.1) BS04 CTP 6.3.4.2 GO:0003883 ... Q9NRF8 31873303 PDBbind: -logKd/Ki=4.72, IC50=19.2uM
    24267 6pl1:A (2.03) BS01 OOJ 2.7.10.1 GO:0004672 ... P04629 31610943 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=7.65, Kd=22.2nM
    BindingDB: Ki=67nM, Kd=1.1nM, IC50=263nM
    24268 6pl2:A (2.59) BS01 OOM 2.7.10.1 GO:0004672 ... P04629 31444087 PDBbind: -logKd/Ki=8.06, Kd=8.74nM
    24269 6pl3:A (3.0) BS01 OOD 2.7.10.1 GO:0004672 ... P04629 31444087 PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3.0nM
    24270 6plf:A (1.7) BS01 ONV 1.1.1.37
    1.1.1.399
    1.1.1.95    		 GO:0016616 ... O43175 31327531 MOAD: ic50=0.238uM
    PDBbind: -logKd/Ki=6.67, Ki=214nM
    BindingDB: IC50=238nM, Ki=214nM
    24271 6plg:A (2.93) BS01 ONS 1.1.1.37
    1.1.1.399
    1.1.1.95    		 GO:0016616 ... O43175 31327531 PDBbind: -logKd/Ki=7.82, IC50=0.015uM
    BindingDB: IC50=15nM
    24272 6pm9:A (2.86) BS01 OQ1 3.2.1.169 N/A O60502 31487175 PDBbind: -logKd/Ki=8.10, Ki=7.9nM
    BindingDB: Ki=5.70nM, EC50=53nM, IC50=7.9nM
    24273 6pml:A (2.0) BS01 OR4 ? GO:0003756 ... P0AEG4 31635355 MOAD: Kd=820uM
    PDBbind: -logKd/Ki=3.09, Kd=820uM
    24274 6pnm:A (1.82) BS01 XX0 1.20.4.2
    1.8.5.1
    2.5.1.18    		 GO:0004364 ... P78417 32105470 PDBbind: -logKd/Ki=5.17, Ki=6.7uM
    BindingDB: Ki=6700nM, IC50=160nM
    24275 6pnn:A (2.1) BS01 OR7 1.20.4.2
    1.8.5.1
    2.5.1.18    		 GO:0004364 ... P78417 32105470 PDBbind: -logKd/Ki=5.16, Ki=6.9uM
    BindingDB: IC50=80nM, Ki=6900nM
    24276 6pno:A (1.82) BS01 ORM 1.20.4.2
    1.8.5.1
    2.5.1.18    		 GO:0004364 ... P78417 32105470 PDBbind: -logKd/Ki=5.32, Ki=4.8uM
    BindingDB: Ki=4800nM, IC50=70nM
    24277 6poh:A (1.67) BS01 OVG ? GO:0003756 ... P0AEG4 31635355 MOAD: Kd=1970uM
    PDBbind: -logKd/Ki=2.71, Kd=1970uM
    24278 6poi:A (1.77) BS01 OVS ? GO:0003756 ... P0AEG4 31635355 MOAD: Kd=326uM
    PDBbind: -logKd/Ki=3.49, Kd=326uM
    24279 6poq:A (1.8) BS01 OVJ ? GO:0003756 ... P0AEG4 31635355 MOAD: Kd=2700uM
    PDBbind: -logKd/Ki=2.57, Kd=2700uM
    24280 6ppy:A (2.0) BS01 OVY 2.5.1.56 GO:0016051 ... H2VFG5 31549502 PDBbind: -logKd/Ki=4.44, Ki=36uM
    24281 6prc:L (2.3) BS04 CEB ? GO:0009772 ... P06009 10024457 PDBbind: -logKd/Ki=4.77, IC50=17uM
    24282 6prt:A (1.3) BS01 OWA ? N/A O60885 31727451 MOAD: ic50=2120uM
    PDBbind: -logKd/Ki=2.67, IC50=2120uM
    BindingDB: IC50=2120000nM
    24283 6ps0:A (3.4) BS01 CAU ?
    3.2.1.17    		 GO:0003796 ... D9IEF7
    P07550    		 31709066 PDBbind: -logKd/Ki=9.94, Ki=0.114nM
    24284 6ps1:A (3.2) BS01 TIM ?
    3.2.1.17    		 GO:0003796 ... D9IEF7
    P07550    		 31709066 PDBbind: -logKd/Ki=9.70, Ki=0.201nM
    24285 6ps3:A (2.5) BS01 CVD ?
    3.2.1.17    		 GO:0003796 ... D9IEF7
    P07550    		 31709066 MOAD: Ki=0.166nM
    PDBbind: -logKd/Ki=9.78, Ki=0.166nM
    24286 6ps4:A (2.6) BS01 JRZ ?
    3.2.1.17    		 GO:0003796 ... D9IEF7
    P07550    		 31709066 PDBbind: -logKd/Ki=9.89, Ki=0.13nM
    24287 6ps5:A (2.9) BS01 SNP ?
    3.2.1.17    		 GO:0003796 ... D9IEF7
    P07550    		 31709066 PDBbind: -logKd/Ki=8.43, Ki=3.69nM
    24288 6ps6:A (2.7) BS01 TIM ?
    3.2.1.17    		 GO:0003796 ... D9IEF7
    P07550    		 31709066 PDBbind: -logKd/Ki=9.70, Ki=0.201nM
    24289 6ps9:A (1.21) BS01 Y17 ? N/A O60885 31727451 MOAD: ic50=79uM
    PDBbind: -logKd/Ki=4.62, IC50=24uM
    BindingDB: IC50=79000nM
    24290 6psb:A (1.59) BS01 Y18 ? N/A O60885 31727451 MOAD: ic50=24uM
    PDBbind: -logKd/Ki=4.10, IC50=79uM
    BindingDB: IC50=24000nM
    24291 6pt3:A (3.3) BS01 OWY ? GO:0004930 ... P41143 31807708 PDBbind: -logKd/Ki=9.41, Ki=0.39nM
    24292 6pun:A (2.099) BS01 rna ? GO:0003723 ... Q09312 31397673 PDBbind: Kd=111.7nM
    24293 6pun:C (2.099) BS01 rna ? GO:0003723 ... Q09312 31397673 PDBbind: Kd=111.7nM
    24294 6pve:A (2.3) BS01 OZP 2.1.1.1 GO:0005737 ... P40261 31724854 MOAD: Ki=43nM
    PDBbind: -logKd/Ki=7.37, Ki=43nM
    24295 6pvs:A (2.575) BS01 P0V 2.1.1.1 GO:0005737 ... P40261 31724854 PDBbind: -logKd/Ki=8.17, Ki=6.8nM
    24296 6pvu:A (1.49) BS01 P0S 4.6.1.18 GO:0003676 ... P61823 31651164 PDBbind: -logKd/Ki=5.21, Ki=6.2uM
    24297 6pvw:A (1.6) BS01 OZV 4.6.1.18 GO:0003676 ... P61823 31651164 MOAD: Ki=0.48uM
    PDBbind: -logKd/Ki=6.32, Ki=0.48uM
    24298 6pvx:A (1.55) BS01 U5F 4.6.1.18 GO:0003676 ... P61823 31651164 MOAD: Ki=0.068uM
    PDBbind: -logKd/Ki=7.17, Ki=0.068uM
    24299 6pvx:A (1.55) BS02 U5F 4.6.1.18 GO:0003676 ... P61823 31651164 MOAD: Ki=0.068uM
    PDBbind: -logKd/Ki=7.17, Ki=0.068uM
    24300 6pvy:A (1.74) BS01 OZG ? GO:0003756 ... P0AEG4 31635355 MOAD: Kd=639uM
    PDBbind: -logKd/Ki=3.19, Kd=639uM
    24301 6pvz:A (1.99) BS01 OZM ? GO:0003756 ... P0AEG4 31635355 MOAD: Kd=341uM
    PDBbind: -logKd/Ki=3.47, Kd=341uM
    24302 6pw2:A (3.01) BS01 dna 3.1.21.- GO:0003677 ... P03211 31142669 PDBbind: Kd=35.5nM
    24303 6pw2:A (3.01) BS02 dna 3.1.21.- GO:0003677 ... P03211 31142669 PDBbind: Kd=35.5nM
    24304 6pw2:B (3.01) BS01 dna 3.1.21.- GO:0003677 ... P03211 31142669 PDBbind: Kd=35.5nM
    24305 6pw2:B (3.01) BS02 dna 3.1.21.- GO:0003677 ... P03211 31142669 PDBbind: Kd=35.5nM
    24306 6pw2:C (3.01) BS01 dna 3.1.21.- GO:0003677 ... P03211 31142669 PDBbind: Kd=35.5nM
    24307 6pw2:C (3.01) BS02 dna 3.1.21.- GO:0003677 ... P03211 31142669 PDBbind: Kd=35.5nM
    24308 6pw2:D (3.01) BS01 dna 3.1.21.- GO:0003677 ... P03211 31142669 PDBbind: Kd=35.5nM
    24309 6pw2:D (3.01) BS02 dna 3.1.21.- GO:0003677 ... P03211 31142669 PDBbind: Kd=35.5nM
    24310 6pw2:I (3.01) BS01 dna 3.1.21.- GO:0003677 ... P03211 31142669 PDBbind: Kd=35.5nM
    24311 6pw2:I (3.01) BS02 dna 3.1.21.- GO:0003677 ... P03211 31142669 PDBbind: Kd=35.5nM
    24312 6pw2:J (3.01) BS01 dna 3.1.21.- GO:0003677 ... P03211 31142669 PDBbind: Kd=35.5nM
    24313 6pw2:J (3.01) BS02 dna 3.1.21.- GO:0003677 ... P03211 31142669 PDBbind: Kd=35.5nM
    24314 6pw2:K (3.01) BS01 dna 3.1.21.- GO:0003677 ... P03211 31142669 PDBbind: Kd=35.5nM
    24315 6pw2:K (3.01) BS02 dna 3.1.21.- GO:0003677 ... P03211 31142669 PDBbind: Kd=35.5nM
    24316 6pw2:L (3.01) BS01 dna 3.1.21.- GO:0003677 ... P03211 31142669 PDBbind: Kd=35.5nM
    24317 6pw2:L (3.01) BS02 dna 3.1.21.- GO:0003677 ... P03211 31142669 PDBbind: Kd=35.5nM
    24318 6py0:A (2.204) BS01 RTL ? GO:0005576 ... P04918 31484771 PDBbind: -logKd/Ki=6.41, Kd=386nM
    24319 6pya:A (1.71) BS01 P57 ? N/A P04278 31852737 MOAD: ic50=150nM
    PDBbind: -logKd/Ki=6.82, IC50=150nM
    24320 6pyb:A (1.8) BS01 P5G ? N/A P04278 31852737 MOAD: ic50=4200nM
    PDBbind: -logKd/Ki=5.38, IC50=4200nM
    BindingDB: IC50=2600nM, Kd=309nM
    24321 6pyc:H (3.6) BS01 P4S N/A N/A N/A 31879340 PDBbind: -logKd/Ki=7.45, Kd=35.8nM
    24322 6pyc:H (3.6) BS02 P4S N/A N/A N/A 31879340 PDBbind: -logKd/Ki=7.45, Kd=35.8nM
    24323 6pyc:L (3.6) BS01 P4S N/A N/A N/A 31879340 PDBbind: -logKd/Ki=7.45, Kd=35.8nM
    24324 6pyd:H (2.0) BS01 P4S N/A N/A N/A 31879340 PDBbind: -logKd/Ki=6.81, Kd=156nM
    24325 6pyd:L (2.0) BS01 P4S N/A N/A N/A 31879340 PDBbind: -logKd/Ki=6.81, Kd=156nM
    24326 6pyr:A (2.21) BS01 P5J 2.7.1.137
    2.7.1.153    		 GO:0001779 ... O00329 31416665 MOAD: ic50=1nM
    PDBbind: -logKd/Ki=9.00, IC50=1nM
    BindingDB: IC50=1.000000nM
    24327 6pys:A (2.19) BS01 P5J 2.7.11.1
    2.7.1.137
    2.7.1.153    		 GO:0016301 ... P42336 31416665 PDBbind: -logKd/Ki=7.15, IC50=70nM
    24328 6pyu:A (2.54) BS01 P5V 2.7.1.137
    2.7.1.153    		 GO:0001779 ... O00329 31416665 PDBbind: -logKd/Ki=8.00, IC50=10nM
    BindingDB: IC50=10.0nM
    24329 6pz4:A (1.85) BS01 P6J 3.4.23.46 GO:0004190 ... P56817 31589043 MOAD: ic50=0.4nM
    PDBbind: -logKd/Ki=9.40, IC50=0.0004uM
    BindingDB: IC50=1.2nM
    24330 6q2y:A (1.0) BS05 HCQ 3.5.2.6 N/A C7C422 30996812 PDBbind: -logKd/Ki=5.26, Ki=5.5uM
    24331 6q30:A (1.5) BS05 HCH 3.5.2.6 N/A C7C422 30996812 PDBbind: -logKd/Ki=5.52, Ki=3uM
    24332 6q35:A (1.4) BS01 HD5 3.5.2.6 GO:0008800 ... Q09HD0 30996812 PDBbind: -logKd/Ki=4.82, Ki=15uM
    24333 6q37:A (2.211) BS03 HE8 3.5.3.1 GO:0004053 ... P78540 31408339 MOAD: ic50=440nM
    PDBbind: -logKd/Ki=6.36, IC50=440nM
    24334 6q39:A (2.213) BS03 HDQ 3.5.3.1 GO:0004053 ... P78540 31408339 MOAD: ic50=16nM
    PDBbind: -logKd/Ki=7.85, IC50=14nM
    24335 6q3y:A (1.2) BS01 HG5 ? N/A O60885 30789735 MOAD: Kd=54nM
    PDBbind: -logKd/Ki=7.27, Kd=54nM
    BindingDB: IC50=540nM, Kd=54nM
    24336 6q3y:A (1.2) BS02 HG5 ? N/A O60885 30789735 MOAD: Kd=54nM
    PDBbind: -logKd/Ki=7.27, Kd=54nM
    BindingDB: IC50=540nM, Kd=54nM
    24337 6q3z:A (2.0) BS01 HG8 ? N/A O60885 30789735 MOAD: Kd=44nM
    PDBbind: -logKd/Ki=7.36, Kd=44nM
    BindingDB: Kd=44nM, IC50=260nM
    24338 6q4e:A (1.06) BS01 HH5 2.7.11.22 GO:0000082 ... P24941 30860382 MOAD: Kd=350uM
    PDBbind: -logKd/Ki=3.46, Kd=350uM
    24339 6q4g:A (0.98) BS01 HJK 2.7.11.22 GO:0000082 ... P24941 30860382 MOAD: Kd=50uM
    PDBbind: -logKd/Ki=4.30, Kd=50uM
    BindingDB: Kd=50000nM
    24340 6q54:A (1.4) BS01 HJ8 ? GO:0015276 ... P19491 30943028 PDBbind: -logKd/Ki=6.49, Ki=0.32uM
    BindingDB: EC50=65000nM, Ki=710nM
    24341 6q5b:A (2.22) BS01 NXL 3.5.2.6 GO:0008658 ... Q6XEC0 30918055 PDBbind: -logKd/Ki=5.89, IC50=1.3uM
    24342 6q60:A (1.55) BS01 HJH ? GO:0015276 ... P19491 30943028 PDBbind: -logKd/Ki=5.71, Ki=1.97uM
    BindingDB: Ki=1970nM
    24343 6q6f:A (3.3) BS01 HJQ 1.1.1.42 GO:0000287 ... O75874 31586149 PDBbind: -logKd/Ki=3.35, Kd=445.9uM
    24344 6q6m:A (2.35) BS01 HJW ? GO:0003677 ... P51449 31729873 MOAD: ic50=128nM
    PDBbind: -logKd/Ki=6.89, IC50=128nM
    BindingDB: IC50=128nM
    24345 6q6o:A (2.3) BS01 HKE ? GO:0003677 ... P51449 31729873 MOAD: ic50=29nM
    PDBbind: -logKd/Ki=7.54, IC50=29nM
    BindingDB: IC50=452nM
    24346 6q6y:A (2.03) BS01 HKQ 2.7.1.137
    2.7.1.153    		 GO:0016301 ... O35904 30532965 PDBbind: -logKd/Ki=6.00, IC50=1uM
    24347 6q73:A (2.21) BS01 HKK 2.7.1.137
    2.7.1.153    		 GO:0016301 ... O35904 30532965 PDBbind: -logKd/Ki=6.90, IC50=0.126uM
    24348 6q74:A (2.48) BS01 HKN 2.7.1.137
    2.7.1.153    		 GO:0016301 ... O35904 30532965 PDBbind: -logKd/Ki=8.20, IC50=6.3nM
    24349 6q7a:A (2.2) BS01 HKZ ? GO:0003677 ... P51449 31729873 MOAD: ic50=29nM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    BindingDB: IC50=160nM
    24350 6q7h:A (2.3) BS01 HL8 ? GO:0003677 ... P51449 31729873 MOAD: ic50=21nM
    PDBbind: -logKd/Ki=7.68, IC50=21nM
    BindingDB: IC50=21nM
    24351 6q7h:A (2.3) BS02 HL8 ? GO:0003677 ... P51449 31729873 MOAD: ic50=21nM
    PDBbind: -logKd/Ki=7.68, IC50=21nM
    BindingDB: IC50=21nM
    24352 6q7v:A (2.56) BS01 HLK ? N/A Q9I4X0 31709767 PDBbind: -logKd/Ki=5.59, IC50=2.6uM
    24353 6q7v:B (2.56) BS01 HLK ? N/A Q9I4X0 31709767 PDBbind: -logKd/Ki=5.59, IC50=2.6uM
    24354 6q7w:A (2.82) BS01 HLQ ? N/A Q9I4X0 31709767 PDBbind: -logKd/Ki=6.85, IC50=0.14uM
    24355 6q89:A (2.21) BS01 LSS N/A GO:0000166 ... N/A 30995568 PDBbind: -logKd/Ki=9.85, Ki=0.14nM
    24356 6q8a:A (2.11) BS01 HQ5 6.1.1.4 GO:0000166 ... B4RNT1 30995568 PDBbind: -logKd/Ki=8.01, Ki=9.8nM
    24357 6q8b:A (2.2) BS01 L3U N/A GO:0000166 ... N/A 30995568 PDBbind: -logKd/Ki=7.53, Ki=29.5nM
    24358 6q8c:A (2.31) BS01 LSU N/A GO:0000166 ... N/A 30995568 PDBbind: -logKd/Ki=7.68, Ki=20.8nM
    24359 6q8k:A (2.29) BS01 FG9 2.7.12.1 GO:0004672 ... P49759 30731399 MOAD: ic50=290nM
    PDBbind: -logKd/Ki=6.54, IC50=290nM
    24360 6q8p:A (3.0) BS01 HQB 2.7.12.1 GO:0004672 ... P49759 30731399 PDBbind: -logKd/Ki=7.74, IC50=18nM
    24361 6q92:A (1.5) BS03 ABH 3.5.3.1 GO:0000050 ... P05089 32647818 PDBbind: -logKd/Ki=6.10, Kd=797nM
    24362 6q96:A (1.8) BS01 HRE 2.3.2.27 GO:0005634 ... Q00987 31066983 MOAD: ic50=0.1nM
    PDBbind: -logKd/Ki=10.00, IC50=0.10nM
    BindingDB: IC50=0.166nM
    24363 6q9h:A (2.0) BS01 HRH 2.3.2.27 GO:0005634 ... Q00987 31066983 MOAD: ic50=7.8nM
    PDBbind: -logKd/Ki=8.11, IC50=7.8nM
    24364 6q9l:A (1.13) BS01 HTZ 2.3.2.27 GO:0005634 ... Q00987 31066983 MOAD: ic50=3.9nM
    PDBbind: -logKd/Ki=8.41, IC50=3.9nM
    24365 6q9o:A (1.21) BS01 HU8 2.3.2.27 GO:0005634 ... Q00987 31066983 MOAD: ic50=3.4nM
    PDBbind: -logKd/Ki=8.47, IC50=3.4nM
    24366 6q9o:A (1.21) BS02 HU8 2.3.2.27 GO:0005634 ... Q00987 31066983 MOAD: ic50=3.4nM
    PDBbind: -logKd/Ki=8.47, IC50=3.4nM
    24367 6q9q:A (2.1) BS01 HUE ? GO:0005634 ... O15151 31066983 MOAD: ic50=145nM
    PDBbind: -logKd/Ki=6.84, IC50=145nM
    24368 6q9s:A (2.4) BS01 HRN ? GO:0005634 ... O15151 31066983 MOAD: ic50=17nM
    PDBbind: -logKd/Ki=7.77, IC50=17nM
    24369 6q9u:A (2.4) BS01 HRE ? GO:0005634 ... O15151 31066983 MOAD: ic50=1300nM
    PDBbind: -logKd/Ki=5.89, IC50=1300nM
    24370 6q9w:A (1.55) BS01 HRT ? GO:0005634 ... O15151 31066983 MOAD: ic50=580nM
    PDBbind: -logKd/Ki=6.24, IC50=580nM
    24371 6q9y:A (1.2) BS01 HRQ ? GO:0005634 ... O15151 31066983 MOAD: ic50=3700nM
    PDBbind: -logKd/Ki=5.43, IC50=3700nM
    24372 6q9y:A (1.2) BS02 HRQ ? GO:0005634 ... O15151 31066983 MOAD: ic50=3700nM
    PDBbind: -logKd/Ki=5.43, IC50=3700nM
    24373 6qaa:A (1.897) BS02 HUN 3.1.1.8 GO:0004104 ... P06276 30864579 MOAD: ic50=22nM
    PDBbind: -logKd/Ki=7.66, IC50=22nM
    24374 6qab:A (2.49) BS02 HUQ 3.1.1.8 GO:0004104 ... P06276 30864579 MOAD: ic50=6.2nM
    PDBbind: -logKd/Ki=8.21, IC50=6.2nM
    24375 6qac:A (2.771) BS01 HUT 3.1.1.8 GO:0004104 ... P06276 30864579 PDBbind: -logKd/Ki=8.21, IC50=6.2nM
    24376 6qad:A (2.497) BS01 HUZ 3.1.1.8 GO:0004104 ... P06276 30864579 MOAD: ic50=14nM
    PDBbind: -logKd/Ki=7.85, IC50=14nM
    24377 6qae:A (2.487) BS02 HUK 3.1.1.8 GO:0004104 ... P06276 30864579 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3.0nM
    24378 6qaf:A (1.61) BS03 XC3 3.5.3.1 GO:0000050 ... P05089 32647818 PDBbind: -logKd/Ki=7.42, Kd=38nM
    24379 6qat:A (2.77) BS01 FE7 2.7.11.1 GO:0004672 ... Q8IYT8 30782972 PDBbind: -logKd/Ki=7.33, Kd=47.3nM
    24380 6qav:A (2.05) BS01 HVH 2.7.11.1 GO:0004672 ... Q8IYT8 30782972 PDBbind: -logKd/Ki=8.31, Kd=4.9nM
    BindingDB: IC50=1.1nM
    24381 6qcj:A (2.01) BS03 XEG 2.3.1.-
    2.3.1.286
    2.4.2.-    		 GO:0070403 ... Q8N6T7 31844103 PDBbind: -logKd/Ki=5.60, IC50=2.5uM
    24382 6qdx:A (2.1) BS01 HY8 2.1.1.266 GO:0003676 ... P37634 30879411 MOAD: Kd=30uM
    PDBbind: -logKd/Ki=4.52, Kd=30uM
    24383 6qe0:A (1.394) BS01 HZ2 2.1.1.266 GO:0003676 ... P37634 30879411 MOAD: Kd=25uM
    PDBbind: -logKd/Ki=4.60, Kd=25uM
    24384 6qe5:A (1.61) BS01 SAH 2.1.1.266 GO:0003676 ... P37634 30879411 MOAD: Kd=7.5uM
    PDBbind: -logKd/Ki=5.12, Kd=7.5uM
    24385 6qed:A (1.8) BS01 HZK 3.4.11.18 GO:0006508 ... P50579 30939017 MOAD: ic50=0.015uM
    PDBbind: -logKd/Ki=7.13, IC50=0.074uM
    BindingDB: IC50=15nM, Ki=0.160000nM
    24386 6qef:A (1.79) BS01 HZW 3.4.11.18 GO:0006508 ... P50579 30939017 MOAD: ic50=0.06uM
    PDBbind: -logKd/Ki=7.22, IC50=0.06uM
    BindingDB: IC50=60nM
    24387 6qeg:A (2.08) BS01 K4K 3.4.11.18 GO:0006508 ... P50579 30939017 MOAD: ic50=0.05uM
    PDBbind: -logKd/Ki=7.30, IC50=0.05uM
    BindingDB: IC50=50nM
    24388 6qfd:A (2.133) BS01 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=91.59nM
    24389 6qfd:A (2.133) BS02 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=91.59nM
    24390 6qfd:B (2.133) BS01 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=91.59nM
    24391 6qfd:B (2.133) BS02 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=91.59nM
    24392 6qfd:C (2.133) BS01 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=91.59nM
    24393 6qfd:C (2.133) BS02 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=91.59nM
    24394 6qfd:D (2.133) BS01 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=91.59nM
    24395 6qfd:D (2.133) BS02 dna ? GO:0046872 ... Q9HSF4 31310308 PDBbind: Kd=91.59nM
    24396 6qfe:A (1.67) BS01 J08 3.4.21.- GO:0004252 ... Q9Y337 31045568 MOAD: ic50=0.08uM
    PDBbind: -logKd/Ki=7.10, IC50=0.08uM
    24397 6qff:A (1.64) BS01 J08 3.4.21.- GO:0001533 ... Q92876 31045568 MOAD: ic50=2.04uM
    PDBbind: -logKd/Ki=5.69, IC50=2.04uM
    24398 6qfg:A (1.68) BS01 J08 3.4.21.- GO:0001533 ... Q92876 31045568 MOAD: ic50=3.01uM
    PDBbind: -logKd/Ki=5.52, IC50=3.01uM
    24399 6qfg:A (1.68) BS02 J08 3.4.21.- GO:0001533 ... Q92876 31045568 MOAD: ic50=3.01uM
    PDBbind: -logKd/Ki=5.52, IC50=3.01uM
    24400 6qfh:A (1.65) BS01 J08 3.4.21.- GO:0001533 ... Q92876 31045568 MOAD: ic50=1.38uM
    PDBbind: -logKd/Ki=5.86, IC50=1.38uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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