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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    23801 6mo8:A (1.8) BS01 JWD ? N/A P25440 30606676 PDBbind: -logKd/Ki=5.84, IC50=1430nM
    23802 6mo8:A (1.8) BS02 JWD ? N/A P25440 30606676 PDBbind: -logKd/Ki=5.84, IC50=1430nM
    23803 6mo9:A (1.801) BS01 JVY ? N/A P25440 30606676 PDBbind: -logKd/Ki=5.81, IC50=1542nM
    23804 6moa:A (1.271) BS01 JW4 ? N/A P25440 30606676 MOAD: Kd=2.5nM
    PDBbind: -logKd/Ki=7.08, IC50=83nM
    23805 6mob:A (1.8) BS01 JWY 2.7.10.1 GO:0004672 ... P10721 31085175 PDBbind: -logKd/Ki=8.15, IC50=7nM
    23806 6mod:A (1.85) BS02 JWV 3.5.1.108 GO:0006796 ... P47205 31283109 MOAD: ic50=0.71nM
    PDBbind: -logKd/Ki=9.15, IC50=0.71nM
    23807 6mom:A (2.1) BS01 JX4 2.7.11.1 GO:0000287 ... Q9NWZ3 31484791 MOAD: ic50=0.8nM
    PDBbind: -logKd/Ki=9.52, Kd=0.3nM
    23808 6moo:A (2.2) BS02 A5F 3.5.1.108 GO:0006796 ... P47205 31283109 MOAD: ic50=19nM
    PDBbind: -logKd/Ki=9.17, IC50=0.68nM
    23809 6mq3:A (3.56915) BS01 J22 3.4.24.56 GO:0001618 ... P14735 31086331 PDBbind: -logKd/Ki=8.77, Ki=1.7nM
    23810 6mr5:A (1.85) BS02 W45 ? N/A F8W4B7 30613344 PDBbind: -logKd/Ki=7.30, IC50=0.05uM
    23811 6mr5:A (1.85) BS03 W45 ? N/A F8W4B7 30613344 PDBbind: -logKd/Ki=7.30, IC50=0.05uM
    23812 6mrg:A (2.77) BS01 JXV 3.1.1.-
    3.5.1.99    		 GO:0000139 ... P97612 30289722 PDBbind: -logKd/Ki=7.55, IC50=28nM
    23813 6msa:A (2.06) BS02 JY4 3.1.4.17 GO:0004114 ... Q9Y233 30587449 MOAD: ic50=5nM
    PDBbind: -logKd/Ki=7.08, IC50=84nM
    23814 6msc:A (2.36) BS02 JY7 3.1.4.17 GO:0004114 ... Q9Y233 30587449 MOAD: ic50=21nM
    PDBbind: -logKd/Ki=7.68, IC50=21nM
    BindingDB: IC50=21nM
    23815 6msn:A (1.591) BS02 JYD 4.2.1.2 GO:0004333 ... E9AE57 30645090 MOAD: Ki=8.9uM
    PDBbind: -logKd/Ki=4.95, IC50=11.3uM
    23816 6msn:B (1.591) BS02 JYD 4.2.1.2 GO:0004333 ... E9AE57 30645090 MOAD: Ki=8.9uM
    PDBbind: -logKd/Ki=4.95, IC50=11.3uM
    23817 6mso:A (2.053) BS02 JYD 4.2.1.2 GO:0003824 ... Q4QAU9 30645090 MOAD: Ki=3uM
    PDBbind: -logKd/Ki=5.42, IC50=3.8uM
    23818 6mso:B (2.053) BS02 JYD 4.2.1.2 GO:0003824 ... Q4QAU9 30645090 MOAD: Ki=3uM
    PDBbind: -logKd/Ki=5.42, IC50=3.8uM
    23819 6msy:H (1.999) BS01 MAN ? N/A P0DOX5 16174734 PDBbind: -logKd/Ki=7.00, Kd=0.1uM
    23820 6mt0:A (2.2) BS01 JYG 2.7.11.1 GO:0004672 ... P11309 30624936 PDBbind: -logKd/Ki=10.30, IC50=0.05nM
    BindingDB: IC50=0.050000nM
    23821 6mu1:A (4.1) BS01 JYP ? GO:0000902 ... P29994 30470765 PDBbind: -logKd/Ki=8.10, IC50=7.9nM
    23822 6mu3:H (2.327) BS01 MAN ? N/A P0DOX5 16174734 PDBbind: -logKd/Ki=6.15, Kd=0.7uM
    23823 6mu3:H (2.327) BS02 MAN ? N/A P0DOX5 16174734 PDBbind: -logKd/Ki=6.15, Kd=0.7uM
    23824 6mub:H (2.503) BS01 MAN ? N/A P0DOX5 16174734 PDBbind: -logKd/Ki=7.00, Kd=0.1uM
    23825 6mub:H (2.503) BS02 MAN ? N/A P0DOX5 16174734 PDBbind: -logKd/Ki=7.00, Kd=0.1uM
    23826 6mul:A (3.09) BS01 K4A 2.7.1.137
    2.7.1.153    		 GO:0016301 ... O35904 30986068 PDBbind: -logKd/Ki=8.20, IC50=6.3nM
    23827 6mum:A (3.06) BS01 K47 2.7.1.137
    2.7.1.153    		 GO:0016301 ... O35904 30986068 PDBbind: -logKd/Ki=8.41, IC50=3.9nM
    23828 6mv3:A (-1.00) BS02 WW7 ? GO:0005509 ... P19429
    P63316    		 30376637 PDBbind: -logKd/Ki=3.33, Kd=470uM
    23829 6mvu:A (1.488) BS01 K4V ? GO:0000166 ... A0A0Q3EUQ3 30529746 PDBbind: -logKd/Ki=2.89, Ki=1290uM
    23830 6mwe:A (2.05) BS01 919 2.7.10.1 GO:0004672 ... Q02763 28838996 PDBbind: -logKd/Ki=9.20, Kd=0.63nM
    23831 6mwn:C (2.838) BS01 rna N/A N/A N/A 31399592 PDBbind: Kd=44nM
    23832 6mwn:C (2.838) BS02 rna N/A N/A N/A 31399592 PDBbind: Kd=44nM
    23833 6mwn:D (2.838) BS01 rna N/A N/A N/A 31399592 PDBbind: Kd=44nM
    23834 6mwn:D (2.838) BS02 rna N/A N/A N/A 31399592 PDBbind: Kd=44nM
    23835 6mwn:H (2.838) BS01 rna N/A N/A N/A 31399592 PDBbind: Kd=44nM
    23836 6mwn:H (2.838) BS02 rna N/A N/A N/A 31399592 PDBbind: Kd=44nM
    23837 6mwn:L (2.838) BS01 rna N/A N/A N/A 31399592 PDBbind: Kd=44nM
    23838 6mwn:L (2.838) BS02 rna N/A N/A N/A 31399592 PDBbind: Kd=44nM
    23839 6mx3:A (1.362) BS01 K5P ? GO:0002218 ... Q86WV6 30655953 PDBbind: -logKd/Ki=5.14, IC50=7300nM
    BindingDB: IC50=7300nM
    23840 6mx3:A (1.362) BS02 K5P ? GO:0002218 ... Q86WV6 30655953 PDBbind: -logKd/Ki=5.14, IC50=7300nM
    BindingDB: IC50=7300nM
    23841 6mx3:B (1.362) BS01 K5P ? GO:0002218 ... Q86WV6 30655953 PDBbind: -logKd/Ki=5.14, IC50=7300nM
    BindingDB: IC50=7300nM
    23842 6mx3:B (1.362) BS02 K5P ? GO:0002218 ... Q86WV6 30655953 PDBbind: -logKd/Ki=5.14, IC50=7300nM
    BindingDB: IC50=7300nM
    23843 6mx8:A (1.96) BS01 6GY 2.7.10.1 GO:0004672 ... Q9UM73 27144831 MOAD: ic50=0.37nM
    PDBbind: -logKd/Ki=9.43, IC50=0.37nM
    BindingDB: IC50=0.370000nM
    23844 6mxb:A (2.192) BS01 XMP ? GO:0000166 ... Q38CA1 31287615 MOAD: Ki=26uM
    PDBbind: -logKd/Ki=4.59, Ki=26uM
    23845 6mxd:A (2.96) BS01 IMP ? GO:0000166 ... Q38CA1 31287615 PDBbind: -logKd/Ki=5.23, Ki=5.83uM
    23846 6mxe:A (2.47) BS01 K5S ? GO:0002218 ... Q86WV6 30655953 PDBbind: -logKd/Ki=4.26, Kd=55uM
    BindingDB: IC50=68nM, EC50=>30000nM
    23847 6mxe:A (2.47) BS02 K5S ? GO:0002218 ... Q86WV6 30655953 PDBbind: -logKd/Ki=4.26, Kd=55uM
    BindingDB: IC50=68nM, EC50=>30000nM
    23848 6mxe:B (2.47) BS01 K5S ? GO:0002218 ... Q86WV6 30655953 PDBbind: -logKd/Ki=4.26, Kd=55uM
    BindingDB: IC50=68nM, EC50=>30000nM
    23849 6mxe:B (2.47) BS02 K5S ? GO:0002218 ... Q86WV6 30655953 PDBbind: -logKd/Ki=4.26, Kd=55uM
    BindingDB: IC50=68nM, EC50=>30000nM
    23850 6myn:A (2.744) BS01 K6Y 2.7.11.25 GO:0004672 ... Q9WUL6 31531194 PDBbind: -logKd/Ki=7.85, Ki=14nM
    23851 6mzq:A (2.0) BS01 TZ0 2.7.10.1 GO:0004672 ... P11362 30600916 MOAD: ic50=3.9nM
    PDBbind: -logKd/Ki=8.41, IC50=3.9nM
    BindingDB: IC50=3.6nM
    23852 6mzw:A (2.2) BS01 TZ0 2.7.10.1 GO:0004672 ... P11362 30600916 PDBbind: -logKd/Ki=8.41, IC50=3.9nM
    BindingDB: IC50=3.6nM
    23853 6n0j:A (1.79) BS02 K8S 1.13.11.24 GO:0003712 ... O00625 N/A PDBbind: -logKd/Ki=5.37, Kd=4.3uM
    23854 6n0k:A (1.46) BS02 K8M 1.13.11.24 GO:0003712 ... O00625 N/A PDBbind: -logKd/Ki=5.07, Kd=8.6uM
    23855 6n0m:A (3.3) BS01 K94 1.11.1.- GO:0005634 ... P58004 30858438 PDBbind: -logKd/Ki=5.82, Kd=1.5uM
    23856 6n0p:A (2.37) BS01 K81 2.7.11.1 GO:0004672 ... P15056 31059256 MOAD: Kd=1.3nM
    PDBbind: -logKd/Ki=8.89, Kd=1.3nM
    BindingDB: IC50=0.400000nM, Kd=1.3nM
    23857 6n0q:A (2.04) BS01 K7S 2.7.11.1 GO:0004672 ... P15056 31059256 MOAD: ic50=0.04uM
    PDBbind: -logKd/Ki=7.40, IC50=0.04uM
    23858 6n17:A (1.639) BS01 K8Y 3.1.4.- GO:0005634 ... Q9NUW8 31199869 MOAD: ic50=1.01mM
    PDBbind: -logKd/Ki=3.00, IC50=1.01mM
    23859 6n19:A (1.501) BS01 K8V 3.1.4.- GO:0005634 ... Q9NUW8 31199869 MOAD: ic50=0.96mM
    PDBbind: -logKd/Ki=3.02, IC50=0.96mM
    23860 6n3k:A (2.2) BS01 K9V ? GO:0003824 ... G0R7E2 30771398 MOAD: ic50=29nM
    PDBbind: -logKd/Ki=7.54, IC50=29nM
    23861 6n3l:A (2.61) BS01 KAV 2.7.11.1 GO:0004672 ... Q9P2K8 31620240 PDBbind: -logKd/Ki=7.57, IC50=27nM
    23862 6n3n:A (3.01) BS01 KA4 2.7.11.1 GO:0004672 ... Q9P2K8 31620240 PDBbind: -logKd/Ki=8.74, IC50=1.8nM
    23863 6n3o:A (2.4) BS01 KA7 2.7.11.1 GO:0004672 ... Q9P2K8 31620240 MOAD: ic50=2.4nM
    PDBbind: -logKd/Ki=8.62, IC50=2.4nM
    23864 6n3v:A (1.45) BS01 KB7 3.4.22.-
    3.9.1.-    		 GO:0000118 ... P49773 31503445 MOAD: Kd=2.45uM
    PDBbind: -logKd/Ki=5.61, Kd=2.45uM
    23865 6n3w:A (1.75) BS01 KBJ 3.4.22.-
    3.9.1.-    		 GO:0000118 ... P49773 31503445 MOAD: Kd=1.56uM
    PDBbind: -logKd/Ki=5.81, Kd=1.56uM
    23866 6n3x:A (1.1) BS01 KBD 3.4.22.-
    3.9.1.-    		 GO:0000118 ... P49773 31503445 MOAD: Kd=8.09uM
    PDBbind: -logKd/Ki=5.09, Kd=8.09uM
    23867 6n3y:A (1.8) BS01 HHJ 3.4.22.-
    3.9.1.-    		 GO:0000118 ... P49773 31503445 MOAD: Kd=3.65uM
    PDBbind: -logKd/Ki=5.44, Kd=3.65uM
    23868 6n3y:B (1.8) BS01 HHJ 3.4.22.-
    3.9.1.-    		 GO:0000118 ... P49773 31503445 PDBbind: -logKd/Ki=5.44, Kd=3.65uM
    23869 6n3z:A (2.238) BS01 KC4 ? GO:0003824 ... G0R7E2 30771398 MOAD: ic50=259.3nM
    PDBbind: -logKd/Ki=6.59, IC50=259.3nM
    23870 6n48:A (3.2) BS03 KBY 3.2.1.17 GO:0003796 ... P07550 31249059 PDBbind: -logKd/Ki=5.92, Kd=1.2uM
    23871 6n4b:R (3.0) BS01 KCA ? GO:0004930 ... P21554 30639101 PDBbind: -logKd/Ki=10.01, Ki=0.098nM
    23872 6n4e:A (1.65) BS02 KCD 2.5.1.18
    5.3.99.2    		 GO:0000287 ... O60760 30858025 MOAD: ic50=9.9nM
    PDBbind: -logKd/Ki=8.00, IC50=9.9nM
    BindingDB: IC50=9.9nM, Kd=0.500000nM
    23873 6n4t:A (1.945) BS03 KD7 3.4.21.109 GO:0004252 ... Q9Y5Y6 31543462 PDBbind: -logKd/Ki=8.09, IC50=8.1nM
    23874 6n53:A (2.7) BS01 UZR 2.7.1.48 GO:0004849 ... Q9BZX2 32015544 PDBbind: -logKd/Ki=7.87, Kd=13.4nM
    23875 6n54:A (2.424) BS01 KEA 2.7.1.48 GO:0004849 ... Q9BZX2 32015544 PDBbind: -logKd/Ki=7.75, Kd=17.8nM
    23876 6n55:F (3.085) BS01 UZ0 2.7.1.48 GO:0004849 ... Q9BZX2 32015544 PDBbind: -logKd/Ki=7.87, Kd=13.4nM
    23877 6n5c:A (1.95) BS05 KDJ 2.7.4.24 GO:0000829 ... O43314 31391889 PDBbind: -logKd/Ki=6.43, IC50=375nM
    23878 6n5f:A (1.93) BS01 KJ1 ? GO:0003824 ... G0R7E2 30771398 MOAD: ic50=138.8nM
    PDBbind: -logKd/Ki=6.86, IC50=138.8nM
    23879 6n5g:A (2.6) BS01 KDS ? GO:0003824 ... G0R7E2 30771398 PDBbind: -logKd/Ki=7.00, IC50=99nM
    23880 6n5h:A (1.717) BS01 AUB ? GO:0003824 ... G0R7E2 30771398 MOAD: ic50=357.9nM
    PDBbind: -logKd/Ki=6.45, IC50=357.9nM
    23881 6n69:A (2.0) BS02 KDV 2.5.1.18
    5.3.99.2    		 GO:0000287 ... O35543 30858025 MOAD: ic50=220000nM
    PDBbind: -logKd/Ki=4.30, IC50>50000nM
    23882 6n6o:A (2.6) BS01 KE7 2.7.12.1 GO:0004672 ... P33981 30998356 PDBbind: -logKd/Ki=9.15, IC50=0.0007uM
    BindingDB: IC50=0.700000nM
    23883 6n77:A (1.64) BS01 KEJ 2.7.10.2 GO:0004672 ... P23458 30981576 MOAD: Ki=0.57nM
    PDBbind: -logKd/Ki=9.24, Ki=0.57nM
    23884 6n78:A (1.83) BS01 KEP 2.7.10.2 GO:0004672 ... P23458 30981576 MOAD: Ki=0.21nM
    PDBbind: -logKd/Ki=9.68, Ki=0.21nM
    23885 6n79:A (2.27) BS01 KES 2.7.10.2 GO:0004672 ... P23458 30981576 MOAD: Ki=0.21nM
    PDBbind: -logKd/Ki=9.68, Ki=0.21nM
    23886 6n7a:A (1.33) BS01 KEV 2.7.10.2 GO:0004672 ... P23458 30981576 MOAD: Ki=4.3nM
    PDBbind: -logKd/Ki=8.37, Ki=4.3nM
    23887 6n7b:A (1.81) BS01 KEY 2.7.10.2 GO:0004672 ... P23458 30981576 MOAD: Ki=0.6nM
    PDBbind: -logKd/Ki=9.22, Ki=0.6nM
    23888 6n7c:A (1.69) BS01 KF1 2.7.10.2 GO:0004672 ... P23458 30981576 MOAD: Ki=0.67nM
    PDBbind: -logKd/Ki=9.17, Ki=0.67nM
    23889 6n7d:A (1.78) BS01 KF4 2.7.10.2 GO:0004672 ... P23458 30981576 MOAD: Ki=0.3nM
    PDBbind: -logKd/Ki=9.52, Kd=0.3nM
    23890 6n7y:F (2.0) BS01 KFA 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 31577901 MOAD: ic50=7.7uM
    PDBbind: -logKd/Ki=5.11, IC50=7.7uM
    BindingDB: IC50=7700nM
    23891 6n7z:F (2.55) BS01 KF7 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 31577901 PDBbind: -logKd/Ki=5.55, IC50=2.8uM
    BindingDB: IC50=2800nM
    23892 6n82:F (2.0) BS01 YF7 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 31577901 MOAD: ic50=1.1uM
    PDBbind: -logKd/Ki=5.96, IC50=1.1uM
    BindingDB: IC50=860nM
    23893 6n82:F (2.0) BS02 YF7 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 31577901 MOAD: ic50=1.1uM
    PDBbind: -logKd/Ki=5.96, IC50=1.1uM
    BindingDB: IC50=860nM
    23894 6n83:F (2.0) BS01 YL6 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 31577901 MOAD: ic50=0.54uM
    PDBbind: -logKd/Ki=6.27, IC50=0.54uM
    23895 6n8x:A (1.49484) BS01 KFY 3.6.4.10 GO:0005524 ... P07900 31141217 MOAD: Kd=2uM
    PDBbind: -logKd/Ki=5.70, Kd=2.0uM
    23896 6n8y:A (1.55391) BS01 KFY ? GO:0005524 ... P08238 31141217 MOAD: Kd=4.2uM
    PDBbind: -logKd/Ki=5.38, Kd=4.2uM
    23897 6n92:A (1.7) BS01 KFV 4.1.1.- GO:0003824 ... P52045 30869886 MOAD: Ki=10.8uM
    PDBbind: -logKd/Ki=4.97, Ki=10.8uM
    23898 6n92:C (1.7) BS01 KFV 4.1.1.- GO:0003824 ... P52045 30869886 MOAD: Ki=10.8uM
    PDBbind: -logKd/Ki=4.97, Ki=10.8uM
    23899 6n92:C (1.7) BS02 KFV 4.1.1.- GO:0003824 ... P52045 30869886 MOAD: Ki=10.8uM
    PDBbind: -logKd/Ki=4.97, Ki=10.8uM
    23900 6n93:A (1.7) BS01 KGA 4.1.1.- GO:0003824 ... P52045 30869886 MOAD: Ki=20.6uM
    PDBbind: -logKd/Ki=4.69, Kd=20.6uM
    23901 6n94:A (1.75) BS01 KGJ 4.1.1.- GO:0003824 ... P52045 30869886 MOAD: Ki=19.8uM
    PDBbind: -logKd/Ki=4.70, Ki=19.8uM
    23902 6n94:C (1.75) BS01 KGJ 4.1.1.- GO:0003824 ... P52045 30869886 MOAD: Ki=19.8uM
    PDBbind: -logKd/Ki=4.70, Ki=19.8uM
    23903 6n94:C (1.75) BS02 KGJ 4.1.1.- GO:0003824 ... P52045 30869886 MOAD: Ki=19.8uM
    PDBbind: -logKd/Ki=4.70, Ki=19.8uM
    23904 6n95:A (1.798) BS01 YXS 4.1.1.- GO:0003824 ... P52045 30869886 MOAD: Ki=7.5uM
    PDBbind: -logKd/Ki=5.12, Ki=7.5uM
    23905 6n95:C (1.798) BS01 YXS 4.1.1.- GO:0003824 ... P52045 30869886 MOAD: Ki=7.5uM
    PDBbind: -logKd/Ki=5.12, Ki=7.5uM
    23906 6n96:C (1.7) BS01 LCV 4.1.1.- GO:0003824 ... P52045 30869886 MOAD: Ki=3.8uM
    PDBbind: -logKd/Ki=5.42, Ki=3.8uM
    23907 6n96:C (1.7) BS03 LCV 4.1.1.- GO:0003824 ... P52045 30869886 MOAD: Ki=3.8uM
    PDBbind: -logKd/Ki=5.42, Ki=3.8uM
    23908 6n97:A (1.75) BS02 KGP 4.1.1.- GO:0003824 ... P52045 30869886 MOAD: Ki=7.1uM
    PDBbind: -logKd/Ki=5.15, Ki=7.1uM
    23909 6n97:C (1.75) BS02 KGP 4.1.1.- GO:0003824 ... P52045 30869886 MOAD: Ki=7.1uM
    PDBbind: -logKd/Ki=5.15, Ki=7.1uM
    23910 6n9l:A (2.01) BS02 ADP ? GO:0003677 ... Q9WYV0 30892613 MOAD: Kd=0.1uM
    PDBbind: -logKd/Ki=6.70, Kd=0.2uM
    23911 6n9l:A (2.01) BS03 ADP ? GO:0003677 ... Q9WYV0 30892613 MOAD: Kd=0.1uM
    PDBbind: -logKd/Ki=6.70, Kd=0.2uM
    23912 6n9p:A (2.23) BS01 KHD 2.7.10.2 GO:0004672 ... Q06187 30521698 PDBbind: -logKd/Ki=8.40, IC50=4nM
    23913 6nad:A (2.90197) BS01 KHY ? GO:0003677 ... P51449 31010722 PDBbind: -logKd/Ki=9.30, Kd=0.5nM
    BindingDB: Kd=0.500000nM, IC50=14nM
    23914 6nao:A (3.23) BS02 KHM 2.7.7.86 N/A Q8N884 28934246 PDBbind: -logKd/Ki=6.70, Kd=0.2uM
    BindingDB: Kd=200nM, IC50=4900nM
    23915 6nce:A (2.598) BS01 dna ? GO:0003700 ... O00409 30826165 PDBbind: Kd=60nM
    23916 6nce:A (2.598) BS02 dna ? GO:0003700 ... O00409 30826165 PDBbind: Kd=60nM
    23917 6ncj:A (2.0) BS01 KJJ ? GO:0003676 ... F2WR52 30609350 MOAD: ic50=0.024uM
    PDBbind: -logKd/Ki=7.62, IC50=0.024uM
    23918 6ncm:A (2.704) BS01 dna ? GO:0003700 ... O00409 30826165 PDBbind: Kd=238nM
    23919 6ncm:A (2.704) BS02 dna ? GO:0003700 ... O00409 30826165 PDBbind: Kd=238nM
    23920 6ncm:B (2.704) BS01 dna ? GO:0003700 ... O00409 30826165 PDBbind: Kd=238nM
    23921 6ncn:A (1.82) BS01 KJM ? GO:0005576 ... P02649 30933499 MOAD: Kd=900uM
    PDBbind: -logKd/Ki=3.05, Kd=900uM
    23922 6nco:A (1.707) BS01 KQP ? GO:0005576 ... P02649 30933499 MOAD: Kd=30uM
    PDBbind: -logKd/Ki=4.52, Kd=30uM
    23923 6nd3:A (2.364) BS01 BTL 4.3.99.4 GO:0003824 ... Q30W70 30557011 PDBbind: -logKd/Ki=4.59, IC50=26uM
    23924 6ndl:A (2.0) BS01 BQX 6.3.4.15 GO:0003677 ... Q2G258 31407891 MOAD: Ki=0.065uM
    PDBbind: -logKd/Ki=7.19, Ki=0.065uM
    23925 6ne5:A (1.85) BS01 KJP ? GO:0042981 ... Q07820 30929420 MOAD: Ki=0.058nM
    PDBbind: -logKd/Ki=10.52, Ki=0.03nM
    BindingDB: Ki=0.058000nM
    23926 6nel:A (2.0) BS03 KKV ? GO:0003723 ... C6H0Y9 30983160 MOAD: ic50=11nM
    PDBbind: -logKd/Ki=7.96, IC50=11nM
    23927 6nem:A (1.95) BS03 KKS ? GO:0003723 ... C6H0Y9 30983160 MOAD: ic50=12nM
    PDBbind: -logKd/Ki=7.92, IC50=12nM
    23928 6nfg:A (2.76) BS02 KKP 2.7.7.86 N/A Q8N884 N/A PDBbind: -logKd/Ki=4.11, Kd=78uM
    BindingDB: IC50=69000nM, Kd=78000nM
    23929 6nfh:A (1.4) BS01 KLM 2.7.10.2 GO:0004672 ... Q06187 30817167 PDBbind: -logKd/Ki=7.15, Kd=0.07uM
    23930 6nfi:A (2.41) BS01 KLP 2.7.10.2 GO:0004672 ... Q06187 30817167 PDBbind: -logKd/Ki=7.05, Kd=0.09uM
    23931 6nfn:H (2.63) BS01 BCG N/A N/A N/A 31702583 PDBbind: -logKd/Ki=7.70, Kd=20nM
    23932 6nfn:L (2.63) BS01 BCG N/A N/A N/A 31702583 PDBbind: -logKd/Ki=7.70, Kd=20nM
    23933 6nfo:A (2.93) BS02 KKM 2.7.7.86 N/A Q8N884 N/A PDBbind: -logKd/Ki=5.57, Kd=2.7uM
    BindingDB: IC50=8100nM, Kd=2700nM
    23934 6nfy:A (2.17) BS01 B49 2.7.11.1 GO:0004672 ... Q92918 31018963 MOAD: Kd=16nM
    PDBbind: -logKd/Ki=7.80, Kd=16nM
    BindingDB: Kd=16nM
    23935 6nfy:B (2.17) BS01 B49 2.7.11.1 GO:0004672 ... Q92918 31018963 MOAD: Kd=16nM
    PDBbind: -logKd/Ki=7.80, Kd=16nM
    BindingDB: Kd=16nM
    23936 6nfz:A (2.966) BS01 B49 2.7.11.1 GO:0004672 ... Q92918 31018963 PDBbind: -logKd/Ki=7.80, Kd=16nM
    BindingDB: Kd=16nM
    23937 6ng0:A (2.05) BS01 B49 2.7.11.1 GO:0004672 ... Q92918 31018963 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.19, Ki=0.0064uM
    BindingDB: Kd=16nM
    23938 6nj0:A (1.83) BS01 KOY 6.2.1.26 GO:0005524 ... P37353 30912442 MOAD: ic50=8.1uM
    PDBbind: -logKd/Ki=6.61, Kd=244nM
    23939 6njh:A (2.15) BS02 KRD 3.1.4.53 GO:0004114 ... Q08499 31013090 PDBbind: -logKd/Ki=3.69, IC50=203uM
    23940 6nji:A (2.45) BS02 KR4 3.1.4.53 GO:0004114 ... Q08499 31013090 PDBbind: -logKd/Ki=6.99, IC50=102nM
    23941 6njj:A (2.3) BS02 KR7 3.1.4.53 GO:0004114 ... Q08499 31013090 PDBbind: -logKd/Ki=5.99, IC50=1018nM
    BindingDB: IC50=127nM
    23942 6nlj:D (1.65) BS01 KTV 1.16.3.1 GO:0004322 ... Q9HY79 31038945 MOAD: Kd=15uM
    PDBbind: -logKd/Ki=4.82, Kd=15uM
    23943 6nm4:A (2.58) BS03 KS7 2.1.1.-
    2.1.1.354
    2.1.1.355
    2.1.1.359
    2.1.1.361
    2.1.1.362    		 GO:0042054 ... Q9NQV7 31848333 PDBbind: -logKd/Ki=7.06, Kd=87nM
    23944 6nm4:A (2.58) BS04 KS7 2.1.1.-
    2.1.1.354
    2.1.1.355
    2.1.1.359
    2.1.1.361
    2.1.1.362    		 GO:0042054 ... Q9NQV7 31848333 PDBbind: -logKd/Ki=7.06, Kd=87nM
    23945 6nmb:A (2.3) BS01 AMH 3.4.21.73 GO:0004252 ... P00749 30814058 MOAD: Ki=2.01mM
    PDBbind: -logKd/Ki=2.70, Ki=2.01mM
    BindingDB: Ki=2000000nM
    23946 6nng:A (2.397) BS03 DJ9 3.6.5.- GO:0000226 ... Q2XVP4 31043459 PDBbind: -logKd/Ki=4.23, Kd=59.4uM
    23947 6nng:B (2.397) BS02 DJ9 ? GO:0000226 ... P02554 31043459 PDBbind: -logKd/Ki=4.23, Kd=59.4uM
    23948 6nnr:A (1.05) BS01 UMC 2.1.1.45 GO:0000287 ... P0A884 23611499 PDBbind: -logKd/Ki=5.07, Kd=8.5uM
    23949 6nnr:A (1.05) BS02 UMC 2.1.1.45 GO:0000287 ... P0A884 23611499 PDBbind: -logKd/Ki=5.07, Kd=8.5uM
    23950 6nnr:B (1.05) BS01 UMC 2.1.1.45 GO:0000287 ... P0A884 23611499 PDBbind: -logKd/Ki=5.07, Kd=8.5uM
    23951 6nnr:B (1.05) BS02 UMC 2.1.1.45 GO:0000287 ... P0A884 23611499 PDBbind: -logKd/Ki=5.07, Kd=8.5uM
    23952 6no9:A (1.712) BS01 KUV 2.7.11.1 GO:0004672 ... P11309 30715878 MOAD: Ki=0.03nM
    PDBbind: -logKd/Ki=10.52, Ki=0.03nM
    BindingDB: Ki=0.030000nM
    23953 6noc:A (2.849) BS01 rna ? GO:0003723 ... Q09312 30652968 PDBbind: Kd=20.2nM
    23954 6nod:A (2.547) BS01 rna ? GO:0003723 ... Q09487 30652968 PDBbind: Kd=28.8nM
    23955 6nod:B (2.547) BS01 rna ? GO:0003723 ... Q09487 30652968 PDBbind: Kd=28.8nM
    23956 6nod:C (2.547) BS01 rna ? GO:0003723 ... Q09487 30652968 PDBbind: Kd=28.8nM
    23957 6nof:A (2.251) BS01 rna ? GO:0003723 ... Q09312 30652968 PDBbind: Kd=16.3nM
    23958 6noh:A (2.249) BS01 rna ? GO:0003723 ... Q09312 30652968 PDBbind: Kd=22.7nM
    23959 6np2:A (1.2) BS01 SIS 2.3.1.81 GO:0008080 ... Q47030 31515870 MOAD: Kd=0.16uM
    PDBbind: -logKd/Ki=6.80, Kd=0.16uM
    23960 6np3:A (1.15) BS01 LLL 2.3.1.81 GO:0008080 ... Q47030 31515870 MOAD: Kd=0.34uM
    PDBbind: -logKd/Ki=6.47, Kd=0.34uM
    23961 6np4:A (1.151) BS01 TOY 2.3.1.81 GO:0008080 ... Q47030 31515870 MOAD: Kd=36uM
    PDBbind: -logKd/Ki=4.44, Kd=36uM
    23962 6npe:A (2.15) BS02 KWD 2.7.10.2 GO:0004672 ... P00519 30689376 MOAD: ic50=0.00000001M
    PDBbind: -logKd/Ki=6.30, IC50=0.50uM
    BindingDB: IC50=1259nM, EC50=5012nM
    23963 6npf:D (2.57) BS01 KVM 4.2.1.11 GO:0000015 ... P0A6P9 31745118 PDBbind: -logKd/Ki=5.85, Ki=1.4uM
    23964 6npm:B (1.603) BS01 KVD 3.1.21.- GO:0003677 ... P03211 30842315 MOAD: Ki=110uM
    PDBbind: -logKd/Ki=3.96, IC50=110uM
    23965 6npp:B (1.35) BS01 KWG 3.1.21.- GO:0003677 ... P03211 30842315 MOAD: Ki=0.89uM
    PDBbind: -logKd/Ki=6.05, IC50=0.89uM
    23966 6npt:A (2.19) BS01 KWY 2.7.10.1 GO:0004672 ... P04629 31059222 MOAD: ic50=68.3pM
    PDBbind: -logKd/Ki=7.17, IC50=68.3nM
    23967 6npu:A (2.33) BS02 KWV 2.7.10.2 GO:0004672 ... P00519 30689376 MOAD: ic50=0.00000001M
    PDBbind: -logKd/Ki=6.40, IC50=0.40uM
    BindingDB: IC50=398nM, EC50=794nM
    23968 6npv:A (1.86) BS02 KWP 2.7.10.2 GO:0004672 ... P00519 30689376 MOAD: ic50=0.00000001M
    PDBbind: -logKd/Ki=6.80, IC50=0.16uM
    BindingDB: IC50=158nM, EC50=3162nM
    23969 6nrf:A (2.0) BS01 KYV 2.4.2.-
    2.4.2.30    		 GO:0003950 ... P09874 31042381 MOAD: ic50=18nM
    PDBbind: -logKd/Ki=7.74, IC50=18nM
    23970 6nrg:A (1.7) BS01 KYY 2.4.2.-
    2.4.2.30    		 GO:0003950 ... P09874 31042381 MOAD: ic50=56nM
    PDBbind: -logKd/Ki=7.25, IC50=56nM
    23971 6nrh:A (1.5) BS01 KYP 2.4.2.-
    2.4.2.30    		 GO:0003950 ... P09874 31042381 MOAD: ic50=55nM
    PDBbind: -logKd/Ki=7.26, IC50=55nM
    23972 6nri:A (2.2) BS01 KYM 2.4.2.-
    2.4.2.30    		 GO:0003950 ... P09874 31042381 MOAD: ic50=27nM
    PDBbind: -logKd/Ki=7.57, IC50=27nM
    BindingDB: IC50=27nM
    23973 6nrj:A (1.65) BS01 KYJ 2.4.2.-
    2.4.2.30    		 GO:0003950 ... P09874 31042381 MOAD: ic50=36nM
    PDBbind: -logKd/Ki=7.44, IC50=36nM
    BindingDB: IC50=36nM
    23974 6nsp:A (2.31) BS01 L0P 2.7.10.1 GO:0004672 ... P04629 31059222 MOAD: ic50=44.1pM
    PDBbind: -logKd/Ki=7.36, IC50=44.1nM
    23975 6nsq:B (3.05) BS01 KZP 2.7.11.1 GO:0004672 ... P15056 31312411 PDBbind: -logKd/Ki=8.10, IC50=8nM
    BindingDB: IC50=420nM
    23976 6nss:A (1.97) BS01 L0M 2.7.10.1 GO:0004672 ... P04629 31059222 MOAD: ic50=1.4nM
    PDBbind: -logKd/Ki=8.85, IC50=1.4nM
    23977 6nt2:A (2.48) BS02 KZS 2.1.1.319 GO:0001701 ... Q99873 31257072 PDBbind: -logKd/Ki=8.82, Ki=1.5nM
    23978 6nt2:D (2.48) BS02 KZS 2.1.1.319 GO:0001701 ... Q99873 31257072 PDBbind: -logKd/Ki=8.82, Ki=1.5nM
    23979 6ntb:A (1.9) BS01 ATP ? GO:0005524 ... B5II98 N/A PDBbind: -logKd/Ki=5.15, Kd=7.07uM
    23980 6ntb:A (1.9) BS02 ATP ? GO:0005524 ... B5II98 N/A PDBbind: -logKd/Ki=5.15, Kd=7.07uM
    23981 6ntb:C (1.9) BS01 ATP ? GO:0005524 ... B5II98 N/A PDBbind: -logKd/Ki=5.15, Kd=7.07uM
    23982 6ntb:C (1.9) BS02 ATP ? GO:0005524 ... B5II98 N/A PDBbind: -logKd/Ki=5.15, Kd=7.07uM
    23983 6ntj:A (1.9) BS01 LLL 2.3.1.81 GO:0016746 ... C4NV15 31515870 PDBbind: -logKd/Ki=6.47, Kd=0.34uM
    23984 6nu1:D (2.25) BS01 CYS 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 31386812 PDBbind: -logKd/Ki=4.51, Kd=31.2uM
    23985 6nu5:A (1.6) BS01 CYS 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 31386812 PDBbind: -logKd/Ki=5.15, Kd=7.04uM
    23986 6nv7:A (2.132) BS01 L3J 3.4.23.46 GO:0004190 ... P56817 31549827 MOAD: Ki=5nM
    PDBbind: -logKd/Ki=7.92, Kd=12.1nM
    23987 6nv9:A (2.13) BS01 L3M 3.4.23.46 GO:0004190 ... P56817 31549827 MOAD: Ki=7nM
    PDBbind: -logKd/Ki=8.19, Kd=6.4nM
    23988 6nvg:A (1.99) BS01 XL8 2.7.10.1 GO:0004672 ... P22455 31413803 PDBbind: -logKd/Ki=8.07, IC50=8.5nM
    23989 6nvh:A (1.9) BS01 XL6 2.7.10.1 GO:0004672 ... P22455 31413803 PDBbind: -logKd/Ki=7.95, IC50=11.1nM
    23990 6nvi:A (2.117) BS01 XL7 2.7.10.1 GO:0004672 ... P22455 31413803 PDBbind: -logKd/Ki=8.59, IC50=2.6nM
    23991 6nvj:A (2.3) BS01 XL5 2.7.10.1 GO:0004672 ... P22455 31413803 PDBbind: -logKd/Ki=8.28, IC50=5.3nM
    23992 6nvl:A (2.7) BS01 XL6 2.7.10.1 GO:0004672 ... P11362 31413803 PDBbind: -logKd/Ki=7.95, IC50=11.1nM
    23993 6nw3:A (2.352) BS01 L4J 3.4.23.46 GO:0004190 ... P56817 31549827 MOAD: Ki=21nM
    PDBbind: -logKd/Ki=7.66, Kd=22.1nM
    BindingDB: IC50=4nM
    23994 6nwc:A (2.35) BS01 L6P ? N/A Q8H1R0 31649167 MOAD: ic50=18nM
    PDBbind: -logKd/Ki=7.74, IC50=18nM
    23995 6nwk:A (1.65) BS02 DEX N/A N/A N/A 31391291 MOAD: Ki=20nM
    PDBbind: -logKd/Ki=7.70, Ki=20nM
    23996 6nwl:A (1.595) BS02 HCY N/A N/A N/A 31391291 MOAD: Ki=43nM
    PDBbind: -logKd/Ki=7.37, Ki=43nM
    23997 6nxz:A (1.75) BS01 D49 1.5.1.3 GO:0004146 ... P00383 31460098 MOAD: Ki=3.5uM
    PDBbind: -logKd/Ki=5.46, Ki=3.5uM
    23998 6ny0:A (1.4) BS01 LBA 1.5.1.3 GO:0004146 ... P00383 31460098 MOAD: Ki=4uM
    PDBbind: -logKd/Ki=5.40, Ki=4.0uM
    23999 6ny4:A (2.33) BS01 Z3A 2.7.10.2 GO:0004672 ... P52333 30891131 MOAD: ic50~3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3.0nM
    24000 6ny5:A (3.002) BS01 rna ? GO:0003723 ... O60059 31294800 PDBbind: Kd=50.1nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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