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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    23001 6gat:A (-1.00) BS02 dna ? GO:0003700 ... P17429 9533884 PDBbind: Kd=20uM
    23002 6gbm:B (-1.00) BS01 rna ? GO:0003676 ... P35637 30581145 PDBbind: Kd=84.0uM
    23003 6gbw:H (1.45) BS03 EU5 3.4.21.5 GO:0004252 ... P00734 31633354 MOAD: Ki=3.51nM
    PDBbind: -logKd/Ki=8.45, Ki=3.51nM
    BindingDB: Ki=3.5nM
    23004 6gbx:A (1.72) BS02 S77 2.3.2.5 GO:0005515 ... Q16769 30132075 MOAD: Ki=0.02uM
    PDBbind: -logKd/Ki=7.70, Ki=0.020uM
    BindingDB: IC50=17nM
    23005 6gc5:A (1.9) BS01 rna ? GO:0003676 ... Q15717 30718402 PDBbind: Kd=0.65uM
    23006 6gc5:B (1.9) BS01 rna ? GO:0003676 ... Q15717 30718402 PDBbind: Kd=0.65uM
    23007 6gc5:C (1.9) BS01 rna ? GO:0003676 ... Q15717 30718402 PDBbind: Kd=0.65uM
    23008 6gc5:D (1.9) BS01 rna ? GO:0003676 ... Q15717 30718402 PDBbind: Kd=0.65uM
    23009 6gch:G (2.1) BS02 APF 3.4.21.1 GO:0004252 ... P00766 2271520 PDBbind: -logKd/Ki=4.70, Ki=20uM
    23010 6gcl:A (1.95) BS02 EUE ? GO:0000166 ... O76290 30908048 MOAD: ic50=34.2uM
    PDBbind: -logKd/Ki=4.47, IC50=34.2uM
    23011 6gcl:D (1.95) BS02 EUE ? GO:0000166 ... O76290 30908048 MOAD: ic50=34.2uM
    PDBbind: -logKd/Ki=4.47, IC50=34.2uM
    23012 6gcr:A (2.3) BS01 EUW 2.7.10.2 GO:0004672 ... Q00944 29897729 PDBbind: -logKd/Ki=8.33, IC50=4.7nM
    23013 6gcw:A (2.0) BS01 EUQ 2.7.10.2 GO:0004672 ... Q00944 29897729 MOAD: ic50=4.7nM
    PDBbind: -logKd/Ki=8.64, IC50=2.3nM
    23014 6gcw:B (2.0) BS01 EUQ 2.7.10.2 GO:0004672 ... Q00944 29897729 MOAD: ic50=4.7nM
    PDBbind: -logKd/Ki=8.64, IC50=2.3nM
    23015 6gcx:A (1.553) BS01 EUW 2.7.10.2 GO:0004672 ... Q00944 29897729 MOAD: ic50=0.6nM
    PDBbind: -logKd/Ki=9.22, IC50=0.6nM
    23016 6gd3:B (1.35) BS01 rna ? GO:0003676 ... Q15717 30418581 PDBbind: Kd=155.8uM
    23017 6gd3:C (1.35) BS01 rna ? GO:0003676 ... Q15717 30418581 PDBbind: Kd=155.8uM
    23018 6gdg:A (4.11) BS01 NEC ? GO:0001609 ... P0AA25
    P29274    		 29726815 PDBbind: -logKd/Ki=8.74, Ki=1.8nM
    23019 6gdy:A (2.04) BS02 AKG 1.14.11.- N/A Q6NYC1 31147442 MOAD: Kd=3.5uM
    PDBbind: -logKd/Ki=5.46, Kd=3.5uM
    23020 6ge0:A (1.82) BS01 EVQ 2.7.11.24 GO:0000165 ... P28482 29775310 MOAD: ic50=2.1nM
    PDBbind: -logKd/Ki=8.68, IC50=2.1nM
    BindingDB: IC50=2.10nM
    23021 6ge7:A (2.3) BS01 EW8 ? GO:0005515 ... P02754 29879410 MOAD: Kd=0.867uM
    PDBbind: -logKd/Ki=6.06, Kd=0.867uM
    23022 6gev:A (1.54) BS02 EWN ? N/A P08235 30596500 MOAD: Ki=1.9nM
    PDBbind: -logKd/Ki=8.70, Ki=2.00nM
    BindingDB: IC50=63nM, Ki=2.0nM
    23023 6gf3:A (2.4) BS03 EX5 3.6.5.- GO:0000226 ... P81947 30006510 PDBbind: -logKd/Ki=4.84, Ki=14.3uM
    23024 6gf3:B (2.4) BS02 EX5 ? GO:0000226 ... Q6B856 30006510 PDBbind: -logKd/Ki=4.84, Ki=14.3uM
    23025 6gf9:A (2.1) BS01 X90 ? GO:0005515 ... P02754 29879410 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=6.39, Kd=0.411uM
    23026 6gfs:A (2.0) BS01 F15 ? GO:0005515 ... P02754 29879410 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=6.54, Kd=0.291uM
    23027 6gfy:C (2.7) BS01 EXH ? N/A P40337 29949369 PDBbind: -logKd/Ki=6.61, Kd=244nM
    23028 6gfz:C (2.3) BS01 EXE ? N/A P40337 29949369 MOAD: Kd=3080nM
    PDBbind: -logKd/Ki=5.51, Kd=3080nM
    23029 6gg3:A (3.72) BS01 ALA 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 29748232 PDBbind: -logKd/Ki=4.21, Ki=62uM
    23030 6gg4:A (2.46) BS01 PHE 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 29748232 PDBbind: -logKd/Ki=3.69, Ki=205uM
    23031 6gg5:A (3.2) BS01 TRP 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 29748232 PDBbind: -logKd/Ki=3.65, Ki=222uM
    23032 6gg8:A (1.8) BS02 EY8 ? N/A P08235 30596500 MOAD: Ki=0.79nM
    PDBbind: -logKd/Ki=9.10, Ki=0.79nM
    BindingDB: IC50=25nM, Ki=0.794328nM, EC50=0.050119nM
    23033 6gga:A (1.55) BS01 EY2 ? GO:0000976 ... P04637 31633398 PDBbind: -logKd/Ki=4.85, Kd=14.2uM
    23034 6ggb:A (1.32) BS02 EXQ ? GO:0000976 ... P04637 31633398 PDBbind: -logKd/Ki=5.39, Kd=4.1uM
    23035 6ggd:A (1.40001) BS02 EYB ? GO:0000976 ... P04637 31633398 PDBbind: -logKd/Ki=5.59, Kd=2.6uM
    23036 6gge:A (1.25001) BS02 EYE ? GO:0000976 ... P04637 31633398 PDBbind: -logKd/Ki=5.77, Kd=1.7uM
    23037 6ggf:A (1.32) BS02 EXQ ? GO:0000976 ... P04637 31633398 PDBbind: -logKd/Ki=5.39, Kd=4.1uM
    23038 6ggg:A (1.71) BS02 EYN ? N/A P08235 30596500 MOAD: Ki=0.63nM
    PDBbind: -logKd/Ki=9.20, Ki=0.63nM
    BindingDB: IC50=20nM, Ki=0.630957nM
    23039 6ggn:A (2.0) BS01 EYH 2.3.2.27 GO:0005634 ... Q00987 30217415 MOAD: ic50=0.08nM
    PDBbind: -logKd/Ki=10.10, IC50=0.08nM
    BindingDB: IC50=0.17nM
    23040 6ggv:A (2.69) BS01 ARG ? GO:0015276 ... Q9WZ62 29860047 PDBbind: -logKd/Ki=7.54, Kd=29nM
    23041 6gh9:A (2.09) BS02 MIX 3.4.19.12 GO:0004843 ... Q9Y4E8 30228188 PDBbind: -logKd/Ki=4.48, IC50=33uM
    23042 6ghh:A (1.9) BS01 TDA ? GO:0005515 ... P02754 29879410 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=6.71, Kd=0.193uM
    23043 6ghp:A (1.95) BS02 EZ5 ? GO:0000122 ... P31947 30025189 PDBbind: -logKd/Ki=9.36, Kd=0.44nM
    23044 6ghv:A (2.1) BS01 EZ8 ? N/A Q9NNX6 31469191 MOAD: Kd=52uM
    PDBbind: -logKd/Ki=4.28, Kd=52.0uM
    23045 6ghv:A (2.1) BS04 EZ8 ? N/A Q9NNX6 31469191 MOAD: Kd=52uM
    PDBbind: -logKd/Ki=4.28, Kd=52.0uM
    23046 6ghv:A (2.1) BS05 EZ8 ? N/A Q9NNX6 31469191 MOAD: Kd=52uM
    PDBbind: -logKd/Ki=4.28, Kd=52.0uM
    23047 6gi6:A (1.98) BS01 EZB 2.7.11.30 GO:0004672 ... Q04771 30085668 MOAD: ic50=0.194uM
    PDBbind: -logKd/Ki=6.71, IC50=0.194uM
    BindingDB: IC50=194nM
    23048 6gih:A (1.96) BS01 EZN 2.7.11.1 GO:0004672 ... P68400 29759799 PDBbind: -logKd/Ki=4.36, IC50=44uM
    BindingDB: IC50=44000nM
    23049 6gin:A (2.2) BS01 IR2 2.7.11.30 GO:0004672 ... Q04771 30085668 MOAD: ic50=0.032uM
    PDBbind: -logKd/Ki=7.49, IC50=0.032uM
    BindingDB: IC50=32nM, Kd=330nM
    23050 6gip:A (2.17) BS01 EUN 2.7.11.30 GO:0004672 ... Q04771 30085668 MOAD: ic50=0.042uM
    PDBbind: -logKd/Ki=7.38, IC50=0.042uM
    BindingDB: Kd=640nM, IC50=42nM
    23051 6gis:A (2.82) BS01 dna ? GO:0000122 ... P12004 28071730 PDBbind: Kd=0.7mM
    23052 6giu:A (1.39) BS03 L69 3.1.3.25
    3.1.3.94    		 GO:0000287 ... P29218 30289407 PDBbind: -logKd/Ki=6.66, IC50=0.22uM
    23053 6giu:B (1.39) BS03 L69 3.1.3.25
    3.1.3.94    		 GO:0000287 ... P29218 30289407 PDBbind: -logKd/Ki=6.66, IC50=0.22uM
    23054 6gj5:A (1.499) BS02 F0N 3.6.5.2 GO:0003924 ... P01116 31332011 MOAD: Kd=440uM
    PDBbind: -logKd/Ki=3.36, Kd=440uM
    23055 6gj6:A (1.761) BS02 EZZ 3.6.5.2 GO:0003924 ... P01116 31332011 MOAD: Kd=20.4uM
    PDBbind: -logKd/Ki=4.70, Kd=20uM
    23056 6gj7:A (1.67) BS02 F0B 3.6.5.2 GO:0003924 ... P01116 31332011 PDBbind: -logKd/Ki=6.06, IC50=0.87uM
    23057 6gj8:A (1.65) BS01 F0K 3.6.5.2 GO:0003924 ... P01116 31332011 PDBbind: -logKd/Ki=5.87, Kd=1.36uM
    23058 6gjb:A (1.82) BS01 F0H 2.7.11.24 GO:0000165 ... P28482 30568786 MOAD: ic50=0.008uM
    PDBbind: -logKd/Ki=8.10, IC50=8nM
    23059 6gjd:A (1.58) BS01 F0E 2.7.11.24 GO:0000165 ... P28482 30568786 MOAD: ic50=0.022uM
    PDBbind: -logKd/Ki=7.66, IC50=22nM
    23060 6gji:A (1.6) BS01 F1E 5.2.1.8 GO:0000413 ... P62937 30746096 PDBbind: -logKd/Ki=3.87, Kd=135uM
    23061 6gjj:A (1.38) BS01 L36 5.2.1.8 GO:0000413 ... P62937 30746096 PDBbind: -logKd/Ki=3.70, Kd=200uM
    23062 6gjl:A (1.16) BS01 F1Q 5.2.1.8 GO:0000413 ... P62937 30746096 PDBbind: -logKd/Ki=3.86, Kd=139uM
    23063 6gjm:A (1.354) BS01 L36 5.2.1.8 GO:0000413 ... P62937 30746096 PDBbind: -logKd/Ki=3.58, Kd=266uM
    23064 6gjn:A (1.7) BS01 F0Q 5.2.1.8 GO:0000413 ... P62937 30746096 PDBbind: -logKd/Ki=6.22, Kd=0.6uM
    23065 6gjr:A (1.69) BS01 F0W 5.2.1.8 GO:0000413 ... P62937 30746096 PDBbind: -logKd/Ki=3.74, Kd=184uM
    23066 6gjw:A (1.9) BS02 F2H 2.3.2.27 N/A P98170 31011505 PDBbind: -logKd/Ki=4.96, Kd=11uM
    23067 6gjw:D (1.9) BS02 F2H 2.3.2.27 N/A P98170 31011505 MOAD: Kd=9uM
    PDBbind: -logKd/Ki=4.96, Kd=11uM
    23068 6gjy:A (1.29) BS01 F1Z 5.2.1.8 GO:0000413 ... P62937 30746096 PDBbind: -logKd/Ki=3.00, Kd>1000uM
    23069 6gl3:A (2.77) BS01 EMW 2.7.1.67 GO:0016301 ... Q9UBF8 29952567 PDBbind: -logKd/Ki=7.96, IC50=11nM
    BindingDB: IC50=37nM
    23070 6gl8:A (1.4) BS01 F3Q ? GO:0042981 ... P10415
    Q07817    		 29732004 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=8.61, Kd=2.47nM
    23071 6gl9:A (1.7) BS01 F3W 2.7.10.2 GO:0004672 ... P52333 29852068 MOAD: ic50=135nM
    PDBbind: -logKd/Ki=6.87, Kd=135nM
    BindingDB: IC50=135nM
    23072 6gla:A (1.92) BS01 F4B 2.7.10.2 GO:0004672 ... P52333 29852068 MOAD: ic50=27nM
    PDBbind: -logKd/Ki=7.57, Kd=27nM
    BindingDB: IC50=0.210000nM, EC50=740nM
    23073 6glb:A (2.0) BS01 F48 2.7.10.2 GO:0004672 ... P52333 29852068 MOAD: ic50=129nM
    PDBbind: -logKd/Ki=6.89, Kd=129nM
    BindingDB: IC50=10.0nM
    23074 6gmd:A (1.66) BS01 A8Q 2.7.11.1 GO:0004672 ... P68400 29759799 PDBbind: -logKd/Ki=3.69, IC50=205uM
    23075 6gmq:I (2.755) BS01 F4K ? N/A P40337 30040896 PDBbind: -logKd/Ki=2.30, Kd=5.0mM
    23076 6gmx:B (2.533) BS01 F7B ? GO:0006511 ... Q15369 30040896 PDBbind: -logKd/Ki=2.17, Kd=6.7mM
    BindingDB: Kd=6.7nM
    23077 6gn1:B (2.6) BS01 F4N 2.7.11.1
    2.7.11.26    		 GO:0004672 ... P49841 29873877 PDBbind: -logKd/Ki=8.00, IC50=10nM
    BindingDB: IC50=10nM
    23078 6gnm:C (2.24) BS01 27M ? GO:0005179 ... Q9PTT3 30226982 MOAD: Kd=54.61uM
    PDBbind: -logKd/Ki=4.26, Kd=54.61uM
    23079 6gnm:D (2.24) BS01 27M ? GO:0005179 ... Q9PTT3 30226982 PDBbind: -logKd/Ki=4.26, Kd=54.61uM
    23080 6gnr:A (1.4) BS01 6J3 ? GO:0005179 ... Q9PTT3 30226982 MOAD: Kd=3.61uM
    PDBbind: -logKd/Ki=5.44, Kd=3.61uM
    23081 6gnr:B (1.4) BS01 6J3 ? GO:0005179 ... Q9PTT3 30226982 MOAD: Kd=3.61uM
    PDBbind: -logKd/Ki=5.44, Kd=3.61uM
    23082 6gnw:A (1.75) BS01 F52 ? GO:0005179 ... Q9PTT3 30226982 PDBbind: -logKd/Ki=4.99, Kd=10.20uM
    23083 6gnw:B (1.75) BS01 F52 ? GO:0005179 ... Q9PTT3 30226982 PDBbind: -logKd/Ki=4.99, Kd=10.20uM
    23084 6gnw:C (1.75) BS01 F52 ? GO:0005179 ... Q9PTT3 30226982 MOAD: Kd=10.2uM
    PDBbind: -logKd/Ki=4.99, Kd=10.20uM
    23085 6gnw:D (1.75) BS01 F52 ? GO:0005179 ... Q9PTT3 30226982 MOAD: Kd=10.2uM
    PDBbind: -logKd/Ki=4.99, Kd=10.20uM
    23086 6gon:A (1.65) BS01 8PF ? GO:0005179 ... Q9PTT3 30226982 MOAD: Kd=2.16uM
    PDBbind: -logKd/Ki=5.67, Kd=2.16uM
    23087 6gon:B (1.65) BS01 8PF ? GO:0005179 ... Q9PTT3 30226982 PDBbind: -logKd/Ki=5.67, Kd=2.16uM
    23088 6gon:C (1.65) BS01 8PF ? GO:0005179 ... Q9PTT3 30226982 PDBbind: -logKd/Ki=5.67, Kd=2.16uM
    23089 6gon:D (1.65) BS01 8PF ? GO:0005179 ... Q9PTT3 30226982 MOAD: Kd=2.16uM
    PDBbind: -logKd/Ki=5.67, Kd=2.16uM
    23090 6goo:A (1.8) BS01 8PF ? GO:0005179 ... Q9PTT3 30226982 MOAD: Kd=2.16uM
    PDBbind: -logKd/Ki=5.67, Kd=2.16uM
    23091 6goo:B (1.8) BS01 8PF ? GO:0005179 ... Q9PTT3 30226982 MOAD: Kd=2.16uM
    PDBbind: -logKd/Ki=5.67, Kd=2.16uM
    23092 6gop:H (2.9) BS01 F6K 3.4.25.1 GO:0004298 ... P25043 30029468 PDBbind: -logKd/Ki=9.15, IC50=0.7nM
    23093 6got:A (1.56) BS02 F6W 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 30253337 MOAD: Ki=0.4nM
    PDBbind: -logKd/Ki=9.40, Ki=0.4nM
    BindingDB: Kd=25nM
    23094 6gpb:A (2.86) BS04 H2P 2.4.1.1 GO:0000166 ... P00489 2106586 PDBbind: -logKd/Ki=4.85, Ki=14uM
    23095 6gqm:A (2.0) BS01 F8H 2.7.10.1 GO:0004672 ... P10721 30204441 PDBbind: -logKd/Ki=4.48, IC50>33.3uM
    23096 6gr7:A (1.4) BS01 F52 ? GO:0005179 ... P02766 30226982 MOAD: Kd=3.19uM
    PDBbind: -logKd/Ki=5.50, Kd=3.19uM
    23097 6gr7:B (1.4) BS01 F52 ? GO:0005179 ... P02766 30226982 MOAD: Kd=3.19uM
    PDBbind: -logKd/Ki=5.50, Kd=3.19uM
    23098 6grp:A (1.6) BS01 F4Z ? GO:0005179 ... P02766 30226982 MOAD: Kd=3.34uM
    PDBbind: -logKd/Ki=5.48, Kd=3.34uM
    23099 6grp:A (1.6) BS02 F4Z ? GO:0005179 ... P02766 30226982 MOAD: Kd=3.34uM
    PDBbind: -logKd/Ki=5.48, Kd=3.34uM
    23100 6grp:B (1.6) BS01 F4Z ? GO:0005179 ... P02766 30226982 MOAD: Kd=3.34uM
    PDBbind: -logKd/Ki=5.48, Kd=3.34uM
    23101 6grp:B (1.6) BS02 F4Z ? GO:0005179 ... P02766 30226982 MOAD: Kd=3.34uM
    PDBbind: -logKd/Ki=5.48, Kd=3.34uM
    23102 6gu2:A (2.0) BS01 F9Z 2.7.11.22
    2.7.11.23    		 GO:0000082 ... P06493 30472117 MOAD: Kd=1600nM
    PDBbind: -logKd/Ki=5.80, Kd=1600nM
    23103 6gu3:A (2.65) BS01 FB8 2.7.11.22
    2.7.11.23    		 GO:0000082 ... P06493 30472117 PDBbind: -logKd/Ki=5.36, Kd=4400nM
    BindingDB: IC50=62nM
    23104 6gu4:A (2.73) BS01 FC8 2.7.11.22
    2.7.11.23    		 GO:0000082 ... P06493 30472117 PDBbind: -logKd/Ki=4.70, Kd>20000nM
    BindingDB: IC50=31nM
    23105 6gu6:A (2.33) BS01 1QK 2.7.11.22
    2.7.11.23    		 GO:0000082 ... P06493 30472117 MOAD: Kd=1810nM
    PDBbind: -logKd/Ki=5.74, Kd=1810nM
    23106 6gu7:A (2.75) BS01 FB8 2.7.11.22
    2.7.11.23    		 GO:0000082 ... P06493 30472117 PDBbind: -logKd/Ki=5.81, Kd=1560nM
    BindingDB: IC50=62nM
    23107 6gub:A (2.52) BS01 F9Z 2.7.11.22 GO:0000082 ... P24941 30472117 PDBbind: -logKd/Ki=7.64, Kd=23nM
    23108 6guc:A (2.0) BS01 SU9 2.7.11.22 GO:0000082 ... P24941 30472117 MOAD: Kd=25nM
    PDBbind: -logKd/Ki=7.60, Kd=25nM
    BindingDB: IC50=22nM
    23109 6gue:A (1.99) BS01 FB8 2.7.11.22 GO:0000082 ... P24941 30472117 MOAD: Kd=4nM
    PDBbind: -logKd/Ki=8.40, Kd=4nM
    BindingDB: IC50=6nM
    23110 6guf:A (2.65) BS01 23D 2.7.11.22 GO:0000082 ... P24941 30472117 PDBbind: -logKd/Ki=6.65, Kd=224nM
    23111 6guh:A (1.5) BS01 FB8 2.7.11.22 GO:0000082 ... P24941 30472117 MOAD: Kd=26nM
    PDBbind: -logKd/Ki=7.59, Kd=26nM
    BindingDB: IC50=6nM
    23112 6guk:A (1.3) BS01 FC8 2.7.11.22 GO:0000082 ... P24941 30472117 MOAD: Kd=715nM
    PDBbind: -logKd/Ki=6.15, Kd=715nM
    BindingDB: IC50=26nM
    23113 6gva:A (2.15) BS01 FCQ 2.7.11.22 GO:0000082 ... P24941 30943029 MOAD: ic50=5nM
    PDBbind: -logKd/Ki=8.22, IC50=0.006uM
    23114 6gvf:A (2.5) BS01 FE5 2.7.11.1
    2.7.1.137
    2.7.1.153    		 GO:0016301 ... P42336 31749911 MOAD: Ki=28nM
    PDBbind: -logKd/Ki=7.55, Ki=28nM
    BindingDB: Kd=15nM, Ki=28nM
    23115 6gvg:A (3.0) BS01 FCZ 2.7.11.1
    2.7.1.137
    2.7.1.153    		 GO:0001525 ... P42336 31749911 PDBbind: -logKd/Ki=6.00, Ki=990nM
    BindingDB: Ki=990nM
    23116 6gvh:A (2.74) BS01 FDH 2.7.11.1
    2.7.1.137
    2.7.1.153    		 GO:0001525 ... P42336 31749911 PDBbind: -logKd/Ki=6.04, Ki=920nM
    BindingDB: Ki=920nM
    23117 6gvi:A (2.9) BS01 FDW 2.7.11.1
    2.7.1.137
    2.7.1.153    		 GO:0001525 ... P42336 31749911 PDBbind: -logKd/Ki=6.82, Ki=150nM
    BindingDB: Ki=150nM
    23118 6gvx:A (2.24) BS01 TAK 2.7.10.2
    2.7.11.1    		 GO:0004672 ... Q14680 31108049 MOAD: Ki=24nM
    PDBbind: -logKd/Ki=7.62, Ki=24nM
    23119 6gvz:A (1.54) BS01 CHO ? N/A J9XXB7 30355683 MOAD: Kd=0.4uM
    PDBbind: -logKd/Ki=6.40, Kd=0.4uM
    23120 6gw1:A (1.9) BS01 CHO ? N/A Q5F4T5 30355683 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=5.14, Kd=7.2uM
    23121 6gw4:A (2.295) BS01 CHO ? N/A A0ZNP3 30355683 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=5.92, Kd=1.2uM
    23122 6gwr:A (2.07) BS01 FEW 2.7.10.1 GO:0004672 ... Q08345 30075624 MOAD: Kd=7.9nM
    PDBbind: -logKd/Ki=8.10, Kd=7.9nM
    BindingDB: Kd=7.9nM, IC50=9.4nM
    23123 6gx3:A (2.1) BS02 FF2 3.5.1.98 GO:0000122 ... A5H660 29806110 MOAD: ic50=250nM
    PDBbind: -logKd/Ki=3.60, IC50=250uM
    23124 6gx3:A (2.1) BS03 FF2 3.5.1.98 GO:0000122 ... A5H660 29806110 MOAD: ic50=250nM
    PDBbind: -logKd/Ki=3.60, IC50=250uM
    23125 6gx6:A (2.0) BS01 rna ? GO:0003676 ... O00425 30135093 PDBbind: Kd=4.7uM
    23126 6gxa:A (2.1) BS02 TB8 3.5.1.98 GO:0000122 ... A5H660 29806110 MOAD: ic50=60nM
    PDBbind: -logKd/Ki=4.22, IC50=60uM
    23127 6gxb:A (1.35) BS02 FF5 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A PDBbind: -logKd/Ki=7.46, Ki=35nM
    23128 6gxe:A (1.3) BS02 FFH 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A PDBbind: -logKd/Ki=8.05, Ki=9nM
    23129 6gxe:A (1.3) BS03 FFH 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A PDBbind: -logKd/Ki=8.05, Ki=9nM
    23130 6gxg:A (1.6) BS01 FFN ? GO:0004791 ... O77404 30605929 PDBbind: -logKd/Ki=5.24, Kd=5.7uM
    23131 6gxq:A (1.96) BS02 FFZ 3.1.4.- GO:0004114 ... Q8WQX9 31378593 MOAD: Ki=0.00000079M
    PDBbind: -logKd/Ki=7.10, Kd=79.4nM
    BindingDB: Kd=79nM, Ki=158nM
    23132 6gxu:A (1.917) BS02 FG8 3.5.1.98 GO:0000122 ... A5H660 29806110 MOAD: ic50=180nM
    PDBbind: -logKd/Ki=3.74, IC50=180uM
    23133 6gxw:A (2.071) BS02 FGN 3.5.1.98 GO:0000122 ... A5H660 29806110 MOAD: ic50=440nM
    PDBbind: -logKd/Ki=3.36, IC50=440uM
    23134 6gxy:A (1.8) BS01 FFN ? GO:0004791 ... O77404 30605929 PDBbind: -logKd/Ki=5.24, Kd=5.7uM
    23135 6gxy:B (1.8) BS01 FFN ? GO:0004791 ... O77404 30605929 PDBbind: -logKd/Ki=5.24, Kd=5.7uM
    23136 6gy0:A (2.55) BS01 FGE 2.7.1.137
    2.7.1.153    		 GO:0001782 ... O35904 30718815 PDBbind: -logKd/Ki=7.32, Kd=47.9nM
    23137 6gy1:A (2.1) BS03 FGQ 2.1.1.6 GO:0000287 ... P22734 30272964 MOAD: ic50=0.501uM
    PDBbind: -logKd/Ki=6.30, IC50=0.50uM
    23138 6gz9:A (3.1) BS01 TXC N/A GO:0006857 ... N/A 30602453 PDBbind: -logKd/Ki=2.13, IC50=7.4mM
    23139 6gzd:A (2.28) BS02 LCI 2.7.11.1 GO:0000775 ... P48729 30146162 MOAD: Kd=9.8nM
    PDBbind: -logKd/Ki=8.01, Kd=9.8nM
    23140 6gzh:A (3.17) BS01 LCI 2.7.11.22
    2.7.11.23    		 GO:0004672 ... P50750 30146162 PDBbind: -logKd/Ki=8.27, Kd=5.4nM
    23141 6gzm:A (1.59) BS01 LCI 2.7.11.1
    2.7.11.26    		 GO:0004672 ... P48730 30146162 PDBbind: -logKd/Ki=8.26, Kd=5.5nM
    23142 6gzm:B (1.59) BS01 LCI 2.7.11.1
    2.7.11.26    		 GO:0004672 ... P48730 30146162 PDBbind: -logKd/Ki=8.26, Kd=5.5nM
    23143 6gzm:B (1.59) BS02 LCI 2.7.11.1
    2.7.11.26    		 GO:0004672 ... P48730 30146162 PDBbind: -logKd/Ki=8.26, Kd=5.5nM
    23144 6gzy:A (2.15) BS01 FHH 2.3.2.31 GO:0004842 ... Q96EP0 30657686 PDBbind: -logKd/Ki=3.40, Kd>400uM
    23145 6h0u:A (2.3) BS01 FKB 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 30548443 PDBbind: -logKd/Ki=6.77, IC50=0.17uM
    23146 6h12:A (2.2) BS01 FJK 3.1.1.7 GO:0001507 ... P04058 30798053 PDBbind: -logKd/Ki=7.68, Ki=20.8nM
    23147 6h13:B (2.8) BS01 FJN 3.1.1.7 GO:0001507 ... P04058 30798053 PDBbind: -logKd/Ki=7.23, Ki=58.6nM
    23148 6h14:B (1.86) BS01 FW8 3.1.1.7 GO:0001507 ... P04058 30798053 PDBbind: -logKd/Ki=7.86, Ki=13.7nM
    23149 6h1d:A (1.94) BS01 SAH 2.1.1.- GO:0003676 ... Q9Y5N5 31061526 PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    23150 6h1h:A (1.54) BS02 FJE 1.13.11.24 GO:0003712 ... O00625 30613326 PDBbind: -logKd/Ki=6.17, IC50=0.67uM
    23151 6h1i:A (1.69) BS02 FJH 1.13.11.24 GO:0003712 ... O00625 30613326 PDBbind: -logKd/Ki=7.36, IC50=0.044uM
    BindingDB: IC50=44nM, Kd=38nM
    23152 6h1u:A (1.68) BS01 ASP ? GO:0005576 ... P96257 30065086 MOAD: Kd=4.8uM
    PDBbind: -logKd/Ki=5.32, Kd=4.8uM
    23153 6h29:A (1.46) BS02 FK8 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 30140816 MOAD: Ki=2.4uM
    PDBbind: -logKd/Ki=5.62, Ki=2.4uM
    23154 6h2t:A (1.67) BS01 GLU ? GO:0005576 ... P96257 30065086 MOAD: Kd=15.2uM
    PDBbind: -logKd/Ki=4.82, Kd=15.2uM
    23155 6h2z:A (1.94) BS02 FKE 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 30530195 MOAD: Ki=0.5nM
    PDBbind: -logKd/Ki=9.30, Ki=0.5nM
    BindingDB: Ki=0.500000nM
    23156 6h33:A (1.58) BS02 FKQ 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 30530195 MOAD: Ki=0.6nM
    PDBbind: -logKd/Ki=9.22, Ki=0.6nM
    BindingDB: Ki=0.600000nM
    23157 6h34:A (1.55) BS02 FKK 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 30530195 MOAD: Ki=0.5nM
    PDBbind: -logKd/Ki=9.30, Ki=0.5nM
    BindingDB: Ki=0.500000nM
    23158 6h36:A (1.85) BS02 FKE 4.2.1.1 GO:0004089 ... P43166 30530195 MOAD: Ki=0.45nM
    PDBbind: -logKd/Ki=9.35, Ki=0.45nM
    BindingDB: Ki=0.450000nM
    23159 6h37:A (1.9) BS02 FKQ 4.2.1.1 GO:0004089 ... P43166 30530195 MOAD: Ki=2.6nM
    PDBbind: -logKd/Ki=8.59, Ki=2.6nM
    BindingDB: Ki=2.6nM
    23160 6h38:A (1.7) BS02 FKK 4.2.1.1 GO:0004089 ... P43166 30530195 MOAD: Ki=7.8nM
    PDBbind: -logKd/Ki=8.11, Ki=7.8nM
    BindingDB: Ki=7.8nM
    23161 6h3k:A (2.48) BS01 FMW 2.7.12.1 GO:0004672 ... P33981 30199249 MOAD: Ki=0.11mM
    PDBbind: -logKd/Ki=7.96, IC50=11nM
    BindingDB: IC50=3.00nM, Ki=0.110000nM
    23162 6h3q:A (1.31) BS02 FMH 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 30193219 MOAD: Ki=47.3nM
    PDBbind: -logKd/Ki=7.14, Ki=73.2nM
    BindingDB: Ki=73nM
    23163 6h4a:A (2.65) BS01 FNB 3.4.22.- GO:0004197 ... Q9UDY8 30692685 PDBbind: -logKd/Ki=7.38, Kd=42nM
    BindingDB: IC50=0.005nM
    23164 6h4d:A (2.9) BS02 GDP 3.6.1.- GO:0003924 ... Q9HUL3 31199072 PDBbind: -logKd/Ki=7.96, Kd=0.011uM
    23165 6h4o:A (2.25) BS03 FQH 1.14.11.66
    1.14.11.69    		 N/A O75164 31158747 MOAD: ic50=0.128uM
    PDBbind: -logKd/Ki=6.89, IC50=0.128uM
    BindingDB: IC50=128nM
    23166 6h4p:A (2.19) BS03 FQ5 1.14.11.66
    1.14.11.69    		 N/A O75164 31158747 MOAD: Ki=0.003uM
    PDBbind: -logKd/Ki=6.99, IC50=0.102uM
    BindingDB: IC50=102nM, EC50=8500nM, Ki=3.0nM
    23167 6h4q:A (2.31) BS03 FO2 1.14.11.66
    1.14.11.69    		 N/A O75164 31158747 MOAD: ic50=2.06uM
    PDBbind: -logKd/Ki=5.69, IC50=2.06uM
    BindingDB: IC50=2060nM
    23168 6h4r:A (2.14) BS03 FQB 1.14.11.66
    1.14.11.69    		 N/A O75164 31158747 MOAD: Ki=0.004nM
    PDBbind: -logKd/Ki=7.03, IC50=0.093uM
    BindingDB: Ki=4.0nM, IC50=93nM
    23169 6h4s:A (2.45) BS03 FQE 1.14.11.66
    1.14.11.69    		 N/A O75164 31158747 MOAD: Ki=0.002uM
    PDBbind: -logKd/Ki=7.42, IC50=0.038uM
    BindingDB: IC50=60nM, EC50=30300nM, Ki=2.0nM
    23170 6h4t:A (2.38) BS03 FOW 1.14.11.66
    1.14.11.69    		 N/A O75164 31158747 MOAD: Ki=0.004uM
    PDBbind: -logKd/Ki=7.00, IC50=0.100uM
    BindingDB: IC50=423nM, EC50=4700nM, Ki=4.0nM
    23171 6h4u:A (2.21) BS03 FO2 1.14.11.66
    1.14.11.69    		 N/A O75164 31158747 PDBbind: -logKd/Ki=6.16, IC50=0.693uM
    BindingDB: IC50=2060nM
    23172 6h4v:A (2.15) BS03 FQN 1.14.11.66
    1.14.11.69    		 N/A O75164 31158747 MOAD: ic50=0.613uM
    PDBbind: -logKd/Ki=6.21, IC50=0.613uM
    BindingDB: IC50=613nM
    23173 6h4w:A (2.81) BS03 FQQ 1.14.11.66
    1.14.11.69    		 N/A O75164 31158747 PDBbind: -logKd/Ki=6.97, IC50=0.107uM
    BindingDB: EC50=5900nM, IC50=107nM, Ki=5.0nM
    23174 6h4x:A (2.34) BS03 FNQ 1.14.11.66
    1.14.11.69    		 N/A O75164 31158747 MOAD: ic50=0.131uM
    PDBbind: -logKd/Ki=6.88, IC50=0.131uM
    BindingDB: IC50=131nM
    23175 6h4y:A (2.38) BS03 FO8 1.14.11.66
    1.14.11.69    		 N/A O75164 31158747 MOAD: ic50=0.077uM
    PDBbind: -logKd/Ki=7.11, IC50=0.077uM
    BindingDB: IC50=77nM
    23176 6h4z:A (2.3) BS05 FQ5 1.14.11.67 N/A Q9UGL1 31158747 MOAD: Ki=0.002uM
    PDBbind: -logKd/Ki=7.64, IC50=0.023uM
    BindingDB: EC50=600nM, Ki=2.0nM, IC50=23nM
    23177 6h4z:A (2.3) BS06 FQ5 1.14.11.67 N/A Q9UGL1 31158747 MOAD: Ki=0.002uM
    PDBbind: -logKd/Ki=7.64, IC50=0.023uM
    BindingDB: EC50=600nM, Ki=2.0nM, IC50=23nM
    23178 6h50:A (2.19) BS05 FO2 1.14.11.67 N/A Q9UGL1 31158747 MOAD: ic50=0.156uM
    PDBbind: -logKd/Ki=6.81, IC50=0.156uM
    BindingDB: IC50=156nM
    23179 6h51:A (2.21) BS05 FQK 1.14.11.67 N/A Q9UGL1 31158747 MOAD: Ki=0.016uM
    PDBbind: -logKd/Ki=6.87, IC50=0.134uM
    BindingDB: IC50=134nM, EC50=26400nM, Ki=16nM
    23180 6h52:A (2.14) BS05 FQN 1.14.11.67 N/A Q9UGL1 31158747 MOAD: ic50=0.068uM
    PDBbind: -logKd/Ki=7.17, IC50=0.068uM
    BindingDB: IC50=68nM
    23181 6h5w:A (1.37) BS03 FT8 3.4.15.1 GO:0006508 ... P12821 30372620 PDBbind: -logKd/Ki=10.80, Ki=0.016nM
    BindingDB: Ki=0.015000nM, IC50=0.100000nM
    23182 6h5w:A (1.37) BS04 FT8 3.4.15.1 GO:0006508 ... P12821 30372620 PDBbind: -logKd/Ki=10.80, Ki=0.016nM
    BindingDB: Ki=0.015000nM, IC50=0.100000nM
    23183 6h5w:A (1.37) BS05 FT8 3.4.15.1 GO:0006508 ... P12821 30372620 PDBbind: -logKd/Ki=10.80, Ki=0.016nM
    BindingDB: Ki=0.015000nM, IC50=0.100000nM
    23184 6h5x:A (1.8) BS03 FT8 3.4.15.1 GO:0006508 ... P12821 30372620 PDBbind: -logKd/Ki=10.82, Ki=0.015nM
    BindingDB: Ki=0.015000nM, IC50=0.100000nM
    23185 6h75:A (1.45) BS01 SLB ? GO:0030288 ... P44542 31518131 MOAD: Kd=42uM
    PDBbind: -logKd/Ki=4.38, Kd=42uM
    23186 6h76:A (1.5) BS01 SLB ? GO:0030288 ... P44542 31518131 MOAD: Kd=0.03uM
    PDBbind: -logKd/Ki=7.52, Kd=0.030uM
    23187 6h77:A (2.1) BS01 ATP ? GO:0008641 ... Q9GZZ9 30412706 PDBbind: -logKd/Ki=7.33, Kd=46.3nM
    23188 6h77:B (2.1) BS01 ATP ? GO:0008641 ... Q9GZZ9 30412706 PDBbind: -logKd/Ki=7.33, Kd=46.3nM
    23189 6h78:A (2.7) BS01 ATP ? GO:0008641 ... Q9GZZ9 30412706 PDBbind: -logKd/Ki=7.33, Kd=46.3nM
    23190 6h78:B (2.7) BS01 ATP ? GO:0008641 ... Q9GZZ9 30412706 PDBbind: -logKd/Ki=7.33, Kd=46.3nM
    23191 6h7d:A (2.4) BS01 BGC ? GO:0005354 ... Q9LT15 30679446 MOAD: Kd=3.2uM
    PDBbind: -logKd/Ki=5.49, Ki=3.2uM
    23192 6h7f:A (2.26) BS01 FV8 ? GO:0006826 ... Q76HJ9 30558715 PDBbind: -logKd/Ki=6.12, Kd=763nM
    23193 6h7j:A (2.8) BS01 5FW ? GO:0004930 ... P07700 31072904 PDBbind: -logKd/Ki=8.62, Ki=2.4nM
    23194 6h7l:A (2.7) BS05 Y00 ? GO:0004930 ... P07700 31072904 PDBbind: -logKd/Ki=8.97, Ki=1.07nM
    23195 6h7m:A (2.76) BS04 68H ? GO:0004930 ... P07700 31072904 PDBbind: -logKd/Ki=7.80, Ki=15.8nM
    23196 6h7n:A (2.5) BS01 FVK ? GO:0004930 ... P07700 N/A PDBbind: -logKd/Ki=8.46, Kd=3.5nM
    23197 6h7o:A (2.8) BS01 P32 ? GO:0004930 ... P07700 31072904 PDBbind: -logKd/Ki=9.85, Kd=0.14nM
    23198 6h7y:A (1.81) BS05 FVZ 3.4.17.21 GO:0004180 ... Q04609 30429952 MOAD: ic50=0.35nM
    PDBbind: -logKd/Ki=9.46, IC50=0.35nM
    BindingDB: IC50=0.350000nM
    23199 6h7z:A (2.0) BS04 FVW 3.4.17.21 GO:0004180 ... Q04609 30429952 MOAD: ic50=0.075nM
    PDBbind: -logKd/Ki=10.12, IC50=0.075nM
    BindingDB: IC50=0.075000nM
    23200 6h8q:A (3.631) BS01 dna ? GO:0000775 ... P40541 30109982 PDBbind: Kd=2.2uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218