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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    20801 5vfn:A (2.389) BS01 HCI ? GO:0004623 ... Q9IAT9 28751219 PDBbind: -logKd/Ki=3.52, Kd=300uM
    20802 5vfx:A (2.81) BS01 dna ? N/A Q1PLI2 30213934 PDBbind: Kd=360nM
    20803 5vfx:A (2.81) BS02 dna ? N/A Q1PLI2 30213934 PDBbind: Kd=360nM
    20804 5vfx:B (2.81) BS01 dna ? N/A Q1PLI2 30213934 PDBbind: Kd=360nM
    20805 5vfx:B (2.81) BS02 dna ? N/A Q1PLI2 30213934 PDBbind: Kd=360nM
    20806 5vfx:C (2.81) BS01 dna ? N/A Q1PLI2 30213934 PDBbind: Kd=360nM
    20807 5vfx:C (2.81) BS02 dna ? N/A Q1PLI2 30213934 PDBbind: Kd=360nM
    20808 5vfx:D (2.81) BS01 dna ? N/A Q1PLI2 30213934 PDBbind: Kd=360nM
    20809 5vfx:D (2.81) BS02 dna ? N/A Q1PLI2 30213934 PDBbind: Kd=360nM
    20810 5vfx:E (2.81) BS01 dna ? N/A Q1PLI2 30213934 PDBbind: Kd=360nM
    20811 5vfx:E (2.81) BS02 dna ? N/A Q1PLI2 30213934 PDBbind: Kd=360nM
    20812 5vfx:F (2.81) BS01 dna ? N/A Q1PLI2 30213934 PDBbind: Kd=360nM
    20813 5vfx:F (2.81) BS02 dna ? N/A Q1PLI2 30213934 PDBbind: Kd=360nM
    20814 5vfx:G (2.81) BS01 dna ? N/A Q1PLI2 30213934 PDBbind: Kd=360nM
    20815 5vfx:G (2.81) BS02 dna ? N/A Q1PLI2 30213934 PDBbind: Kd=360nM
    20816 5vfx:H (2.81) BS01 dna ? N/A Q1PLI2 30213934 PDBbind: Kd=360nM
    20817 5vfx:H (2.81) BS02 dna ? N/A Q1PLI2 30213934 PDBbind: Kd=360nM
    20818 5vgi:A (2.07) BS02 9DJ 1.14.11.66
    1.14.11.69    		 N/A O75164 28835804 PDBbind: -logKd/Ki=6.98, IC50=104nM
    BindingDB: IC50=104nM
    20819 5vgo:A (1.621) BS01 9B1 2.7.10.2 GO:0004672 ... Q06187 28626519 MOAD: Ki=1.28nM
    PDBbind: -logKd/Ki=8.70, IC50=0.002uM
    BindingDB: Ki=1.3nM, EC50=33nM, IC50=87nM
    20820 5vgy:A (1.39) BS02 9AA 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 28817930 MOAD: Kd=65.5uM
    PDBbind: -logKd/Ki=4.18, Kd=65.5uM
    BindingDB: Kd=43600nM
    20821 5vih:B (2.4) BS01 5DZ ? GO:0015276 ... Q00959 28760974 MOAD: Ki=32.2nM
    PDBbind: -logKd/Ki=7.49, Ki=32.2nM
    20822 5vii:B (1.951) BS01 5DY ? GO:0015276 ... Q00959 28760974 MOAD: Ki=51.8nM
    PDBbind: -logKd/Ki=7.29, Ki=51.8nM
    20823 5vij:B (2.105) BS01 5DX ? GO:0015276 ... Q00959 28760974 MOAD: Ki=24.3nM
    PDBbind: -logKd/Ki=7.61, Ki=24.3nM
    20824 5vil:A (2.64) BS01 9E1 2.7.11.25 GO:0004672 ... Q99683 29348070 PDBbind: -logKd/Ki=8.82, IC50=1.5nM
    BindingDB: IC50=736nM
    20825 5vio:A (2.84) BS01 9E4 2.7.11.25 GO:0004672 ... Q99683 29348070 PDBbind: -logKd/Ki=8.62, IC50=2.4nM
    BindingDB: IC50=272nM
    20826 5vja:A (2.46) BS01 DUK 2.7.11.1 GO:0004672 ... O43293 30033129 PDBbind: -logKd/Ki=6.59, Ki=0.260uM
    20827 5vjn:A (1.78) BS01 IR8 2.4.2.7 GO:0002055 ... P49435 29178779 MOAD: Ki=8.7uM
    PDBbind: -logKd/Ki=5.06, Ki=8.7uM
    20828 5vjn:B (1.78) BS01 IR8 2.4.2.7 GO:0002055 ... P49435 29178779 MOAD: Ki=8.7uM
    PDBbind: -logKd/Ki=5.06, Ki=8.7uM
    20829 5vjp:A (1.98) BS01 IR9 2.4.2.7 GO:0002055 ... P49435 29178779 MOAD: Ki=14.9uM
    PDBbind: -logKd/Ki=4.83, Ki=14.9uM
    20830 5vjp:B (1.98) BS01 IR9 2.4.2.7 GO:0002055 ... P49435 29178779 MOAD: Ki=14.9uM
    PDBbind: -logKd/Ki=4.83, Ki=14.9uM
    20831 5vkc:A (2.31) BS01 9EA ? GO:0042981 ... Q07820 25679114 PDBbind: -logKd/Ki=8.74, Ki=1.8nM
    BindingDB: Ki=98nM
    20832 5vkm:A (2.2) BS01 GAL ? N/A P20273 28970495 PDBbind: -logKd/Ki=3.55, Kd=281uM
    20833 5vkm:A (2.2) BS02 SIA ? N/A P20273 28970495 PDBbind: -logKd/Ki=3.55, Kd=281uM
    20834 5vl2:A (1.9) BS01 9EG N/A N/A N/A 30033524 MOAD: Kd=3.77nM
    PDBbind: -logKd/Ki=8.42, Kd=3.77nM
    20835 5vl2:C (1.9) BS01 9EG N/A N/A N/A 30033524 MOAD: Kd=3.77nM
    PDBbind: -logKd/Ki=8.42, Kd=3.77nM
    20836 5vlr:A (2.8) BS01 9EM 2.7.1.137
    2.7.1.153    		 GO:0001779 ... O00329 28541707 PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3.00nM
    20837 5vm0:B (1.79) BS01 9EG N/A N/A N/A 30033524 MOAD: Kd=1.6nM
    PDBbind: -logKd/Ki=8.80, Kd=1.60nM
    20838 5vm6:A (1.5) BS01 9EG N/A N/A N/A 30033524 MOAD: ic50=78nM
    PDBbind: -logKd/Ki=7.11, IC50=78nM
    20839 5vmu:A (2.346) BS01 dna ? N/A Q86T24 29546986 PDBbind: Kd=0.2nM
    20840 5vmu:A (2.346) BS02 dna ? N/A Q86T24 29546986 PDBbind: Kd=0.2nM
    20841 5vmv:A (2.313) BS01 dna ? N/A Q86T24 29546986 PDBbind: Kd=0.43nM
    20842 5vmv:A (2.313) BS02 dna ? N/A Q86T24 29546986 PDBbind: Kd=0.43nM
    20843 5vmz:A (2.319) BS01 dna ? N/A Q86T24 29546986 PDBbind: Kd=7.2nM
    20844 5vmz:A (2.319) BS02 dna ? N/A Q86T24 29546986 PDBbind: Kd=7.2nM
    20845 5vnd:A (2.2) BS01 9ES 2.7.10.1 GO:0004672 ... P11362 29247039 PDBbind: -logKd/Ki=6.49, IC50=320nM
    20846 5vo1:A (2.45) BS01 9FS 2.7.11.25 GO:0004672 ... Q12852 28929759 MOAD: Ki=0.007uM
    PDBbind: -logKd/Ki=8.15, Ki=0.007uM
    20847 5vo2:A (2.96) BS01 9FV 2.7.11.25 GO:0004672 ... Q12852 28929759 PDBbind: -logKd/Ki=6.81, Ki=0.154uM
    BindingDB: Ki=154nM, IC50=1900nM
    20848 5vo6:A (2.65) BS01 9J4 2.7.10.2 GO:0004672 ... P52333 28539220 PDBbind: -logKd/Ki=9.05, IC50=0.9nM
    BindingDB: IC50=0.900000nM
    20849 5voj:A (1.799) BS01 9H4 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0006508 ... P26664 28594175 MOAD: Ki=3.6nM
    PDBbind: -logKd/Ki=8.44, Ki=3.6nM
    20850 5vom:A (1.67) BS01 9GY ? N/A O60885 28835800 MOAD: ic50=0.79uM
    PDBbind: -logKd/Ki=6.10, IC50=0.79uM
    BindingDB: IC50=790nM
    20851 5vp0:A (2.2) BS02 9GJ 3.1.4.17 GO:0004114 ... O00408 28796496 MOAD: ic50=0.61nM
    PDBbind: -logKd/Ki=9.21, IC50=0.61nM
    BindingDB: IC50=0.610000nM
    20852 5vp1:A (1.86) BS02 9GA 3.1.4.17 GO:0004114 ... O00408 29093293 MOAD: ic50=0.51nM
    PDBbind: -logKd/Ki=9.29, IC50=0.51nM
    20853 5vp9:A (1.859) BS01 9H7 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0006508 ... P26664 28594175 MOAD: Ki=1.03nM
    PDBbind: -logKd/Ki=8.99, Ki=1.03nM
    20854 5vpm:A (2.9) BS01 9G7 3.4.23.15 GO:0004190 ... P00797 28985999 PDBbind: -logKd/Ki=8.80, IC50=1.6nM
    20855 5vqe:A (1.889) BS01 G2F ? GO:0004553 ... A0A2R2JFS5 29317495 PDBbind: -logKd/Ki=1.49, Kd=32mM
    20856 5vqq:A (2.55) BS01 9JP 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 28827354 PDBbind: -logKd/Ki=5.28, IC50=5.3uM
    20857 5vqr:A (2.55) BS01 9KG 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 28827354 PDBbind: -logKd/Ki=5.92, IC50=1.2uM
    20858 5vqs:A (2.504) BS01 9KD 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 28827354 MOAD: ic50=1.2uM
    PDBbind: -logKd/Ki=5.70, IC50=2.0uM
    20859 5vqt:A (2.556) BS01 9K7 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 28827354 PDBbind: -logKd/Ki=5.74, IC50=1.8uM
    20860 5vqu:A (2.6) BS01 9JP 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 28827354 PDBbind: -logKd/Ki=5.11, IC50=7.8uM
    20861 5vqv:A (2.58) BS01 9J1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 28827354 PDBbind: -logKd/Ki=6.40, IC50=0.4uM
    20862 5vqw:A (2.5) BS01 9KD 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 28827354 MOAD: ic50=0.4uM
    PDBbind: -logKd/Ki=5.70, IC50=2.0uM
    20863 5vqx:A (2.4) BS01 9HY 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 28827354 PDBbind: -logKd/Ki=6.32, IC50=0.48uM
    20864 5vqy:A (2.35) BS01 9J1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 28827354 PDBbind: -logKd/Ki=6.29, IC50=0.51uM
    20865 5vqz:A (2.23) BS01 9HY 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 28827354 PDBbind: -logKd/Ki=6.39, IC50=0.41uM
    20866 5vr8:A (1.999) BS01 UDX 1.1.1.22 GO:0001702 ... O60701 30420606 PDBbind: -logKd/Ki=6.87, Kd=0.135uM
    20867 5vr8:A (1.999) BS02 UDX 1.1.1.22 GO:0001702 ... O60701 30420606 PDBbind: -logKd/Ki=6.87, Kd=0.135uM
    20868 5vrl:A (2.65) BS01 9JA 1.3.1.9 GO:0004318 ... P9WGR1 30456352 PDBbind: -logKd/Ki=7.11, Kd=77nM
    20869 5vrp:A (3.22) BS01 9JD 3.4.23.15 GO:0004190 ... P00797 28985999 PDBbind: -logKd/Ki=8.89, IC50=1.3nM
    20870 5vrp:A (3.22) BS02 9JD 3.4.23.15 GO:0004190 ... P00797 28985999 PDBbind: -logKd/Ki=8.89, IC50=1.3nM
    20871 5vs6:A (2.27) BS01 9QD 3.4.19.12 GO:0004843 ... Q93009 29056421 MOAD: Kd=104nM
    PDBbind: -logKd/Ki=6.98, Kd=104nM
    BindingDB: IC50=90nM
    20872 5vsb:A (1.85) BS01 9QA 3.4.19.12 GO:0004843 ... Q93009 29056421 MOAD: Kd=7.614uM
    PDBbind: -logKd/Ki=5.12, Kd=7.614uM
    20873 5vsb:B (1.85) BS01 9QA 3.4.19.12 GO:0004843 ... Q93009 29056421 MOAD: Kd=7.614uM
    PDBbind: -logKd/Ki=5.12, Kd=7.614uM
    20874 5vsc:A (1.4) BS06 9HJ 2.1.1.-
    2.1.1.367    		 GO:0002039 ... Q96KQ7 28662962 MOAD: Kd=510nM
    PDBbind: -logKd/Ki=6.29, Kd=510nM
    BindingDB: Kd=510nM, IC50=295nM
    20875 5vsd:A (1.85) BS06 9HJ 2.1.1.-
    2.1.1.367    		 GO:0002039 ... Q9H9B1 28662962 MOAD: Kd=57nM
    PDBbind: -logKd/Ki=7.24, Kd=57nM
    BindingDB: Kd=57nM, IC50=5.0nM
    20876 5vse:A (1.6) BS06 9HG 2.1.1.-
    2.1.1.367    		 GO:0002039 ... Q96KQ7 28662962 MOAD: Kd=1070nM
    PDBbind: -logKd/Ki=5.97, Kd=1070nM
    BindingDB: IC50=259nM, Kd=1070nM
    20877 5vsf:A (1.7) BS06 9HG 2.1.1.-
    2.1.1.367    		 GO:0002039 ... Q9H9B1 28662962 MOAD: Kd=94nM
    PDBbind: -logKd/Ki=7.03, Kd=94nM
    BindingDB: IC50=4.0nM, Kd=94nM
    20878 5vsj:A (2.456) BS01 9HV 2.4.99.16 GO:0004553 ... Q9L1K2 28422240 PDBbind: -logKd/Ki=4.02, Ki=95uM
    20879 5vsk:A (3.33) BS01 9HS 3.4.19.12 GO:0004843 ... Q93009 29056421 PDBbind: -logKd/Ki=5.74, Kd=1.838uM
    20880 5vt1:A (1.9) BS01 9JS 2.7.11.17 GO:0004672 ... Q96RR4 29783765 PDBbind: -logKd/Ki=4.30, IC50>50uM
    20881 5vt4:A (3.205) BS01 9KJ 2.4.99.16 GO:0004553 ... Q9L1K2 28422240 PDBbind: -logKd/Ki=4.35, Ki=45uM
    20882 5vyy:A (1.792) BS01 9QY 3.6.4.10 GO:0005524 ... P07900 29528635 MOAD: Kd=0.62uM
    PDBbind: -logKd/Ki=6.21, Kd=0.62uM
    BindingDB: Kd=620nM, IC50=13200nM, Ki=1800nM
    20883 5w0e:A (1.41) BS01 9U4 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92793 29155580 MOAD: ic50=0.94nM
    PDBbind: -logKd/Ki=9.03, IC50=0.94nM
    BindingDB: EC50=6.6nM, IC50=17nM
    20884 5w0f:A (1.6) BS01 9U7 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92793 28892380 MOAD: ic50=16nM
    PDBbind: -logKd/Ki=7.80, IC50=16nM
    BindingDB: IC50=16nM
    20885 5w0i:A (1.43) BS01 9UA 2.3.1.-
    2.3.1.48    		 GO:0004402 ... P45481 28892380 MOAD: ic50=1.4nM
    PDBbind: -logKd/Ki=8.85, IC50=1.4nM
    20886 5w0l:A (1.549) BS01 9UD 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92793 28892380 MOAD: ic50=1.1nM
    PDBbind: -logKd/Ki=4.74, IC50=18uM
    BindingDB: EC50=14nM, IC50=12nM
    20887 5w0q:A (1.7) BS01 9UG 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92793 28892380 MOAD: ic50=18uM
    PDBbind: -logKd/Ki=8.00, IC50=10nM
    BindingDB: IC50=18000nM
    20888 5w10:A (2.15) BS01 CMP ? N/A Q72MQ6 28601495 MOAD: Kd=0.24uM
    PDBbind: -logKd/Ki=6.62, Kd=0.24uM
    20889 5w12:A (1.88) BS01 9TG 3.5.2.6 GO:0008800 ... Q6DRA1 29144725 PDBbind: -logKd/Ki=7.28, Ki=53nM
    20890 5w13:A (1.95) BS01 SM2 3.5.2.6 GO:0008800 ... Q6DRA1 29144725 PDBbind: -logKd/Ki=7.66, Ki=22nM
    20891 5w14:A (1.88) BS01 9TJ 3.5.2.6 GO:0008800 ... Q6DRA1 29144725 PDBbind: -logKd/Ki=7.34, Ki=46nM
    20892 5w19:A (2.1) BS01 9TD 4.1.99.1 GO:0006520 ... P28796 30082510 MOAD: Ki~5uM
    PDBbind: -logKd/Ki=5.30, Kd~5uM
    20893 5w19:B (2.1) BS01 9TD 4.1.99.1 GO:0006520 ... P28796 30082510 MOAD: Ki~5uM
    PDBbind: -logKd/Ki=5.30, Kd~5uM
    20894 5w2m:A (3.7) BS01 dna 3.5.4.38 GO:0003824 ... Q8IUX4 29191651 PDBbind: Kd=6.36uM
    20895 5w2m:B (3.7) BS01 dna 3.5.4.38 GO:0003824 ... Q8IUX4 29191651 PDBbind: Kd=6.36uM
    20896 5w2m:C (3.7) BS01 dna 3.5.4.38 GO:0003824 ... Q8IUX4 29191651 PDBbind: Kd=6.36uM
    20897 5w2m:D (3.7) BS01 dna 3.5.4.38 GO:0003824 ... Q8IUX4 29191651 PDBbind: Kd=6.36uM
    20898 5w2m:D (3.7) BS02 dna 3.5.4.38 GO:0003824 ... Q8IUX4 29191651 PDBbind: Kd=6.36uM
    20899 5w2m:J (3.7) BS01 dna 3.5.4.38 GO:0003824 ... Q8IUX4 29191651 PDBbind: Kd=6.36uM
    20900 5w2m:K (3.7) BS01 dna 3.5.4.38 GO:0003824 ... Q8IUX4 29191651 PDBbind: Kd=6.36uM
    20901 5w2m:L (3.7) BS01 dna 3.5.4.38 GO:0003824 ... Q8IUX4 29191651 PDBbind: Kd=6.36uM
    20902 5w2m:M (3.7) BS01 dna 3.5.4.38 GO:0003824 ... Q8IUX4 29191651 PDBbind: Kd=6.36uM
    20903 5w2m:M (3.7) BS02 dna 3.5.4.38 GO:0003824 ... Q8IUX4 29191651 PDBbind: Kd=6.36uM
    20904 5w2s:A (2.399) BS01 KMG 2.3.1.293 GO:0004315 ... P9WQD9 30563908 PDBbind: -logKd/Ki=7.33, Kd=46.5nM
    20905 5w34:A (2.95) BS01 dna 2.7.7.101 GO:0016779 ... P9WNW1 29558114 PDBbind: Kd=0.5uM
    20906 5w3i:A (1.95) BS03 GY5 3.1.-.- GO:0003723 ... C3W5S0 29215062 MOAD: Ki=1.6uM
    PDBbind: -logKd/Ki=5.80, Ki=1.6uM
    20907 5w44:A (2.1) BS02 GY6 3.1.-.- GO:0003723 ... C3W5S0 29215062 MOAD: Ki=0.36uM
    PDBbind: -logKd/Ki=6.44, Ki=0.36uM
    20908 5w4r:A (3.002) BS01 9WD ? GO:0003677 ... P51449 29079472 PDBbind: -logKd/Ki=7.48, Kd=33nM
    BindingDB: Kd=33nM, IC50=46nM
    20909 5w4v:A (2.65) BS01 9WA ? GO:0003677 ... P51449 29079472 PDBbind: -logKd/Ki=7.15, Kd=70nM
    BindingDB: Kd=5.0nM, IC50=89nM
    20910 5w4v:A (2.65) BS02 9WA ? GO:0003677 ... P51449 29079472 PDBbind: -logKd/Ki=7.15, Kd=70nM
    BindingDB: Kd=5.0nM, IC50=89nM
    20911 5w4v:B (2.65) BS01 9WA ? GO:0003677 ... P51449 29079472 PDBbind: -logKd/Ki=7.15, Kd=70nM
    BindingDB: Kd=5.0nM, IC50=89nM
    20912 5w4v:B (2.65) BS02 9WA ? GO:0003677 ... P51449 29079472 PDBbind: -logKd/Ki=7.15, Kd=70nM
    BindingDB: Kd=5.0nM, IC50=89nM
    20913 5w4w:A (1.99) BS01 9WG 2.7.11.1
    2.7.11.26    		 GO:0004672 ... P48730 28609096 MOAD: ic50=8nM
    PDBbind: -logKd/Ki=8.10, IC50=8nM
    BindingDB: IC50=13nM
    20914 5w5j:A (2.85) BS01 9WS 2.7.10.2
    2.7.11.1    		 GO:0004672 ... O43353 29057049 PDBbind: -logKd/Ki=5.82, IC50=1.5uM
    BindingDB: IC50=1500nM
    20915 5w5k:A (2.7) BS02 K70 ? N/A F8W4B7 30645113 PDBbind: -logKd/Ki=8.30, IC50=5nM
    20916 5w5o:A (2.89) BS01 9XA 2.7.10.2
    2.7.11.1    		 GO:0004672 ... O43353 29057049 PDBbind: -logKd/Ki=8.10, IC50=0.008uM
    BindingDB: IC50=8.0nM
    20917 5w5v:A (3.645) BS01 ANW 2.7.11.1 GO:0002218 ... Q9UHD2 30082428 PDBbind: -logKd/Ki=6.10, Kd=0.8uM
    BindingDB: IC50=851nM
    20918 5w6e:A (1.9) BS02 0NY 3.1.4.17 GO:0004114 ... Q01064 29718668 MOAD: ic50=9.1nM
    PDBbind: -logKd/Ki=8.04, IC50=9.1nM
    20919 5w6o:A (2.35) BS01 9X1 2.7.1.32
    2.7.1.82    		 N/A P35790 29389115 MOAD: ic50=520nM
    PDBbind: -logKd/Ki=6.28, IC50=520nM
    20920 5w6o:B (2.35) BS01 9X1 2.7.1.32
    2.7.1.82    		 N/A P35790 29389115 MOAD: ic50=520nM
    PDBbind: -logKd/Ki=6.28, IC50=520nM
    20921 5w73:A (2.202) BS03 GY9 3.1.-.- GO:0003723 ... C3W5S0 29215062 MOAD: Ki=0.5uM
    PDBbind: -logKd/Ki=6.30, Ki=0.5uM
    20922 5w7u:A (2.2) BS03 GY8 3.1.-.- GO:0003723 ... C3W5S0 29215062 MOAD: Ki=0.009uM
    PDBbind: -logKd/Ki=8.05, Ki=0.009uM
    20923 5w84:A (2.9) BS01 9YY 2.7.11.1 GO:0000287 ... Q9NWZ3 28947151 PDBbind: -logKd/Ki=6.44, IC50=360nM
    BindingDB: IC50=360nM
    20924 5w85:A (2.25) BS01 9YS 2.7.11.1 GO:0000287 ... Q9NWZ3 28947151 MOAD: ic50=10nM
    PDBbind: -logKd/Ki=8.00, IC50=10nM
    BindingDB: IC50=10.0nM
    20925 5w86:A (2.61) BS01 9YV 2.7.10.2 GO:0004672 ... P52333 28947151 PDBbind: -logKd/Ki=8.70, IC50=2nM
    BindingDB: IC50=2.0nM
    20926 5w88:A (-1.00) BS01 9XG ? GO:0005509 ... P19429
    P63316    		 27825981 PDBbind: -logKd/Ki=4.52, Kd=30uM
    20927 5w8h:A (1.8) BS01 9Y1 1.1.1.27 GO:0003824 ... P00338 29120638 MOAD: ic50=23.4uM
    PDBbind: -logKd/Ki=4.63, IC50=23.4uM
    BindingDB: IC50=23400nM
    20928 5w8h:A (1.8) BS02 9Y1 1.1.1.27 GO:0003824 ... P00338 29120638 MOAD: ic50=23.4uM
    PDBbind: -logKd/Ki=4.63, IC50=23.4uM
    BindingDB: IC50=23400nM
    20929 5w8h:B (1.8) BS01 9Y1 1.1.1.27 GO:0003824 ... P00338 29120638 MOAD: ic50=23.4uM
    PDBbind: -logKd/Ki=4.63, IC50=23.4uM
    BindingDB: IC50=23400nM
    20930 5w8i:A (1.95) BS01 9YD 1.1.1.27 GO:0003824 ... P00338 29120638 MOAD: ic50=0.15uM
    PDBbind: -logKd/Ki=6.82, IC50=0.150uM
    BindingDB: IC50=>57000nM
    20931 5w8j:A (1.55) BS01 9Y7 1.1.1.27 GO:0003824 ... P00338 29120638 MOAD: Kd=370nM
    PDBbind: -logKd/Ki=6.43, Kd=370nM
    BindingDB: IC50=>57000nM, EC50=3530nM, Kd=370nM
    20932 5w8j:A (1.55) BS02 9Y7 1.1.1.27 GO:0003824 ... P00338 29120638 MOAD: Kd=370nM
    PDBbind: -logKd/Ki=6.43, Kd=370nM
    BindingDB: IC50=>57000nM, EC50=3530nM, Kd=370nM
    20933 5w8j:B (1.55) BS01 9Y7 1.1.1.27 GO:0003824 ... P00338 29120638 MOAD: Kd=370nM
    PDBbind: -logKd/Ki=6.43, Kd=370nM
    BindingDB: IC50=>57000nM, EC50=3530nM, Kd=370nM
    20934 5w8v:A (2.346) BS01 9YP 2.4.2.8 GO:0000166 ... P00492 28813147 MOAD: Ki=0.006uM
    PDBbind: -logKd/Ki=8.22, Ki=6nM
    20935 5w92:A (2.3) BS03 KU0 3.1.-.- GO:0003723 ... C3W5S0 29215062 MOAD: Ki=0.02uM
    PDBbind: -logKd/Ki=7.70, Ki=0.02uM
    20936 5w99:A (1.59) BS01 A1V ? N/A U5Q3T2 29158402 PDBbind: -logKd/Ki=4.68, Kd=21uM
    20937 5w9g:A (2.1) BS03 KU2 3.1.-.- GO:0003723 ... C3W5S0 29215062 MOAD: Ki=0.15uM
    PDBbind: -logKd/Ki=6.82, Ki=0.15uM
    20938 5w9q:A (1.8) BS01 dna ? GO:0003677 ... Q9UIS9 29276034 PDBbind: Kd=0.6uM
    20939 5w9q:A (1.8) BS02 dna ? GO:0003677 ... Q9UIS9 29276034 PDBbind: Kd=0.6uM
    20940 5w9q:B (1.8) BS01 dna ? GO:0003677 ... Q9UIS9 29276034 PDBbind: Kd=0.6uM
    20941 5w9q:B (1.8) BS02 dna ? GO:0003677 ... Q9UIS9 29276034 PDBbind: Kd=0.6uM
    20942 5w9s:C (2.1) BS01 dna ? GO:0003677 ... Q7LFL8 29276034 PDBbind: Kd=0.1uM
    20943 5w9s:C (2.1) BS02 dna ? GO:0003677 ... Q7LFL8 29276034 PDBbind: Kd=0.1uM
    20944 5wa6:A (2.25) BS03 KU7 3.1.-.- GO:0003723 ... C3W5S0 29215062 PDBbind: -logKd/Ki=6.36, Ki=0.44uM
    20945 5wa7:A (2.204) BS03 KU4 3.1.-.- GO:0003723 ... C3W5S0 29215062 MOAD: Ki=0.4uM
    PDBbind: -logKd/Ki=6.40, Ki=0.4uM
    20946 5wa8:A (1.3) BS01 9ZA 3.4.22.-
    3.9.1.-    		 GO:0000118 ... P49773 28968488 MOAD: Kd=0.587uM
    PDBbind: -logKd/Ki=6.23, Kd=0.587uM
    20947 5wa9:A (1.15) BS01 9ZD 3.4.22.-
    3.9.1.-    		 GO:0000118 ... P49773 28968488 MOAD: Kd=0.175uM
    PDBbind: -logKd/Ki=6.76, Kd=0.175uM
    20948 5wac:A (2.061) BS01 A1M 3.5.2.6 GO:0008800 ... Q6DRA1 29144724 PDBbind: -logKd/Ki=7.42, Ki=38nM
    20949 5wad:A (2.09) BS01 QQZ 3.5.2.6 GO:0008800 ... Q6DRA1 29144724 PDBbind: -logKd/Ki=8.11, Ki=7.8nM
    20950 5wae:A (1.804) BS01 A1J 3.5.2.6 GO:0008800 ... Q6DRA1 29144724 PDBbind: -logKd/Ki=6.80, Ki=160nM
    20951 5waf:A (2.03) BS01 A0Y 3.5.2.6 GO:0008800 ... Q6DRA1 29144724 PDBbind: -logKd/Ki=9.35, Ki=0.45nM
    20952 5wag:B (1.931) BS01 A0V 3.5.2.6 GO:0008800 ... Q6DRA1 29144724 PDBbind: -logKd/Ki=5.21, Ki=6110nM
    20953 5wal:A (2.45) BS01 9ZS 2.7.10.2 GO:0004672 ... P29597 28830649 MOAD: Ki=0.0017uM
    PDBbind: -logKd/Ki=8.77, Ki=0.0017uM
    20954 5wap:A (2.201) BS03 KU9 3.1.-.- GO:0003723 ... C3W5S0 29215062 MOAD: Ki=0.3uM
    PDBbind: -logKd/Ki=6.52, Ki=0.3uM
    20955 5wb3:A (2.203) BS03 GYA 3.1.-.- GO:0003723 ... C3W5S0 29215062 MOAD: Ki=0.06uM
    PDBbind: -logKd/Ki=7.22, Ki=0.06uM
    20956 5wb6:A (2.35) BS01 9ZM 3.4.21.27 GO:0004252 ... P03951 28780160 MOAD: Ki=0.02nM
    PDBbind: -logKd/Ki=10.70, Ki=0.02nM
    BindingDB: Ki=0.020000nM
    20957 5wbm:A (2.16) BS01 A4G 2.7.1.3 GO:0004454 ... P50053 28853885 MOAD: Kd=20uM
    PDBbind: -logKd/Ki=4.70, Kd=20uM
    BindingDB: IC50=120226nM, Kd=20000nM
    20958 5wbm:B (2.16) BS01 A4G 2.7.1.3 GO:0004454 ... P50053 28853885 MOAD: Kd=20uM
    PDBbind: -logKd/Ki=4.70, Kd=20uM
    BindingDB: IC50=120226nM, Kd=20000nM
    20959 5wbm:B (2.16) BS02 A4G 2.7.1.3 GO:0004454 ... P50053 28853885 MOAD: Kd=20uM
    PDBbind: -logKd/Ki=4.70, Kd=20uM
    BindingDB: IC50=120226nM, Kd=20000nM
    20960 5wbo:A (2.25) BS01 A1Y 2.7.1.3 GO:0004454 ... P50053 28853885 MOAD: Kd=62uM
    PDBbind: -logKd/Ki=4.21, Kd=62uM
    BindingDB: Kd=62000nM, IC50=319000nM
    20961 5wbo:B (2.25) BS01 A1Y 2.7.1.3 GO:0004454 ... P50053 28853885 MOAD: Kd=62uM
    PDBbind: -logKd/Ki=4.21, Kd=62uM
    BindingDB: Kd=62000nM, IC50=319000nM
    20962 5wbp:A (2.74) BS01 A2J 2.7.1.3 GO:0004454 ... P50053 28853885 PDBbind: -logKd/Ki=4.36, Kd=44uM
    20963 5wbq:A (2.4) BS01 A3J 2.7.1.3 GO:0004454 ... P50053 28853885 MOAD: ic50=1.48uM
    PDBbind: -logKd/Ki=5.83, IC50=1.47uM
    BindingDB: IC50=1480nM
    20964 5wbq:B (2.4) BS01 A3J 2.7.1.3 GO:0004454 ... P50053 28853885 MOAD: ic50=1.48uM
    PDBbind: -logKd/Ki=5.83, IC50=1.47uM
    BindingDB: IC50=1480nM
    20965 5wbr:A (2.58) BS01 A3Y 2.7.1.3 GO:0004454 ... P50053 28853885 PDBbind: -logKd/Ki=4.77, IC50=16.79uM
    BindingDB: IC50=16790nM
    20966 5wbr:B (2.58) BS01 A3Y 2.7.1.3 GO:0004454 ... P50053 28853885 PDBbind: -logKd/Ki=4.77, IC50=16.79uM
    BindingDB: IC50=16790nM
    20967 5wbz:A (2.4) BS01 A4J 2.7.1.3 GO:0004454 ... P50053 28853885 MOAD: ic50=0.39uM
    PDBbind: -logKd/Ki=6.41, IC50=0.39uM
    BindingDB: IC50=450nM
    20968 5wbz:B (2.4) BS01 A4J 2.7.1.3 GO:0004454 ... P50053 28853885 MOAD: ic50=0.39uM
    PDBbind: -logKd/Ki=6.41, IC50=0.39uM
    BindingDB: IC50=450nM
    20969 5wcl:A (-1.00) BS01 9XG ? GO:0005509 ... P19429
    P63316    		 27825981 PDBbind: -logKd/Ki=4.52, Kd=30uM
    20970 5wcm:A (1.2) BS06 4NZ ? GO:0046872 ... Q89GW5 20696874 PDBbind: -logKd/Ki=4.00, Ki=100uM
    20971 5wdc:A (2.1) BS03 G2K 3.1.-.- GO:0003723 ... C3W5S0 29215062 MOAD: Ki=0.4uM
    PDBbind: -logKd/Ki=6.40, Ki=0.4uM
    20972 5wdj:B (2.4) BS01 AEY 1.11.2.2 GO:0004601 ... P05164 30108726 PDBbind: -logKd/Ki=6.96, IC50=0.11uM
    BindingDB: IC50=110nM
    20973 5wdl:A (2.625) BS01 R33 ? GO:0004177 ... A6LE66 30085657 PDBbind: -logKd/Ki=6.17, Ki=683nM
    20974 5wdw:A (2.3) BS03 8KU 3.1.-.- GO:0003723 ... C3W5S0 29215062 MOAD: Ki=0.29uM
    PDBbind: -logKd/Ki=6.54, Ki=0.29uM
    20975 5we9:A (1.804) BS03 GY7 3.1.-.- GO:0003723 ... C3W5S0 29215062 MOAD: Ki=0.06uM
    PDBbind: -logKd/Ki=7.22, Ki=0.06uM
    20976 5web:A (2.254) BS03 KU5 3.1.-.- GO:0003723 ... C3W5S0 29215062 MOAD: Ki=0.01uM
    PDBbind: -logKd/Ki=8.00, Ki=0.01uM
    20977 5wef:A (2.0) BS03 GY6 3.1.-.- GO:0003723 ... C3W5S0 29215062 MOAD: Ki=0.36uM
    PDBbind: -logKd/Ki=6.44, Ki=0.36uM
    20978 5wei:A (2.25) BS03 GY6 3.1.-.- GO:0003723 ... C3W5S0 29215062 MOAD: Ki=2uM
    PDBbind: -logKd/Ki=5.70, Ki=2uM
    20979 5wej:A (1.95) BS01 V45 2.7.7.48
    3.4.22.66
    3.6.1.15    		 GO:0004197 ... Q83883 29227928 PDBbind: -logKd/Ki=4.82, IC50=15.3uM
    20980 5wep:A (3.502) BS01 A81 ? GO:0016740 ... D7UQM0 30642934 PDBbind: -logKd/Ki=6.36, Kd=440nM
    20981 5wep:A (3.502) BS03 A81 ? GO:0016740 ... D7UQM0 30642934 PDBbind: -logKd/Ki=6.36, Kd=440nM
    20982 5wep:B (3.502) BS01 A81 ? GO:0016740 ... D7UQM0 30642934 PDBbind: -logKd/Ki=6.36, Kd=440nM
    20983 5wep:B (3.502) BS02 A81 ? GO:0016740 ... D7UQM0 30642934 PDBbind: -logKd/Ki=6.36, Kd=440nM
    20984 5wev:A (1.854) BS01 9ZS 2.7.10.2 GO:0004672 ... O60674 28830649 MOAD: Ki=0.15uM
    PDBbind: -logKd/Ki=6.82, Ki=0.15uM
    20985 5wew:A (3.178) BS02 A81 ? GO:0046872 ... W8UNW6 30642934 PDBbind: -logKd/Ki=6.74, Kd=180nM
    20986 5wew:A (3.178) BS03 A81 ? GO:0046872 ... W8UNW6 30642934 PDBbind: -logKd/Ki=6.74, Kd=180nM
    20987 5wew:B (3.178) BS01 A81 ? GO:0046872 ... W8UNW6 30642934 PDBbind: -logKd/Ki=6.74, Kd=180nM
    20988 5wew:B (3.178) BS03 A81 ? GO:0046872 ... W8UNW6 30642934 PDBbind: -logKd/Ki=6.74, Kd=180nM
    20989 5wex:A (1.26) BS02 8JS 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 28947945 MOAD: Ki=66.3nM
    PDBbind: -logKd/Ki=7.18, Ki=66.3nM
    BindingDB: Ki=14nM
    20990 5wf3:A (2.251) BS03 KU2 3.1.-.- GO:0003723 ... C3W5S0 29215062 MOAD: Ki=1.4uM
    PDBbind: -logKd/Ki=5.85, Ki=1.4uM
    20991 5wf5:A (2.6) BS01 UKA 3.2.1.17 GO:0003796 ... P00720
    P29274    		 29395784 PDBbind: -logKd/Ki=7.65, Ki=22.4nM
    20992 5wf6:A (2.9) BS01 UKA 3.2.1.17 GO:0003796 ... P00720
    P29274    		 29395784 PDBbind: -logKd/Ki=7.83, Ki=14.7nM
    20993 5wf7:B (2.5) BS09 A9G ? GO:0006338 ... G0RYC6
    G0SDW4    		 29904056 MOAD: ic50=98.5uM
    PDBbind: -logKd/Ki=4.01, IC50=98.5uM
    20994 5wfc:B (2.282) BS09 A97 ? GO:0006338 ... G0RYC6
    G0SDW4    		 29904056 MOAD: ic50=12.5uM
    PDBbind: -logKd/Ki=4.90, IC50=12.5uM
    20995 5wfd:B (2.654) BS09 A9G ? GO:0006338 ... G0RYC6
    G0SDW4    		 29904056 PDBbind: -logKd/Ki=4.58, IC50=26.2uM
    20996 5wfj:A (2.48) BS01 9Z4 2.7.10.2 GO:0004672 ... P52333 28927786 PDBbind: -logKd/Ki=8.89, IC50=1.3nM
    20997 5wfm:A (2.251) BS03 KU5 3.1.-.- GO:0003723 ... C3W5S0 29215062 MOAD: Ki=0.3uM
    PDBbind: -logKd/Ki=6.52, Ki=0.3uM
    20998 5wfw:A (2.292) BS03 GYA 3.1.-.- GO:0003723 ... C3W5S0 29215062 MOAD: Ki=0.8uM
    PDBbind: -logKd/Ki=6.10, Ki=0.8uM
    20999 5wfz:A (2.35) BS03 KU0 3.1.-.- GO:0003723 ... C3W5S0 29215062 MOAD: Ki<0.01uM
    PDBbind: -logKd/Ki=8.00, Ki<0.01uM
    21000 5wg3:A (2.896) BS01 AFM 2.7.11.15 GO:0001664 ... P25098 29070696 PDBbind: -logKd/Ki=8.10, IC50=0.008uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218