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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM DMFold SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    19801 5nkc:A (1.448) BS01 90T 2.7.10.1 GO:0004672 ... P29317 28544567 MOAD: Kd=18.62nM
    PDBbind: -logKd/Ki=7.72, Kd=19nM
    19802 5nkd:A (1.408) BS01 91K 2.7.10.1 GO:0004672 ... P29317 28544567 MOAD: Kd=26.3nM
    PDBbind: -logKd/Ki=7.59, Kd=26nM
    19803 5nkg:A (1.1) BS01 8ZK 2.7.10.1 GO:0004672 ... P29317 28544567 MOAD: Kd=20.89nM
    PDBbind: -logKd/Ki=7.68, Kd=21nM
    19804 5nkh:A (1.29) BS01 8ZQ 2.7.10.1 GO:0004672 ... P29317 28544567 MOAD: Kd=25.7nM
    PDBbind: -logKd/Ki=7.59, Kd=26nM
    19805 5nki:A (1.675) BS01 8ZW 2.7.10.1 GO:0004672 ... P29317 28544567 MOAD: Kd=18.62nM
    PDBbind: -logKd/Ki=7.72, Kd=19nM
    19806 5nkk:F (2.64) BS01 GDP ? GO:0000184 ... Q9XWJ1 28389433 PDBbind: -logKd/Ki=5.00, Kd=10uM
    19807 5nkn:A (2.2) BS01 LOC ? GO:0005506 ... P80188 30517073 MOAD: Kd=120pM
    PDBbind: -logKd/Ki=9.92, Kd=120pM
    19808 5nlk:A (1.8) BS01 92E 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q92793 29532017 MOAD: Kd=0.035uM
    PDBbind: -logKd/Ki=7.46, Kd=0.035uM
    BindingDB: Kd=35nM, IC50=19nM
    19809 5nn0:A (2.1) BS03 92H 3.1.1.8 GO:0001540 ... P06276 29227101 MOAD: Kd=11.1pM
    PDBbind: -logKd/Ki=10.96, Kd=11pM
    BindingDB: IC50=1.0nM
    19810 5nn0:A (2.1) BS04 92H 3.1.1.8 GO:0001540 ... P06276 29227101 MOAD: Kd=11.1pM
    PDBbind: -logKd/Ki=10.96, Kd=11pM
    BindingDB: IC50=1.0nM
    19811 5nn4:A (1.83) BS01 SC2 3.2.1.20 GO:0000023 ... P10253 29061980 MOAD: Kd=11.57mM
    PDBbind: -logKd/Ki=1.94, Kd=11.57mM
    19812 5nn4:A (1.83) BS02 SC2 3.2.1.20 GO:0000023 ... P10253 29061980 MOAD: Kd=11.57mM
    PDBbind: -logKd/Ki=1.94, Kd=11.57mM
    19813 5nn5:A (2.0) BS01 NOJ 3.2.1.20 GO:0000023 ... P10253 29061980 MOAD: Ki=3.4uM
    PDBbind: -logKd/Ki=5.47, Ki=3.4uM
    19814 5nn6:A (2.0) BS01 MIG 3.2.1.20 GO:0000023 ... P10253 29061980 MOAD: Ki=3uM
    PDBbind: -logKd/Ki=5.52, Kd=3.0uM
    BindingDB: IC50=2000nM
    19815 5nob:A (1.85) BS01 92T 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29155568 MOAD: ic50=0.0063uM
    PDBbind: -logKd/Ki=8.20, IC50=0.0063uM
    BindingDB: IC50=6.3nM
    19816 5npb:A (1.9) BS03 93Z 2.4.1.161 GO:0003824 ... B3PEE6 28776021 PDBbind: -logKd/Ki=7.09, IC50=82nM
    19817 5npc:A (1.96) BS06 94E 2.4.1.161 GO:0003824 ... B3PEE6 28776021 PDBbind: -logKd/Ki=4.00, IC50>100uM
    19818 5npd:A (1.95) BS05 94B 2.4.1.161 GO:0003824 ... B3PEE6 28776021 PDBbind: -logKd/Ki=7.42, IC50=38nM
    19819 5npe:A (1.95) BS04 948 2.4.1.161 GO:0003824 ... B3PEE6 28776021 PDBbind: -logKd/Ki=4.00, IC50>100uM
    19820 5npf:A (1.38) BS02 945 3.2.1.45 GO:0004348 ... F6BL85 28776021 PDBbind: -logKd/Ki=4.24, IC50=58uM
    19821 5npr:A (1.85) BS02 94T 2.4.1.255 N/A O15294 29723473 PDBbind: -logKd/Ki=4.90, Ki=12.5uM
    19822 5nps:A (1.68) BS02 94T 2.4.1.255 N/A O15294 29723473 PDBbind: -logKd/Ki=5.89, Ki=1.3uM
    19823 5nq5:A (2.85) BS01 952 2.7.4.9 GO:0000287 ... P9WKE1 29510037 PDBbind: -logKd/Ki=5.00, IC50=10uM
    19824 5nqe:A (2.71) BS01 94Z 2.4.2.- GO:0003950 ... Q460N5 28495083 PDBbind: -logKd/Ki=6.15, IC50=0.70uM
    19825 5nqr:A (2.2) BS01 958 2.7.7.96
    3.6.1.13
    3.6.1.58
    GO:0000287 ... Q9UKK9 29343827 MOAD: ic50=70nM
    PDBbind: -logKd/Ki=7.15, IC50=70nM
    19826 5nqr:A (2.2) BS02 958 2.7.7.96
    3.6.1.13
    3.6.1.58
    GO:0000287 ... Q9UKK9 29343827 MOAD: ic50=70nM
    PDBbind: -logKd/Ki=7.15, IC50=70nM
    19827 5nqr:A (2.2) BS03 958 2.7.7.96
    3.6.1.13
    3.6.1.58
    GO:0000287 ... Q9UKK9 29343827 MOAD: ic50=70nM
    PDBbind: -logKd/Ki=7.15, IC50=70nM
    19828 5nqr:B (2.2) BS01 958 2.7.7.96
    3.6.1.13
    3.6.1.58
    GO:0000287 ... Q9UKK9 29343827 PDBbind: -logKd/Ki=7.15, IC50=70nM
    19829 5nqr:B (2.2) BS02 958 2.7.7.96
    3.6.1.13
    3.6.1.58
    GO:0000287 ... Q9UKK9 29343827 PDBbind: -logKd/Ki=7.15, IC50=70nM
    19830 5nqr:B (2.2) BS03 958 2.7.7.96
    3.6.1.13
    3.6.1.58
    GO:0000287 ... Q9UKK9 29343827 PDBbind: -logKd/Ki=7.15, IC50=70nM
    19831 5nr7:A (2.35) BS01 YUI 2.7.4.9 GO:0000287 ... P9WKE1 29510037 MOAD: ic50=0.95uM
    PDBbind: -logKd/Ki=6.02, IC50=0.95uM
    19832 5nr8:A (1.349) BS01 95N 3.2.1.14 GO:0004553 ... Q13231 29283260 MOAD: ic50=175nM
    PDBbind: -logKd/Ki=6.76, IC50=175nM
    BindingDB: IC50=175nM
    19833 5nra:A (1.267) BS01 95K 3.2.1.14 GO:0004553 ... Q13231 29283260 MOAD: ic50=123nM
    PDBbind: -logKd/Ki=6.91, IC50=123nM
    19834 5nrf:A (1.447) BS01 95Q 3.2.1.14 GO:0004553 ... Q13231 29283260 MOAD: ic50=163nM
    PDBbind: -logKd/Ki=6.79, IC50=163nM
    BindingDB: IC50=163nM
    19835 5nsp:B (2.3) BS02 97E 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29155568 MOAD: ic50=0.34uM
    PDBbind: -logKd/Ki=6.47, IC50=0.34uM
    BindingDB: IC50=>10000nM
    19836 5nsx:A (1.8) BS02 97K 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29374194 MOAD: ic50=400nM
    PDBbind: -logKd/Ki=6.40, IC50=400nM
    19837 5nt0:A (1.75) BS02 97H 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29374194 MOAD: ic50=280nM
    PDBbind: -logKd/Ki=6.55, IC50=280nM
    19838 5nt4:A (1.9) BS02 97Z 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29374194 MOAD: ic50=17nM
    PDBbind: -logKd/Ki=7.77, IC50=17nM
    19839 5ntk:A (1.9) BS01 99N ? GO:0003677 ... P51449 28590087 MOAD: ic50=9.7nM
    PDBbind: -logKd/Ki=8.01, IC50=9.7nM
    19840 5ntp:A (1.7) BS01 98E ? GO:0003677 ... P51449 28590087 MOAD: ic50=0.7nM
    PDBbind: -logKd/Ki=9.15, IC50=0.7nM
    19841 5ntq:A (2.26) BS01 444 ? GO:0003677 ... P51449 28590087 MOAD: ic50=33.8nM
    PDBbind: -logKd/Ki=7.47, IC50=33.8nM
    BindingDB: IC50=60nM, EC50=54nM, Ki=51nM
    19842 5ntt:A (2.75) BS01 SVE 2.7.12.1 GO:0004672 ... P33981 28726638 PDBbind: -logKd/Ki=5.75, Kd=1764nM
    BindingDB: IC50=182nM
    19843 5ntw:A (1.64) BS03 98N ? GO:0003677 ... P51449 28590087 MOAD: ic50=0.6nM
    PDBbind: -logKd/Ki=9.22, IC50=0.6nM
    BindingDB: IC50=<100nM, Ki=<100nM
    19844 5nu1:A (1.85) BS02 8YB ? GO:0003677 ... P51449 28590087 MOAD: ic50=1nM
    PDBbind: -logKd/Ki=9.00, IC50=1nM
    BindingDB: IC50=10.0nM, EC50=8.0nM, Ki=40nM
    19845 5nu3:A (1.75) BS01 99E 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q92793 28766825 MOAD: Kd=0.23uM
    PDBbind: -logKd/Ki=6.64, Kd=0.23uM
    19846 5nu5:A (1.6) BS01 99E 2.3.1.-
    2.3.1.48
    GO:0004402 ... Q09472 28766825 MOAD: Kd=0.47uM
    PDBbind: -logKd/Ki=6.33, Kd=0.47uM
    19847 5nud:A (2.5) BS01 99K 2.7.10.1 GO:0004672 ... P22455 30108871 PDBbind: -logKd/Ki=7.49, Kd=32nM
    19848 5nut:A (1.6) BS02 9A8 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29374194 MOAD: ic50=12nM
    PDBbind: -logKd/Ki=7.92, IC50=12nM
    19849 5nvc:A (1.6) BS02 9AN 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29374194 MOAD: ic50=650nM
    PDBbind: -logKd/Ki=6.19, IC50=650nM
    19850 5nve:A (1.5) BS02 9AQ 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29374194 MOAD: ic50=35nM
    PDBbind: -logKd/Ki=7.46, IC50=35nM
    19851 5nvf:A (1.55) BS02 9AW 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29374194 MOAD: ic50=16nM
    PDBbind: -logKd/Ki=7.80, IC50=16nM
    19852 5nvh:A (1.6) BS02 9B2 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29374194 MOAD: ic50=15nM
    PDBbind: -logKd/Ki=7.82, IC50=15nM
    19853 5nvv:C (2.1) BS01 9BT ? N/A P40337 28853884 MOAD: Kd=105nM
    PDBbind: -logKd/Ki=6.70, Kd=200nM
    19854 5nvw:C (2.2) BS01 9BW ? N/A P40337 28853884 MOAD: Kd=132nM
    PDBbind: -logKd/Ki=6.77, Kd=170nM
    19855 5nvx:C (2.2) BS01 4YY ? N/A P40337 28853884 MOAD: Kd=44nM
    PDBbind: -logKd/Ki=7.05, Kd=90nM
    19856 5nvy:C (2.9) BS01 9B5 ? N/A P40337 28853884 PDBbind: -logKd/Ki=6.12, Kd=760nM
    BindingDB: IC50=21200nM
    19857 5nvz:C (2.7) BS01 9BN ? N/A P40337 28853884 PDBbind: -logKd/Ki=6.77, Kd=170nM
    19858 5nw0:C (2.3) BS01 9BK ? N/A P40337 28853884 MOAD: Kd=128nM
    PDBbind: -logKd/Ki=6.52, Kd=300nM
    19859 5nw1:C (2.1) BS01 9BH ? N/A P40337 28853884 MOAD: Kd=210nM
    PDBbind: -logKd/Ki=6.60, Kd=250nM
    19860 5nw2:C (2.2) BS01 9B8 ? N/A P40337 28853884 MOAD: Kd=232nM
    PDBbind: -logKd/Ki=6.49, Kd=320nM
    19861 5nw5:A (6.502) BS01 dna ? N/A P29539 28604726 PDBbind: Kd=21nM
    19862 5nw5:B (6.502) BS01 dna ? N/A P29539 28604726 PDBbind: Kd=21nM
    19863 5nw7:A (1.85) BS02 9C2 5.3.1.8 GO:0000032 ... P34948 29687459 MOAD: Ki=1.7uM
    PDBbind: -logKd/Ki=5.77, Ki=1.7uM
    19864 5nwb:A (1.6) BS02 9C5 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29374194 MOAD: ic50=16nM
    PDBbind: -logKd/Ki=7.80, IC50=16nM
    19865 5nwc:A (1.5) BS02 9CE 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29374194 MOAD: ic50=700nM
    PDBbind: -logKd/Ki=6.15, IC50=700nM
    19866 5nwd:A (1.45) BS01 9C8 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29374194 MOAD: ic50=10nM
    PDBbind: -logKd/Ki=8.00, IC50=10nM
    19867 5nwe:A (2.0) BS03 G39 3.2.1.18 GO:0004308 ... C3W6G3 29933553 MOAD: Kd=13200nM
    PDBbind: -logKd/Ki=4.88, Kd=13200nM
    19868 5nwg:A (1.4) BS02 9CB 2.4.2.-
    2.4.2.30
    GO:0003950 ... Q9H2K2 29374194 MOAD: ic50=660nM
    PDBbind: -logKd/Ki=6.18, IC50=660nM
    19869 5nwh:A (2.6) BS01 9CH 2.7.7.96
    3.6.1.13
    3.6.1.58
    GO:0000287 ... Q9UKK9 29343827 PDBbind: -logKd/Ki=7.54, IC50=29nM
    19870 5nwh:A (2.6) BS02 9CH 2.7.7.96
    3.6.1.13
    3.6.1.58
    GO:0000287 ... Q9UKK9 29343827 PDBbind: -logKd/Ki=7.54, IC50=29nM
    19871 5nwh:B (2.6) BS01 9CH 2.7.7.96
    3.6.1.13
    3.6.1.58
    GO:0000287 ... Q9UKK9 29343827 PDBbind: -logKd/Ki=7.54, IC50=29nM
    19872 5nwz:A (2.37) BS01 9CT 2.7.10.1 GO:0004672 ... P22455 30108871 PDBbind: -logKd/Ki=9.10, Kd=0.8nM
    19873 5nx9:A (2.3) BS01 AMP 4.3.2.2 GO:0000166 ... A0A384E0N4 30573755 PDBbind: -logKd/Ki=4.60, Kd~25uM
    19874 5nx9:A (2.3) BS04 AMP 4.3.2.2 GO:0000166 ... A0A384E0N4 30573755 PDBbind: -logKd/Ki=4.60, Kd~25uM
    19875 5nx9:D (2.3) BS01 AMP 4.3.2.2 GO:0000166 ... A0A384E0N4 30573755 PDBbind: -logKd/Ki=4.60, Kd~25uM
    19876 5nx9:D (2.3) BS04 AMP 4.3.2.2 GO:0000166 ... A0A384E0N4 30573755 PDBbind: -logKd/Ki=4.60, Kd~25uM
    19877 5nxg:A (1.2) BS02 RA1 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29316128 MOAD: Ki=2.8nM
    PDBbind: -logKd/Ki=8.55, Ki=2.8nM
    19878 5nxi:A (1.16) BS02 9DE 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29316128 MOAD: Ki=217.4nM
    PDBbind: -logKd/Ki=6.66, Ki=217.4nM
    19879 5nxo:A (1.2) BS02 9HK 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29316128 MOAD: Ki=4.9nM
    PDBbind: -logKd/Ki=8.31, Ki=4.9nM
    19880 5nxo:A (1.2) BS03 9HK 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29316128 MOAD: Ki=4.9nM
    PDBbind: -logKd/Ki=8.31, Ki=4.9nM
    19881 5nxp:A (1.25) BS02 9DH 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29316128 MOAD: Ki=10.2nM
    PDBbind: -logKd/Ki=7.99, Ki=10.2nM
    19882 5nxv:A (1.1) BS02 9E2 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29316128 MOAD: Ki=3.5nM
    PDBbind: -logKd/Ki=8.46, Ki=3.5nM
    19883 5nxw:A (1.1) BS02 RA9 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29316128 MOAD: Ki=57.4nM
    PDBbind: -logKd/Ki=7.24, Ki=57.4nM
    19884 5nxw:A (1.1) BS03 RA9 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29316128 MOAD: Ki=57.4nM
    PDBbind: -logKd/Ki=7.24, Ki=57.4nM
    19885 5nxx:C (2.2) BS01 3Q7 ? GO:0005886 ... P46922 29159878 PDBbind: -logKd/Ki=4.77, Ki=17uM
    19886 5nxy:A (1.9) BS01 1Y8 ? GO:0005886 ... Q45462 29159878 PDBbind: -logKd/Ki=5.05, Ki=9uM
    19887 5ny1:A (1.1) BS02 9E5 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29316128 MOAD: Ki=366.7nM
    PDBbind: -logKd/Ki=6.44, Ki=366.7nM
    19888 5ny3:A (1.4) BS02 9E8 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29316128 MOAD: Ki=33.9nM
    PDBbind: -logKd/Ki=7.47, Ki=33.9nM
    19889 5ny6:A (1.1) BS03 R92 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29316128 MOAD: Ki=13.5nM
    PDBbind: -logKd/Ki=7.87, Ki=13.5nM
    19890 5nya:A (1.2) BS02 FB2 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 29316128 MOAD: Ki=415.6nM
    PDBbind: -logKd/Ki=6.38, Ki=415.6nM
    BindingDB: Ki=1103nM, Kd=1149700nM
    19891 5nyh:A (1.65) BS01 9EK 3.6.4.10 GO:0005524 ... P07900 29701469 MOAD: Kd=18.7nM
    PDBbind: -logKd/Ki=7.73, Kd=18.7nM
    19892 5nyz:A (2.5) BS01 DUP 3.6.1.23 GO:0000287 ... A4ZF98 28894239 PDBbind: -logKd/Ki=5.03, Kd=9.4uM
    19893 5nz2:A (2.85) BS01 DUP 3.6.1.23 GO:0000287 ... A4ZF98 28894239 PDBbind: -logKd/Ki=5.03, Kd=9.4uM
    19894 5nz4:B (1.36) BS03 G39 3.2.1.18 GO:0004308 ... C3W6G3 29933553 MOAD: Kd=520nM
    PDBbind: -logKd/Ki=6.28, Kd=520nM
    19895 5nze:B (1.69) BS03 G39 3.2.1.18 GO:0004308 ... C3W6G3 29933553 MOAD: Kd=410nM
    PDBbind: -logKd/Ki=6.39, Kd=410nM
    19896 5nzf:A (1.75) BS03 G39 3.2.1.18 GO:0004308 ... C3W6G3 29933553 MOAD: Ki=94000nM
    PDBbind: -logKd/Ki=4.03, Ki=94000nM
    19897 5nzm:A (2.35) BS01 9ET 2.7.7.9 GO:0003983 ... Q4QDU3 N/A PDBbind: -logKd/Ki=3.90, IC50=127uM
    19898 5nzn:A (1.73) BS03 G39 3.2.1.18 GO:0004308 ... C3W6G3 29933553 MOAD: Ki=220000nM
    PDBbind: -logKd/Ki=3.66, Ki=220000nM
    19899 5nzo:B (1.29) BS01 9EZ 1.1.1.37
    1.1.1.399
    1.1.1.95
    GO:0051287 ... O43175 29568346 PDBbind: -logKd/Ki=2.24, Kd=5.8mM
    BindingDB: Kd=5800000nM
    19900 5nzp:B (1.3) BS01 9EW 1.1.1.37
    1.1.1.399
    1.1.1.95
    GO:0051287 ... O43175 29568346 MOAD: Kd=6.5mM
    PDBbind: -logKd/Ki=2.19, Kd=6.5mM
    BindingDB: Kd=6500000nM
    19901 5nzq:B (1.5) BS01 5AO 1.1.1.37
    1.1.1.399
    1.1.1.95
    GO:0016616 ... O43175 29568346 PDBbind: -logKd/Ki=2.03, Kd=9.3mM
    BindingDB: Kd=9300000nM
    19902 5o07:A (1.8) BS02 1VQ 4.2.1.1
    4.2.1.69
    GO:0002009 ... P00918 28738704 MOAD: Ki=33.8nM
    PDBbind: -logKd/Ki=7.47, Ki=33.8nM
    BindingDB: Ki=34nM
    19903 5o0a:A (1.805) BS01 9FH 2.7.7.3 GO:0003824 ... B1MDL6 28648615 MOAD: Kd=0.58mM
    PDBbind: -logKd/Ki=3.24, Kd=0.58mM
    19904 5o0a:B (1.805) BS01 9FH 2.7.7.3 GO:0003824 ... B1MDL6 28648615 MOAD: Kd=0.58mM
    PDBbind: -logKd/Ki=3.24, Kd=0.58mM
    19905 5o0b:A (1.735) BS01 9FE 2.7.7.3 GO:0003824 ... B1MDL6 28648615 MOAD: Kd=66uM
    PDBbind: -logKd/Ki=4.18, Kd=66uM
    19906 5o0b:A (1.735) BS02 9FE 2.7.7.3 GO:0003824 ... B1MDL6 28648615 MOAD: Kd=66uM
    PDBbind: -logKd/Ki=4.18, Kd=66uM
    19907 5o0j:A (1.81) BS01 8BR 2.7.1.-
    2.7.1.147
    GO:0000287 ... O58328 29784881 MOAD: Kd=16.85uM
    PDBbind: -logKd/Ki=4.77, Kd=16.85uM
    19908 5o0j:A (1.81) BS02 8BR 2.7.1.-
    2.7.1.147
    GO:0000287 ... O58328 29784881 MOAD: Kd=16.85uM
    PDBbind: -logKd/Ki=4.77, Kd=16.85uM
    19909 5o0s:A (1.16) BS02 9FQ 3.2.1.45 GO:0004348 ... F6BL85 28776021 PDBbind: -logKd/Ki=4.24, IC50=58uM
    19910 5o11:A (2.4) BS01 3NG 2.7.11.1 GO:0004672 ... P11309 29042609 MOAD: ic50=0.216uM
    PDBbind: -logKd/Ki=6.67, IC50=0.216uM
    BindingDB: IC50=48nM
    19911 5o1a:A (1.44) BS02 9H5 ? GO:0000976 ... P04637 29702446 MOAD: Kd=30uM
    PDBbind: -logKd/Ki=4.52, Kd=30uM
    BindingDB: Kd=30000nM
    19912 5o1b:A (1.43) BS02 9H2 ? GO:0000976 ... P04637 29702446 MOAD: Kd=20uM
    PDBbind: -logKd/Ki=4.70, Kd=20uM
    BindingDB: Kd=20000nM
    19913 5o1c:A (1.32) BS02 9GZ ? GO:0000976 ... P04637 29702446 MOAD: Kd=113uM
    PDBbind: -logKd/Ki=3.95, Kd=113uM
    BindingDB: Kd=113000nM
    19914 5o1d:A (1.36) BS02 9GW ? GO:0000976 ... P04637 29702446 MOAD: Kd=22uM
    PDBbind: -logKd/Ki=4.66, Kd=22uM
    BindingDB: Kd=22000nM
    19915 5o1e:A (1.3) BS02 9GT ? GO:0000976 ... P04637 29702446 MOAD: Kd=33uM
    PDBbind: -logKd/Ki=4.48, Kd=33uM
    BindingDB: Kd=33000nM
    19916 5o1f:A (1.38) BS02 9GQ ? GO:0000976 ... P04637 29702446 MOAD: Kd=30uM
    PDBbind: -logKd/Ki=4.52, Kd=30uM
    BindingDB: Kd=30000nM
    19917 5o1g:A (1.35) BS02 9GK ? GO:0000976 ... P04637 29702446 MOAD: Kd=116uM
    PDBbind: -logKd/Ki=3.94, Kd=116uM
    BindingDB: Kd=116000nM
    19918 5o1h:A (1.32) BS02 9GN ? GO:0000976 ... P04637 29702446 MOAD: Kd=14uM
    PDBbind: -logKd/Ki=4.85, Kd=14uM
    BindingDB: Kd=14000nM
    19919 5o1i:A (1.4) BS02 9GH ? GO:0000976 ... P04637 29702446 MOAD: Kd=4uM
    PDBbind: -logKd/Ki=5.40, Kd=4uM
    BindingDB: Kd=4000nM
    19920 5o1s:A (1.9) BS01 9HB 2.7.11.1 GO:0004672 ... P18654 30341347 PDBbind: -logKd/Ki=3.65, IC50=225uM
    19921 5o1s:A (1.9) BS02 9HB 2.7.11.1 GO:0004672 ... P18654 30341347 PDBbind: -logKd/Ki=3.65, IC50=225uM
    19922 5o22:A (2.1) BS01 C3R 1.5.1.5
    3.5.4.9
    GO:0000105 ... P24186 29142318 MOAD: Kd=10nM
    PDBbind: -logKd/Ki=8.00, Kd=10nM
    19923 5o2d:A (1.6) BS01 9HH 2.4.2.- N/A Q460N5 28991428 PDBbind: -logKd/Ki=5.68, Kd=2.1uM
    BindingDB: IC50=900nM, Kd=2100nM
    19924 5o3q:A (1.75) BS01 CMP ? GO:0005886 ... P73954 29735650 MOAD: Kd=2.1uM
    PDBbind: -logKd/Ki=5.68, Kd=2.1uM
    19925 5o3q:A (1.75) BS02 CMP ? GO:0005886 ... P73954 29735650 MOAD: Kd=2.1uM
    PDBbind: -logKd/Ki=5.68, Kd=2.1uM
    19926 5o3q:C (1.75) BS01 CMP ? GO:0005886 ... P73954 29735650 PDBbind: -logKd/Ki=5.68, Kd=2.1uM
    19927 5o3q:C (1.75) BS02 CMP ? GO:0005886 ... P73954 29735650 PDBbind: -logKd/Ki=5.68, Kd=2.1uM
    19928 5o3r:A (1.9) BS01 AMP ? GO:0005886 ... P73954 29735650 MOAD: Kd=10.1uM
    PDBbind: -logKd/Ki=5.00, Kd=10.1uM
    19929 5o3r:A (1.9) BS02 AMP ? GO:0005886 ... P73954 29735650 MOAD: Kd=10.1uM
    PDBbind: -logKd/Ki=5.00, Kd=10.1uM
    19930 5o3r:B (1.9) BS01 AMP ? GO:0005886 ... P73954 29735650 PDBbind: -logKd/Ki=5.00, Kd=10.1uM
    19931 5o3r:B (1.9) BS02 AMP ? GO:0005886 ... P73954 29735650 PDBbind: -logKd/Ki=5.00, Kd=10.1uM
    19932 5o48:A (1.69) BS02 9K2 2.3.1.97 GO:0004379 ... A5K1A2 29760414 PDBbind: -logKd/Ki=4.70, IC50=20uM
    19933 5o4f:B (2.1) BS01 8VE ? GO:0015276 ... P42264 28691798 MOAD: Ki=208uM
    PDBbind: -logKd/Ki=6.68, Ki=208nM
    19934 5o4s:A (1.75) BS01 9KW ? N/A P55201 29902720 MOAD: ic50=3.4uM
    PDBbind: -logKd/Ki=5.47, IC50=3.4uM
    BindingDB: Kd=2500nM, IC50=3400nM
    19935 5o4t:A (1.5) BS01 9KT ? N/A P55201 29902720 PDBbind: -logKd/Ki=3.40, IC50>400uM
    BindingDB: IC50=>400000nM
    19936 5o4z:A (1.7) BS01 A ? GO:0000166 ... Q9X1T1 29107484 PDBbind: -logKd/Ki=6.07, Kd=860nM
    19937 5o4z:A (1.7) BS02 A ? GO:0000166 ... Q9X1T1 29107484 PDBbind: -logKd/Ki=6.07, Kd=860nM
    19938 5o55:A (1.45) BS01 9L5 ? N/A P55201 29902720 PDBbind: -logKd/Ki=4.70, Kd=20uM
    BindingDB: Kd=20000nM
    19939 5o5a:A (1.6) BS01 9LN ? N/A P55201 29902720 PDBbind: -logKd/Ki=4.77, Kd=17uM
    BindingDB: Kd=17000nM
    19940 5o5f:A (1.302) BS01 9LT ? N/A P55201 29902720 PDBbind: -logKd/Ki=4.30, Kd>50uM
    BindingDB: Kd=>50000nM
    19941 5o5h:A (1.85) BS01 9LK ? N/A P55201 29902720 PDBbind: -logKd/Ki=4.12, IC50>75uM
    BindingDB: Kd=>75000nM
    19942 5o5h:A (1.85) BS02 9LK ? N/A P55201 29902720 PDBbind: -logKd/Ki=4.12, IC50>75uM
    BindingDB: Kd=>75000nM
    19943 5o5m:A (1.583) BS02 9LQ 2.7.11.11 GO:0000287 ... P25321 N/A PDBbind: -logKd/Ki=5.23, Kd=5.86uM
    19944 5o7e:A (1.87) BS03 9NB 3.4.24.3 GO:0004222 ... Q46085 28820255 MOAD: ic50=0.017uM
    PDBbind: -logKd/Ki=8.00, IC50=0.010uM
    BindingDB: IC50=17nM
    19945 5o83:A (2.9) BS01 9NQ 2.7.1.137
    2.7.1.153
    GO:0016301 ... O35904 28947947 PDBbind: -logKd/Ki=7.96, IC50=0.011uM
    BindingDB: IC50=101nM
    19946 5o87:A (2.2) BS01 NCT ? GO:0004888 ... Q8WSF8 31709057 PDBbind: -logKd/Ki=6.61, Kd=245nM
    BindingDB: Ki=598nM
    19947 5o87:A (2.2) BS02 NCT ? GO:0004888 ... Q8WSF8 31709057 PDBbind: -logKd/Ki=6.61, Kd=245nM
    BindingDB: Ki=598nM
    19948 5o87:B (2.2) BS01 NCT ? GO:0004888 ... Q8WSF8 31709057 PDBbind: -logKd/Ki=6.61, Kd=245nM
    BindingDB: Ki=598nM
    19949 5o8t:A (2.2) BS01 SY9 ? GO:0004888 ... Q8WSF8 31709057 PDBbind: -logKd/Ki=7.13, Kd=74.1nM
    19950 5o8t:A (2.2) BS02 SY9 ? GO:0004888 ... Q8WSF8 31709057 PDBbind: -logKd/Ki=7.13, Kd=74.1nM
    19951 5o8t:B (2.2) BS01 SY9 ? GO:0004888 ... Q8WSF8 31709057 PDBbind: -logKd/Ki=7.13, Kd=74.1nM
    19952 5o91:A (3.2) BS01 C5N 2.7.12.1 GO:0004672 ... P33981 28726638 PDBbind: -logKd/Ki=6.46, Kd=349nM
    19953 5o9h:A (2.7) BS01 9P2 ? GO:0004875 ... P21730 29300009 PDBbind: -logKd/Ki=6.62, IC50=241nM
    19954 5o9h:B (2.7) BS01 9P2 ? GO:0004875 ... P21730 29300009 PDBbind: -logKd/Ki=6.62, IC50=241nM
    19955 5o9h:B (2.7) BS02 9P2 ? GO:0004875 ... P21730 29300009 PDBbind: -logKd/Ki=6.62, IC50=241nM
    19956 5o9o:A (1.9) BS01 9PB 2.4.1.- N/A Q06135 29164827 MOAD: Kd=13uM
    PDBbind: -logKd/Ki=4.89, Kd=13.00uM
    19957 5o9p:A (1.75) BS01 9P8 2.4.1.- N/A Q06135 29164827 MOAD: Kd=8.06uM
    PDBbind: -logKd/Ki=5.09, Kd=8.06uM
    19958 5o9q:A (1.4) BS04 9PH 2.4.1.- N/A Q06135 29164827 MOAD: Kd=6.2uM
    PDBbind: -logKd/Ki=5.21, Kd=6.2uM
    19959 5o9r:A (1.7) BS04 9PK 2.4.1.- N/A Q06135 29164827 MOAD: Kd=4.09uM
    PDBbind: -logKd/Ki=5.39, Kd=4.09uM
    19960 5o9y:A (1.57) BS01 9PN 2.4.1.- N/A Q06135 29164827 MOAD: Kd=4.6uM
    PDBbind: -logKd/Ki=5.34, Kd=4.60uM
    19961 5oa2:C (2.15) BS04 9PW 2.4.1.- N/A Q06135 29164827 MOAD: Kd=9.8uM
    PDBbind: -logKd/Ki=5.01, Kd=9.80uM
    19962 5oa6:A (1.94) BS01 9PT 2.4.1.- N/A Q06135 29164827 MOAD: Kd=3.1uM
    PDBbind: -logKd/Ki=5.51, Kd=3.10uM
    19963 5oae:A (2.7) BS03 SVF ? GO:0016491 ... B2ZB02 29634898 PDBbind: -logKd/Ki=4.60, IC50=25.11uM
    19964 5oah:A (1.8) BS02 95B ? GO:0006826 ... Q0P8Q4 N/A PDBbind: -logKd/Ki=8.31, Kd=4.9nM
    19965 5oai:A (2.0) BS01 B5K 2.3.2.27 GO:0005634 ... Q00987 30715803 MOAD: Ki=0.1uM
    PDBbind: -logKd/Ki=5.15, Kd=7uM
    BindingDB: Ki=0.13nM
    19966 5oaj:D (2.47) BS01 TKT ? GO:0004888 ... Q8WSF8 31709057 PDBbind: -logKd/Ki=6.56, Kd=275nM
    19967 5oax:A (1.2) BS01 9Q5 ? GO:0030246 ... P17931 29284090 MOAD: Kd=27nM
    PDBbind: -logKd/Ki=7.57, Kd=27nM
    19968 5obg:A (2.0) BS01 SY9 ? GO:0004888 ... Q8WSF8 31709057 PDBbind: -logKd/Ki=7.13, Kd=74.1nM
    19969 5obg:B (2.0) BS01 SY9 ? GO:0004888 ... Q8WSF8 31709057 PDBbind: -logKd/Ki=7.13, Kd=74.1nM
    19970 5obj:A (2.901) BS02 9QK 2.7.11.1 GO:0000212 ... O14965 28787041 PDBbind: -logKd/Ki=4.78, Ki=16.5uM
    19971 5obr:A (2.62) BS01 9QT 2.7.11.1 GO:0000212 ... O14965 28787041 PDBbind: -logKd/Ki=5.36, Ki=4.4uM
    19972 5oci:A (1.62) BS01 9R8 3.6.4.10 GO:0005524 ... P07900 29701469 MOAD: Kd=9nM
    PDBbind: -logKd/Ki=8.05, Kd=9.0nM
    19973 5ocj:A (1.8) BS01 9SW 2.3.1.122
    2.3.1.20
    GO:0004144 ... P9WQN9 29301937 PDBbind: -logKd/Ki=4.82, IC50=15uM
    19974 5ocj:A (1.8) BS02 9SW 2.3.1.122
    2.3.1.20
    GO:0004144 ... P9WQN9 29301937 PDBbind: -logKd/Ki=4.82, IC50=15uM
    19975 5od5:A (1.9) BS02 95B ? GO:0006826 ... Q0P8Q4 N/A PDBbind: -logKd/Ki=7.74, Kd=18.3nM
    19976 5od5:A (1.9) BS03 9RT ? GO:0006826 ... Q0P8Q4 N/A PDBbind: -logKd/Ki=7.74, Kd=18.3nM
    19977 5odu:F (1.56) BS01 AMG ? GO:0030246 ... Q7N561 28972138 MOAD: ic50=0.52mM
    PDBbind: -logKd/Ki=3.28, IC50=0.52mM
    19978 5odx:A (1.82) BS01 9RZ 3.6.4.10 GO:0005524 ... P07900 29701469 MOAD: Kd=195nM
    PDBbind: -logKd/Ki=6.71, Kd=195nM
    19979 5ody:A (1.149) BS01 9SK ? GO:0030246 ... P17931 29284090 MOAD: Kd=4nM
    PDBbind: -logKd/Ki=8.40, Kd=4.0nM
    19980 5oei:A (1.78) BS01 OOG ? N/A Q6N193 29082669 MOAD: Kd=1.6uM
    PDBbind: -logKd/Ki=5.80, Kd=1.60uM
    19981 5of0:A (1.48) BS05 9TB 3.4.17.21 GO:0004180 ... Q04609 30429952 PDBbind: -logKd/Ki=8.63, IC50=2.32nM
    BindingDB: IC50=2.3nM
    19982 5ofi:C (2.0) BS02 9TQ ? GO:0030246 ... Q7N561 28972138 MOAD: Kd=62.7uM
    PDBbind: -logKd/Ki=4.20, Kd=62.7uM
    19983 5ofu:A (2.62) BS01 AMP 3.1.3.11 GO:0000166 ... O97193 28882541 PDBbind: -logKd/Ki=4.20, Ki=63.8uM
    19984 5ofv:B (1.5) BS01 9TZ 1.1.1.37
    1.1.1.399
    1.1.1.95
    GO:0016616 ... O43175 29568346 MOAD: Kd=26.2mM
    PDBbind: -logKd/Ki=1.58, Kd=26.2mM
    19985 5ofw:B (1.5) BS01 9TW 1.1.1.37
    1.1.1.399
    1.1.1.95
    GO:0016616 ... O43175 29568346 MOAD: Kd=1.6mM
    PDBbind: -logKd/Ki=2.80, Kd=1.6mM
    BindingDB: Kd=1500000nM
    19986 5ogk:A (3.6) BS01 GDD ? GO:0000139 ... P40107 29143814 PDBbind: -logKd/Ki=5.11, IC50=7.7uM
    19987 5ogl:A (2.7) BS04 9UB 2.4.99.19 GO:0000287 ... B9KDD4 29058712 PDBbind: -logKd/Ki=4.31, Kd=48.5uM
    19988 5oh1:C (1.7) BS02 9UQ ? GO:0046872 ... A4TVL0 31459225 PDBbind: -logKd/Ki=4.41, Ki=39uM
    19989 5oh2:A (1.9) BS02 BAQ ? GO:0046872 ... A4TVL0 31459225 PDBbind: -logKd/Ki=4.24, Ki=57uM
    19990 5oh3:A (2.1) BS02 9V2 ? GO:0046872 ... A4TVL0 31459225 PDBbind: -logKd/Ki=3.87, Ki=136uM
    19991 5oh4:A (2.3) BS02 9UZ ? GO:0046872 ... A4TVL0 31459225 PDBbind: -logKd/Ki=4.55, Ki=28uM
    BindingDB: Ki=28000nM, IC50=48900nM
    19992 5oh7:A (1.85) BS02 HYN ? GO:0046872 ... A4TVL0 31459225 PDBbind: -logKd/Ki=4.37, Ki=43uM
    19993 5oh9:A (1.65) BS02 9UT ? GO:0046872 ... A4TVL0 31459225 PDBbind: -logKd/Ki=3.86, Ki=137uM
    19994 5oha:A (1.55) BS02 9UW ? GO:0046872 ... A4TVL0 31459225 PDBbind: -logKd/Ki=4.89, Kd=13uM
    19995 5ohi:A (1.66) BS06 9V8 3.1.4.39 GO:0003676 ... Q9R1E6 29259743 PDBbind: -logKd/Ki=8.47, IC50=3.4nM
    19996 5ohj:A (1.6) BS02 9VE 3.1.4.53 GO:0004114 ... Q07343 29200281 MOAD: ic50=0.0378nM
    PDBbind: -logKd/Ki=10.42, IC50=0.0378nM
    19997 5oje:A (1.579) BS01 VSK 3.4.23.22 GO:0004190 ... P11838 30178575 MOAD: Ki=6.1uM
    PDBbind: -logKd/Ki=5.21, Ki=6.1uM
    19998 5okt:A (2.13) BS01 9XK 2.7.11.1
    2.7.11.26
    GO:0004672 ... P48730 29630366 MOAD: ic50=317nM
    PDBbind: -logKd/Ki=6.03, IC50=0.93uM
    19999 5oku:A (2.07) BS01 0L1 ? N/A Q6N193 29082669 MOAD: Kd=0.55uM
    PDBbind: -logKd/Ki=6.26, Kd=0.55uM
    20000 5olb:A (1.82) BS05 6ZO 3.1.4.39 GO:0003676 ... Q9R1E6 29259743 PDBbind: -logKd/Ki=7.89, IC50=13nM
    BindingDB: IC50=2.8nM

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218