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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 26009 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    5801 2vvt:A (1.65) BS01 I24 5.1.1.3 GO:0008360 ... Q836J0 18614367 MOAD: ic50=5.8uM
    PDBbind: -logKd/Ki=5.24, IC50=5.8uM
    BindingDB: IC50=5800nM
    5802 2vvt:B (1.65) BS01 I24 5.1.1.3 GO:0008360 ... Q836J0 18614367 MOAD: ic50=5.8uM
    BindingDB: IC50=5800nM
    5803 2vw1:A (2.39) BS01 DAN 3.2.1.18 GO:0004308 ... Q54727 18835278 MOAD: Ki=0.3mM
    PDBbind: -logKd/Ki=3.52, Ki=0.3mM
    5804 2vw5:A (1.9) BS01 BC6 ? GO:0005524 ... P02829 18800759 MOAD: Kd=3nM
    PDBbind: -logKd/Ki=8.52, Kd=3nM
    5805 2vw5:B (1.9) BS01 BC6 ? GO:0005524 ... P02829 18800759 MOAD: Kd=3nM
    5806 2vw5:C (1.9) BS01 BC6 ? GO:0005524 ... P02829 18800759 MOAD: Kd=3nM
    5807 2vw5:D (1.9) BS01 BC6 ? GO:0005524 ... P02829 18800759 MOAD: Kd=3nM
    5808 2vwc:A (2.4) BS01 BC2 ? GO:0005524 ... P02829 18357975 MOAD: Kd=0.24uM
    PDBbind: -logKd/Ki=6.62, Kd=0.24uM
    5809 2vwu:A (2.0) BS01 7X1 2.7.10.1 GO:0004672 ... P54760 18434142 MOAD: ic50=0.35uM
    PDBbind: -logKd/Ki=6.46, IC50=0.35uM
    BindingDB: IC50=350nM
    5810 2vwv:A (1.9) BS01 7X3 2.7.10.1 GO:0004672 ... P54760 18434142 MOAD: ic50=16uM
    PDBbind: -logKd/Ki=4.80, IC50=16uM
    BindingDB: IC50=16000nM
    5811 2vww:A (1.9) BS01 7X2 2.7.10.1 GO:0004672 ... P54760 18434142 MOAD: ic50=0.24uM
    PDBbind: -logKd/Ki=6.62, IC50=0.24uM
    BindingDB: IC50=240nM
    5812 2vwx:A (1.65) BS01 7X4 2.7.10.1 GO:0004672 ... P54760 18851911 MOAD: ic50=0.04uM
    PDBbind: -logKd/Ki=7.40, IC50=0.04uM
    BindingDB: IC50=40nM
    5813 2vwy:A (1.65) BS01 7X5 2.7.10.1 GO:0004672 ... P54760 18851911 MOAD: ic50=0.09uM
    PDBbind: -logKd/Ki=7.05, IC50=0.09uM
    BindingDB: IC50=90nM
    5814 2vwz:A (1.65) BS01 7X6 2.7.10.1 GO:0004672 ... P54760 18851911 MOAD: ic50=0.794uM
    PDBbind: -logKd/Ki=6.10, IC50=0.794uM
    BindingDB: IC50=741nM
    5815 2vx0:A (2.1) BS01 7X7 2.7.10.1 GO:0004672 ... P54760 18434142 MOAD: ic50=0.58uM
    PDBbind: -logKd/Ki=6.24, IC50=0.58uM
    BindingDB: IC50=580nM
    5816 2vx1:A (1.65) BS01 7X8 2.7.10.1 GO:0004672 ... P54760 18851911 MOAD: ic50=0.22uM
    PDBbind: -logKd/Ki=6.66, IC50=0.220uM
    BindingDB: IC50=900nM
    5817 2vyt:A (1.9) BS01 MLZ ? GO:0005634 ... Q9UQR0 18706910 MOAD: Kd=1.84mM
    PDBbind: -logKd/Ki=2.74, Kd=1.84mM
    5818 2vyt:B (1.9) BS01 MLZ ? GO:0005634 ... Q9UQR0 18706910 MOAD: Kd=1.84mM
    5819 2vz0:A (1.9) BS02 D64 1.5.1.33 GO:0000166 ... O76290 19748480 MOAD: Ki=9.8nM
    5820 2vz0:B (1.9) BS02 D64 1.5.1.33 GO:0000166 ... O76290 19748480 MOAD: Ki=9.8nM
    5821 2vz0:C (1.9) BS02 D64 1.5.1.33 GO:0000166 ... O76290 19748480 MOAD: Ki=9.8nM
    5822 2vz0:D (1.9) BS02 D64 1.5.1.33 GO:0000166 ... O76290 19748480 MOAD: Ki=9.8nM
    5823 2vzl:A (1.93) BS02 NAD 1.18.1.2 GO:0016491 ... P21890 19219975 MOAD: Kd=550uM
    5824 2vzm:A (1.85) BS02 NRB 1.14.15.33 GO:0004497 ... O87605 19124459 MOAD: Kd=171.9uM
    5825 2vzm:B (1.85) BS02 NRB 1.14.15.33 GO:0004497 ... O87605 19124459 MOAD: Kd=171.9uM
    5826 2vzr:A (1.95) BS02 GCU 3.2.1.165 GO:0030246 ... Q56F26 19218457 MOAD: Ka=19000M^-1
    PDBbind: -logKd/Ki=4.28, Kd=52.6uM
    5827 2vzr:B (1.95) BS02 GCU 3.2.1.165 GO:0030246 ... Q56F26 19218457 MOAD: Ka=19000M^-1
    5828 2w05:A (1.9) BS01 FRT 2.7.11.22 GO:0000082 ... P24941 18815031 MOAD: ic50=0.001uM
    PDBbind: -logKd/Ki=9.00, IC50=1nM
    BindingDB: IC50=1nM
    5829 2w08:A (1.7) BS03 TPO ? GO:0001849 ... P02743 19372378 MOAD: Kd=380uM
    PDBbind: -logKd/Ki=3.42, Kd=380uM
    5830 2w08:B (1.7) BS03 TPO ? GO:0001849 ... P02743 19372378 MOAD: Kd=380uM
    5831 2w08:C (1.7) BS03 TPO ? GO:0001849 ... P02743 19372378 MOAD: Kd=380uM
    5832 2w08:D (1.7) BS03 TPO ? GO:0001849 ... P02743 19372378 MOAD: Kd=380uM
    5833 2w08:E (1.7) BS03 TPO ? GO:0001849 ... P02743 19372378 MOAD: Kd=380uM
    5834 2w09:A (1.57) BS02 CM9 1.14.15.36 GO:0004497 ... P9WPP9 19190730 MOAD: Kd=35.4uM
    5835 2w0b:A (1.56) BS02 CMW 1.14.15.36 GO:0004497 ... P9WPP9 19190730 MOAD: Kd=58.3uM
    5836 2w0d:A (2.0) BS06 CGS 3.4.24.65 GO:0004222 ... P39900 19239231 MOAD: ic50~2nM
    PDBbind: -logKd/Ki=8.70, IC50=2.0nM
    5837 2w0d:A (2.0) BS07 CGS 3.4.24.65 GO:0004222 ... P39900 19239231 MOAD: ic50~2nM
    PDBbind: -logKd/Ki=8.70, IC50=2.0nM
    5838 2w0d:B (2.0) BS06 CGS 3.4.24.65 GO:0004222 ... P39900 19239231 MOAD: ic50~2nM
    5839 2w0d:C (2.0) BS06 CGS 3.4.24.65 GO:0004222 ... P39900 19239231 MOAD: ic50~2nM
    5840 2w0d:D (2.0) BS06 CGS 3.4.24.65 GO:0004222 ... P39900 19239231 MOAD: ic50~2nM
    5841 2w0j:A (2.05) BS01 ZAT 2.7.11.1 GO:0004672 ... O96017 19177354 MOAD: ic50=240nM
    PDBbind: -logKd/Ki=6.62, IC50=240nM
    5842 2w0x:A (2.12) BS02 PD2 1.14.11.30
    1.14.11.n4    		 GO:0003714 ... Q9NWT6 20822901 MOAD: ic50=625uM
    PDBbind: -logKd/Ki=3.20, IC50=625uM
    BindingDB: IC50=8600nM
    5843 2w14:A (1.08) BS02 WR2 3.4.24.- GO:0004222 ... P83512 19485419 MOAD: ic50=22.2uM
    5844 2w17:A (2.15) BS01 I19 2.7.11.22 GO:0000082 ... P24941 18996007 MOAD: ic50=0.002uM
    PDBbind: -logKd/Ki=8.70, IC50=2nM
    BindingDB: IC50=2nM
    5845 2w1h:A (2.15) BS01 L0F 2.7.11.22 GO:0000082 ... P24941 19143567 MOAD: ic50=0.052uM
    PDBbind: -logKd/Ki=7.28, IC50=52nM
    BindingDB: IC50=52nM
    5846 2w26:A (2.08) BS01 RIV 3.4.21.6 GO:0004252 ... P00742 16161994 MOAD: Ki=0.4nM
    PDBbind: -logKd/Ki=9.40, Ki=0.4nM
    BindingDB: IC50=700nM, Ki=0.400000nM
    5847 2w3i:A (1.9) BS02 L1C 3.4.21.6 GO:0004252 ... P00742 19231206 MOAD: ic50=0.1nM
    PDBbind: -logKd/Ki=10.00, IC50=0.1nM
    BindingDB: IC50=0.1nM
    5848 2w3k:A (2.05) BS01 L1D 3.4.21.6 GO:0004252 ... P00742 19231206 MOAD: ic50=0.08nM
    PDBbind: -logKd/Ki=10.10, IC50=0.08nM
    BindingDB: IC50=0.08nM
    5849 2w4i:B (1.87) BS02 VGA 5.1.1.3 GO:0008360 ... Q9ZLT0 19097892 MOAD: ic50=0.5uM
    PDBbind: -logKd/Ki=6.30, IC50=0.5uM
    BindingDB: IC50=500nM
    5850 2w4i:E (1.87) BS02 VGA 5.1.1.3 GO:0008360 ... Q9ZLT0 19097892 MOAD: ic50=0.5uM
    BindingDB: IC50=500nM
    5851 2w4x:A (2.42) BS01 STZ 3.2.1.169 GO:0005975 ... Q89ZI2 19217614 MOAD: Kd=14uM
    PDBbind: -logKd/Ki=4.85, Kd=14uM
    5852 2w5g:A (1.7) BS01 ATP 4.6.1.18 GO:0003676 ... P61823 19191310 MOAD: Ki=0.86uM
    PDBbind: -logKd/Ki=6.07, Ki=860nM
    5853 2w5g:B (1.7) BS01 ATP 4.6.1.18 GO:0003676 ... P61823 19191310 MOAD: Ki=0.86uM
    5854 2w5i:A (2.4) BS01 ATP 4.6.1.18 GO:0003676 ... P61823 19191310 MOAD: Ki=0.86uM
    PDBbind: -logKd/Ki=4.54, Ki=29uM
    5855 2w5i:B (2.4) BS01 ATP 4.6.1.18 GO:0003676 ... P61823 19191310 MOAD: Ki=0.86uM
    5856 2w5k:A (1.7) BS01 NDP 4.6.1.18 GO:0003676 ... P61823 19191310 MOAD: Ki=12uM
    5857 2w5k:B (1.7) BS01 NDP 4.6.1.18 GO:0003676 ... P61823 19191310 MOAD: Ki=12uM
    5858 2w5l:A (1.7) BS01 NAP 4.6.1.18 GO:0003676 ... P61823 19191310 MOAD: Ki=63uM
    5859 2w5l:B (1.7) BS01 NAP 4.6.1.18 GO:0003676 ... P61823 19191310 MOAD: Ki=63uM
    5860 2w66:A (2.27) BS01 HQ6 3.2.1.169 GO:0005975 ... Q89ZI2 19331390 MOAD: Ki=89uM
    PDBbind: -logKd/Ki=4.05, Ki=89uM
    5861 2w66:B (2.27) BS01 HQ6 3.2.1.169 GO:0005975 ... Q89ZI2 19331390 MOAD: Ki=89uM
    5862 2w67:A (2.25) BS01 F34 3.2.1.169 GO:0005975 ... Q89ZI2 19331390 MOAD: Ki=11uM
    PDBbind: -logKd/Ki=4.96, Ki=11uM
    5863 2w67:B (2.25) BS01 F34 3.2.1.169 GO:0005975 ... Q89ZI2 19331390 MOAD: Ki=11uM
    5864 2w6m:A (2.0) BS01 OA1 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=21.5uM
    PDBbind: -logKd/Ki=4.67, IC50=21.5uM
    BindingDB: IC50=21500nM
    5865 2w6m:B (2.0) BS01 OA1 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=21.5uM
    BindingDB: IC50=21500nM
    5866 2w6n:A (1.87) BS01 OA2 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=0.125uM
    PDBbind: -logKd/Ki=6.90, IC50=0.125uM
    BindingDB: IC50=125nM
    5867 2w6n:B (1.87) BS01 OA2 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=0.125uM
    BindingDB: IC50=125nM
    5868 2w6o:A (2.5) BS01 OA3 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=60.8uM
    PDBbind: -logKd/Ki=4.22, IC50=60.8uM
    BindingDB: IC50=60800nM
    5869 2w6o:C (2.5) BS01 OA3 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=60.8uM
    BindingDB: IC50=60800nM
    5870 2w6p:A (1.85) BS01 OA4 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=0.333uM
    PDBbind: -logKd/Ki=6.48, IC50=0.333uM
    BindingDB: IC50=333nM
    5871 2w6q:A (2.05) BS01 OA5 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=25.4uM
    PDBbind: -logKd/Ki=4.60, IC50=25.4uM
    BindingDB: IC50=25400nM
    5872 2w6q:B (2.05) BS01 OA5 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=25.4uM
    BindingDB: IC50=25400nM
    5873 2w6z:A (1.9) BS01 L21 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=1500uM
    PDBbind: -logKd/Ki=2.82, IC50=1500uM
    BindingDB: IC50=1500000nM
    5874 2w70:A (1.77) BS01 L22 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=12uM
    PDBbind: -logKd/Ki=4.92, IC50=12.0uM
    BindingDB: IC50=12000nM
    5875 2w70:B (1.77) BS01 L22 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=12uM
    BindingDB: IC50=12000nM
    5876 2w71:A (1.99) BS01 L23 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=0.334uM
    PDBbind: -logKd/Ki=6.48, IC50=0.334uM
    BindingDB: IC50=334nM
    5877 2w71:C (1.99) BS01 L23 6.3.4.14 GO:0003824 ... P24182 19413326 MOAD: ic50=0.334uM
    BindingDB: IC50=334nM
    5878 2w7x:A (2.07) BS01 D1A 2.7.11.1 GO:0004672 ... O96017 19741151 MOAD: ic50=24nM
    PDBbind: -logKd/Ki=7.62, IC50=24nM
    5879 2w92:A (1.65) BS01 NGT ? GO:0005737 ... Q93HW0 19181667 MOAD: Kd=28uM
    PDBbind: -logKd/Ki=4.55, Kd=28uM
    5880 2w97:A (2.29) BS02 MGO ? GO:0000082 ... P06730 19440045 MOAD: Kd~9nM
    5881 2w9g:A (1.95) BS01 TOP 1.5.1.3 GO:0004146 ... P0A017 19280600 MOAD: Kd=0.97nM
    BindingDB: Ki=3.4nM, IC50=14.4nM
    5882 2w9g:A (1.95) BS02 NDP 1.5.1.3 GO:0004146 ... P0A017 19280600 MOAD: Kd=8.1nM
    5883 2w9h:A (1.48) BS01 TOP 1.5.1.3 GO:0004146 ... P0A017 19280600 MOAD: Kd=430nM
    PDBbind: -logKd/Ki=6.37, Kd=430nM
    BindingDB: Ki=3.4nM, IC50=14.4nM
    5884 2w9s:A (1.8) BS01 NDP 1.5.1.3 GO:0004146 ... P13955 19280600 MOAD: Kd=2370nM
    5885 2w9s:A (1.8) BS02 TOP 1.5.1.3 GO:0004146 ... P13955 19280600 MOAD: Kd=730nM
    BindingDB: IC50=1.51e+4nM
    5886 2w9s:B (1.8) BS01 NDP 1.5.1.3 GO:0004146 ... P13955 19280600 MOAD: Kd=2370nM
    5887 2w9s:B (1.8) BS02 TOP 1.5.1.3 GO:0004146 ... P13955 19280600 MOAD: Kd=730nM
    BindingDB: IC50=1.51e+4nM
    5888 2w9s:C (1.8) BS01 NDP 1.5.1.3 GO:0004146 ... P13955 19280600 MOAD: Kd=2370nM
    5889 2w9s:C (1.8) BS02 TOP 1.5.1.3 GO:0004146 ... P13955 19280600 MOAD: Kd=730nM
    BindingDB: IC50=1.51e+4nM
    5890 2w9s:D (1.8) BS01 TOP 1.5.1.3 GO:0004146 ... P13955 19280600 MOAD: Kd=730nM
    BindingDB: IC50=1.51e+4nM
    5891 2w9s:E (1.8) BS01 TOP 1.5.1.3 GO:0004146 ... P13955 19280600 MOAD: Kd=730nM
    BindingDB: IC50=1.51e+4nM
    5892 2w9s:F (1.8) BS01 TOP 1.5.1.3 GO:0004146 ... P13955 19280600 MOAD: Kd=730nM
    BindingDB: IC50=1.51e+4nM
    5893 2wa3:A (2.5) BS02 A29 1.14.11.30
    1.14.11.n4    		 GO:0003714 ... Q9NWT6 20822901 MOAD: ic50=1mM
    PDBbind: -logKd/Ki=3.00, IC50=1mM
    5894 2wa4:A (2.5) BS02 069 1.14.11.30
    1.14.11.n4    		 GO:0003714 ... Q9NWT6 20822901 MOAD: ic50=18uM
    PDBbind: -logKd/Ki=4.74, IC50=18uM
    5895 2wa4:A (2.5) BS03 069 1.14.11.30
    1.14.11.n4    		 GO:0003714 ... Q9NWT6 20822901 MOAD: ic50=18uM
    PDBbind: -logKd/Ki=4.74, IC50=18uM
    5896 2waj:A (2.4) BS01 SNB 2.7.11.24 GO:0004672 ... P53779 19303774 MOAD: ic50=0.398uM
    PDBbind: -logKd/Ki=6.40, IC50=0.398uM
    BindingDB: IC50=398.11nM
    5897 2wbb:A (2.22) BS01 RO3 3.1.3.11 GO:0000122 ... P09467 19969452 MOAD: ic50=0.92uM
    PDBbind: -logKd/Ki=6.04, IC50=0.92uM
    5898 2wbb:B (2.22) BS01 RO3 3.1.3.11 GO:0000122 ... P09467 19969452 MOAD: ic50=0.92uM
    5899 2wbb:C (2.22) BS01 RO3 3.1.3.11 GO:0000122 ... P09467 19969452 MOAD: ic50=0.92uM
    PDBbind: -logKd/Ki=6.04, IC50=0.92uM
    5900 2wbb:D (2.22) BS01 RO3 3.1.3.11 GO:0000122 ... P09467 19969452 MOAD: ic50=0.92uM
    5901 2wbb:E (2.22) BS01 RO3 3.1.3.11 GO:0000122 ... P09467 19969452 MOAD: ic50=0.92uM
    5902 2wbb:F (2.22) BS01 RO3 3.1.3.11 GO:0000122 ... P09467 19969452 MOAD: ic50=0.92uM
    5903 2wbb:G (2.22) BS01 RO3 3.1.3.11 GO:0000122 ... P09467 19969452 MOAD: ic50=0.92uM
    5904 2wbb:H (2.22) BS01 RO3 3.1.3.11 GO:0000122 ... P09467 19969452 MOAD: ic50=0.92uM
    5905 2wbb:H (2.22) BS02 RO3 3.1.3.11 GO:0000122 ... P09467 19969452 MOAD: ic50=0.92uM
    5906 2wbd:A (2.4) BS01 RO5 3.1.3.11 GO:0000122 ... P09467 19969452 MOAD: ic50=0.23uM
    PDBbind: -logKd/Ki=6.64, IC50=0.23uM
    BindingDB: IC50=100nM
    5907 2wbd:B (2.4) BS01 RO5 3.1.3.11 GO:0000122 ... P09467 19969452 MOAD: ic50=0.23uM
    BindingDB: IC50=100nM
    5908 2wbd:C (2.4) BS01 RO5 3.1.3.11 GO:0000122 ... P09467 19969452 MOAD: ic50=0.23uM
    PDBbind: -logKd/Ki=6.64, IC50=0.23uM
    BindingDB: IC50=100nM
    5909 2wbd:D (2.4) BS01 RO5 3.1.3.11 GO:0000122 ... P09467 19969452 MOAD: ic50=0.23uM
    BindingDB: IC50=100nM
    5910 2wbd:E (2.4) BS01 RO5 3.1.3.11 GO:0000122 ... P09467 19969452 MOAD: ic50=0.23uM
    BindingDB: IC50=100nM
    5911 2wbd:F (2.4) BS01 RO5 3.1.3.11 GO:0000122 ... P09467 19969452 MOAD: ic50=0.23uM
    BindingDB: IC50=100nM
    5912 2wbd:G (2.4) BS01 RO5 3.1.3.11 GO:0000122 ... P09467 19969452 MOAD: ic50=0.23uM
    BindingDB: IC50=100nM
    5913 2wbd:H (2.4) BS01 RO5 3.1.3.11 GO:0000122 ... P09467 19969452 MOAD: ic50=0.23uM
    BindingDB: IC50=100nM
    5914 2wbg:A (1.85) BS01 LGS 3.2.1.21 GO:0004553 ... Q08638 19532990 MOAD: Ki=35.2uM
    PDBbind: -logKd/Ki=4.45, Ki=35.2uM
    5915 2wbg:B (1.85) BS01 LGS 3.2.1.21 GO:0004553 ... Q08638 19532990 MOAD: Ki=35.2uM
    5916 2wbg:C (1.85) BS01 LGS 3.2.1.21 GO:0004553 ... Q08638 19532990 MOAD: Ki=35.2uM
    5917 2wbg:D (1.85) BS01 LGS 3.2.1.21 GO:0004553 ... Q08638 19532990 MOAD: Ki=35.2uM
    5918 2wc3:A (2.0) BS01 AM3 3.2.1.21 GO:0004553 ... Q08638 19532990 MOAD: Ki=0.83uM
    PDBbind: -logKd/Ki=6.08, Ki=0.83uM
    5919 2wc3:B (2.0) BS01 AM3 3.2.1.21 GO:0004553 ... Q08638 19532990 MOAD: Ki=0.83uM
    5920 2wc3:C (2.0) BS01 AM3 3.2.1.21 GO:0004553 ... Q08638 19532990 MOAD: Ki=0.83uM
    5921 2wc3:D (2.0) BS01 AM3 3.2.1.21 GO:0004553 ... Q08638 19532990 MOAD: Ki=0.83uM
    5922 2wc4:A (1.7) BS01 AMF 3.2.1.21 GO:0004553 ... Q08638 19532990 MOAD: Kd=5.1uM
    PDBbind: -logKd/Ki=5.29, Kd=5.1uM
    5923 2wc4:B (1.7) BS01 AMF 3.2.1.21 GO:0004553 ... Q08638 19532990 MOAD: Kd=5.1uM
    5924 2wc4:C (1.7) BS01 AMF 3.2.1.21 GO:0004553 ... Q08638 19532990 MOAD: Kd=5.1uM
    5925 2wc4:D (1.7) BS01 AMF 3.2.1.21 GO:0004553 ... Q08638 19532990 MOAD: Kd=5.1uM
    5926 2wcg:A (2.3) BS01 MT5 2.4.1.-
    3.2.1.-
    3.2.1.45
    3.2.1.46    		 GO:0004336 ... P04062 19437524 MOAD: Ki=0.42uM
    PDBbind: -logKd/Ki=6.38, Ki=0.42uM
    5927 2wcg:B (2.3) BS01 MT5 2.4.1.-
    3.2.1.-
    3.2.1.45
    3.2.1.46    		 GO:0004336 ... P04062 19437524 MOAD: Ki=0.42uM
    5928 2wcv:A (1.9) BS01 FUC 5.1.3.29
    5.4.99.62    		 GO:0005737 ... P0AEN8 19524593 MOAD: Kd=1.7mM
    5929 2wcv:B (1.9) BS01 FUC 5.1.3.29
    5.4.99.62    		 GO:0005737 ... P0AEN8 19524593 MOAD: Kd=1.7mM
    5930 2wcv:C (1.9) BS01 FUC 5.1.3.29
    5.4.99.62    		 GO:0005737 ... P0AEN8 19524593 MOAD: Kd=1.7mM
    5931 2wcv:D (1.9) BS01 FUC 5.1.3.29
    5.4.99.62    		 GO:0005737 ... P0AEN8 19524593 MOAD: Kd=1.7mM
    5932 2wcv:D (1.9) BS02 FUC 5.1.3.29
    5.4.99.62    		 GO:0005737 ... P0AEN8 19524593 MOAD: Kd=1.7mM
    5933 2wcv:E (1.9) BS01 FUC 5.1.3.29
    5.4.99.62    		 GO:0005737 ... P0AEN8 19524593 MOAD: Kd=1.7mM
    5934 2wcv:F (1.9) BS01 FUC 5.1.3.29
    5.4.99.62    		 GO:0005737 ... P0AEN8 19524593 MOAD: Kd=1.7mM
    5935 2wcv:F (1.9) BS02 FUC 5.1.3.29
    5.4.99.62    		 GO:0005737 ... P0AEN8 19524593 MOAD: Kd=1.7mM
    5936 2wcv:G (1.9) BS01 FUC 5.1.3.29
    5.4.99.62    		 GO:0005737 ... P0AEN8 19524593 MOAD: Kd=1.7mM
    5937 2wcv:H (1.9) BS01 FUC 5.1.3.29
    5.4.99.62    		 GO:0005737 ... P0AEN8 19524593 MOAD: Kd=1.7mM
    5938 2wcv:I (1.9) BS01 FUC 5.1.3.29
    5.4.99.62    		 GO:0005737 ... P0AEN8 19524593 MOAD: Kd=1.7mM
    5939 2wcv:J (1.9) BS01 FUC 5.1.3.29
    5.4.99.62    		 GO:0005737 ... P0AEN8 19524593 MOAD: Kd=1.7mM
    5940 2wcx:A (2.0) BS03 VGC 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 19672916 MOAD: ic50=0.025uM
    PDBbind: -logKd/Ki=7.60, IC50=25nM
    5941 2wd1:A (2.0) BS01 ZZY 2.7.10.1 GO:0004672 ... P08581 19369077 MOAD: ic50=82nM
    PDBbind: -logKd/Ki=7.09, IC50=82nM
    BindingDB: IC50=82nM
    5942 2wd3:A (1.8) BS01 MS4 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 20148564 MOAD: ic50=86nM
    PDBbind: -logKd/Ki=7.07, IC50=86nM
    BindingDB: IC50=86nM
    5943 2wd3:A (1.8) BS02 MS4 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 20148564 MOAD: ic50=86nM
    PDBbind: -logKd/Ki=7.07, IC50=86nM
    BindingDB: IC50=86nM
    5944 2wd7:A (1.9) BS02 VGD 1.5.1.33 GO:0000166 ... O76290 19527033 MOAD: Ki=10.6uM
    PDBbind: -logKd/Ki=4.97, Ki=10.6uM
    BindingDB: Ki=10600nM
    5945 2wd7:B (1.9) BS02 VGD 1.5.1.33 GO:0000166 ... O76290 19527033 MOAD: Ki=10.6uM
    BindingDB: Ki=10600nM
    5946 2wd7:C (1.9) BS02 VGD 1.5.1.33 GO:0000166 ... O76290 19527033 MOAD: Ki=10.6uM
    BindingDB: Ki=10600nM
    5947 2wd7:D (1.9) BS02 VGD 1.5.1.33 GO:0000166 ... O76290 19527033 MOAD: Ki=10.6uM
    BindingDB: Ki=10600nM
    5948 2wd8:A (2.1) BS02 VGF 1.5.1.33 GO:0000166 ... O76290 19527033 MOAD: Kd=10.6uM
    BindingDB: Ki=7nM
    5949 2wd8:B (2.1) BS02 VGF 1.5.1.33 GO:0000166 ... O76290 19527033 MOAD: Kd=10.6uM
    BindingDB: Ki=7nM
    5950 2wd8:C (2.1) BS01 VGF 1.5.1.33 GO:0000166 ... O76290 19527033 MOAD: Kd=10.6uM
    BindingDB: Ki=7nM
    5951 2wd8:D (2.1) BS02 VGF 1.5.1.33 GO:0000166 ... O76290 19527033 MOAD: Kd=10.6uM
    BindingDB: Ki=7nM
    5952 2wdo:A (1.56) BS01 ACO 2.7.8.7 GO:0000287 ... O86785 21595442 MOAD: Kd=2.4uM
    5953 2wds:A (1.35) BS01 COA 2.7.8.7 GO:0000287 ... O86785 21595442 MOAD: Kd=0.45uM
    5954 2wdy:A (1.4) BS01 COA 2.7.8.7 GO:0000287 ... O86785 21595442 MOAD: Kd=0.85uM
    5955 2we0:A (2.01) BS01 UMP 3.6.1.23 GO:0004170 ... P03195 19586911 MOAD: Kd=37uM
    5956 2web:A (1.5) BS01 PP4 3.4.23.20 GO:0004190 ... P00798 N/A MOAD: Ki=7.6uM
    PDBbind: -logKd/Ki=5.12, Ki=7.6uM
    5957 2wec:A (1.5) BS01 PP5 3.4.23.20 GO:0004190 ... P00798 N/A MOAD: Ki=110uM
    PDBbind: -logKd/Ki=3.96, Ki=110uM
    5958 2wed:A (1.5) BS01 PP6 3.4.23.20 GO:0004190 ... P00798 N/A MOAD: Ki=0.8uM
    PDBbind: -logKd/Ki=6.10, Ki=0.8uM
    5959 2weg:A (1.1) BS02 FBV 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19882701 MOAD: Kd=314nM
    PDBbind: -logKd/Ki=6.50, Kd=314nM
    5960 2weh:A (2.09) BS02 FB1 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19882701 MOAD: Kd=1125nM
    PDBbind: -logKd/Ki=5.95, Kd=1125nM
    5961 2wei:A (1.65) BS01 VGG 2.7.1.17 GO:0004672 ... A3FQ16 21962082 MOAD: ic50=3.4nM
    PDBbind: -logKd/Ki=8.47, IC50=3.4nM
    5962 2wej:A (1.45) BS02 FB2 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19882701 MOAD: Kd=839nM
    PDBbind: -logKd/Ki=6.08, Kd=839nM
    BindingDB: Ki=1103nM, Kd=1149700nM
    5963 2weo:A (1.4) BS02 FBW 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19882701 MOAD: Kd=118nM
    PDBbind: -logKd/Ki=6.93, Kd=118nM
    5964 2weq:A (2.2) BS01 GDM ? GO:0005524 ... P02829 19236053 MOAD: Kd=1.27uM
    PDBbind: -logKd/Ki=5.90, Kd=1.27uM
    5965 2wer:A (1.6) BS01 RDC ? GO:0005524 ... P02829 19236053 MOAD: Kd=90nM
    PDBbind: -logKd/Ki=7.05, Kd=90nM
    BindingDB: IC50=2e+2nM
    5966 2wer:B (1.6) BS01 RDC ? GO:0005524 ... P02829 19236053 MOAD: Kd=90nM
    BindingDB: IC50=2e+2nM
    5967 2wez:A (1.7) BS01 ZYE 3.4.23.46 GO:0004190 ... P56817 19428244 MOAD: ic50=0.023uM
    PDBbind: -logKd/Ki=7.64, IC50=0.023uM
    5968 2wf0:A (1.6) BS01 ZY0 3.4.23.46 GO:0004190 ... P56817 19428244 MOAD: ic50=0.21uM
    PDBbind: -logKd/Ki=6.68, IC50=0.21uM
    BindingDB: IC50=210nM
    5969 2wf1:A (1.6) BS01 ZY1 3.4.23.46 GO:0004190 ... P56817 19477642 MOAD: ic50=0.002uM
    PDBbind: -logKd/Ki=8.70, IC50=2nM
    BindingDB: IC50=2nM
    5970 2wf2:A (1.8) BS01 ZY2 3.4.23.46 GO:0004190 ... P56817 19477642 MOAD: ic50=0.026uM
    PDBbind: -logKd/Ki=7.59, IC50=26nM
    5971 2wf3:A (2.08) BS01 ZY3 3.4.23.46 GO:0004190 ... P56817 19477642 MOAD: ic50=0.019uM
    PDBbind: -logKd/Ki=7.72, IC50=19nM
    5972 2wf4:A (1.8) BS01 ZY4 3.4.23.46 GO:0004190 ... P56817 19406640 MOAD: ic50=13nM
    PDBbind: -logKd/Ki=7.89, IC50=13nM
    5973 2wfg:A (2.2) BS01 ZZB N/A GO:0000166 ... N/A 19426743 MOAD: ic50=38uM
    PDBbind: -logKd/Ki=4.42, IC50=38uM
    5974 2wgj:A (2.0) BS01 VGH 2.7.10.1 GO:0004672 ... P08581 21812414 MOAD: Ki=0.002uM
    PDBbind: -logKd/Ki=8.70, Ki=0.002uM
    BindingDB: IC50=8nM, Kd=2.0nM, Ki=2nM
    5975 2wh8:A (1.7) BS02 II2 1.14.-.- GO:0004497 ... P9WPN5 19605350 MOAD: Kd=1.08uM
    BindingDB: Kd=4.9e+3nM
    5976 2wh8:B (1.7) BS02 II2 1.14.-.- GO:0004497 ... P9WPN5 19605350 MOAD: Kd=1.08uM
    BindingDB: Kd=4.9e+3nM
    5977 2wh8:C (1.7) BS02 II2 1.14.-.- GO:0004497 ... P9WPN5 19605350 MOAD: Kd=1.08uM
    BindingDB: Kd=4.9e+3nM
    5978 2wh8:D (1.7) BS02 II2 1.14.-.- GO:0004497 ... P9WPN5 19605350 MOAD: Kd=1.08uM
    BindingDB: Kd=4.9e+3nM
    5979 2whf:A (1.58) BS02 II4 1.14.-.- GO:0004497 ... P9WPN5 19605350 MOAD: Kd=4.8uM
    BindingDB: Kd=3.26e+4nM
    5980 2whf:A (1.58) BS03 II4 1.14.-.- GO:0004497 ... P9WPN5 19605350 MOAD: Kd=4.8uM
    BindingDB: Kd=3.26e+4nM
    5981 2who:A (2.0) BS03 VGI 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 19877603 MOAD: ic50=0.02uM
    PDBbind: -logKd/Ki=7.70, IC50=20nM
    BindingDB: IC50=20nM, EC50=7100nM
    5982 2who:B (2.0) BS03 VGI 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 19877603 MOAD: ic50=0.02uM
    BindingDB: IC50=20nM, EC50=7100nM
    5983 2whp:A (2.2) BS01 HI6 3.1.1.7 GO:0001919 ... P21836 19536291 MOAD: Kd~100uM
    PDBbind: -logKd/Ki=4.00, Kd=100uM
    5984 2whp:B (2.2) BS01 HI6 3.1.1.7 GO:0001919 ... P21836 19536291 MOAD: Kd~100uM
    5985 2whw:A (2.2) BS02 1D4 1.14.15.33 GO:0004497 ... O87605 19833867 MOAD: Kd=218uM
    5986 2whw:B (2.2) BS02 1D4 1.14.15.33 GO:0004497 ... O87605 19833867 MOAD: Kd=218uM
    5987 2wi1:A (2.3) BS02 ZZ2 3.6.4.10 GO:0005524 ... P07900 19610616 MOAD: ic50>4000uM
    PDBbind: -logKd/Ki=2.40, IC50>4000uM
    5988 2wi2:A (2.09) BS01 ZZ3 3.6.4.10 GO:0005524 ... P07900 19610616 MOAD: ic50=350uM
    PDBbind: -logKd/Ki=3.46, IC50=350uM
    5989 2wi2:B (2.09) BS01 ZZ3 3.6.4.10 GO:0005524 ... P07900 19610616 MOAD: ic50=350uM
    5990 2wi3:A (1.9) BS02 ZZ3 3.6.4.10 GO:0005524 ... P07900 19610616 MOAD: ic50=350uM
    PDBbind: -logKd/Ki=3.46, IC50=350uM
    5991 2wi4:A (2.4) BS01 ZZ4 3.6.4.10 GO:0005524 ... P07900 19610616 MOAD: ic50=1.56uM
    PDBbind: -logKd/Ki=5.81, IC50=1.56uM
    5992 2wi5:A (2.1) BS01 ZZ5 3.6.4.10 GO:0005524 ... P07900 19610616 MOAD: ic50=0.9uM
    PDBbind: -logKd/Ki=6.05, IC50=0.90uM
    5993 2wi6:A (2.18) BS01 ZZ6 3.6.4.10 GO:0005524 ... P07900 19610616 MOAD: ic50=0.23uM
    PDBbind: -logKd/Ki=6.64, IC50=0.23uM
    5994 2wi7:A (2.5) BS01 2KL 3.6.4.10 GO:0005524 ... P07900 19610616 MOAD: ic50=0.058uM
    PDBbind: -logKd/Ki=7.24, IC50=58nM
    5995 2wi9:A (2.0) BS02 1D2 1.14.15.33 GO:0004497 ... O87605 19833867 MOAD: Kd=309uM
    5996 2wi9:B (2.0) BS02 1D2 1.14.15.33 GO:0004497 ... O87605 19833867 MOAD: Kd=309uM
    5997 2wih:A (2.5) BS01 P48 2.7.11.22 GO:0000082 ... P24941 19603809 MOAD: ic50=0.045uM
    PDBbind: -logKd/Ki=7.35, IC50=45nM
    BindingDB: IC50=45nM
    5998 2wih:C (2.5) BS01 P48 2.7.11.22 GO:0000082 ... P24941 19603809 MOAD: ic50=0.045uM
    BindingDB: IC50=45nM
    5999 2wk6:A (2.5) BS01 IUR 2.4.2.4 GO:0000002 ... P19971 19555658 MOAD: Ki=0.48mM
    PDBbind: -logKd/Ki=3.32, Ki=0.48mM
    6000 2wk6:B (2.5) BS01 IUR 2.4.2.4 GO:0000002 ... P19971 19555658 MOAD: Ki=0.48mM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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