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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 19354 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    5001 3hp2:A (2.15) BS01 P36 2.7.11.24 GO:0000077 ... Q16539 19751974 PDBbind: -logKd/Ki=6.17, IC50=0.68uM
    BindingDB: IC50=680nM
    5002 3hp5:A (2.3) BS01 52P 2.7.11.24 GO:0000077 ... Q16539 19751974 PDBbind: -logKd/Ki=7.15, IC50=0.07uM
    BindingDB: Kd=2.8nM, IC50=70nM, Ki=0.800000nM
    5003 3hpt:B (2.19) BS01 YET 3.4.21.6 GO:0004252 ... P00742 19541481 MOAD: Ki=6.5nM
    PDBbind: -logKd/Ki=8.19, Ki=6.5nM
    BindingDB: IC50=12nM, Ki=6.5nM
    5004 3hpt:D (2.19) BS01 YET 3.4.21.6 GO:0004252 ... P00742 19541481 MOAD: Ki=6.5nM
    BindingDB: IC50=12nM, Ki=6.5nM
    5005 3hq5:A (2.1) BS01 GKK ? N/A P06401 19595590 MOAD: ic50=16nM
    PDBbind: -logKd/Ki=7.80, IC50=16nM
    BindingDB: IC50=16nM, EC50=9nM
    5006 3hq5:B (2.1) BS01 GKK ? N/A P06401 19595590 MOAD: ic50=16nM
    BindingDB: IC50=16nM, EC50=9nM
    5007 3hqu:A (2.3) BS03 UN9 1.14.11.29 GO:0005506 ... Q9GZT9 19604478 BindingDB: IC50=300nM, EC50=79000nM, Kd=80nM
    5008 3hqw:A (1.7) BS02 PF4 3.1.4.17 GO:0004114 ... Q9QYJ6 19630403 MOAD: ic50=35nM
    PDBbind: -logKd/Ki=7.46, IC50=35nM
    BindingDB: IC50=35nM
    5009 3hqy:A (2.0) BS02 PF6 3.1.4.17 GO:0004114 ... Q9QYJ6 19630403 MOAD: ic50=11.5nM
    PDBbind: -logKd/Ki=7.94, IC50=11.5nM
    BindingDB: IC50=11.5nM
    5010 3hqz:A (1.7) BS02 PF8 3.1.4.17 GO:0004114 ... Q9QYJ6 19630403 MOAD: ic50=0.42nM
    PDBbind: -logKd/Ki=9.38, IC50=0.42nM
    BindingDB: IC50=0.42nM
    5011 3hr1:A (1.53) BS01 PF9 3.1.4.17 GO:0004114 ... Q9QYJ6 19630403 MOAD: ic50=0.37nM
    PDBbind: -logKd/Ki=9.43, IC50=0.37nM
    BindingDB: IC50=0.5nM, Ki=0.17nM
    5012 3hrb:A (2.2) BS01 I39 2.7.11.24 GO:0000077 ... Q16539 19678708 MOAD: ic50=21nM
    PDBbind: -logKd/Ki=7.68, IC50=21nM
    BindingDB: IC50=21nM
    5013 3hrf:A (1.9) BS02 P47 2.7.11.1 GO:0004672 ... O15530 19718043 MOAD: Kd=10.3uM
    PDBbind: -logKd/Ki=4.99, Kd=10.3uM
    BindingDB: Kd=10300nM, IC50=9.7e+4nM
    5014 3hs4:A (1.1) BS03 AZM 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19851004 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    BindingDB: Ki=12nM, Kd=17nM, IC50=10nM
    5015 3hs4:A (1.1) BS04 AZM 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19851004 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    BindingDB: Ki=12nM, Kd=17nM, IC50=10nM
    5016 3hs4:A (1.1) BS05 AZM 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19851004 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    BindingDB: Ki=12nM, Kd=17nM, IC50=10nM
    5017 3hub:A (2.25) BS01 469 2.7.11.24 GO:0000077 ... Q16539 20201574 MOAD: Kd=8.2nM
    PDBbind: -logKd/Ki=8.09, Kd=8.2nM
    BindingDB: IC50=9nM, Kd=0.480000nM
    5018 3hv3:A (2.0) BS01 R49 2.7.11.24 GO:0000077 ... Q16539 19928858 MOAD: ic50=900nM
    PDBbind: -logKd/Ki=6.33, IC50=470nM
    BindingDB: IC50=900nM
    5019 3hv4:A (2.6) BS01 L51 2.7.11.24 GO:0000077 ... Q16539 19928858 PDBbind: -logKd/Ki=6.51, IC50=310nM
    BindingDB: IC50=290nM
    5020 3hv4:B (2.6) BS01 L51 2.7.11.24 GO:0000077 ... Q16539 19928858 BindingDB: IC50=290nM
    5021 3hv5:A (2.25) BS01 R24 2.7.11.24 GO:0000077 ... Q16539 19928858 MOAD: ic50=150nM
    PDBbind: -logKd/Ki=7.02, IC50=95nM
    BindingDB: IC50=95nM
    5022 3hv5:B (2.25) BS01 R24 2.7.11.24 GO:0000077 ... Q16539 19928858 MOAD: ic50=150nM
    BindingDB: IC50=95nM
    5023 3hv6:A (1.95) BS01 R39 2.7.11.24 GO:0000077 ... Q16539 19928858 MOAD: ic50=5500nM
    PDBbind: -logKd/Ki=5.64, IC50=2300nM
    BindingDB: IC50=5500nM, koff=0.003900s-1, kon=13000M-1-s-1, Kd=300nM
    5024 3hv7:A (2.4) BS01 1AU 2.7.11.24 GO:0000077 ... Q16539 19928858 MOAD: Kd~12nM
    PDBbind: -logKd/Ki=7.92, Kd=12nM
    BindingDB: Kd=12nM, IC50=170nM
    5025 3hvc:A (2.1) BS01 GG5 2.7.11.24 GO:0000077 ... Q16539 19501598 MOAD: ic50=600nM
    PDBbind: -logKd/Ki=6.22, IC50=600nM
    BindingDB: Ki=600nM, IC50=67nM
    5026 3hvc:A (2.1) BS02 GG5 2.7.11.24 GO:0000077 ... Q16539 19501598 MOAD: ic50=600nM
    PDBbind: -logKd/Ki=6.22, IC50=600nM
    BindingDB: Ki=600nM, IC50=67nM
    5027 3hvg:A (2.26) BS01 EV0 3.4.23.46 GO:0004190 ... P56817 19799414 MOAD: ic50~2mM
    PDBbind: -logKd/Ki=2.70, IC50=2mM
    BindingDB: Kd=4450000nM
    5028 3hvg:B (2.26) BS01 EV0 3.4.23.46 GO:0004190 ... P56817 19799414 MOAD: ic50~2mM
    BindingDB: Kd=4450000nM
    5029 3hvg:B (2.26) BS02 EV0 3.4.23.46 GO:0004190 ... P56817 19799414 MOAD: ic50~2mM
    BindingDB: Kd=4450000nM
    5030 3hvo:A (2.0) BS01 VGI 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26661 N/A BindingDB: IC50=180nM, EC50=11000nM
    5031 3hvo:B (2.0) BS01 VGI 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26661 N/A BindingDB: IC50=180nM, EC50=11000nM
    5032 3hy7:A (1.69) BS01 097 3.4.24.- GO:0004222 ... Q9UNA0 19586907 MOAD: ic50=106nM
    PDBbind: -logKd/Ki=6.97, IC50=106nM
    BindingDB: IC50=10000nM
    5033 3hy7:B (1.69) BS01 097 3.4.24.- GO:0004222 ... Q9UNA0 19586907 MOAD: ic50=106nM
    BindingDB: IC50=10000nM
    5034 3hy9:A (2.02) BS05 098 3.4.24.- GO:0004222 ... Q9UNA0 19586907 MOAD: ic50=17nM
    PDBbind: -logKd/Ki=7.77, IC50=17nM
    BindingDB: IC50=12nM
    5035 3hy9:B (2.02) BS05 098 3.4.24.- GO:0004222 ... Q9UNA0 19586907 MOAD: ic50=17nM
    BindingDB: IC50=12nM
    5036 3hzf:A (2.5) BS01 B72 ? GO:0003677 ... P10827 18237438 BindingDB: Kd=0.44nM, Ki=1.09nM, EC50=45nM
    5037 3i06:A (1.1) BS01 QL2 3.4.22.51 GO:0006508 ... P25779 19908842 PDBbind: -logKd/Ki=9.70, IC50=0.2nM
    BindingDB: IC50=10nM
    5038 3i1y:A (2.469) BS01 33N 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 19746975 MOAD: ic50=7nM
    PDBbind: -logKd/Ki=8.15, IC50=7nM
    BindingDB: IC50=7nM
    5039 3i25:A (2.1) BS01 MV7 3.4.23.46 GO:0004190 ... P56817 20122837 MOAD: Ki=3.1nM
    PDBbind: -logKd/Ki=8.51, Ki=3.1nM
    BindingDB: Ki=3.1nM
    5040 3i25:B (2.1) BS01 MV7 3.4.23.46 GO:0004190 ... P56817 20122837 MOAD: Ki=3.1nM
    BindingDB: Ki=3.1nM
    5041 3i25:C (2.1) BS01 MV7 3.4.23.46 GO:0004190 ... P56817 20122837 MOAD: Ki=3.1nM
    BindingDB: Ki=3.1nM
    5042 3i28:A (1.95) BS01 34N 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 19746975 MOAD: ic50=6nM
    PDBbind: -logKd/Ki=8.22, IC50=6nM
    BindingDB: IC50=8nM, EC50=0.14nM
    5043 3i3d:A (2.2) BS01 IPT 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=10.3mM
    PDBbind: -logKd/Ki=1.99, Ki=10.3mM
    BindingDB: Ki=7.6e+4nM
    5044 3i3d:A (2.2) BS02 IPT 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=10.3mM
    PDBbind: -logKd/Ki=1.99, Ki=10.3mM
    BindingDB: Ki=7.6e+4nM
    5045 3i3d:B (2.2) BS01 IPT 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=10.3mM
    BindingDB: Ki=7.6e+4nM
    5046 3i3d:C (2.2) BS01 IPT 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=10.3mM
    BindingDB: Ki=7.6e+4nM
    5047 3i3d:D (2.2) BS01 IPT 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=10.3mM
    PDBbind: -logKd/Ki=1.99, Ki=10.3mM
    BindingDB: Ki=7.6e+4nM
    5048 3i3d:D (2.2) BS02 IPT 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=10.3mM
    PDBbind: -logKd/Ki=1.99, Ki=10.3mM
    BindingDB: Ki=7.6e+4nM
    5049 3i4a:A (1.898) BS01 LN5 3.5.3.18 GO:0000052 ... O94760 19663506 PDBbind: -logKd/Ki=4.28, Ki=52uM
    BindingDB: Ki=5.2e+4nM, IC50=300000nM
    5050 3i4a:B (1.898) BS01 LN5 3.5.3.18 GO:0000052 ... O94760 19663506 BindingDB: Ki=5.2e+4nM, IC50=300000nM
    5051 3i4b:A (2.3) BS01 Z48 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 19827834 MOAD: Ki=7nM
    PDBbind: -logKd/Ki=8.15, Ki=7nM
    BindingDB: Ki=7nM
    5052 3i4b:B (2.3) BS01 Z48 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 19827834 MOAD: Ki=7nM
    PDBbind: -logKd/Ki=8.15, Ki=7nM
    BindingDB: Ki=7nM
    5053 3i5n:A (2.0) BS01 B2D 2.7.10.1 GO:0004672 ... P08581 19819693 MOAD: ic50=17nM
    PDBbind: -logKd/Ki=7.85, IC50=14nM
    BindingDB: IC50=17nM
    5054 3i5z:A (2.2) BS01 Z48 2.7.11.24 GO:0000165 ... P28482 19827834 MOAD: Ki=2nM
    PDBbind: -logKd/Ki=8.70, Ki=2nM
    BindingDB: Ki=4nM
    5055 3i60:A (2.5) BS01 E86 2.7.11.24 GO:0000165 ... P28482 19827834 MOAD: Ki<2nM
    PDBbind: -logKd/Ki=8.70, Ki=2nM
    BindingDB: Ki=<2nM
    5056 3i68:A (2.4) BS01 J4Z 1.3.5.2 GO:0004152 ... Q08210 19640844 MOAD: ic50=0.056uM
    BindingDB: IC50=56nM
    5057 3i6c:A (1.3) BS01 GIA 5.2.1.8 GO:0003755 ... Q13526 20207139 MOAD: Ki=12uM
    PDBbind: -logKd/Ki=4.92, Ki=12uM
    BindingDB: Ki=12000nM, IC50=12000nM
    5058 3i6c:A (1.3) BS02 GIA 5.2.1.8 GO:0003755 ... Q13526 20207139 MOAD: Ki=12uM
    PDBbind: -logKd/Ki=4.92, Ki=12uM
    BindingDB: Ki=12000nM, IC50=12000nM
    5059 3i6c:B (1.3) BS01 GIA 5.2.1.8 GO:0003755 ... Q13526 20207139 MOAD: Ki=12uM
    BindingDB: Ki=12000nM, IC50=12000nM
    5060 3i6r:A (2.5) BS01 J5Z 1.3.5.2 GO:0004152 ... Q08210 19640844 MOAD: ic50=0.28uM
    BindingDB: IC50=280nM
    5061 3i7b:A (1.988) BS01 BK1 2.7.11.17 GO:0004672 ... Q9BJF5 20436472 MOAD: ic50=0.066uM
    PDBbind: -logKd/Ki=7.18, IC50=0.066uM
    BindingDB: IC50=128nM
    5062 3i7c:A (1.98) BS01 BK2 2.7.11.17 GO:0004672 ... Q9BJF5 20436472 MOAD: ic50=0.018uM
    PDBbind: -logKd/Ki=7.74, IC50=0.018uM
    BindingDB: IC50=15.0nM
    5063 3i7g:A (1.95) BS06 732 3.4.24.- GO:0004222 ... P45452 19692239 MOAD: ic50=430nM
    PDBbind: -logKd/Ki=6.37, IC50=430nM
    BindingDB: IC50=430nM
    5064 3i7i:A (2.208) BS06 518 3.4.24.- GO:0004222 ... P45452 19692239 MOAD: ic50=620nM
    PDBbind: -logKd/Ki=6.21, IC50=620nM
    BindingDB: IC50=620nM
    5065 3i7z:A (2.3) BS02 VO4 3.1.3.48 GO:0004725 ... P18031 20236928 BindingDB: IC50=2000nM
    5066 3i80:A (2.25) BS01 VO4 3.1.3.48 GO:0004725 ... P18031 20236928 BindingDB: IC50=2000nM
    5067 3i81:A (2.08) BS01 EBI 2.7.10.1 GO:0004672 ... P08069 19778024 MOAD: ic50=13nM
    PDBbind: -logKd/Ki=7.89, IC50=13nM
    BindingDB: IC50=2nM
    5068 3i8v:A (2.25) BS02 0MO 3.1.4.53 GO:0004114 ... P27815 N/A BindingDB: IC50=4300nM, EC50=3300nM
    5069 3i8v:B (2.25) BS02 0MO 3.1.4.53 GO:0004114 ... P27815 N/A BindingDB: IC50=4300nM, EC50=3300nM
    5070 3ia6:A (2.31) BS01 UNT ? GO:0003677 ... P37231 19783444 MOAD: ic50=0.003uM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3nM, EC50=13nM
    5071 3ia6:B (2.31) BS01 UNT ? GO:0003677 ... P37231 19783444 MOAD: ic50=0.003uM
    BindingDB: IC50=3nM, EC50=13nM
    5072 3iai:A (2.2) BS02 AZM 4.2.1.1 GO:0004089 ... Q16790 19805286 BindingDB: Ki=25nM, IC50=1520nM, Kd=20nM
    5073 3iai:B (2.2) BS02 AZM 4.2.1.1 GO:0004089 ... Q16790 19805286 BindingDB: Ki=25nM, IC50=1520nM, Kd=20nM
    5074 3iai:C (2.2) BS02 AZM 4.2.1.1 GO:0004089 ... Q16790 19805286 BindingDB: Ki=25nM, IC50=1520nM, Kd=20nM
    5075 3iai:D (2.2) BS02 AZM 4.2.1.1 GO:0004089 ... Q16790 19805286 BindingDB: Ki=25nM, IC50=1520nM, Kd=20nM
    5076 3iak:A (2.8) BS02 EV1 3.1.4.53 GO:0004114 ... Q08499 N/A BindingDB: IC50=1400nM
    5077 3ibi:A (1.93) BS02 BOW 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19731956 MOAD: Ki=2.6nM
    PDBbind: -logKd/Ki=8.59, Ki=2.6nM
    BindingDB: Ki=2.6nM
    5078 3ibl:A (1.55) BS02 O59 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19731956 MOAD: Ki=14.6nM
    PDBbind: -logKd/Ki=7.84, Ki=14.6nM
    BindingDB: Ki=14.6nM
    5079 3ibn:A (2.2) BS02 O60 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19731956 MOAD: Ki=24.5nM
    PDBbind: -logKd/Ki=7.61, Ki=24.5nM
    BindingDB: Ki=24.5nM
    5080 3ibu:A (1.41) BS02 O48 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19731956 MOAD: Ki=0.7nM
    PDBbind: -logKd/Ki=9.15, Ki=0.7nM
    BindingDB: Ki=0.7nM
    5081 3id8:A (2.4) BS02 MRK 2.7.1.1 GO:0001678 ... P35557 22101819 BindingDB: EC50=67.11nM, Kd=360nM
    5082 3idp:A (2.7) BS01 L1E 2.7.11.1 GO:0004672 ... P15056 19764794 BindingDB: Ki=1nM, IC50=2nM
    5083 3idp:B (2.7) BS01 L1E 2.7.11.1 GO:0004672 ... P15056 19764794 PDBbind: -logKd/Ki=8.80, IC50=1.6nM
    BindingDB: Ki=1nM, IC50=2nM
    5084 3ie3:A (1.8) BS02 N11 2.5.1.18 GO:0000302 ... P09211 19808963 MOAD: Kd=0.21uM
    PDBbind: -logKd/Ki=6.68, Kd=0.21uM
    BindingDB: IC50=800nM
    5085 3ie3:B (1.8) BS02 N11 2.5.1.18 GO:0000302 ... P09211 19808963 MOAD: Kd=0.21uM
    BindingDB: IC50=800nM
    5086 3iej:A (2.18) BS01 599 3.4.22.27 GO:0006508 ... P25774 19773165 MOAD: ic50=0.22uM
    PDBbind: -logKd/Ki=6.66, IC50=0.22uM
    BindingDB: IC50=220nM
    5087 3iej:B (2.18) BS01 599 3.4.22.27 GO:0006508 ... P25774 19773165 MOAD: ic50=0.22uM
    BindingDB: IC50=220nM
    5088 3ig6:B (1.83) BS02 438 3.4.21.73 GO:0004252 ... P00749 19703768 MOAD: ic50=0.025uM
    PDBbind: -logKd/Ki=7.60, IC50=0.025uM
    BindingDB: IC50=25nM
    5089 3ig6:B (1.83) BS03 438 3.4.21.73 GO:0004252 ... P00749 19703768 MOAD: ic50=0.025uM
    PDBbind: -logKd/Ki=7.60, IC50=0.025uM
    BindingDB: IC50=25nM
    5090 3ig6:D (1.83) BS02 438 3.4.21.73 GO:0004252 ... P00749 19703768 MOAD: ic50=0.025uM
    BindingDB: IC50=25nM
    5091 3ig6:D (1.83) BS03 438 3.4.21.73 GO:0004252 ... P00749 19703768 MOAD: ic50=0.025uM
    BindingDB: IC50=25nM
    5092 3igb:A (2.238) BS01 454 3.4.23.46 GO:0004190 ... P56817 19757823 MOAD: ic50=38uM
    PDBbind: -logKd/Ki=4.42, IC50=38uM
    BindingDB: IC50=38000nM, EC50=16000nM
    5093 3ii5:A (2.79) BS01 831 2.7.11.1 GO:0004672 ... P15056 19864136 PDBbind: -logKd/Ki=7.62, IC50=0.024uM
    BindingDB: IC50=24nM
    5094 3ii5:B (2.79) BS01 831 2.7.11.1 GO:0004672 ... P15056 19864136 BindingDB: IC50=24nM
    5095 3iit:A (1.8) BS03 D14 3.4.21.6 GO:0004252 ... P00742 19900814 MOAD: ic50=9.5nM
    PDBbind: -logKd/Ki=8.02, IC50=9.5nM
    BindingDB: IC50=9.5nM
    5096 3ijz:A (2.21) BS01 15C 2.1.1.45 GO:0004799 ... P00469 21696158 PDBbind: -logKd/Ki=5.22, Ki=6uM
    BindingDB: Ki=6000nM
    5097 3ik0:A (2.1) BS01 7C1 2.1.1.45 GO:0004799 ... P00469 21696158 BindingDB: Ki=9000nM
    5098 3ik1:A (2.25) BS01 20C 2.1.1.45 GO:0004799 ... P00469 21696158 PDBbind: -logKd/Ki=4.85, Ki=14uM
    BindingDB: Ki=14000nM
    5099 3ika:A (2.9) BS01 0UN 2.7.10.1 GO:0004672 ... P00533 20033049 PDBbind: -logKd/Ki=7.85, IC50=14nM
    BindingDB: IC50=<1nM, Kd=1.2nM, EC50=68nM
    5100 3ikd:A (2.0) BS01 J9Z 5.2.1.8 GO:0003755 ... Q13526 19729306 PDBbind: -logKd/Ki=6.75, Ki=0.179uM
    BindingDB: IC50=180nM, Ki=179nM
    5101 3ikd:B (2.0) BS01 J9Z 5.2.1.8 GO:0003755 ... Q13526 19729306 BindingDB: IC50=180nM, Ki=179nM
    5102 3ikf:A (2.07) BS02 717 4.6.1.12 GO:0008299 ... Q63T71 21359640 BindingDB: Kd=135000nM
    5103 3ikf:B (2.07) BS01 717 4.6.1.12 GO:0008299 ... Q63T71 21359640 BindingDB: Kd=135000nM
    5104 3ikf:B (2.07) BS03 717 4.6.1.12 GO:0008299 ... Q63T71 21359640 BindingDB: Kd=135000nM
    5105 3ikf:C (2.07) BS01 717 4.6.1.12 GO:0008299 ... Q63T71 21359640 BindingDB: Kd=135000nM
    5106 3ikf:C (2.07) BS02 717 4.6.1.12 GO:0008299 ... Q63T71 21359640 BindingDB: Kd=135000nM
    5107 3il5:A (2.6) BS01 B82 2.3.1.180 GO:0004315 ... Q820T1 19665020 PDBbind: -logKd/Ki=5.80, IC50=1.6uM
    BindingDB: IC50=1600nM
    5108 3il5:B (2.6) BS01 B82 2.3.1.180 GO:0004315 ... Q820T1 19665020 PDBbind: -logKd/Ki=5.80, IC50=1.6uM
    BindingDB: IC50=1600nM
    5109 3il5:C (2.6) BS01 B82 2.3.1.180 GO:0004315 ... Q820T1 19665020 BindingDB: IC50=1600nM
    5110 3il5:D (2.6) BS01 B82 2.3.1.180 GO:0004315 ... Q820T1 19665020 BindingDB: IC50=1600nM
    5111 3il6:A (2.5) BS01 B83 2.3.1.180 GO:0004315 ... Q820T1 19665020 MOAD: ic50=0.27uM
    PDBbind: -logKd/Ki=6.57, IC50=0.27uM
    BindingDB: IC50=270nM
    5112 3ilz:A (1.85) BS01 B72 ? GO:0003677 ... P10827 18237438 BindingDB: Kd=0.44nM, Ki=1.09nM, EC50=45nM
    5113 3imc:A (1.6) BS01 BZ3 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=1100uM
    PDBbind: -logKd/Ki=2.96, Kd=1100uM
    BindingDB: Kd=1100000nM
    5114 3imc:B (1.6) BS01 BZ3 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=1100uM
    BindingDB: Kd=1100000nM
    5115 3ime:A (2.39) BS01 BZ2 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=1000uM
    PDBbind: -logKd/Ki=3.00, Kd=1000uM
    BindingDB: Kd=1000000nM
    5116 3ime:B (2.39) BS01 BZ2 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=1000uM
    BindingDB: Kd=1000000nM
    5117 3img:A (1.8) BS01 BZ2 6.3.2.1 GO:0000287 ... P9WIL5 19780086 BindingDB: Kd=1000000nM
    5118 3img:A (1.8) BS02 BZ3 6.3.2.1 GO:0000287 ... P9WIL5 19780086 PDBbind: -logKd/Ki=2.96, Kd=1.1mM
    BindingDB: Kd=1100000nM
    5119 3img:B (1.8) BS01 BZ2 6.3.2.1 GO:0000287 ... P9WIL5 19780086 BindingDB: Kd=1000000nM
    5120 3img:B (1.8) BS02 BZ3 6.3.2.1 GO:0000287 ... P9WIL5 19780086 BindingDB: Kd=1100000nM
    5121 3imy:A (2.55) BS01 B72 ? GO:0003677 ... P10828 18237438 PDBbind: -logKd/Ki=9.70, Kd=0.2nM
    BindingDB: Kd=0.1nM, Ki=0.32nM, EC50=2.82nM
    5122 3in3:A (2.0) BS01 472 3.4.23.46 GO:0004190 ... P56817 20045648 MOAD: ic50=0.06uM
    PDBbind: -logKd/Ki=7.22, IC50=0.06uM
    BindingDB: IC50=60nM
    5123 3ind:A (2.246) BS01 593 3.4.23.46 GO:0004190 ... P56817 19968289 MOAD: ic50=1.53uM
    PDBbind: -logKd/Ki=5.82, IC50=1.53uM
    BindingDB: IC50=1530nM, EC50=930nM
    5124 3ine:A (1.996) BS01 X17 3.4.23.46 GO:0004190 ... P56817 19968289 MOAD: ic50=0.17uM
    PDBbind: -logKd/Ki=6.77, IC50=0.17uM
    BindingDB: EC50=130nM, IC50=170nM
    5125 3inf:A (1.852) BS01 X45 3.4.23.46 GO:0004190 ... P56817 19968289 MOAD: ic50=0.04uM
    PDBbind: -logKd/Ki=7.40, IC50=0.04uM
    BindingDB: IC50=40nM, EC50=120nM
    5126 3inh:A (1.8) BS01 569 3.4.23.46 GO:0004190 ... P56817 19968289 MOAD: ic50=0.02uM
    PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    BindingDB: IC50=20nM, EC50=270nM
    5127 3inq:A (2.0) BS01 X0J ? GO:0042981 ... Q07817 19726685 BindingDB: IC50=11nM
    5128 3inq:B (2.0) BS01 X0J ? GO:0042981 ... Q07817 19726685 BindingDB: IC50=11nM
    5129 3io7:A (2.6) BS01 1P5 2.7.10.2 GO:0004672 ... O60674 19857967 PDBbind: -logKd/Ki=7.77, Ki=0.017uM
    BindingDB: Ki=7nM, IC50=>20000nM
    5130 3iob:A (1.8) BS01 A4D 6.3.2.1 GO:0000287 ... P9WIL5 19827080 MOAD: Kd=380uM
    PDBbind: -logKd/Ki=3.42, Kd=380uM
    BindingDB: Kd=3.80e+5nM
    5131 3iob:B (1.8) BS01 A4D 6.3.2.1 GO:0000287 ... P9WIL5 19827080 MOAD: Kd=380uM
    BindingDB: Kd=3.80e+5nM
    5132 3ioc:A (2.5) BS01 A5D 6.3.2.1 GO:0000287 ... P9WIL5 19827080 MOAD: Kd=210uM
    PDBbind: -logKd/Ki=3.68, Kd=210uM
    BindingDB: Kd=210000nM
    5133 3ioc:B (2.5) BS01 A5D 6.3.2.1 GO:0000287 ... P9WIL5 19827080 MOAD: Kd=210uM
    BindingDB: Kd=210000nM
    5134 3iod:A (1.75) BS01 A6D 6.3.2.1 GO:0000287 ... P9WIL5 19827080 MOAD: Kd=80uM
    PDBbind: -logKd/Ki=4.10, Kd=80uM
    BindingDB: Kd=80000nM
    5135 3iod:B (1.75) BS01 A6D 6.3.2.1 GO:0000287 ... P9WIL5 19827080 MOAD: Kd=80uM
    BindingDB: Kd=80000nM
    5136 3iof:A (1.44) BS02 IFS 3.5.2.6 GO:0008270 ... P26918 20527888 MOAD: Ki=6uM
    PDBbind: -logKd/Ki=5.22, Ki=6uM
    BindingDB: Ki=2000nM
    5137 3iog:A (1.41) BS02 SDF 3.5.2.6 GO:0008270 ... P26918 20527888 MOAD: Ki=3uM
    PDBbind: -logKd/Ki=5.52, Ki=3uM
    BindingDB: Ki=5000nM
    5138 3ion:A (2.4) BS01 8H1 2.7.11.1 GO:0004672 ... O15530 20074837 MOAD: ic50=8nM
    PDBbind: -logKd/Ki=8.10, IC50=8nM
    BindingDB: IC50=8nM
    5139 3iop:A (2.2) BS01 8I1 2.7.11.1 GO:0004672 ... O15530 20074837 MOAD: ic50=17nM
    PDBbind: -logKd/Ki=7.77, IC50=17nM
    BindingDB: IC50=17nM
    5140 3iph:A (2.1) BS01 G11 2.7.11.24 GO:0000077 ... Q16539 19772287 MOAD: Ki=0.0000251mM
    PDBbind: -logKd/Ki=7.60, Ki=25.1nM
    BindingDB: IC50=316.23nM, Ki=25.12nM
    5141 3ipq:A (2.0) BS02 965 ? GO:0003677 ... Q13133 20382159 MOAD: Ki=27nM
    PDBbind: -logKd/Ki=7.57, Ki=27nM
    BindingDB: EC50=200nM, IC50=235nM
    5142 3ips:A (2.26) BS02 O90 ? GO:0003677 ... Q13133 20382159 MOAD: Ki=64nM
    PDBbind: -logKd/Ki=7.19, Ki=64nM
    BindingDB: EC50=35nM, IC50=32nM
    5143 3ips:B (2.26) BS02 O90 ? GO:0003677 ... Q13133 20382159 MOAD: Ki=64nM
    BindingDB: EC50=35nM, IC50=32nM
    5144 3ipx:A (2.0) BS02 B86 2.7.1.113
    2.7.1.74
    2.7.1.76    		 GO:0004136 ... P27707 19836232 MOAD: ic50=120nM
    PDBbind: -logKd/Ki=6.92, IC50=120nM
    BindingDB: IC50=>4000nM
    5145 3ipy:A (2.54) BS01 B87 2.7.1.113
    2.7.1.74
    2.7.1.76    		 GO:0004136 ... P27707 19836232 BindingDB: IC50=510nM
    5146 3ipy:A (2.54) BS02 B87 2.7.1.113
    2.7.1.74
    2.7.1.76    		 GO:0004136 ... P27707 19836232 BindingDB: IC50=510nM
    5147 3ipy:B (2.54) BS01 B87 2.7.1.113
    2.7.1.74
    2.7.1.76    		 GO:0004136 ... P27707 19836232 BindingDB: IC50=510nM
    5148 3ipy:B (2.54) BS02 B87 2.7.1.113
    2.7.1.74
    2.7.1.76    		 GO:0004136 ... P27707 19836232 BindingDB: IC50=510nM
    5149 3isd:A (2.6) BS08 F2A 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 19759017 BindingDB: Ki=5000nM
    5150 3itz:A (2.25) BS01 P66 2.7.11.24 GO:0000077 ... Q16539 20138761 MOAD: ic50=1.4nM
    PDBbind: -logKd/Ki=8.85, IC50=1.4nM
    BindingDB: IC50=1.4nM, Ki=1.000000nM
    5151 3iub:A (1.5) BS01 FG2 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=29uM
    PDBbind: -logKd/Ki=4.54, Kd=29uM
    BindingDB: Kd=29000nM
    5152 3iub:A (1.5) BS02 FG2 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=29uM
    PDBbind: -logKd/Ki=4.54, Kd=29uM
    BindingDB: Kd=29000nM
    5153 3iub:B (1.5) BS01 FG2 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=29uM
    BindingDB: Kd=29000nM
    5154 3iue:A (1.73) BS01 FG3 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=1.5uM
    PDBbind: -logKd/Ki=5.82, Kd=1.5uM
    BindingDB: Kd=1500nM
    5155 3iue:A (1.73) BS02 FG3 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=1.5uM
    PDBbind: -logKd/Ki=5.82, Kd=1.5uM
    BindingDB: Kd=1500nM
    5156 3iue:B (1.73) BS01 FG3 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=1.5uM
    BindingDB: Kd=1500nM
    5157 3ivh:A (1.8) BS01 1LI 3.4.23.46 GO:0004190 ... P56817 19811916 MOAD: ic50=47nM
    PDBbind: -logKd/Ki=7.33, IC50=47nM
    BindingDB: IC50=47nM
    5158 3ivx:A (1.73) BS01 FG6 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=1.8uM
    PDBbind: -logKd/Ki=5.74, Kd=1.8uM
    BindingDB: Kd=1800nM
    5159 3ivx:A (1.73) BS02 FG6 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=1.8uM
    PDBbind: -logKd/Ki=5.74, Kd=1.8uM
    BindingDB: Kd=1800nM
    5160 3ivx:B (1.73) BS01 FG6 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=1.8uM
    BindingDB: Kd=1800nM
    5161 3iw4:A (2.8) BS01 LW4 2.7.11.13 GO:0004672 ... P17252 19827831 PDBbind: -logKd/Ki=8.68, IC50=2.1nM
    BindingDB: IC50=2.1nM
    5162 3iw4:B (2.8) BS01 LW4 2.7.11.13 GO:0004672 ... P17252 19827831 BindingDB: IC50=2.1nM
    5163 3iw4:C (2.8) BS01 LW4 2.7.11.13 GO:0004672 ... P17252 19827831 BindingDB: IC50=2.1nM
    5164 3iwe:A (1.79) BS02 646 2.3.1.-
    2.3.1.97    		 GO:0004379 ... P30419 N/A BindingDB: Ki=11nM, IC50=4.0nM
    5165 3iwe:B (1.79) BS02 646 2.3.1.-
    2.3.1.97    		 GO:0004379 ... P30419 N/A BindingDB: Ki=11nM, IC50=4.0nM
    5166 3iww:A (2.3) BS04 YZE 3.4.17.21 GO:0004180 ... Q04609 19897367 MOAD: Ki=11nM
    PDBbind: -logKd/Ki=7.96, Ki=11nM
    BindingDB: Ki=11nM
    5167 3ix2:A (2.1) BS02 AC2 2.4.2.1 GO:0003824 ... P9WP01 22033138 BindingDB: Kd=12589nM
    5168 3ix2:B (2.1) BS02 AC2 2.4.2.1 GO:0003824 ... P9WP01 22033138 BindingDB: Kd=12589nM
    5169 3ix2:C (2.1) BS02 AC2 2.4.2.1 GO:0003824 ... P9WP01 22033138 BindingDB: Kd=12589nM
    5170 3ix3:A (1.4) BS01 OHN ? N/A P25084 N/A BindingDB: EC50=139nM
    5171 3ix3:B (1.4) BS01 OHN ? N/A P25084 N/A BindingDB: EC50=139nM
    5172 3ix4:A (1.8) BS01 TX1 ? N/A P25084 19778724 BindingDB: EC50=28nM
    5173 3ix4:B (1.8) BS01 TX1 ? N/A P25084 19778724 BindingDB: EC50=28nM
    5174 3ix4:C (1.8) BS01 TX1 ? N/A P25084 19778724 BindingDB: EC50=28nM
    5175 3ix4:D (1.8) BS01 TX1 ? N/A P25084 19778724 BindingDB: EC50=28nM
    5176 3ix4:E (1.8) BS01 TX1 ? N/A P25084 19778724 BindingDB: EC50=28nM
    5177 3ix4:F (1.8) BS01 TX1 ? N/A P25084 19778724 BindingDB: EC50=28nM
    5178 3ix4:G (1.8) BS01 TX1 ? N/A P25084 19778724 BindingDB: EC50=28nM
    5179 3ix4:H (1.8) BS01 TX1 ? N/A P25084 19778724 BindingDB: EC50=28nM
    5180 3ixb:A (1.63) BS01 BZB 3.5.2.6 GO:0008800 ... P00811 19913034 BindingDB: IC50=200nM, Ki=27nM
    5181 3ixb:B (1.63) BS01 BZB 3.5.2.6 GO:0008800 ... P00811 19913034 BindingDB: IC50=200nM, Ki=27nM
    5182 3ixg:B (2.14) BS01 BZB 3.5.2.6 GO:0008800 ... P00811 19913034 PDBbind: -logKd/Ki=7.57, Ki=27nM
    BindingDB: IC50=200nM, Ki=27nM
    5183 3ixj:A (2.2) BS01 586 3.4.23.46 GO:0004190 ... P56817 20128595 MOAD: ic50=0.32nM
    PDBbind: -logKd/Ki=9.49, IC50=0.32nM
    BindingDB: Ki=<1nM, IC50=0.320000nM
    5184 3ixj:B (2.2) BS01 586 3.4.23.46 GO:0004190 ... P56817 20128595 MOAD: ic50=0.32nM
    BindingDB: Ki=<1nM, IC50=0.320000nM
    5185 3ixj:C (2.2) BS01 586 3.4.23.46 GO:0004190 ... P56817 20128595 MOAD: ic50=0.32nM
    BindingDB: Ki=<1nM, IC50=0.320000nM
    5186 3ixk:A (2.5) BS01 929 3.4.23.46 GO:0004190 ... P56817 20036448 MOAD: ic50=6.6nM
    PDBbind: -logKd/Ki=8.18, IC50=6.6nM
    BindingDB: IC50=4500nM
    5187 3ixk:B (2.5) BS01 929 3.4.23.46 GO:0004190 ... P56817 20036448 MOAD: ic50=6.6nM
    BindingDB: IC50=4500nM
    5188 3ixk:C (2.5) BS01 929 3.4.23.46 GO:0004190 ... P56817 20036448 MOAD: ic50=6.6nM
    BindingDB: IC50=4500nM
    5189 3j6g:B (5.5) BS02 TA1 ? GO:0000226 ... P02554 24855948 BindingDB: EC50=520nM
    5190 3j6g:D (5.5) BS02 TA1 ? GO:0000226 ... P02554 24855948 BindingDB: EC50=520nM
    5191 3j6g:F (5.5) BS02 TA1 ? GO:0000226 ... P02554 24855948 BindingDB: EC50=520nM
    5192 3j6g:H (5.5) BS02 TA1 ? GO:0000226 ... P02554 24855948 BindingDB: EC50=520nM
    5193 3j6g:J (5.5) BS02 TA1 ? GO:0000226 ... P02554 24855948 BindingDB: EC50=520nM
    5194 3j6g:L (5.5) BS02 TA1 ? GO:0000226 ... P02554 24855948 BindingDB: EC50=520nM
    5195 3j6g:N (5.5) BS02 TA1 ? GO:0000226 ... P02554 24855948 BindingDB: EC50=520nM
    5196 3j6g:P (5.5) BS02 TA1 ? GO:0000226 ... P02554 24855948 BindingDB: EC50=520nM
    5197 3j6g:R (5.5) BS02 TA1 ? GO:0000226 ... P02554 24855948 BindingDB: EC50=520nM
    5198 3j6p:B (8.2) BS02 TA1 ? GO:0000226 ... P02554 25583999 BindingDB: EC50=520nM
    5199 3jpv:A (2.35) BS02 1DR 2.7.11.1 GO:0004672 ... P11309 19788246 MOAD: ic50=0.12uM
    PDBbind: -logKd/Ki=6.92, IC50=0.12uM
    BindingDB: IC50=120nM
    5200 3jsi:A (2.72) BS02 WTC 3.1.4.35 GO:0004114 ... O76083 19919087 PDBbind: -logKd/Ki=8.68, IC50=2.1nM
    BindingDB: IC50=2.1nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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