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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    19601 3vgw:B (1.6) BS01 NVZ ? GO:0005576 ... P02701 22035795 MOAD: Ka=200000M^-1
    19602 3vgw:C (1.6) BS01 NVZ ? GO:0005576 ... P02701 22035795 MOAD: Ka=200000M^-1
    19603 3vgw:D (1.6) BS01 NVZ ? GO:0005576 ... P02701 22035795 MOAD: Ka=200000M^-1
    19604 3vgw:E (1.6) BS01 NVZ ? GO:0005576 ... P02701 22035795 MOAD: Ka=200000M^-1
    19605 3vgw:F (1.6) BS01 NVZ ? GO:0005576 ... P02701 22035795 MOAD: Ka=200000M^-1
    19606 3vgw:G (1.6) BS01 NVZ ? GO:0005576 ... P02701 22035795 MOAD: Ka=200000M^-1
    19607 3vgw:H (1.6) BS01 NVZ ? GO:0005576 ... P02701 22035795 MOAD: Ka=200000M^-1
    19608 3vh9:A (1.29) BS03 HQY 3.4.11.10 GO:0006508 ... Q01693 22311113 MOAD: Ki=0.58uM
    PDBbind: -logKd/Ki=6.24, Ki=0.58uM
    19609 3vha:A (1.39) BS01 VHA 3.6.4.10 GO:0005524 ... P07900 22192591 MOAD: Kd=40nM
    PDBbind: -logKd/Ki=7.40, Kd=40nM
    BindingDB: Kd=40nM
    19610 3vhc:A (1.41) BS01 VHC 3.6.4.10 GO:0005524 ... P07900 22192591 MOAD: Kd=1.3nM
    PDBbind: -logKd/Ki=8.89, Kd=1.3nM
    BindingDB: Kd=1.3nM
    19611 3vhd:A (1.52) BS01 VHE 3.6.4.10 GO:0005524 ... P07900 22192591 MOAD: Kd=0.52nM
    PDBbind: -logKd/Ki=9.28, Kd=0.52nM
    BindingDB: Kd=0.52nM
    19612 3vhd:B (1.52) BS01 VHE 3.6.4.10 GO:0005524 ... P07900 22192591 MOAD: Kd=0.52nM
    BindingDB: Kd=0.52nM
    19613 3vhe:A (1.55) BS01 42Q 2.7.10.1 GO:0004672 ... P35968 20833055 MOAD: ic50=6.2nM
    PDBbind: -logKd/Ki=8.21, IC50=6.2nM
    BindingDB: Ki=4.6nM, Kd=19nM, IC50=4.7nM
    19614 3vhh:A (2.26) BS01 VHH ? GO:0005576 ... P02701 22035795 MOAD: Ka=400000000M^-1
    19615 3vhh:B (2.26) BS01 VHH ? GO:0005576 ... P02701 22035795 MOAD: Ka=400000000M^-1
    19616 3vhh:C (2.26) BS01 VHH ? GO:0005576 ... P02701 22035795 MOAD: Ka=400000000M^-1
    19617 3vhh:D (2.26) BS01 VHH ? GO:0005576 ... P02701 22035795 MOAD: Ka=400000000M^-1
    19618 3vhi:A (1.76) BS01 VHI ? GO:0005576 ... P02701 22035795 MOAD: Ka=2300000M^-1
    19619 3vhi:B (1.76) BS01 VHI ? GO:0005576 ... P02701 22035795 MOAD: Ka=2300000M^-1
    19620 3vhi:C (1.76) BS01 VHI ? GO:0005576 ... P02701 22035795 MOAD: Ka=2300000M^-1
    19621 3vhi:D (1.76) BS01 VHI ? GO:0005576 ... P02701 22035795 MOAD: Ka=2300000M^-1
    19622 3vhk:A (2.49) BS01 BPK 2.7.10.1 GO:0004672 ... P35968 24900475 PDBbind: -logKd/Ki=4.60, Ki=25uM
    BindingDB: Ki=25000nM, IC50=100000nM
    19623 3vhm:A (2.0) BS01 NPK ? GO:0005576 ... P02701 22035795 MOAD: Ka=15000M^-1
    19624 3vhm:B (2.0) BS01 NPK ? GO:0005576 ... P02701 22035795 MOAD: Ka=15000M^-1
    19625 3vhm:C (2.0) BS01 NPK ? GO:0005576 ... P02701 22035795 MOAD: Ka=15000M^-1
    19626 3vhm:C (2.0) BS02 NPK ? GO:0005576 ... P02701 22035795 MOAD: Ka=15000M^-1
    19627 3vhm:D (2.0) BS01 NPK ? GO:0005576 ... P02701 22035795 MOAD: Ka=15000M^-1
    19628 3vhu:A (2.11) BS01 SNL ? N/A P08235 22074142 MOAD: ic50=49nM
    PDBbind: -logKd/Ki=7.31, IC50=49nM
    BindingDB: IC50=11nM, Ki=2.323nM
    19629 3vhv:A (1.35) BS01 LD1 ? N/A P08235 22074142 MOAD: ic50=510nM
    PDBbind: -logKd/Ki=6.29, IC50=510nM
    BindingDB: IC50=510nM
    19630 3vi2:A (2.1) BS01 HMZ 4.1.1.23 GO:0004590 ... Q8T6J6 22740703 PDBbind: -logKd/Ki=3.77, IC50=170uM
    19631 3vi2:B (2.1) BS01 HMZ 4.1.1.23 GO:0004590 ... Q8T6J6 22740703 PDBbind: -logKd/Ki=3.77, IC50=170uM
    19632 3vi5:D (2.0) BS01 M4M 2.5.1.18
    5.3.99.2    		 GO:0000287 ... O60760 22418579 PDBbind: -logKd/Ki=5.68, IC50=2.1uM
    19633 3vi7:A (2.0) BS02 CBD 2.5.1.18
    5.3.99.2    		 GO:0000287 ... O60760 22418579 PDBbind: -logKd/Ki=7.39, IC50=40.4nM
    BindingDB: IC50=2E2nM
    19634 3vi7:B (2.0) BS02 CBD 2.5.1.18
    5.3.99.2    		 GO:0000287 ... O60760 22418579 BindingDB: IC50=2E2nM
    19635 3vi8:A (1.75) BS01 13M ? GO:0003677 ... Q07869 22185225 BindingDB: EC50=12nM
    19636 3vid:A (2.3) BS01 4TT 2.7.10.1 GO:0004672 ... P35968 24900475 PDBbind: -logKd/Ki=6.21, IC50=620nM
    19637 3vjc:A (1.89) BS01 ZGA 2.5.1.21 GO:0004310 ... P37268 22474324 PDBbind: -logKd/Ki=7.72, Kd=18.9nM
    BindingDB: IC50=5nM
    19638 3vjc:B (1.89) BS01 ZGA 2.5.1.21 GO:0004310 ... P37268 22474324 PDBbind: -logKd/Ki=7.72, Kd=18.9nM
    BindingDB: IC50=5nM
    19639 3vjc:C (1.89) BS01 ZGA 2.5.1.21 GO:0004310 ... P37268 22474324 BindingDB: IC50=5nM
    19640 3vjc:D (1.89) BS01 ZGA 2.5.1.21 GO:0004310 ... P37268 22474324 BindingDB: IC50=5nM
    19641 3vjc:E (1.89) BS01 ZGA 2.5.1.21 GO:0004310 ... P37268 22474324 BindingDB: IC50=5nM
    19642 3vjc:F (1.89) BS01 ZGA 2.5.1.21 GO:0004310 ... P37268 22474324 BindingDB: IC50=5nM
    19643 3vje:A (2.12) BS01 ZGA 2.5.1.96 GO:0003824 ... A9JQL9 22474324 PDBbind: -logKd/Ki=8.01, Kd=9.7nM
    19644 3vjk:A (2.49) BS01 M51 3.4.14.5 GO:0001618 ... P27487 22959556 MOAD: ic50=0.37nM
    PDBbind: -logKd/Ki=9.43, IC50=0.37nM
    BindingDB: Kd=12nM, IC50=0.37nM
    19645 3vjk:B (2.49) BS01 M51 3.4.14.5 GO:0001618 ... P27487 22959556 MOAD: ic50=0.37nM
    BindingDB: Kd=12nM, IC50=0.37nM
    19646 3vjl:A (2.393) BS01 W94 3.4.14.5 GO:0001618 ... P27487 22959556 MOAD: ic50=5.6nM
    PDBbind: -logKd/Ki=8.25, IC50=5.6nM
    BindingDB: IC50=5.6nM
    19647 3vjl:B (2.393) BS01 W94 3.4.14.5 GO:0001618 ... P27487 22959556 MOAD: ic50=5.6nM
    BindingDB: IC50=5.6nM
    19648 3vjm:A (2.1) BS01 W61 3.4.14.5 GO:0001618 ... P27487 22824762 MOAD: ic50=0.37nM
    PDBbind: -logKd/Ki=9.43, IC50=0.37nM
    BindingDB: IC50=0.37nM
    19649 3vjm:B (2.1) BS01 W61 3.4.14.5 GO:0001618 ... P27487 22824762 MOAD: ic50=0.37nM
    BindingDB: IC50=0.37nM
    19650 3vjs:A (1.93) BS02 10S ? GO:0003677 ... P13053 22066785 MOAD: ic50=0.64uM
    PDBbind: -logKd/Ki=6.19, IC50=0.64uM
    19651 3vjt:A (2.0) BS02 10R ? GO:0003677 ... P13053 22066785 MOAD: ic50=4.1uM
    PDBbind: -logKd/Ki=5.39, IC50=4.1uM
    19652 3vn2:A (2.18) BS02 TLS ? GO:0003677 ... P37231 22357520 BindingDB: EC50=1520nM, IC50=12200nM
    19653 3vng:A (2.1) BS01 FUU ? N/A Q14145 N/A BindingDB: Kd=100000nM
    19654 3vnh:A (2.1) BS01 FUU ? N/A Q14145 N/A BindingDB: Kd=100000nM
    19655 3vnt:A (1.64) BS01 0JA 2.7.10.1 GO:0004672 ... P35968 22376051 MOAD: ic50=2.2nM
    PDBbind: -logKd/Ki=8.66, IC50=2.2nM
    19656 3vo3:A (1.52) BS01 0KF 2.7.10.1 GO:0004672 ... P35968 23498918 MOAD: ic50=1.4nM
    PDBbind: -logKd/Ki=8.85, IC50=1.4nM
    BindingDB: IC50=1.8nM
    19657 3vok:A (2.0) BS01 dna ? GO:0003677 ... Q9CHR1 22798069 PDBbind: Kd=0.2nM
    19658 3voz:A (2.4) BS01 04A 3.5.1.2 GO:0004359 ... O94925 22538822 MOAD: ic50=0.14uM
    PDBbind: -logKd/Ki=6.85, IC50=0.14uM
    BindingDB: IC50=100nM, Kd=200nM
    19659 3vp1:A (2.3) BS01 04A 3.5.1.2 GO:0004359 ... O94925 22538822 PDBbind: -logKd/Ki=5.48, IC50=3.3uM
    BindingDB: IC50=100nM, Kd=200nM
    19660 3vp2:A (2.7) BS01 BP0 3.5.1.2 GO:0004359 ... O94925 22538822 PDBbind: -logKd/Ki=5.10, IC50=8.02uM
    BindingDB: IC50=100000nM
    19661 3vp3:A (2.7) BS01 BP8 3.5.1.2 GO:0004359 ... O94925 22538822 PDBbind: -logKd/Ki=4.95, IC50=11.1uM
    19662 3vp4:A (2.45) BS01 BP9 3.5.1.2 GO:0004359 ... O94925 22538822 PDBbind: -logKd/Ki=4.73, IC50=18.6uM
    19663 3vqh:A (1.95) BS02 IQB 2.7.11.11 GO:0000287 ... P17612 22869112 PDBbind: -logKd/Ki=5.92, IC50=1.2uM
    BindingDB: Ki=48nM
    19664 3vqs:A (1.9) BS01 JT1 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 22615294 MOAD: ic50=0.0178uM
    PDBbind: -logKd/Ki=7.75, IC50=0.0178uM
    19665 3vqs:B (1.9) BS01 JT1 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 22615294 MOAD: ic50=0.0178uM
    19666 3vqs:C (1.9) BS01 JT1 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 22615294 MOAD: ic50=0.0178uM
    19667 3vqs:D (1.9) BS01 JT1 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 22615294 MOAD: ic50=0.0178uM
    19668 3vqu:A (2.4) BS01 O22 2.7.12.1 GO:0004672 ... P33981 24900510 PDBbind: -logKd/Ki=7.43, IC50=37nM
    19669 3vrt:A (2.4) BS02 YS2 ? GO:0003677 ... P13053 22512505 MOAD: ic50=2.7nM
    PDBbind: -logKd/Ki=8.57, IC50=2.7nM
    19670 3vru:A (2.0) BS02 YS3 ? GO:0003677 ... P13053 22512505 MOAD: ic50=0.1nM
    PDBbind: -logKd/Ki=10.00, IC50=0.10nM
    19671 3vrv:A (1.9) BS02 YSD ? GO:0003677 ... P13053 22512505 MOAD: ic50=0.029nM
    PDBbind: -logKd/Ki=10.54, IC50=0.029nM
    19672 3vrw:A (2.4) BS02 YS5 ? GO:0003677 ... P13053 22512505 MOAD: ic50=0.41nM
    PDBbind: -logKd/Ki=9.39, IC50=0.41nM
    19673 3vry:A (2.481) BS01 B43 2.7.10.2 GO:0004672 ... P08631 23596204 MOAD: ic50=7.7nM
    PDBbind: -logKd/Ki=8.11, IC50=7.7nM
    19674 3vry:B (2.481) BS02 B43 2.7.10.2 GO:0004672 ... P08631 23596204 MOAD: ic50=7.7nM
    19675 3vs3:A (2.17) BS01 VSE 2.7.10.2 GO:0004672 ... P08631 23596204 PDBbind: -logKd/Ki=9.37, IC50=0.43nM
    BindingDB: IC50=0.426580nM
    19676 3vs3:B (2.17) BS01 VSE 2.7.10.2 GO:0004672 ... P08631 23596204 BindingDB: IC50=0.426580nM
    19677 3vs4:A (2.747) BS01 VSF 2.7.10.2 GO:0004672 ... P08631 23596204 BindingDB: IC50=31nM
    19678 3vs4:B (2.747) BS02 VSF 2.7.10.2 GO:0004672 ... P08631 23596204 BindingDB: IC50=31nM
    19679 3vso:A (2.0) BS01 EK1 ? GO:0003677 ... P37231 23490155 BindingDB: EC50=35nM
    19680 3vsp:A (2.4) BS01 EK8 ? GO:0003677 ... P37231 N/A BindingDB: Kd=2.9nM, EC50=53nM
    19681 3vsw:A (3.0) BS01 R31 3.4.23.15 GO:0004190 ... P00797 22726934 PDBbind: -logKd/Ki=6.89, IC50=130nM
    BindingDB: IC50=130nM
    19682 3vsw:B (3.0) BS01 R31 3.4.23.15 GO:0004190 ... P00797 22726934 BindingDB: IC50=130nM
    19683 3vsx:A (2.8) BS01 R32 3.4.23.15 GO:0004190 ... P00797 22726934 PDBbind: -logKd/Ki=8.85, IC50=1.4nM
    BindingDB: IC50=1.4nM
    19684 3vsx:B (2.8) BS01 R32 3.4.23.15 GO:0004190 ... P00797 22726934 BindingDB: IC50=1.4nM
    19685 3vt3:A (1.7) BS02 VDX ? GO:0003677 ... P13053 23944708 BindingDB: Ki=0.1nM, EC50=0.2nM
    19686 3vt7:A (1.65) BS02 VDX ? GO:0003677 ... P13053 23944708 BindingDB: Ki=0.1nM, EC50=0.2nM
    19687 3vtb:A (2.0) BS02 TKA ? GO:0003677 ... P13053 24773565 MOAD: ic50=0.5nM
    PDBbind: -logKd/Ki=9.30, IC50=0.5nM
    19688 3vtc:A (1.5) BS02 TK3 ? GO:0003677 ... P13053 24773565 MOAD: ic50=13nM
    PDBbind: -logKd/Ki=7.89, IC50=13nM
    19689 3vtd:A (2.7) BS02 TKD ? GO:0003677 ... P13053 24773565 PDBbind: -logKd/Ki=7.92, IC50=12nM
    19690 3vuc:A (2.6) BS01 HHE 3.4.23.15 GO:0004190 ... P00797 24900544 PDBbind: -logKd/Ki=9.05, IC50=0.9nM
    19691 3vv6:A (2.05) BS01 B00 3.4.23.46 GO:0004190 ... P56817 22998419 MOAD: ic50=157uM
    PDBbind: -logKd/Ki=3.80, IC50=157uM
    19692 3vv7:A (2.1) BS01 0B1 3.4.23.46 GO:0004190 ... P56817 22998419 MOAD: ic50=4.6uM
    PDBbind: -logKd/Ki=5.34, IC50=4.6uM
    19693 3vv8:A (2.5) BS01 B02 3.4.23.46 GO:0004190 ... P56817 22998419 MOAD: ic50=17.1uM
    PDBbind: -logKd/Ki=4.77, IC50=17.1uM
    19694 3vva:A (2.59) BS03 CHW 1.-.-.- GO:0005739 ... Q26710 23487766 PDBbind: -logKd/Ki=9.32, IC50=0.48nM
    19695 3vvh:A (2.0) BS03 4BM 2.7.12.2 GO:0004672 ... Q02750 N/A BindingDB: IC50=15nM, Kd=31nM
    19696 3vvh:B (2.0) BS03 4BM 2.7.12.2 GO:0004672 ... Q02750 N/A BindingDB: IC50=15nM, Kd=31nM
    19697 3vvh:C (2.0) BS03 4BM 2.7.12.2 GO:0004672 ... Q02750 N/A BindingDB: IC50=15nM, Kd=31nM
    19698 3vvy:A (1.63) BS01 ET ? GO:0000976 ... A0A0F6AY66 23800819 PDBbind: -logKd/Ki=4.84, Kd=14.6uM
    19699 3vvz:A (2.51) BS01 RHQ ? GO:0000976 ... A0A0F6AY66 23800819 PDBbind: -logKd/Ki=4.58, Kd=26.4uM
    19700 3vw0:B (2.6) BS01 DEQ ? GO:0000976 ... A0A0F6AY66 23800819 PDBbind: -logKd/Ki=4.67, Kd=21.2uM
    19701 3vw1:B (2.21) BS01 CVI ? GO:0000976 ... A0A0F6AY66 23800819 PDBbind: -logKd/Ki=4.67, Kd=21.2uM
    19702 3vw2:A (2.34) BS01 BER ? GO:0000976 ... A0A0F6AY66 23800819 PDBbind: -logKd/Ki=4.75, Kd=17.9uM
    19703 3vw2:B (2.34) BS01 BER ? GO:0000976 ... A0A0F6AY66 23800819 PDBbind: -logKd/Ki=4.75, Kd=17.9uM
    19704 3vw3:H (2.5) BS01 dna N/A N/A N/A 23519658 PDBbind: Kd=0.22uM
    19705 3vw3:L (2.5) BS01 dna N/A N/A N/A 23519658 PDBbind: Kd=0.22uM
    19706 3vw3:L (2.5) BS02 dna N/A N/A N/A 23519658 PDBbind: Kd=0.22uM
    19707 3vw6:A (2.4) BS01 IM6 2.7.11.25 GO:0004672 ... Q99683 23147077 PDBbind: -logKd/Ki=7.85, IC50=14nM
    BindingDB: IC50=14nM
    19708 3vw6:B (2.4) BS01 IM6 2.7.11.25 GO:0004672 ... Q99683 23147077 BindingDB: IC50=14nM
    19709 3vw7:A (2.2) BS01 VPX 3.2.1.17 GO:0003796 ... P00720
    P25116    		 23222541 PDBbind: -logKd/Ki=8.10, Ki=8nM
    19710 3vw8:A (2.1) BS01 DF6 2.7.10.1 GO:0004672 ... P08581 24216091 BindingDB: Ki=2nM, IC50=2nM
    19711 3vw9:A (1.47) BS02 HPJ 4.4.1.5 GO:0004462 ... Q04760 23122816 MOAD: ic50=0.011uM
    PDBbind: -logKd/Ki=7.96, IC50=0.011uM
    BindingDB: Ki=11nM, IC50=11nM
    19712 3vw9:A (1.47) BS04 HPJ 4.4.1.5 GO:0004462 ... Q04760 23122816 MOAD: ic50=0.011uM
    PDBbind: -logKd/Ki=7.96, IC50=0.011uM
    BindingDB: Ki=11nM, IC50=11nM
    19713 3vw9:B (1.47) BS02 HPJ 4.4.1.5 GO:0004462 ... Q04760 23122816 MOAD: ic50=0.011uM
    PDBbind: -logKd/Ki=7.96, IC50=0.011uM
    BindingDB: Ki=11nM, IC50=11nM
    19714 3vw9:B (1.47) BS04 HPJ 4.4.1.5 GO:0004462 ... Q04760 23122816 MOAD: ic50=0.011uM
    PDBbind: -logKd/Ki=7.96, IC50=0.011uM
    BindingDB: Ki=11nM, IC50=11nM
    19715 3vws:A (2.1) BS03 VWS 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13    		 GO:0003968 ... Q6YMS4 23408636 MOAD: Kd=225uM
    PDBbind: -logKd/Ki=3.65, Kd=225uM
    19716 3vws:A (2.1) BS04 VWS 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13    		 GO:0003968 ... Q6YMS4 23408636 MOAD: Kd=225uM
    PDBbind: -logKd/Ki=3.65, Kd=225uM
    19717 3vx3:A (2.1) BS01 ADP ? GO:0005524 ... Q5JIH4 23399544 PDBbind: -logKd/Ki=7.82, Kd=15nM
    19718 3vx3:A (2.1) BS02 ADP ? GO:0005524 ... Q5JIH4 23399544 PDBbind: -logKd/Ki=7.82, Kd=15nM
    19719 3vx3:B (2.1) BS01 ADP ? GO:0005524 ... Q5JIH4 23399544 PDBbind: -logKd/Ki=7.82, Kd=15nM
    19720 3vx3:B (2.1) BS02 ADP ? GO:0005524 ... Q5JIH4 23399544 PDBbind: -logKd/Ki=7.82, Kd=15nM
    19721 3vxv:A (2.0) BS01 dna 3.2.2.- GO:0003677 ... Q9Z2D7 23316048 PDBbind: Kd=98.8nM
    19722 3vxv:A (2.0) BS02 dna 3.2.2.- GO:0003677 ... Q9Z2D7 23316048 PDBbind: Kd=98.8nM
    19723 3vxx:A (2.204) BS01 dna 3.2.2.- GO:0003677 ... Q9Z2D7 23316048 PDBbind: Kd=97.5nM
    19724 3vxx:A (2.204) BS02 dna 3.2.2.- GO:0003677 ... Q9Z2D7 23316048 PDBbind: Kd=97.5nM
    19725 3vyb:A (2.4) BS01 dna 3.2.2.- GO:0003677 ... Q9Z2D7 23316048 PDBbind: Kd=162nM
    19726 3vyb:A (2.4) BS02 dna 3.2.2.- GO:0003677 ... Q9Z2D7 23316048 PDBbind: Kd=162nM
    19727 3vyd:A (2.81) BS01 VYD 3.4.23.15 GO:0004190 ... P00797 23122821 PDBbind: -logKd/Ki=6.39, IC50=406nM
    BindingDB: IC50=406nM
    19728 3vyd:B (2.81) BS01 VYD 3.4.23.15 GO:0004190 ... P00797 23122821 BindingDB: IC50=406nM
    19729 3vye:A (2.7) BS01 VYE 3.4.23.15 GO:0004190 ... P00797 23122821 PDBbind: -logKd/Ki=8.11, IC50=7.7nM
    BindingDB: IC50=7.7nM
    19730 3vye:B (2.7) BS01 VYE 3.4.23.15 GO:0004190 ... P00797 23122821 BindingDB: IC50=7.7nM
    19731 3vyf:A (2.8) BS01 VYF 3.4.23.15 GO:0004190 ... P00797 23122821 PDBbind: -logKd/Ki=8.80, IC50=1.6nM
    BindingDB: IC50=1.6nM
    19732 3vyf:B (2.8) BS01 VYF 3.4.23.15 GO:0004190 ... P00797 23122821 BindingDB: IC50=1.6nM
    19733 3vzc:A (2.3) BS01 UUL 2.3.1.-
    2.7.1.91    		 GO:0000287 ... Q9NYA1 23602659 BindingDB: Ki=16000nM, IC50=35000nM
    19734 3vzc:B (2.3) BS01 UUL 2.3.1.-
    2.7.1.91    		 GO:0000287 ... Q9NYA1 23602659 BindingDB: Ki=16000nM, IC50=35000nM
    19735 3vzc:C (2.3) BS01 UUL 2.3.1.-
    2.7.1.91    		 GO:0000287 ... Q9NYA1 23602659 BindingDB: Ki=16000nM, IC50=35000nM
    19736 3vzc:D (2.3) BS01 UUL 2.3.1.-
    2.7.1.91    		 GO:0000287 ... Q9NYA1 23602659 BindingDB: Ki=16000nM, IC50=35000nM
    19737 3vzc:E (2.3) BS01 UUL 2.3.1.-
    2.7.1.91    		 GO:0000287 ... Q9NYA1 23602659 BindingDB: Ki=16000nM, IC50=35000nM
    19738 3vzc:F (2.3) BS01 UUL 2.3.1.-
    2.7.1.91    		 GO:0000287 ... Q9NYA1 23602659 BindingDB: Ki=16000nM, IC50=35000nM
    19739 3vzd:A (2.3) BS01 UUL 2.3.1.-
    2.7.1.91    		 GO:0000287 ... Q9NYA1 23602659 PDBbind: -logKd/Ki=6.30, IC50~0.5uM
    BindingDB: Ki=16000nM, IC50=35000nM
    19740 3vzd:A (2.3) BS02 UUL 2.3.1.-
    2.7.1.91    		 GO:0000287 ... Q9NYA1 23602659 PDBbind: -logKd/Ki=6.30, IC50~0.5uM
    BindingDB: Ki=16000nM, IC50=35000nM
    19741 3vzd:B (2.3) BS01 UUL 2.3.1.-
    2.7.1.91    		 GO:0000287 ... Q9NYA1 23602659 BindingDB: Ki=16000nM, IC50=35000nM
    19742 3vzd:C (2.3) BS01 UUL 2.3.1.-
    2.7.1.91    		 GO:0000287 ... Q9NYA1 23602659 BindingDB: Ki=16000nM, IC50=35000nM
    19743 3vzd:D (2.3) BS01 UUL 2.3.1.-
    2.7.1.91    		 GO:0000287 ... Q9NYA1 23602659 BindingDB: Ki=16000nM, IC50=35000nM
    19744 3vzd:E (2.3) BS01 UUL 2.3.1.-
    2.7.1.91    		 GO:0000287 ... Q9NYA1 23602659 BindingDB: Ki=16000nM, IC50=35000nM
    19745 3vzd:F (2.3) BS01 UUL 2.3.1.-
    2.7.1.91    		 GO:0000287 ... Q9NYA1 23602659 BindingDB: Ki=16000nM, IC50=35000nM
    19746 3vzg:A (2.7) BS01 MAN ? GO:0005515 ... O60844 24790092 PDBbind: -logKd/Ki=1.72, Kd=19mM
    19747 3vzv:A (2.8) BS01 VZV 2.3.2.27 GO:0005634 ... Q00987 23266121 PDBbind: -logKd/Ki=8.04, IC50=9.2nM
    19748 3w07:A (1.03) BS01 U5P 4.1.1.23 GO:0004590 ... O26232 23395822 MOAD: Kd=0.00042M
    PDBbind: -logKd/Ki=3.38, Kd=0.42mM
    19749 3w0l:B (2.92) BS01 F6R ? GO:0004857 ... Q91754 23733961 PDBbind: -logKd/Ki=7.02, Kd=95nM
    19750 3w1f:A (2.7) BS01 1O5 2.7.12.1 GO:0004672 ... P33981 23634759 PDBbind: -logKd/Ki=8.44, IC50=3.67nM
    BindingDB: IC50=198nM
    19751 3w1k:A (7.5) BS01 rna 2.9.1.1 GO:0001514 ... O67140 23559248 PDBbind: Kd=75nM
    19752 3w1k:B (7.5) BS01 rna 2.9.1.1 GO:0001514 ... O67140 23559248 PDBbind: Kd=75nM
    19753 3w1k:C (7.5) BS01 rna 2.9.1.1 GO:0001514 ... O67140 23559248 PDBbind: Kd=75nM
    19754 3w1k:C (7.5) BS02 rna 2.9.1.1 GO:0001514 ... O67140 23559248 PDBbind: Kd=75nM
    19755 3w1k:C (7.5) BS03 rna 2.9.1.1 GO:0001514 ... O67140 23559248 PDBbind: Kd=75nM
    19756 3w1k:D (7.5) BS01 rna 2.9.1.1 GO:0001514 ... O67140 23559248 PDBbind: Kd=75nM
    19757 3w1k:E (7.5) BS01 rna 2.9.1.1 GO:0001514 ... O67140 23559248 PDBbind: Kd=75nM
    19758 3w2o:A (2.35) BS01 03P 2.7.10.1 GO:0004672 ... P00533 24900643 PDBbind: -logKd/Ki=5.08, IC50=8400nM
    BindingDB: IC50=4.0nM
    19759 3w2p:A (2.05) BS01 W2P 2.7.10.1 GO:0004672 ... P00533 24900643 PDBbind: -logKd/Ki=5.09, IC50=8100nM
    19760 3w2q:A (2.2) BS01 HKI 2.7.10.1 GO:0004672 ... P00533 24900643 PDBbind: -logKd/Ki=7.18, IC50=66nM
    19761 3w2r:A (2.05) BS01 W2R 2.7.10.1 GO:0004672 ... P00533 24900643 PDBbind: -logKd/Ki=7.72, IC50=19nM
    BindingDB: IC50=6.9nM
    19762 3w2s:A (1.9) BS01 W2R 2.7.10.1 GO:0004672 ... P00533 24900643 PDBbind: -logKd/Ki=8.16, IC50=6.9nM
    BindingDB: IC50=6.9nM
    19763 3w2t:A (2.36) BS01 LF7 3.4.14.5 GO:0001618 ... P27487 23501107 PDBbind: -logKd/Ki=7.53, IC50=29.2nM
    BindingDB: IC50=3.5nM
    19764 3w2t:B (2.36) BS01 LF7 3.4.14.5 GO:0001618 ... P27487 23501107 BindingDB: IC50=3.5nM
    19765 3w32:A (1.8) BS01 W32 2.7.10.1 GO:0004672 ... P00533 23490150 MOAD: ic50=75nM
    PDBbind: -logKd/Ki=7.12, IC50=75nM
    BindingDB: IC50=75nM
    19766 3w33:A (1.7) BS01 W19 2.7.10.1 GO:0004672 ... P00533 23490150 MOAD: ic50=36nM
    PDBbind: -logKd/Ki=7.44, IC50=36nM
    BindingDB: IC50=36nM
    19767 3w3c:A (2.431) BS01 dna ? GO:0003677 ... P0A247 23985969 PDBbind: Kd=16nM
    19768 3w3c:A (2.431) BS02 dna ? GO:0003677 ... P0A247 23985969 PDBbind: Kd=16nM
    19769 3w3k:A (2.3) BS01 L07 ? GO:0002224 ... Q9NR97 23520111 BindingDB: EC50=1320nM
    19770 3w3k:A (2.3) BS02 L07 ? GO:0002224 ... Q9NR97 23520111 BindingDB: EC50=1320nM
    19771 3w3k:B (2.3) BS01 L07 ? GO:0002224 ... Q9NR97 23520111 BindingDB: EC50=1320nM
    19772 3w3k:B (2.3) BS02 L07 ? GO:0002224 ... Q9NR97 23520111 BindingDB: EC50=1320nM
    19773 3w3l:A (2.33) BS02 RX8 ? GO:0002224 ... Q9NR97 23520111 BindingDB: EC50=4500nM
    19774 3w3l:A (2.33) BS03 RX8 ? GO:0002224 ... Q9NR97 23520111 BindingDB: EC50=4500nM
    19775 3w3l:B (2.33) BS02 RX8 ? GO:0002224 ... Q9NR97 23520111 BindingDB: EC50=4500nM
    19776 3w3l:B (2.33) BS03 RX8 ? GO:0002224 ... Q9NR97 23520111 BindingDB: EC50=4500nM
    19777 3w3l:C (2.33) BS01 RX8 ? GO:0002224 ... Q9NR97 23520111 BindingDB: EC50=4500nM
    19778 3w3l:C (2.33) BS02 RX8 ? GO:0002224 ... Q9NR97 23520111 BindingDB: EC50=4500nM
    19779 3w3l:D (2.33) BS02 RX8 ? GO:0002224 ... Q9NR97 23520111 BindingDB: EC50=4500nM
    19780 3w3l:D (2.33) BS03 RX8 ? GO:0002224 ... Q9NR97 23520111 BindingDB: EC50=4500nM
    19781 3w3m:A (2.7) BS01 RX8 ? GO:0002224 ... Q9NR97 23520111 BindingDB: EC50=4500nM
    19782 3w3n:A (2.1) BS02 RX8 ? GO:0002224 ... Q9NR97 23520111 BindingDB: EC50=4500nM
    19783 3w3n:A (2.1) BS03 RX8 ? GO:0002224 ... Q9NR97 23520111 BindingDB: EC50=4500nM
    19784 3w3n:B (2.1) BS02 RX8 ? GO:0002224 ... Q9NR97 23520111 BindingDB: EC50=4500nM
    19785 3w3n:B (2.1) BS03 RX8 ? GO:0002224 ... Q9NR97 23520111 BindingDB: EC50=4500nM
    19786 3w4i:A (2.5) BS02 8LG 1.4.3.3 GO:0003884 ... P14920 23566269 MOAD: ic50=1150nM
    19787 3w4i:B (2.5) BS02 8LG 1.4.3.3 GO:0003884 ... P14920 23566269 MOAD: ic50=1150nM
    19788 3w4i:C (2.5) BS02 8LG 1.4.3.3 GO:0003884 ... P14920 23566269 MOAD: ic50=1150nM
    19789 3w4i:D (2.5) BS02 8LG 1.4.3.3 GO:0003884 ... P14920 23566269 MOAD: ic50=1150nM
    19790 3w4j:A (2.74) BS02 2LD 1.4.3.3 GO:0003884 ... P14920 23566269 BindingDB: IC50=20nM
    19791 3w4j:B (2.74) BS02 2LD 1.4.3.3 GO:0003884 ... P14920 23566269 BindingDB: IC50=20nM
    19792 3w4j:C (2.74) BS02 2LD 1.4.3.3 GO:0003884 ... P14920 23566269 BindingDB: IC50=20nM
    19793 3w4j:D (2.74) BS02 2LD 1.4.3.3 GO:0003884 ... P14920 23566269 BindingDB: IC50=20nM
    19794 3w4k:A (2.86) BS02 3LD 1.4.3.3 GO:0003884 ... P14920 23566269 BindingDB: IC50=3.80nM
    19795 3w4k:B (2.86) BS02 3LD 1.4.3.3 GO:0003884 ... P14920 23566269 BindingDB: IC50=3.80nM
    19796 3w4k:C (2.86) BS02 3LD 1.4.3.3 GO:0003884 ... P14920 23566269 BindingDB: IC50=3.80nM
    19797 3w4k:D (2.86) BS02 3LD 1.4.3.3 GO:0003884 ... P14920 23566269 BindingDB: IC50=3.80nM
    19798 3w51:A (2.0) BS01 AJ2 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 23672613 MOAD: ic50=12uM
    19799 3w51:B (2.0) BS01 AJ2 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 23672613 MOAD: ic50=12uM
    19800 3w54:A (2.3) BS03 RNB 1.-.-.- GO:0005739 ... Q26710 23487766 MOAD: ic50=0.2nM
    PDBbind: -logKd/Ki=9.70, IC50=0.2nM
    BindingDB: IC50=4.0nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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