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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    17801 3qts:A (1.9) BS01 X46 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=5.51, IC50=3.1uM
    17802 3qtu:A (1.82) BS01 X44 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=7.15, IC50=0.07uM
    17803 3qtv:H (1.63) BS03 06P 3.4.21.5 GO:0004252 ... P00734 22366545 MOAD: Ki=22.5uM
    PDBbind: -logKd/Ki=4.65, Ki=22.5uM
    17804 3qtw:A (1.85) BS01 X3A 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=6.19, IC50=0.65uM
    17805 3qtx:A (1.95) BS01 X43 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=7.15, IC50=0.07uM
    17806 3qtz:A (2.0) BS01 X42 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=7.30, IC50=0.05uM
    17807 3qu0:A (1.95) BS01 X40 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    BindingDB: IC50=0.900000nM
    17808 3qud:A (2.0) BS01 N3F 2.7.11.24 GO:0000077 ... Q16539 N/A BindingDB: IC50=145nM
    17809 3que:A (2.7) BS01 3FF 2.7.11.24 GO:0000077 ... Q16539 22198732 PDBbind: -logKd/Ki=8.82, Kd=1.5nM
    BindingDB: IC50=40nM
    17810 3qug:A (1.7) BS01 GIX ? N/A Q931P4 21797259 MOAD: Kd=2.6uM
    17811 3qug:B (1.7) BS01 GIX ? N/A Q931P4 21797259 MOAD: Kd=2.6uM
    17812 3qup:A (1.9) BS01 LUN 2.7.10.1 GO:0004672 ... P55144 22119469 MOAD: ic50=0.476uM
    PDBbind: -logKd/Ki=6.32, IC50=0.476uM
    17813 3quy:A (2.25) BS02 QUY ? N/A P11609 21552205 MOAD: Kd=187nM
    17814 3quz:A (2.3) BS02 QUV ? N/A P11609 21552205 MOAD: Kd=39.6nM
    17815 3qvu:A (2.5) BS01 NPO 2.8.2.1 GO:0004062 ... P50225 21723874 MOAD: Ki=283uM
    PDBbind: -logKd/Ki=3.55, Ki=283uM
    17816 3qvu:B (2.5) BS02 NPO 2.8.2.1 GO:0004062 ... P50225 21723874 MOAD: Ki=283uM
    17817 3qvv:A (2.35) BS02 3QV 2.8.2.1 GO:0004062 ... P50225 21723874 MOAD: Ki=38uM
    PDBbind: -logKd/Ki=4.42, Ki=38uM
    17818 3qvv:B (2.35) BS02 3QV 2.8.2.1 GO:0004062 ... P50225 21723874 MOAD: Ki=38uM
    17819 3qwc:H (1.75) BS03 98P 3.4.21.5 GO:0004252 ... P00734 22366545 MOAD: Ki=55.4uM
    PDBbind: -logKd/Ki=4.26, Ki=55.4uM
    17820 3qwi:A (2.5) BS02 CUE 1.1.1.62 GO:0000166 ... O93874 21929506 MOAD: ic50=2.8uM
    17821 3qwi:B (2.5) BS02 CUE 1.1.1.62 GO:0000166 ... O93874 21929506 MOAD: ic50=2.8uM
    17822 3qwi:D (2.5) BS02 CUE 1.1.1.62 GO:0000166 ... O93874 21929506 MOAD: ic50=2.8uM
    17823 3qx3:A (2.162) BS04 EVP 5.6.2.2 GO:0003677 ... Q02880 21778401 BindingDB: IC50=70nM, EC50=>70000nM
    17824 3qx3:B (2.162) BS05 EVP 5.6.2.2 GO:0003677 ... Q02880 21778401 BindingDB: IC50=70nM, EC50=>70000nM
    17825 3qx5:H (1.35) BS03 02P 3.4.21.5 GO:0004252 ... P00734 22366545 MOAD: Ki=63.5uM
    PDBbind: -logKd/Ki=4.20, Ki=63.5uM
    17826 3qx8:A (2.3) BS01 GTG 3.1.26.n2 GO:0003676 ... Q9UKV8 21475248 MOAD: Kd=1.37mM
    PDBbind: -logKd/Ki=2.86, Kd=1.37mM
    17827 3qx8:B (2.3) BS01 GTG 3.1.26.n2 GO:0003676 ... Q9UKV8 21475248 MOAD: Kd=1.37mM
    17828 3qx8:C (2.3) BS01 GTG 3.1.26.n2 GO:0003676 ... Q9UKV8 21475248 MOAD: Kd=1.37mM
    17829 3qx9:A (2.0) BS01 ATP 3.1.26.n2 GO:0003676 ... Q9UKV8 21475248 MOAD: Kd=0.09mM
    PDBbind: -logKd/Ki=4.05, Kd=0.09mM
    17830 3qx9:B (2.0) BS01 ATP 3.1.26.n2 GO:0003676 ... Q9UKV8 21475248 MOAD: Kd=0.09mM
    17831 3qx9:C (2.0) BS01 ATP 3.1.26.n2 GO:0003676 ... Q9UKV8 21475248 MOAD: Kd=0.09mM
    17832 3qxc:A (1.34) BS01 ATP 6.3.3.3 GO:0000287 ... O24872 22284390 MOAD: Kd=1.7uM
    PDBbind: -logKd/Ki=5.77, Kd=1.7uM
    17833 3qxh:A (1.36) BS02 ADP 6.3.3.3 GO:0000287 ... O24872 22284390 MOAD: Kd=5.8uM
    PDBbind: -logKd/Ki=5.24, Kd=5.8uM
    17834 3qxm:A (1.65) BS01 NDZ ? GO:0015276 ... Q13002 21893069 MOAD: Ki=33nM
    PDBbind: -logKd/Ki=7.48, Ki=33nM
    17835 3qxm:B (1.65) BS01 NDZ ? GO:0015276 ... Q13002 21893069 MOAD: Ki=33nM
    17836 3qxp:A (1.75) BS01 X64 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    BindingDB: IC50=1.1nM
    17837 3qxt:A (1.7) BS01 MTX N/A N/A N/A 21557375 MOAD: Kd=6700nM
    PDBbind: -logKd/Ki=5.22, Kd=6uM
    17838 3qxt:B (1.7) BS01 MTX N/A N/A N/A 21557375 MOAD: Kd=6700nM
    17839 3qxv:A (2.5) BS01 MTX N/A N/A N/A 21557375 MOAD: Kd=5nM
    PDBbind: -logKd/Ki=8.40, Kd=4nM
    17840 3qxv:B (2.5) BS01 MTX N/A N/A N/A 21557375 MOAD: Kd=5nM
    17841 3qxv:C (2.5) BS01 MTX N/A N/A N/A 21557375 MOAD: Kd=5nM
    17842 3qxv:D (2.5) BS01 MTX N/A N/A N/A 21557375 MOAD: Kd=5nM
    17843 3qxv:E (2.5) BS01 MTX N/A N/A N/A 21557375 MOAD: Kd=5nM
    17844 3qyk:A (1.469) BS02 IE2 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A BindingDB: Ki=49nM
    17845 3qyl:A (1.79) BS01 7ME 1.5.1.3 GO:0004146 ... P0ABQ4 22246400 MOAD: Ki=1uM
    17846 3qym:A (3.2) BS01 dna ? GO:0000976 ... Q9H3D4 21464285 PDBbind: Kd=11.7uM
    17847 3qym:B (3.2) BS01 dna ? GO:0000976 ... Q9H3D4 21464285 PDBbind: Kd=11.7uM
    17848 3qym:C (3.2) BS01 dna ? GO:0000976 ... Q9H3D4 21464285 PDBbind: Kd=11.7uM
    17849 3qym:D (3.2) BS01 dna ? GO:0000976 ... Q9H3D4 21464285 PDBbind: Kd=11.7uM
    17850 3qym:E (3.2) BS01 dna ? GO:0000976 ... Q9H3D4 21464285 PDBbind: Kd=11.7uM
    17851 3qym:F (3.2) BS01 dna ? GO:0000976 ... Q9H3D4 21464285 PDBbind: Kd=11.7uM
    17852 3qym:G (3.2) BS01 dna ? GO:0000976 ... Q9H3D4 21464285 PDBbind: Kd=11.7uM
    17853 3qym:H (3.2) BS01 dna ? GO:0000976 ... Q9H3D4 21464285 PDBbind: Kd=11.7uM
    17854 3qyo:A (2.09) BS01 Q24 1.5.1.3 GO:0004146 ... P0ABQ4 22246400 MOAD: Ki=7uM
    17855 3qyy:A (1.9) BS01 C2E 2.7.7.65 N/A Q8P559 22120736 Manual survey: Ki=6.54uM (22120736)
    MOAD: Kd=8.26uM
    PDBbind: -logKd/Ki=5.08, Kd=8.26uM
    17856 3qyy:A (1.9) BS02 MG 2.7.7.65 N/A Q8P559 22120736 Manual survey: Ki=6.54uM (22120736)
    17857 3qyy:A (1.9) BS03 C2E 2.7.7.65 N/A Q8P559 22120736 Manual survey: Ki=6.54uM (22120736)
    MOAD: Kd=8.26uM
    PDBbind: -logKd/Ki=5.08, Kd=8.26uM
    17858 3qyy:B (1.9) BS01 C2E 2.7.7.65 N/A Q8P559 22120736 Manual survey: Ki=6.54uM (22120736)
    MOAD: Kd=8.26uM
    PDBbind: -logKd/Ki=5.08, Kd=8.26uM
    17859 3qyy:B (1.9) BS02 C2E 2.7.7.65 N/A Q8P559 22120736 Manual survey: Ki=6.54uM (22120736)
    MOAD: Kd=8.26uM
    PDBbind: -logKd/Ki=5.08, Kd=8.26uM
    17860 3qyy:B (1.9) BS03 MG 2.7.7.65 N/A Q8P559 22120736 Manual survey: Ki=6.54uM (22120736)
    17861 3qzq:A (1.7001) BS01 AG7 ? GO:0004197 ... E7E815 21813612 PDBbind: -logKd/Ki=5.64, IC50=2.3uM
    17862 3r00:A (2.1) BS01 UNJ 2.7.11.1 GO:0004672 ... P11309 21507633 MOAD: ic50=8.5uM
    PDBbind: -logKd/Ki=5.07, IC50=8.5uM
    BindingDB: IC50=9000nM
    17863 3r01:A (2.6) BS01 UNE 2.7.11.1 GO:0004672 ... P11309 21507633 PDBbind: -logKd/Ki=5.24, IC50=5.8uM
    BindingDB: IC50=6000nM
    17864 3r02:A (1.95) BS01 UNM 2.7.11.1 GO:0004672 ... P11309 21507633 MOAD: ic50=0.001uM
    PDBbind: -logKd/Ki=9.00, IC50=1nM
    BindingDB: IC50=1nM
    17865 3r04:A (1.7) BS01 UNQ 2.7.11.1 GO:0004672 ... P11309 21507633 MOAD: ic50=0.12uM
    PDBbind: -logKd/Ki=6.92, IC50=0.12uM
    BindingDB: IC50=120nM
    17866 3r0i:A (2.1) BS02 C0K 1.1.1.267 GO:0008299 ... P45568 21866890 MOAD: ic50=0.12uM
    PDBbind: -logKd/Ki=6.92, IC50=0.12uM
    17867 3r0i:B (2.1) BS02 C0K 1.1.1.267 GO:0008299 ... P45568 21866890 MOAD: ic50=0.12uM
    17868 3r0t:A (1.75) BS01 FU9 2.7.11.1 GO:0004672 ... P68400 21870818 MOAD: ic50=0.91nM
    PDBbind: -logKd/Ki=9.04, IC50=0.91nM
    BindingDB: IC50=>750nM
    17869 3r0w:A (1.7) BS01 RSY 3.1.26.13 GO:0004190 ... Q000H7 22469467 MOAD: ic50=30.3uM
    PDBbind: -logKd/Ki=4.52, IC50=30.0uM
    17870 3r0w:B (1.7) BS01 RSY 3.1.26.13 GO:0004190 ... Q000H7 22469467 PDBbind: -logKd/Ki=4.52, IC50=30.0uM
    17871 3r0y:A (1.65) BS01 RSZ 3.1.26.13 GO:0004190 ... Q000H7 22469467 MOAD: ic50=14.53uM
    PDBbind: -logKd/Ki=4.84, Kd=14.53uM
    17872 3r0y:B (1.65) BS01 RSZ 3.1.26.13 GO:0004190 ... Q000H7 22469467 PDBbind: -logKd/Ki=4.84, Kd=14.53uM
    17873 3r16:A (1.6) BS02 5UN 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21620713 MOAD: Ki=50nM
    PDBbind: -logKd/Ki=7.30, Ki=50nM
    BindingDB: Ki=50nM
    17874 3r17:B (1.7) BS02 5UM 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 21620713 MOAD: Ki=390nM
    PDBbind: -logKd/Ki=6.41, Ki=390nM
    BindingDB: Ki=390nM
    17875 3r1v:A (2.19) BS01 AZB ? GO:0005549 ... Q7PXT9 22019737 MOAD: Kd=0.12uM
    PDBbind: -logKd/Ki=6.92, Kd=0.12uM
    17876 3r1v:B (2.19) BS01 AZB ? GO:0005549 ... Q7PXT9 22019737 MOAD: Kd=0.12uM
    17877 3r21:A (2.9) BS01 D36 2.7.11.1 GO:0000212 ... O14965 21798738 PDBbind: -logKd/Ki=6.74, IC50=0.18uM
    BindingDB: IC50=180nM
    17878 3r22:A (2.9) BS01 D37 2.7.11.1 GO:0000212 ... O14965 21798738 PDBbind: -logKd/Ki=7.77, IC50=17nM
    BindingDB: IC50=17nM
    17879 3r24:A (2.0) BS01 SAM 2.1.1.-
    2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0004483 ... P0C6X7 22022266 PDBbind: -logKd/Ki=5.25, Kd=5.59uM
    17880 3r2a:A (3.0) BS01 RHN ? GO:0003677 ... P19793 21613212 PDBbind: -logKd/Ki=6.12, IC50=0.75uM
    17881 3r2a:C (3.0) BS01 RHN ? GO:0003677 ... P19793 21613212 PDBbind: -logKd/Ki=6.12, IC50=0.75uM
    17882 3r2b:A (2.9) BS01 05B 2.7.11.1 GO:0004672 ... P49137 21565500 PDBbind: -logKd/Ki=8.40, IC50=4nM
    BindingDB: EC50=620nM
    17883 3r2b:B (2.9) BS01 05B 2.7.11.1 GO:0004672 ... P49137 21565500 BindingDB: EC50=620nM
    17884 3r2f:A (2.53) BS01 PB0 3.4.23.46 GO:0004190 ... P56817 21782431 PDBbind: -logKd/Ki=8.85, IC50=1.4nM
    BindingDB: IC50=1.4nM
    17885 3r2f:B (2.53) BS01 PB0 3.4.23.46 GO:0004190 ... P56817 21782431 BindingDB: IC50=1.4nM
    17886 3r2f:D (2.53) BS01 PB0 3.4.23.46 GO:0004190 ... P56817 21782431 BindingDB: IC50=1.4nM
    17887 3r2f:E (2.53) BS01 PB0 3.4.23.46 GO:0004190 ... P56817 21782431 BindingDB: IC50=1.4nM
    17888 3r2y:A (3.0) BS01 P4O 2.7.11.1 GO:0004672 ... P49137 21565500 PDBbind: -logKd/Ki=8.07, IC50=8.5nM
    BindingDB: IC50=8.5nM, EC50=49nM
    17889 3r30:A (3.2) BS01 CD2 2.7.11.1 GO:0004672 ... P49137 21565500 BindingDB: EC50=28nM
    17890 3r32:A (1.8) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=6nM
    17891 3r32:A (1.8) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=6nM
    17892 3r33:A (2.09) BS01 6ME 1.5.1.3 GO:0004146 ... P0ABQ4 22246400 MOAD: Ki=0.8uM
    BindingDB: Ki=1100nM
    17893 3r34:A (1.8) BS01 COA 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Ki=32uM
    17894 3r34:A (1.8) BS02 COA 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Ki=32uM
    17895 3r34:B (1.8) BS01 COA 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Ki=32uM
    17896 3r34:B (1.8) BS02 COA 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Ki=32uM
    17897 3r35:A (1.8) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=2.2nM
    17898 3r35:A (1.8) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=2.2nM
    17899 3r35:B (1.8) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=2.2nM
    17900 3r35:B (1.8) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=2.2nM
    17901 3r37:A (1.8) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=27nM
    17902 3r37:A (1.8) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=27nM
    17903 3r37:B (1.8) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=27nM
    17904 3r37:B (1.8) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=27nM
    17905 3r3b:A (1.8) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=37nM
    17906 3r3b:A (1.8) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=37nM
    17907 3r3b:B (1.8) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=37nM
    17908 3r3b:B (1.8) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=37nM
    17909 3r3c:A (1.8) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=220nM
    17910 3r3c:A (1.8) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=220nM
    17911 3r3c:B (1.8) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=220nM
    17912 3r3c:B (1.8) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=220nM
    17913 3r3d:A (1.75) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=13nM
    17914 3r3d:A (1.75) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=13nM
    17915 3r3d:B (1.75) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=13nM
    17916 3r3d:B (1.75) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=13nM
    17917 3r3f:A (1.75) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=37nM
    17918 3r3f:A (1.75) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=37nM
    17919 3r3f:B (1.75) BS01 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=37nM
    17920 3r3f:B (1.75) BS02 4CO 3.1.2.23 GO:0005829 ... Q04416 22873756 MOAD: Kd=37nM
    17921 3r43:A (2.0) BS02 ID8 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64    		 GO:0001523 ... P42330 22937138 BindingDB: Ki=300nM, IC50=560nM
    17922 3r4m:A (1.7) BS01 WOE 3.6.4.10 GO:0005524 ... P07900 21438541 MOAD: Ki=1.2uM
    PDBbind: -logKd/Ki=5.92, Ki=1.2uM
    BindingDB: Ki=1200nM
    17923 3r4n:A (2.0) BS01 FU5 3.6.4.10 GO:0005524 ... P07900 21438541 MOAD: Ki=0.13uM
    PDBbind: -logKd/Ki=6.89, Ki=0.13uM
    BindingDB: Ki=130nM
    17924 3r4n:B (2.0) BS01 FU5 3.6.4.10 GO:0005524 ... P07900 21438541 MOAD: Ki=0.13uM
    BindingDB: Ki=130nM
    17925 3r4o:A (2.65) BS01 FU3 3.6.4.10 GO:0005524 ... P07900 21438541 PDBbind: -logKd/Ki=8.15, Ki=7nM
    BindingDB: Ki=7nM
    17926 3r4o:B (2.65) BS01 FU3 3.6.4.10 GO:0005524 ... P07900 21438541 BindingDB: Ki=7nM
    17927 3r4p:A (1.7) BS01 FU7 3.6.4.10 GO:0005524 ... P07900 21438541 MOAD: Ki=0.011uM
    PDBbind: -logKd/Ki=7.96, Ki=11nM
    BindingDB: Ki=11nM
    17928 3r4p:B (1.7) BS01 FU7 3.6.4.10 GO:0005524 ... P07900 21438541 MOAD: Ki=0.011uM
    BindingDB: Ki=11nM
    17929 3r51:A (2.1) BS01 MMA ? GO:0002213 ... P93193 22808208 MOAD: Kd=142uM
    17930 3r52:A (2.1) BS01 GYP ? GO:0002213 ... P93193 22808208 MOAD: Kd=498uM
    17931 3r52:B (2.1) BS01 GYP ? GO:0002213 ... P93193 22808208 MOAD: Kd=498uM
    17932 3r52:C (2.1) BS01 GYP ? GO:0002213 ... P93193 22808208 MOAD: Kd=498uM
    17933 3r52:D (2.1) BS01 GYP ? GO:0002213 ... P93193 22808208 MOAD: Kd=498uM
    17934 3r58:A (2.3) BS02 NPS 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64    		 GO:0001523 ... P42330 22937138 BindingDB: IC50=180nM
    17935 3r5m:A (2.8) BS02 MLO ? GO:0003677 ... P19793 22140563 PDBbind: -logKd/Ki=4.34, Kd=45.7uM
    17936 3r5n:A (2.0) BS01 MLO ? GO:0003677 ... P37231 22140563 MOAD: Kd=1.67uM
    PDBbind: -logKd/Ki=5.78, Kd=1.67uM
    17937 3r5n:A (2.0) BS02 MLO ? GO:0003677 ... P37231 22140563 MOAD: Kd=1.67uM
    PDBbind: -logKd/Ki=5.78, Kd=1.67uM
    17938 3r5r:A (2.101) BS01 F42 1.-.-.-
    1.1.98.-    		 GO:0016491 ... P9WP15 22244759 MOAD: Kd=1uM
    17939 3r5r:B (2.101) BS01 F42 1.-.-.-
    1.1.98.-    		 GO:0016491 ... P9WP15 22244759 MOAD: Kd=1uM
    17940 3r5r:C (2.101) BS01 F42 1.-.-.-
    1.1.98.-    		 GO:0016491 ... P9WP15 22244759 MOAD: Kd=1uM
    17941 3r5r:D (2.101) BS01 F42 1.-.-.-
    1.1.98.-    		 GO:0016491 ... P9WP15 22244759 MOAD: Kd=1uM
    17942 3r5r:E (2.101) BS01 F42 1.-.-.-
    1.1.98.-    		 GO:0016491 ... P9WP15 22244759 MOAD: Kd=1uM
    17943 3r5t:A (1.45) BS01 VBN ? GO:0030288 ... Q9RCF6 22291019 PDBbind: -logKd/Ki=8.58, Kd=2.65nM
    17944 3r5w:A (1.786) BS01 F42 1.-.-.-
    1.1.98.-    		 GO:0016491 ... P9WP15 22244759 MOAD: Kd=1uM
    17945 3r5w:A (1.786) BS02 F42 1.-.-.-
    1.1.98.-    		 GO:0016491 ... P9WP15 22244759 MOAD: Kd=1uM
    17946 3r5w:B (1.786) BS01 F42 1.-.-.-
    1.1.98.-    		 GO:0016491 ... P9WP15 22244759 MOAD: Kd=1uM
    17947 3r5w:B (1.786) BS02 F42 1.-.-.-
    1.1.98.-    		 GO:0016491 ... P9WP15 22244759 MOAD: Kd=1uM
    17948 3r5w:C (1.786) BS01 F42 1.-.-.-
    1.1.98.-    		 GO:0016491 ... P9WP15 22244759 MOAD: Kd=1uM
    17949 3r5w:C (1.786) BS02 F42 1.-.-.-
    1.1.98.-    		 GO:0016491 ... P9WP15 22244759 MOAD: Kd=1uM
    17950 3r5w:D (1.786) BS01 F42 1.-.-.-
    1.1.98.-    		 GO:0016491 ... P9WP15 22244759 MOAD: Kd=1uM
    17951 3r5w:D (1.786) BS02 F42 1.-.-.-
    1.1.98.-    		 GO:0016491 ... P9WP15 22244759 MOAD: Kd=1uM
    17952 3r5w:E (1.786) BS01 F42 1.-.-.-
    1.1.98.-    		 GO:0016491 ... P9WP15 22244759 MOAD: Kd=1uM
    17953 3r5w:E (1.786) BS02 F42 1.-.-.-
    1.1.98.-    		 GO:0016491 ... P9WP15 22244759 MOAD: Kd=1uM
    17954 3r5w:K (1.786) BS01 F42 1.-.-.-
    1.1.98.-    		 GO:0016491 ... P9WP15 22244759 MOAD: Kd=1uM
    17955 3r5w:K (1.786) BS02 F42 1.-.-.-
    1.1.98.-    		 GO:0016491 ... P9WP15 22244759 MOAD: Kd=1uM
    17956 3r5w:L (1.786) BS01 F42 1.-.-.-
    1.1.98.-    		 GO:0016491 ... P9WP15 22244759 MOAD: Kd=1uM
    17957 3r5w:L (1.786) BS02 F42 1.-.-.-
    1.1.98.-    		 GO:0016491 ... P9WP15 22244759 MOAD: Kd=1uM
    17958 3r5w:M (1.786) BS01 F42 1.-.-.-
    1.1.98.-    		 GO:0016491 ... P9WP15 22244759 MOAD: Kd=1uM
    17959 3r5w:M (1.786) BS02 F42 1.-.-.-
    1.1.98.-    		 GO:0016491 ... P9WP15 22244759 MOAD: Kd=1uM
    17960 3r5w:N (1.786) BS01 F42 1.-.-.-
    1.1.98.-    		 GO:0016491 ... P9WP15 22244759 MOAD: Kd=1uM
    17961 3r5w:N (1.786) BS02 F42 1.-.-.-
    1.1.98.-    		 GO:0016491 ... P9WP15 22244759 MOAD: Kd=1uM
    17962 3r5w:O (1.786) BS01 F42 1.-.-.-
    1.1.98.-    		 GO:0016491 ... P9WP15 22244759 MOAD: Kd=1uM
    17963 3r5w:O (1.786) BS02 F42 1.-.-.-
    1.1.98.-    		 GO:0016491 ... P9WP15 22244759 MOAD: Kd=1uM
    17964 3r6c:A (1.83) BS04 17N 2.4.2.18 GO:0000162 ... P9WFX5 23363292 PDBbind: -logKd/Ki=4.72, Ki=19uM
    17965 3r6c:A (1.83) BS05 17N 2.4.2.18 GO:0000162 ... P9WFX5 23363292 PDBbind: -logKd/Ki=4.72, Ki=19uM
    17966 3r6i:A (1.95) BS02 JMS 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64    		 GO:0001523 ... P42330 22937138 BindingDB: IC50=540nM
    17967 3r6t:A (1.2) BS02 LU1 2.1.1.6 GO:0000287 ... P22734 22349227 MOAD: ic50=1368nM
    PDBbind: -logKd/Ki=5.86, IC50=1.368uM
    17968 3r6u:A (1.61) BS01 CHT ? GO:0005886 ... Q45462 21658392 MOAD: Kd=30.5uM
    PDBbind: -logKd/Ki=4.52, Kd=30.5uM
    17969 3r7o:A (2.3) BS01 M61 2.7.10.1 GO:0004672 ... P08581 21247903 PDBbind: -logKd/Ki=8.36, Kd=4.4nM
    BindingDB: IC50=3.0nM
    17970 3r7q:A (2.5) BS01 FAV 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 21636270 MOAD: ic50=0.108uM
    PDBbind: -logKd/Ki=6.97, IC50=0.108uM
    17971 3r7r:A (2.9) BS01 FAZ 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 21636270 PDBbind: -logKd/Ki=8.74, IC50=1.8nM
    17972 3r7x:A (2.1) BS01 QSN ? GO:0015276 ... P42262 21531559 MOAD: ic50=0.082uM
    17973 3r88:B (1.73) BS04 14F 2.4.2.18 GO:0000162 ... P9WFX5 23363292 PDBbind: -logKd/Ki=4.82, Ki=15uM
    17974 3r8a:A (2.41) BS01 HIG ? GO:0003677 ... P37231 21557540 BindingDB: EC50=591nM
    17975 3r8a:B (2.41) BS01 HIG ? GO:0003677 ... P37231 21557540 BindingDB: EC50=591nM
    17976 3r8f:A (3.366) BS01 dna ? GO:0003677 ... O66659 21964332 PDBbind: Kd=0.11uM
    17977 3r8f:B (3.366) BS01 dna ? GO:0003677 ... O66659 21964332 PDBbind: Kd=0.11uM
    17978 3r8f:C (3.366) BS01 dna ? GO:0003677 ... O66659 21964332 PDBbind: Kd=0.11uM
    17979 3r8f:D (3.366) BS01 dna ? GO:0003677 ... O66659 21964332 PDBbind: Kd=0.11uM
    17980 3r8i:A (2.3) BS01 XCX ? GO:0003677 ... P37231 22081932 MOAD: Kd=4.5uM
    PDBbind: -logKd/Ki=5.35, Kd=4.5uM
    BindingDB: EC50=110nM, Kd=4500nM
    17981 3r8u:A (2.0) BS01 Z31 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=5.30, IC50=5uM
    17982 3r8v:A (1.9) BS01 Z62 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=5.54, IC50=2.9uM
    17983 3r8z:A (1.85) BS01 Z63 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=4.31, IC50=49uM
    17984 3r91:A (1.579) BS01 06H 3.6.4.10 GO:0005524 ... P07900 21515049 MOAD: ic50=0.092uM
    PDBbind: -logKd/Ki=7.04, IC50=92nM
    17985 3r92:A (1.5801) BS01 06J 3.6.4.10 GO:0005524 ... P07900 21605975 MOAD: ic50=0.883uM
    PDBbind: -logKd/Ki=7.02, IC50=96nM
    BindingDB: IC50=96nM
    17986 3r96:A (1.3) BS02 AMP ? GO:0016747 ... Q47510 21507941 MOAD: Kd=1.03mM
    17987 3r96:B (1.3) BS02 AMP ? GO:0016747 ... Q47510 21507941 MOAD: Kd=1.03mM
    17988 3r9c:A (2.14) BS02 ECL 1.14.-.- GO:0004497 ... A0R5U2 22037849 MOAD: Kd=0.098uM
    17989 3r9c:A (2.14) BS03 ECL 1.14.-.- GO:0004497 ... A0R5U2 22037849 MOAD: Kd=0.098uM
    17990 3r9d:A (1.95) BS01 X6B 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=4.15, IC50=71uM
    17991 3r9h:A (2.1) BS01 Z67 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=4.00, IC50>100uM
    17992 3r9n:A (1.75) BS01 Z68 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=5.85, IC50=1.4uM
    17993 3r9o:A (1.9) BS01 Z71 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=4.00, IC50>100uM
    17994 3r9w:A (2.05) BS01 rna ? GO:0000028 ... O67800 21646538 PDBbind: Kd=12.6nM
    17995 3rah:A (1.75) BS01 O1Z 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=7.92, IC50=12nM
    17996 3rak:A (1.75) BS01 03Z 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=6.89, IC50=0.13uM
    17997 3ral:A (1.75) BS01 04Z 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=7.00, IC50=0.1uM
    17998 3ras:A (2.55) BS03 DCV 1.1.1.267 GO:0000287 ... P9WNS1 21561155 BindingDB: Ki=1500nM, Kd=360nM
    17999 3ras:B (2.55) BS03 DCV 1.1.1.267 GO:0000287 ... P9WNS1 21561155 BindingDB: Ki=1500nM, Kd=360nM
    18000 3rbm:A (2.61) BS03 B73 ? GO:0004161 ... A5K4U6 22392982 PDBbind: -logKd/Ki=6.57, Ki=270nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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