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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    14801 3ii5:B (2.79) BS01 831 2.7.11.1 GO:0004672 ... P15056 19864136 BindingDB: IC50=24nM
    14802 3iiq:A (2.0) BS02 JZA 3.4.21.89 GO:0004252 ... P00803 19655811 MOAD: ic50=610uM
    14803 3iiq:B (2.0) BS02 JZA 3.4.21.89 GO:0004252 ... P00803 19655811 MOAD: ic50=610uM
    14804 3iit:A (1.8) BS03 D14 3.4.21.6 GO:0004252 ... P00742 19900814 MOAD: ic50=9.5nM
    PDBbind: -logKd/Ki=8.02, IC50=9.5nM
    BindingDB: IC50=9.5nM
    14805 3ijg:C (1.7) BS01 AVR 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 20534506 MOAD: Kd=54uM
    PDBbind: -logKd/Ki=4.27, Kd=54.0uM
    14806 3ijh:A (2.1) BS01 KO2 N/A N/A N/A 19767317 PDBbind: -logKd/Ki=4.00, Kd=100uM
    14807 3ijh:B (2.1) BS01 KO2 N/A N/A N/A 19767317 MOAD: Kd=100uM
    PDBbind: -logKd/Ki=4.00, Kd=100uM
    14808 3ijh:C (2.1) BS01 KO2 N/A N/A N/A 19767317 MOAD: Kd=100uM
    14809 3ijy:A (2.85) BS01 KDO N/A N/A N/A 19767317 PDBbind: -logKd/Ki=6.04, Kd=0.91uM
    14810 3ijy:B (2.85) BS01 KDO N/A N/A N/A 19767317 PDBbind: -logKd/Ki=6.04, Kd=0.91uM
    14811 3ijz:A (2.21) BS01 15C 2.1.1.45 GO:0004799 ... P00469 21696158 PDBbind: -logKd/Ki=5.22, Ki=6uM
    BindingDB: Ki=6000nM
    14812 3ik0:A (2.1) BS01 7C1 2.1.1.45 GO:0004799 ... P00469 21696158 BindingDB: Ki=9000nM
    14813 3ik1:A (2.25) BS01 20C 2.1.1.45 GO:0004799 ... P00469 21696158 PDBbind: -logKd/Ki=4.85, Ki=14uM
    BindingDB: Ki=14000nM
    14814 3ik3:A (1.9) BS01 0LI 2.7.10.2 GO:0004672 ... P00520 19878872 MOAD: ic50=2nM
    PDBbind: -logKd/Ki=8.70, IC50=2.0nM
    14815 3ik3:B (1.9) BS01 0LI 2.7.10.2 GO:0004672 ... P00520 19878872 MOAD: ic50=2nM
    14816 3ika:A (2.9) BS01 0UN 2.7.10.1 GO:0004672 ... P00533 20033049 PDBbind: -logKd/Ki=7.85, IC50=14nM
    BindingDB: IC50=<1nM, Kd=1.2nM, EC50=68nM
    14817 3ikc:A (2.6) BS01 KDO N/A N/A N/A 19767317 PDBbind: -logKd/Ki=7.46, Kd=0.035uM
    14818 3ikc:B (2.6) BS01 KME N/A N/A N/A 19767317 PDBbind: -logKd/Ki=7.46, Kd=0.035uM
    14819 3ikc:B (2.6) BS02 KDO N/A N/A N/A 19767317 PDBbind: -logKd/Ki=7.46, Kd=0.035uM
    14820 3ikd:A (2.0) BS01 J9Z 5.2.1.8 GO:0003755 ... Q13526 19729306 PDBbind: -logKd/Ki=6.75, Ki=0.179uM
    BindingDB: IC50=180nM, Ki=179nM
    14821 3ikd:B (2.0) BS01 J9Z 5.2.1.8 GO:0003755 ... Q13526 19729306 BindingDB: IC50=180nM, Ki=179nM
    14822 3ikf:A (2.07) BS02 717 4.6.1.12 GO:0008299 ... Q63T71 21359640 BindingDB: Kd=135000nM
    14823 3ikf:B (2.07) BS01 717 4.6.1.12 GO:0008299 ... Q63T71 21359640 BindingDB: Kd=135000nM
    14824 3ikf:B (2.07) BS03 717 4.6.1.12 GO:0008299 ... Q63T71 21359640 BindingDB: Kd=135000nM
    14825 3ikf:C (2.07) BS01 717 4.6.1.12 GO:0008299 ... Q63T71 21359640 BindingDB: Kd=135000nM
    14826 3ikf:C (2.07) BS02 717 4.6.1.12 GO:0008299 ... Q63T71 21359640 BindingDB: Kd=135000nM
    14827 3ikg:A (1.86) BS01 J8Z 5.2.1.8 GO:0003755 ... Q13526 19729306 PDBbind: -logKd/Ki=7.24, Ki=0.057uM
    14828 3il5:A (2.6) BS01 B82 2.3.1.180 GO:0004315 ... Q820T1 19665020 PDBbind: -logKd/Ki=5.80, IC50=1.6uM
    BindingDB: IC50=1600nM
    14829 3il5:B (2.6) BS01 B82 2.3.1.180 GO:0004315 ... Q820T1 19665020 PDBbind: -logKd/Ki=5.80, IC50=1.6uM
    BindingDB: IC50=1600nM
    14830 3il5:C (2.6) BS01 B82 2.3.1.180 GO:0004315 ... Q820T1 19665020 BindingDB: IC50=1600nM
    14831 3il5:D (2.6) BS01 B82 2.3.1.180 GO:0004315 ... Q820T1 19665020 BindingDB: IC50=1600nM
    14832 3il6:A (2.5) BS01 B83 2.3.1.180 GO:0004315 ... Q820T1 19665020 MOAD: ic50=0.27uM
    PDBbind: -logKd/Ki=6.57, IC50=0.27uM
    BindingDB: IC50=270nM
    14833 3ilq:C (2.05) BS01 1O2 ? N/A P11609 20080535 MOAD: Kd=6.2uM
    PDBbind: -logKd/Ki=5.21, Kd=6.2uM
    14834 3ilz:A (1.85) BS01 B72 ? GO:0003677 ... P10827 18237438 BindingDB: Kd=0.44nM, Ki=1.09nM, EC50=45nM
    14835 3imc:A (1.6) BS01 BZ3 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=1100uM
    PDBbind: -logKd/Ki=2.96, Kd=1100uM
    BindingDB: Kd=1100000nM
    14836 3imc:B (1.6) BS01 BZ3 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=1100uM
    BindingDB: Kd=1100000nM
    14837 3imd:A (2.0) BS01 FYQ ? N/A P62993 19886660 MOAD: Ka=560000M^-1
    14838 3imd:B (2.0) BS01 FYQ ? N/A P62993 19886660 MOAD: Ka=560000M^-1
    14839 3ime:A (2.39) BS01 BZ2 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=1000uM
    PDBbind: -logKd/Ki=3.00, Kd=1000uM
    BindingDB: Kd=1000000nM
    14840 3ime:B (2.39) BS01 BZ2 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=1000uM
    BindingDB: Kd=1000000nM
    14841 3img:A (1.8) BS01 BZ2 6.3.2.1 GO:0000287 ... P9WIL5 19780086 BindingDB: Kd=1000000nM
    14842 3img:A (1.8) BS02 BZ3 6.3.2.1 GO:0000287 ... P9WIL5 19780086 PDBbind: -logKd/Ki=2.96, Kd=1.1mM
    BindingDB: Kd=1100000nM
    14843 3img:B (1.8) BS01 BZ2 6.3.2.1 GO:0000287 ... P9WIL5 19780086 BindingDB: Kd=1000000nM
    14844 3img:B (1.8) BS02 BZ3 6.3.2.1 GO:0000287 ... P9WIL5 19780086 BindingDB: Kd=1100000nM
    14845 3imj:A (2.02) BS01 AYI ? N/A P62993 19886660 MOAD: Ka=2100000M^-1
    14846 3imj:B (2.02) BS01 AYI ? N/A P62993 19886660 MOAD: Ka=2100000M^-1
    14847 3imy:A (2.55) BS01 B72 ? GO:0003677 ... P10828 18237438 PDBbind: -logKd/Ki=9.70, Kd=0.2nM
    BindingDB: Kd=0.1nM, Ki=0.32nM, EC50=2.82nM
    14848 3in3:A (2.0) BS01 472 3.4.23.46 GO:0004190 ... P56817 20045648 MOAD: ic50=0.06uM
    PDBbind: -logKd/Ki=7.22, IC50=0.06uM
    BindingDB: IC50=60nM
    14849 3in4:A (2.3) BS01 BX2 3.4.23.46 GO:0004190 ... P56817 20045648 MOAD: ic50=0.04uM
    PDBbind: -logKd/Ki=7.52, IC50=0.03uM
    14850 3in7:A (2.0) BS01 AYQ ? N/A P62993 19886660 MOAD: Ka=1200000M^-1
    14851 3in7:C (2.0) BS01 AYQ ? N/A P62993 19886660 MOAD: Ka=1200000M^-1
    14852 3in8:A (1.7) BS01 FYI ? N/A P62993 19886660 MOAD: Ka=400000M^-1
    14853 3ind:A (2.246) BS01 593 3.4.23.46 GO:0004190 ... P56817 19968289 MOAD: ic50=1.53uM
    PDBbind: -logKd/Ki=5.82, IC50=1.53uM
    BindingDB: IC50=1530nM, EC50=930nM
    14854 3ine:A (1.996) BS01 X17 3.4.23.46 GO:0004190 ... P56817 19968289 MOAD: ic50=0.17uM
    PDBbind: -logKd/Ki=6.77, IC50=0.17uM
    BindingDB: EC50=130nM, IC50=170nM
    14855 3inf:A (1.852) BS01 X45 3.4.23.46 GO:0004190 ... P56817 19968289 MOAD: ic50=0.04uM
    PDBbind: -logKd/Ki=7.40, IC50=0.04uM
    BindingDB: IC50=40nM, EC50=120nM
    14856 3inh:A (1.8) BS01 569 3.4.23.46 GO:0004190 ... P56817 19968289 MOAD: ic50=0.02uM
    PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    BindingDB: IC50=20nM, EC50=270nM
    14857 3inq:A (2.0) BS01 X0J ? GO:0042981 ... Q07817 19726685 BindingDB: IC50=11nM
    14858 3inq:B (2.0) BS01 X0J ? GO:0042981 ... Q07817 19726685 BindingDB: IC50=11nM
    14859 3inw:A (1.95) BS01 JZB 3.6.4.10 GO:0005524 ... P07900 19856365 MOAD: ic50=0.039uM
    14860 3inx:A (1.75) BS01 JZC 3.6.4.10 GO:0005524 ... P07900 19856365 MOAD: ic50=0.022uM
    14861 3iny:A (2.75) BS01 7DG 2.4.2.1 GO:0000255 ... P00491 19932753 PDBbind: -logKd/Ki=3.66, Kd=217uM
    14862 3io7:A (2.6) BS01 1P5 2.7.10.2 GO:0004672 ... O60674 19857967 PDBbind: -logKd/Ki=7.77, Ki=0.017uM
    BindingDB: Ki=7nM, IC50=>20000nM
    14863 3iob:A (1.8) BS01 A4D 6.3.2.1 GO:0000287 ... P9WIL5 19827080 MOAD: Kd=380uM
    PDBbind: -logKd/Ki=3.42, Kd=380uM
    BindingDB: Kd=3.80e+5nM
    14864 3iob:B (1.8) BS01 A4D 6.3.2.1 GO:0000287 ... P9WIL5 19827080 MOAD: Kd=380uM
    BindingDB: Kd=3.80e+5nM
    14865 3ioc:A (2.5) BS01 A5D 6.3.2.1 GO:0000287 ... P9WIL5 19827080 MOAD: Kd=210uM
    PDBbind: -logKd/Ki=3.68, Kd=210uM
    BindingDB: Kd=210000nM
    14866 3ioc:B (2.5) BS01 A5D 6.3.2.1 GO:0000287 ... P9WIL5 19827080 MOAD: Kd=210uM
    BindingDB: Kd=210000nM
    14867 3iod:A (1.75) BS01 A6D 6.3.2.1 GO:0000287 ... P9WIL5 19827080 MOAD: Kd=80uM
    PDBbind: -logKd/Ki=4.10, Kd=80uM
    BindingDB: Kd=80000nM
    14868 3iod:B (1.75) BS01 A6D 6.3.2.1 GO:0000287 ... P9WIL5 19827080 MOAD: Kd=80uM
    BindingDB: Kd=80000nM
    14869 3ioe:A (1.95) BS01 A7D 6.3.2.1 GO:0000287 ... P9WIL5 19827080 MOAD: Kd=540uM
    PDBbind: -logKd/Ki=3.27, Kd=540uM
    14870 3ioe:B (1.95) BS01 A7D 6.3.2.1 GO:0000287 ... P9WIL5 19827080 MOAD: Kd=540uM
    14871 3iof:A (1.44) BS02 IFS 3.5.2.6 GO:0008270 ... P26918 20527888 MOAD: Ki=6uM
    PDBbind: -logKd/Ki=5.22, Ki=6uM
    BindingDB: Ki=2000nM
    14872 3iog:A (1.41) BS02 SDF 3.5.2.6 GO:0008270 ... P26918 20527888 MOAD: Ki=3uM
    PDBbind: -logKd/Ki=5.52, Ki=3uM
    BindingDB: Ki=5000nM
    14873 3ioi:A (1.45) BS02 1GW 2.4.1.37
    2.4.1.40    		 GO:0005975 ... P16442 20364127 MOAD: Ki=0.53uM
    PDBbind: -logKd/Ki=6.28, Ki=0.53uM
    14874 3iok:A (2.1) BS01 1P6 2.7.10.2 GO:0004672 ... O60674 19857967 MOAD: Ki=0.0002uM
    PDBbind: -logKd/Ki=7.96, Ki=0.011uM
    14875 3ion:A (2.4) BS01 8H1 2.7.11.1 GO:0004672 ... O15530 20074837 MOAD: ic50=8nM
    PDBbind: -logKd/Ki=8.10, IC50=8nM
    BindingDB: IC50=8nM
    14876 3iop:A (2.2) BS01 8I1 2.7.11.1 GO:0004672 ... O15530 20074837 MOAD: ic50=17nM
    PDBbind: -logKd/Ki=7.77, IC50=17nM
    BindingDB: IC50=17nM
    14877 3ip5:A (1.35) BS01 ALA ? GO:0006865 ... Q7CX36 20630861 MOAD: Kd=0.6uM
    PDBbind: -logKd/Ki=6.22, Kd=0.6uM
    14878 3ip6:A (1.4) BS01 PRO ? GO:0006865 ... Q7CX36 20630861 MOAD: Kd=0.25uM
    PDBbind: -logKd/Ki=6.60, Kd=0.25uM
    14879 3ip8:A (1.498) BS01 B85 4.1.1.76 GO:0016831 ... Q05115 19739187 MOAD: Ki=5.2mM
    PDBbind: -logKd/Ki=2.28, Ki=5.2mM
    14880 3ip9:A (1.8) BS01 ABU ? GO:0006865 ... Q7CX36 20630861 MOAD: Kd=2.4uM
    PDBbind: -logKd/Ki=5.62, Kd=2.4uM
    14881 3ipa:A (1.55) BS01 ALA ? GO:0006865 ... Q7CX36 20630861 PDBbind: -logKd/Ki=6.22, Kd=0.6uM
    14882 3ipb:A (1.9) BS01 JZD ? GO:0005179 ... P02766 21059958 MOAD: ic50=0.2uM
    PDBbind: -logKd/Ki=6.70, IC50=0.2uM
    14883 3ipb:A (1.9) BS02 JZD ? GO:0005179 ... P02766 21059958 MOAD: ic50=0.2uM
    PDBbind: -logKd/Ki=6.70, IC50=0.2uM
    14884 3ipb:B (1.9) BS01 JZD ? GO:0005179 ... P02766 21059958 MOAD: ic50=0.2uM
    PDBbind: -logKd/Ki=6.70, IC50=0.2uM
    14885 3ipb:B (1.9) BS02 JZD ? GO:0005179 ... P02766 21059958 MOAD: ic50=0.2uM
    PDBbind: -logKd/Ki=6.70, IC50=0.2uM
    14886 3ipe:A (1.4) BS01 JZE ? GO:0005179 ... P02766 21059958 PDBbind: -logKd/Ki=6.82, IC50=0.15uM
    14887 3ipe:B (1.4) BS01 JZE ? GO:0005179 ... P02766 21059958 MOAD: ic50=0.15uM
    PDBbind: -logKd/Ki=6.82, IC50=0.15uM
    14888 3iph:A (2.1) BS01 G11 2.7.11.24 GO:0000077 ... Q16539 19772287 MOAD: Ki=0.0000251mM
    PDBbind: -logKd/Ki=7.60, Ki=25.1nM
    BindingDB: IC50=316.23nM, Ki=25.12nM
    14889 3ipq:A (2.0) BS02 965 ? GO:0003677 ... Q13133 20382159 MOAD: Ki=27nM
    PDBbind: -logKd/Ki=7.57, Ki=27nM
    BindingDB: EC50=200nM, IC50=235nM
    14890 3ips:A (2.26) BS02 O90 ? GO:0003677 ... Q13133 20382159 MOAD: Ki=64nM
    PDBbind: -logKd/Ki=7.19, Ki=64nM
    BindingDB: EC50=35nM, IC50=32nM
    14891 3ips:B (2.26) BS02 O90 ? GO:0003677 ... Q13133 20382159 MOAD: Ki=64nM
    BindingDB: EC50=35nM, IC50=32nM
    14892 3ipu:A (2.4) BS02 O40 ? GO:0003677 ... Q13133 20382159 MOAD: Ki=48nM
    PDBbind: -logKd/Ki=7.32, Ki=48nM
    14893 3ipu:B (2.4) BS02 O40 ? GO:0003677 ... Q13133 20382159 MOAD: Ki=48nM
    14894 3ipx:A (2.0) BS02 B86 2.7.1.113
    2.7.1.74
    2.7.1.76    		 GO:0004136 ... P27707 19836232 MOAD: ic50=120nM
    PDBbind: -logKd/Ki=6.92, IC50=120nM
    BindingDB: IC50=>4000nM
    14895 3ipy:A (2.54) BS01 B87 2.7.1.113
    2.7.1.74
    2.7.1.76    		 GO:0004136 ... P27707 19836232 BindingDB: IC50=510nM
    14896 3ipy:A (2.54) BS02 B87 2.7.1.113
    2.7.1.74
    2.7.1.76    		 GO:0004136 ... P27707 19836232 BindingDB: IC50=510nM
    14897 3ipy:B (2.54) BS01 B87 2.7.1.113
    2.7.1.74
    2.7.1.76    		 GO:0004136 ... P27707 19836232 BindingDB: IC50=510nM
    14898 3ipy:B (2.54) BS02 B87 2.7.1.113
    2.7.1.74
    2.7.1.76    		 GO:0004136 ... P27707 19836232 BindingDB: IC50=510nM
    14899 3iqv:A (1.2) BS02 FSC ? GO:0000122 ... P31947 20679480 MOAD: Kd=6.6uM
    14900 3irw:P (2.7) BS01 rna ? GO:0003676 ... P09012 19898477 PDBbind: Kd=10pM
    14901 3irx:A (2.8) BS01 UDR 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 19775161 PDBbind: -logKd/Ki=9.00, IC50=1.0nM
    14902 3is9:A (2.55) BS01 AC7 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 19775161 PDBbind: -logKd/Ki=6.42, IC50=0.38uM
    14903 3isd:A (2.6) BS08 F2A 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 19759017 BindingDB: Ki=5000nM
    14904 3isj:A (2.2) BS01 A8D 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=210uM
    PDBbind: -logKd/Ki=3.68, Kd=210uM
    14905 3isj:B (2.2) BS01 A8D 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=210uM
    14906 3isn:C (2.5) BS01 EDM 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P03366 20135654 MOAD: Ki=8nM
    14907 3iss:A (2.5) BS01 EPU 2.5.1.7 GO:0003824 ... P0A749 19899805 PDBbind: -logKd/Ki=6.05, Ki=0.9uM
    14908 3iti:A (1.55) BS01 BRV 3.4.21.4 GO:0004175 ... P00760 19851024 MOAD: ic50=0.27uM
    14909 3itz:A (2.25) BS01 P66 2.7.11.24 GO:0000077 ... Q16539 20138761 MOAD: ic50=1.4nM
    PDBbind: -logKd/Ki=8.85, IC50=1.4nM
    BindingDB: IC50=1.4nM, Ki=1.000000nM
    14910 3iu7:A (1.4) BS03 FCD 3.4.11.18 GO:0004177 ... P9WK19 20038112 MOAD: ic50=16uM
    PDBbind: -logKd/Ki=4.80, IC50=16uM
    14911 3iu7:A (1.4) BS04 FCD 3.4.11.18 GO:0004177 ... P9WK19 20038112 MOAD: ic50=16uM
    PDBbind: -logKd/Ki=4.80, IC50=16uM
    14912 3iu8:A (1.85) BS01 T03 3.4.11.18 GO:0004177 ... P9WK19 20038112 MOAD: ic50=0.58uM
    PDBbind: -logKd/Ki=6.24, IC50=0.58uM
    14913 3iu9:A (1.75) BS01 T07 3.4.11.18 GO:0004177 ... P9WK19 20038112 MOAD: ic50=0.24uM
    PDBbind: -logKd/Ki=6.62, IC50=0.24uM
    14914 3iub:A (1.5) BS01 FG2 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=29uM
    PDBbind: -logKd/Ki=4.54, Kd=29uM
    BindingDB: Kd=29000nM
    14915 3iub:A (1.5) BS02 FG2 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=29uM
    PDBbind: -logKd/Ki=4.54, Kd=29uM
    BindingDB: Kd=29000nM
    14916 3iub:B (1.5) BS01 FG2 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=29uM
    BindingDB: Kd=29000nM
    14917 3iuc:A (2.4) BS01 ADP 3.6.4.10 GO:0005524 ... P11021 20072699 PDBbind: -logKd/Ki=5.66, Kd=2.17uM
    14918 3iue:A (1.73) BS01 FG3 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=1.5uM
    PDBbind: -logKd/Ki=5.82, Kd=1.5uM
    BindingDB: Kd=1500nM
    14919 3iue:A (1.73) BS02 FG3 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=1.5uM
    PDBbind: -logKd/Ki=5.82, Kd=1.5uM
    BindingDB: Kd=1500nM
    14920 3iue:B (1.73) BS01 FG3 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=1.5uM
    BindingDB: Kd=1500nM
    14921 3iut:A (1.2) BS01 KB2 3.4.22.51 GO:0006508 ... P25779 20088534 PDBbind: -logKd/Ki=6.34, Ki=0.46uM
    14922 3iv5:A (2.9) BS01 dna ? GO:0000786 ... P0A6R3 20395367 PDBbind: Kd=0.2nM
    14923 3iv5:A (2.9) BS02 dna ? GO:0000786 ... P0A6R3 20395367 PDBbind: Kd=0.2nM
    14924 3iv5:B (2.9) BS01 dna ? GO:0000786 ... P0A6R3 20395367 PDBbind: Kd=0.2nM
    14925 3iv5:B (2.9) BS02 dna ? GO:0000786 ... P0A6R3 20395367 PDBbind: Kd=0.2nM
    14926 3ivc:A (2.13) BS01 FG4 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=75uM
    PDBbind: -logKd/Ki=4.12, Kd=75uM
    14927 3ivc:B (2.13) BS01 FG4 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=75uM
    14928 3ivg:B (1.95) BS01 FG5 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=50uM
    PDBbind: -logKd/Ki=4.30, Kd=50uM
    14929 3ivh:A (1.8) BS01 1LI 3.4.23.46 GO:0004190 ... P56817 19811916 MOAD: ic50=47nM
    PDBbind: -logKd/Ki=7.33, IC50=47nM
    BindingDB: IC50=47nM
    14930 3ivi:A (2.2) BS01 2LI 3.4.23.46 GO:0004190 ... P56817 19811916 MOAD: ic50=12nM
    PDBbind: -logKd/Ki=7.92, IC50=12nM
    14931 3ivi:B (2.2) BS01 2LI 3.4.23.46 GO:0004190 ... P56817 19811916 MOAD: ic50=12nM
    14932 3ivi:C (2.2) BS01 2LI 3.4.23.46 GO:0004190 ... P56817 19811916 MOAD: ic50=12nM
    14933 3ivx:A (1.73) BS01 FG6 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=1.8uM
    PDBbind: -logKd/Ki=5.74, Kd=1.8uM
    BindingDB: Kd=1800nM
    14934 3ivx:A (1.73) BS02 FG6 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=1.8uM
    PDBbind: -logKd/Ki=5.74, Kd=1.8uM
    BindingDB: Kd=1800nM
    14935 3ivx:B (1.73) BS01 FG6 6.3.2.1 GO:0000287 ... P9WIL5 19780086 MOAD: Kd=1.8uM
    BindingDB: Kd=1800nM
    14936 3iw2:A (2.19) BS01 EKO 1.14.15.29 GO:0004497 ... P9WPP1 19846552 MOAD: Kd=11.7uM
    14937 3iw4:A (2.8) BS01 LW4 2.7.11.13 GO:0004672 ... P17252 19827831 PDBbind: -logKd/Ki=8.68, IC50=2.1nM
    BindingDB: IC50=2.1nM
    14938 3iw4:B (2.8) BS01 LW4 2.7.11.13 GO:0004672 ... P17252 19827831 BindingDB: IC50=2.1nM
    14939 3iw4:C (2.8) BS01 LW4 2.7.11.13 GO:0004672 ... P17252 19827831 BindingDB: IC50=2.1nM
    14940 3iw5:A (2.5) BS01 DF3 2.7.11.24 GO:0000077 ... Q16539 19950957 MOAD: Kd=0.839uM
    PDBbind: -logKd/Ki=6.08, Kd=0.839uM
    14941 3iw6:A (2.1) BS01 PP0 2.7.11.24 GO:0000077 ... Q16539 19950957 MOAD: Kd=3.29uM
    PDBbind: -logKd/Ki=5.48, Kd=3.29uM
    14942 3iw7:A (2.4) BS01 IPK 2.7.11.24 GO:0000077 ... Q16539 19950957 PDBbind: -logKd/Ki=5.64, Kd=2.3uM
    14943 3iw8:A (2.0) BS01 HIZ 2.7.11.24 GO:0000077 ... Q16539 19950957 MOAD: Kd=13.4uM
    PDBbind: -logKd/Ki=4.87, Kd=13.4uM
    14944 3iwe:A (1.79) BS02 646 2.3.1.-
    2.3.1.97    		 GO:0004379 ... P30419 N/A BindingDB: Ki=11nM, IC50=4.0nM
    14945 3iwe:B (1.79) BS02 646 2.3.1.-
    2.3.1.97    		 GO:0004379 ... P30419 N/A BindingDB: Ki=11nM, IC50=4.0nM
    14946 3iwn:C (3.2) BS01 rna ? GO:0003676 ... P09012 19898478 PDBbind: Kd=1nM
    14947 3iwn:D (3.2) BS01 rna ? GO:0003676 ... P09012 19898478 PDBbind: Kd=1nM
    14948 3iwn:D (3.2) BS02 rna ? GO:0003676 ... P09012 19898478 PDBbind: Kd=1nM
    14949 3iww:A (2.3) BS04 YZE 3.4.17.21 GO:0004180 ... Q04609 19897367 MOAD: Ki=11nM
    PDBbind: -logKd/Ki=7.96, Ki=11nM
    BindingDB: Ki=11nM
    14950 3ix1:A (2.4) BS01 NFM ? GO:0005886 ... Q9K9G5 20873853 MOAD: Kd=200nM
    14951 3ix1:B (2.4) BS01 NFM ? GO:0005886 ... Q9K9G5 20873853 MOAD: Kd=200nM
    14952 3ix2:A (2.1) BS02 AC2 2.4.2.1 GO:0003824 ... P9WP01 22033138 BindingDB: Kd=12589nM
    14953 3ix2:B (2.1) BS02 AC2 2.4.2.1 GO:0003824 ... P9WP01 22033138 BindingDB: Kd=12589nM
    14954 3ix2:C (2.1) BS02 AC2 2.4.2.1 GO:0003824 ... P9WP01 22033138 BindingDB: Kd=12589nM
    14955 3ix3:A (1.4) BS01 OHN ? N/A P25084 N/A BindingDB: EC50=139nM
    14956 3ix3:B (1.4) BS01 OHN ? N/A P25084 N/A BindingDB: EC50=139nM
    14957 3ix4:A (1.8) BS01 TX1 ? N/A P25084 19778724 BindingDB: EC50=28nM
    14958 3ix4:B (1.8) BS01 TX1 ? N/A P25084 19778724 BindingDB: EC50=28nM
    14959 3ix4:C (1.8) BS01 TX1 ? N/A P25084 19778724 BindingDB: EC50=28nM
    14960 3ix4:D (1.8) BS01 TX1 ? N/A P25084 19778724 BindingDB: EC50=28nM
    14961 3ix4:E (1.8) BS01 TX1 ? N/A P25084 19778724 BindingDB: EC50=28nM
    14962 3ix4:F (1.8) BS01 TX1 ? N/A P25084 19778724 BindingDB: EC50=28nM
    14963 3ix4:G (1.8) BS01 TX1 ? N/A P25084 19778724 BindingDB: EC50=28nM
    14964 3ix4:H (1.8) BS01 TX1 ? N/A P25084 19778724 BindingDB: EC50=28nM
    14965 3ix9:A (1.95) BS02 MTX 1.5.1.3 GO:0004146 ... Q54801 19950924 MOAD: Ki=3.9nM
    14966 3ix9:B (1.95) BS02 MTX 1.5.1.3 GO:0004146 ... Q54801 19950924 MOAD: Ki=3.9nM
    14967 3ixb:A (1.63) BS01 BZB 3.5.2.6 GO:0008800 ... P00811 19913034 BindingDB: IC50=200nM, Ki=27nM
    14968 3ixb:B (1.63) BS01 BZB 3.5.2.6 GO:0008800 ... P00811 19913034 BindingDB: IC50=200nM, Ki=27nM
    14969 3ixg:B (2.14) BS01 BZB 3.5.2.6 GO:0008800 ... P00811 19913034 PDBbind: -logKd/Ki=7.57, Ki=27nM
    BindingDB: IC50=200nM, Ki=27nM
    14970 3ixj:A (2.2) BS01 586 3.4.23.46 GO:0004190 ... P56817 20128595 MOAD: ic50=0.32nM
    PDBbind: -logKd/Ki=9.49, IC50=0.32nM
    BindingDB: Ki=<1nM, IC50=0.320000nM
    14971 3ixj:B (2.2) BS01 586 3.4.23.46 GO:0004190 ... P56817 20128595 MOAD: ic50=0.32nM
    BindingDB: Ki=<1nM, IC50=0.320000nM
    14972 3ixj:C (2.2) BS01 586 3.4.23.46 GO:0004190 ... P56817 20128595 MOAD: ic50=0.32nM
    BindingDB: Ki=<1nM, IC50=0.320000nM
    14973 3ixk:A (2.5) BS01 929 3.4.23.46 GO:0004190 ... P56817 20036448 MOAD: ic50=6.6nM
    PDBbind: -logKd/Ki=8.18, IC50=6.6nM
    BindingDB: IC50=4500nM
    14974 3ixk:B (2.5) BS01 929 3.4.23.46 GO:0004190 ... P56817 20036448 MOAD: ic50=6.6nM
    BindingDB: IC50=4500nM
    14975 3ixk:C (2.5) BS01 929 3.4.23.46 GO:0004190 ... P56817 20036448 MOAD: ic50=6.6nM
    BindingDB: IC50=4500nM
    14976 3j6g:B (5.5) BS02 TA1 ? GO:0000226 ... P02554 24855948 BindingDB: EC50=520nM
    14977 3j6g:D (5.5) BS02 TA1 ? GO:0000226 ... P02554 24855948 BindingDB: EC50=520nM
    14978 3j6g:F (5.5) BS02 TA1 ? GO:0000226 ... P02554 24855948 BindingDB: EC50=520nM
    14979 3j6g:H (5.5) BS02 TA1 ? GO:0000226 ... P02554 24855948 BindingDB: EC50=520nM
    14980 3j6g:J (5.5) BS02 TA1 ? GO:0000226 ... P02554 24855948 BindingDB: EC50=520nM
    14981 3j6g:L (5.5) BS02 TA1 ? GO:0000226 ... P02554 24855948 BindingDB: EC50=520nM
    14982 3j6g:N (5.5) BS02 TA1 ? GO:0000226 ... P02554 24855948 BindingDB: EC50=520nM
    14983 3j6g:P (5.5) BS02 TA1 ? GO:0000226 ... P02554 24855948 BindingDB: EC50=520nM
    14984 3j6g:R (5.5) BS02 TA1 ? GO:0000226 ... P02554 24855948 BindingDB: EC50=520nM
    14985 3j6p:B (8.2) BS02 TA1 ? GO:0000226 ... P02554 25583999 BindingDB: EC50=520nM
    14986 3jdw:A (2.4) BS01 ORN 2.1.4.1 GO:0005515 ... P50440 9218780 MOAD: Ki=253uM
    PDBbind: -logKd/Ki=3.60, Ki=253uM
    14987 3jpv:A (2.35) BS02 1DR 2.7.11.1 GO:0004672 ... P11309 19788246 MOAD: ic50=0.12uM
    PDBbind: -logKd/Ki=6.92, IC50=0.12uM
    BindingDB: IC50=120nM
    14988 3jq6:A (1.8) BS02 DX1 1.5.1.33 GO:0016491 ... Q581W1 19916554 MOAD: Ki=3.3uM
    14989 3jq6:B (1.8) BS02 DX1 1.5.1.33 GO:0016491 ... Q581W1 19916554 MOAD: Ki=3.3uM
    14990 3jq6:C (1.8) BS02 DX1 1.5.1.33 GO:0016491 ... Q581W1 19916554 MOAD: Ki=3.3uM
    14991 3jq6:D (1.8) BS01 DX1 1.5.1.33 GO:0016491 ... Q581W1 19916554 MOAD: Ki=3.3uM
    14992 3jq7:A (1.8) BS02 DX2 1.5.1.33 GO:0016491 ... Q581W1 19916554 MOAD: Ki=1.2uM
    PDBbind: -logKd/Ki=5.92, Ki=1.2uM
    14993 3jq7:B (1.8) BS02 DX2 1.5.1.33 GO:0016491 ... Q581W1 19916554 MOAD: Ki=1.2uM
    14994 3jq7:C (1.8) BS02 DX2 1.5.1.33 GO:0016491 ... Q581W1 19916554 MOAD: Ki=1.2uM
    14995 3jq7:D (1.8) BS02 DX2 1.5.1.33 GO:0016491 ... Q581W1 19916554 MOAD: Ki=1.2uM
    14996 3jq8:A (1.95) BS02 DX3 1.5.1.33 GO:0016491 ... Q581W1 19916554 MOAD: Ki>35uM
    PDBbind: -logKd/Ki=4.46, Ki=35uM
    14997 3jq8:B (1.95) BS02 DX3 1.5.1.33 GO:0016491 ... Q581W1 19916554 MOAD: Ki>35uM
    14998 3jq8:C (1.95) BS02 DX3 1.5.1.33 GO:0016491 ... Q581W1 19916554 MOAD: Ki>35uM
    14999 3jq8:D (1.95) BS02 DX3 1.5.1.33 GO:0016491 ... Q581W1 19916554 MOAD: Ki>35uM
    15000 3jq9:A (2.3) BS02 AX1 1.5.1.33 GO:0016491 ... Q581W1 19916554 MOAD: Ki=0.4uM
    PDBbind: -logKd/Ki=6.40, Ki=0.4uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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