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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    14601 3hr1:A (1.53) BS01 PF9 3.1.4.17 GO:0004114 ... Q9QYJ6 19630403 MOAD: ic50=0.37nM
    PDBbind: -logKd/Ki=9.43, IC50=0.37nM
    BindingDB: IC50=0.5nM, Ki=0.17nM
    14602 3hrb:A (2.2) BS01 I39 2.7.11.24 GO:0000077 ... Q16539 19678708 MOAD: ic50=21nM
    PDBbind: -logKd/Ki=7.68, IC50=21nM
    BindingDB: IC50=21nM
    14603 3hrf:A (1.9) BS02 P47 2.7.11.1 GO:0004672 ... O15530 19718043 MOAD: Kd=10.3uM
    PDBbind: -logKd/Ki=4.99, Kd=10.3uM
    BindingDB: Kd=10300nM, IC50=9.7e+4nM
    14604 3hs4:A (1.1) BS03 AZM 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19851004 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    BindingDB: Ki=12nM, Kd=17nM, IC50=10nM
    14605 3hs4:A (1.1) BS04 AZM 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19851004 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    BindingDB: Ki=12nM, Kd=17nM, IC50=10nM
    14606 3hs4:A (1.1) BS05 AZM 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19851004 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    BindingDB: Ki=12nM, Kd=17nM, IC50=10nM
    14607 3ht3:A (1.7) BS01 dna 2.7.7.7 GO:0000166 ... D9N168 21454515 PDBbind: Kd=12uM
    14608 3ht3:A (1.7) BS02 dna 2.7.7.7 GO:0000166 ... D9N168 21454515 PDBbind: Kd=12uM
    14609 3ht3:D (1.7) BS01 dna 2.7.7.7 GO:0000166 ... D9N168 21454515 PDBbind: Kd=12uM
    14610 3ht3:D (1.7) BS02 dna 2.7.7.7 GO:0000166 ... D9N168 21454515 PDBbind: Kd=12uM
    14611 3ht6:A (1.59) BS01 JZ0 3.2.1.17 GO:0003796 ... P00720 19782087 MOAD: Kd=0.36mM
    14612 3ht7:A (1.7) BS01 JZ1 3.2.1.17 GO:0003796 ... P00720 19782087 MOAD: Kd=0.28mM
    14613 3ht8:A (1.6) BS01 JZ2 3.2.1.17 GO:0003796 ... P00720 19782087 MOAD: Kd=0.12mM
    14614 3htb:A (1.81) BS01 JZ4 3.2.1.17 GO:0003796 ... P00720 19782087 MOAD: Kd=73.9uM
    14615 3hu1:A (2.81) BS01 AGS 3.6.4.6 GO:0005524 ... P55072 20512113 PDBbind: -logKd/Ki=6.89, Kd=0.13uM
    14616 3hu1:A (2.81) BS02 AGS 3.6.4.6 GO:0005524 ... P55072 20512113 PDBbind: -logKd/Ki=6.89, Kd=0.13uM
    14617 3hu1:B (2.81) BS01 AGS 3.6.4.6 GO:0005524 ... P55072 20512113 PDBbind: -logKd/Ki=6.89, Kd=0.13uM
    14618 3hu1:B (2.81) BS02 AGS 3.6.4.6 GO:0005524 ... P55072 20512113 PDBbind: -logKd/Ki=6.89, Kd=0.13uM
    14619 3hu2:A (2.85) BS01 AGS 3.6.4.6 GO:0005524 ... P55072 20512113 PDBbind: -logKd/Ki=7.22, Kd=0.06uM
    14620 3hu2:A (2.85) BS02 AGS 3.6.4.6 GO:0005524 ... P55072 20512113 PDBbind: -logKd/Ki=7.22, Kd=0.06uM
    14621 3hu2:B (2.85) BS01 AGS 3.6.4.6 GO:0005524 ... P55072 20512113 PDBbind: -logKd/Ki=7.22, Kd=0.06uM
    14622 3hu2:B (2.85) BS02 AGS 3.6.4.6 GO:0005524 ... P55072 20512113 PDBbind: -logKd/Ki=7.22, Kd=0.06uM
    14623 3hu3:A (2.2) BS01 AGS 3.6.4.6 GO:0005524 ... P55072 20512113 MOAD: Kd=0.13uM
    PDBbind: -logKd/Ki=6.89, Kd=0.13uM
    14624 3hu3:B (2.2) BS01 AGS 3.6.4.6 GO:0005524 ... P55072 20512113 MOAD: Kd=0.13uM
    PDBbind: -logKd/Ki=6.89, Kd=0.13uM
    14625 3hu8:A (1.8) BS01 261 3.2.1.17 GO:0003796 ... P00720 19782087 MOAD: Kd=0.79mM
    14626 3hua:A (1.4) BS01 JZ9 3.2.1.17 GO:0003796 ... P00720 19782087 MOAD: Kd=0.278mM
    14627 3hub:A (2.25) BS01 469 2.7.11.24 GO:0000077 ... Q16539 20201574 MOAD: Kd=8.2nM
    PDBbind: -logKd/Ki=8.09, Kd=8.2nM
    BindingDB: IC50=9nM, Kd=0.480000nM
    14628 3huc:A (1.8) BS01 G97 2.7.11.24 GO:0000077 ... Q16539 20201574 MOAD: Kd=1030nM
    PDBbind: -logKd/Ki=5.99, Kd=1030nM
    14629 3huk:A (1.29) BS01 J0Z 3.2.1.17 GO:0003796 ... P00720 19782087 MOAD: Kd=0.35mM
    14630 3huq:A (1.45) BS01 J1Z 3.2.1.17 GO:0003796 ... P00720 19782087 MOAD: Kd=0.25mM
    14631 3hv3:A (2.0) BS01 R49 2.7.11.24 GO:0000077 ... Q16539 19928858 MOAD: ic50=900nM
    PDBbind: -logKd/Ki=6.33, IC50=470nM
    BindingDB: IC50=900nM
    14632 3hv4:A (2.6) BS01 L51 2.7.11.24 GO:0000077 ... Q16539 19928858 PDBbind: -logKd/Ki=6.51, IC50=310nM
    BindingDB: IC50=290nM
    14633 3hv4:B (2.6) BS01 L51 2.7.11.24 GO:0000077 ... Q16539 19928858 BindingDB: IC50=290nM
    14634 3hv5:A (2.25) BS01 R24 2.7.11.24 GO:0000077 ... Q16539 19928858 MOAD: ic50=150nM
    PDBbind: -logKd/Ki=7.02, IC50=95nM
    BindingDB: IC50=95nM
    14635 3hv5:B (2.25) BS01 R24 2.7.11.24 GO:0000077 ... Q16539 19928858 MOAD: ic50=150nM
    BindingDB: IC50=95nM
    14636 3hv6:A (1.95) BS01 R39 2.7.11.24 GO:0000077 ... Q16539 19928858 MOAD: ic50=5500nM
    PDBbind: -logKd/Ki=5.64, IC50=2300nM
    BindingDB: IC50=5500nM, koff=0.003900s-1, kon=13000M-1-s-1, Kd=300nM
    14637 3hv7:A (2.4) BS01 1AU 2.7.11.24 GO:0000077 ... Q16539 19928858 MOAD: Kd~12nM
    PDBbind: -logKd/Ki=7.92, Kd=12nM
    BindingDB: Kd=12nM, IC50=170nM
    14638 3hv8:A (1.445) BS01 C2E 3.1.4.52 N/A Q9HUK6 19679088 MOAD: Kd=104.2nM
    PDBbind: -logKd/Ki=6.98, Kd=104.2nM
    14639 3hvc:A (2.1) BS01 GG5 2.7.11.24 GO:0000077 ... Q16539 19501598 MOAD: ic50=600nM
    PDBbind: -logKd/Ki=6.22, IC50=600nM
    BindingDB: Ki=600nM, IC50=67nM
    14640 3hvc:A (2.1) BS02 GG5 2.7.11.24 GO:0000077 ... Q16539 19501598 MOAD: ic50=600nM
    PDBbind: -logKd/Ki=6.22, IC50=600nM
    BindingDB: Ki=600nM, IC50=67nM
    14641 3hvg:A (2.26) BS01 EV0 3.4.23.46 GO:0004190 ... P56817 19799414 MOAD: ic50~2mM
    PDBbind: -logKd/Ki=2.70, IC50=2mM
    BindingDB: Kd=4450000nM
    14642 3hvg:B (2.26) BS01 EV0 3.4.23.46 GO:0004190 ... P56817 19799414 MOAD: ic50~2mM
    BindingDB: Kd=4450000nM
    14643 3hvg:B (2.26) BS02 EV0 3.4.23.46 GO:0004190 ... P56817 19799414 MOAD: ic50~2mM
    BindingDB: Kd=4450000nM
    14644 3hvh:A (1.3) BS01 542 2.1.1.6 GO:0000287 ... P22734 19882607 MOAD: Ki=3nM
    PDBbind: -logKd/Ki=8.52, Ki=3nM
    14645 3hvi:A (1.2) BS02 619 2.1.1.6 GO:0000287 ... P22734 19882607 MOAD: Ki=5nM
    PDBbind: -logKd/Ki=8.30, Ki=5nM
    14646 3hvj:A (1.79) BS01 705 2.1.1.6 GO:0000287 ... P22734 19882607 MOAD: Ki=2nM
    PDBbind: -logKd/Ki=8.70, Ki=2nM
    14647 3hvj:B (1.79) BS01 705 2.1.1.6 GO:0000287 ... P22734 19882607 MOAD: Ki=2nM
    14648 3hvk:A (1.3) BS02 719 2.1.1.6 GO:0000287 ... P22734 19882607 MOAD: Ki=3nM
    PDBbind: -logKd/Ki=8.52, Ki=3nM
    14649 3hvo:A (2.0) BS01 VGI 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26661 N/A BindingDB: IC50=180nM, EC50=11000nM
    14650 3hvo:B (2.0) BS01 VGI 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26661 N/A BindingDB: IC50=180nM, EC50=11000nM
    14651 3hw1:A (2.48) BS01 EV2 3.4.23.46 GO:0004190 ... P56817 19799414 MOAD: ic50=0.87mM
    PDBbind: -logKd/Ki=3.06, IC50=0.87mM
    14652 3hw1:B (2.48) BS01 EV2 3.4.23.46 GO:0004190 ... P56817 19799414 MOAD: ic50=0.87mM
    14653 3hw1:C (2.48) BS01 EV2 3.4.23.46 GO:0004190 ... P56817 19799414 MOAD: ic50=0.87mM
    14654 3hwn:A (2.33) BS01 BD3 3.4.22.15 GO:0006508 ... P07711 19616430 PDBbind: -logKd/Ki=8.70, IC50=2nM
    14655 3hww:A (1.95) BS01 AKG 2.2.1.9 GO:0000287 ... P17109 19703421 MOAD: Kd=75nM
    PDBbind: -logKd/Ki=7.12, Kd=75nM
    14656 3hww:D (1.95) BS01 AKG 2.2.1.9 GO:0000287 ... P17109 19703421 MOAD: Kd=75nM
    PDBbind: -logKd/Ki=7.12, Kd=75nM
    14657 3hwx:A (2.6) BS01 TPP 2.2.1.9 GO:0000287 ... P17109 19703421 PDBbind: -logKd/Ki=7.86, Kd=13.9nM
    14658 3hwx:A (2.6) BS03 TPP 2.2.1.9 GO:0000287 ... P17109 19703421 PDBbind: -logKd/Ki=7.86, Kd=13.9nM
    14659 3hwx:B (2.6) BS01 TPP 2.2.1.9 GO:0000287 ... P17109 19703421 PDBbind: -logKd/Ki=7.86, Kd=13.9nM
    14660 3hwx:B (2.6) BS02 TPP 2.2.1.9 GO:0000287 ... P17109 19703421 PDBbind: -logKd/Ki=7.86, Kd=13.9nM
    14661 3hx3:A (1.69) BS01 RET ? GO:0005502 ... P12271 19846785 MOAD: Kd~10nM
    PDBbind: -logKd/Ki=8.00, Kd=10nM
    14662 3hxb:B (2.25) BS01 BD5 2.5.1.60 GO:0003824 ... Q08603 19894725 PDBbind: -logKd/Ki=5.39, IC50=4.1uM
    14663 3hxc:B (1.95) BS03 BD6 2.5.1.60 GO:0003824 ... Q08603 19894725 PDBbind: -logKd/Ki=5.28, IC50=5.2uM
    14664 3hxd:B (1.95) BS03 BD7 2.5.1.60 GO:0003824 ... Q08603 19894725 PDBbind: -logKd/Ki=5.05, IC50=9uM
    14665 3hxe:B (1.95) BS03 BD8 2.5.1.60 GO:0003824 ... Q08603 19894725 PDBbind: -logKd/Ki=5.33, IC50=4.7uM
    14666 3hxf:B (1.9) BS03 BD9 2.5.1.60 GO:0003824 ... Q08603 19894725 PDBbind: -logKd/Ki=4.96, IC50=11uM
    14667 3hxg:A (2.1) BS02 GTA N/A GO:0003723 ... N/A 19710013 MOAD: Kd=0.27uM
    14668 3hxi:A (1.8) BS02 GTG N/A GO:0003723 ... N/A 19710013 PDBbind: -logKd/Ki=6.33, Kd=0.47uM
    14669 3hxo:A (2.4) BS01 dna ? N/A P04275 19913482 PDBbind: Kd=0.6nM
    14670 3hxq:A (2.694) BS01 dna ? N/A P04275 19913482 PDBbind: Kd=0.6nM
    14671 3hy5:A (3.04) BS01 RET ? GO:0005502 ... P12271 19846785 PDBbind: -logKd/Ki=7.70, Kd=20nM
    14672 3hy7:A (1.69) BS01 097 3.4.24.- GO:0004222 ... Q9UNA0 19586907 MOAD: ic50=106nM
    PDBbind: -logKd/Ki=6.97, IC50=106nM
    BindingDB: IC50=10000nM
    14673 3hy7:B (1.69) BS01 097 3.4.24.- GO:0004222 ... Q9UNA0 19586907 MOAD: ic50=106nM
    BindingDB: IC50=10000nM
    14674 3hy8:A (2.5) BS01 FMN 1.4.3.5 GO:0004733 ... Q9NVS9 19759001 MOAD: Kd=672nM
    14675 3hy9:A (2.02) BS05 098 3.4.24.- GO:0004222 ... Q9UNA0 19586907 MOAD: ic50=17nM
    PDBbind: -logKd/Ki=7.77, IC50=17nM
    BindingDB: IC50=12nM
    14676 3hy9:B (2.02) BS05 098 3.4.24.- GO:0004222 ... Q9UNA0 19586907 MOAD: ic50=17nM
    BindingDB: IC50=12nM
    14677 3hyf:A (1.7) BS03 ON1 3.1.26.13
    3.1.26.4    		 GO:0003676 ... P0A7Y4
    Q72547    		 19791799 MOAD: ic50=1.2uM
    PDBbind: -logKd/Ki=5.92, IC50=1.2uM
    14678 3hyg:A (1.4) BS05 099 3.4.24.- GO:0004222 ... Q9UNA0 19586907 MOAD: ic50=93nM
    PDBbind: -logKd/Ki=7.03, IC50=93nM
    14679 3hyg:B (1.4) BS05 099 3.4.24.- GO:0004222 ... Q9UNA0 19586907 MOAD: ic50=93nM
    14680 3hzf:A (2.5) BS01 B72 ? GO:0003677 ... P10827 18237438 BindingDB: Kd=0.44nM, Ki=1.09nM, EC50=45nM
    14681 3hzi:B (2.98) BS01 dna ? GO:0000976 ... P23873 19150849 PDBbind: Kd=15uM
    14682 3hzl:A (1.55) BS02 6PC ? GO:0000166 ... Q9X9P9 19702312 MOAD: Kd=3000uM
    14683 3hzy:A (2.1) BS01 KDA N/A N/A N/A 20000757 PDBbind: -logKd/Ki=7.00, Kd=0.1uM
    14684 3i06:A (1.1) BS01 QL2 3.4.22.51 GO:0006508 ... P25779 19908842 PDBbind: -logKd/Ki=9.70, IC50=0.2nM
    BindingDB: IC50=10nM
    14685 3i0r:A (2.98) BS01 RT3 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 19631528 PDBbind: -logKd/Ki=8.52, IC50=3nM
    14686 3i0s:A (2.7) BS01 RT7 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 19631528 PDBbind: -logKd/Ki=9.00, IC50=1nM
    14687 3i1y:A (2.469) BS01 33N 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 19746975 MOAD: ic50=7nM
    PDBbind: -logKd/Ki=8.15, IC50=7nM
    BindingDB: IC50=7nM
    14688 3i25:A (2.1) BS01 MV7 3.4.23.46 GO:0004190 ... P56817 20122837 MOAD: Ki=3.1nM
    PDBbind: -logKd/Ki=8.51, Ki=3.1nM
    BindingDB: Ki=3.1nM
    14689 3i25:B (2.1) BS01 MV7 3.4.23.46 GO:0004190 ... P56817 20122837 MOAD: Ki=3.1nM
    BindingDB: Ki=3.1nM
    14690 3i25:C (2.1) BS01 MV7 3.4.23.46 GO:0004190 ... P56817 20122837 MOAD: Ki=3.1nM
    BindingDB: Ki=3.1nM
    14691 3i28:A (1.95) BS01 34N 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 19746975 MOAD: ic50=6nM
    PDBbind: -logKd/Ki=8.22, IC50=6nM
    BindingDB: IC50=8nM, EC50=0.14nM
    14692 3i3b:A (2.2) BS01 149 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=5.9mM
    PDBbind: -logKd/Ki=2.23, Ki=5.9mM
    14693 3i3b:B (2.2) BS01 149 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=5.9mM
    14694 3i3b:C (2.2) BS01 149 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=5.9mM
    14695 3i3b:D (2.2) BS01 149 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=5.9mM
    PDBbind: -logKd/Ki=2.23, Ki=5.9mM
    14696 3i3d:A (2.2) BS01 IPT 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=10.3mM
    PDBbind: -logKd/Ki=1.99, Ki=10.3mM
    BindingDB: Ki=7.6e+4nM
    14697 3i3d:A (2.2) BS02 IPT 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=10.3mM
    PDBbind: -logKd/Ki=1.99, Ki=10.3mM
    BindingDB: Ki=7.6e+4nM
    14698 3i3d:B (2.2) BS01 IPT 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=10.3mM
    BindingDB: Ki=7.6e+4nM
    14699 3i3d:C (2.2) BS01 IPT 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=10.3mM
    BindingDB: Ki=7.6e+4nM
    14700 3i3d:D (2.2) BS01 IPT 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=10.3mM
    PDBbind: -logKd/Ki=1.99, Ki=10.3mM
    BindingDB: Ki=7.6e+4nM
    14701 3i3d:D (2.2) BS02 IPT 3.2.1.23 GO:0000287 ... P00722 20921997 MOAD: Ki=10.3mM
    PDBbind: -logKd/Ki=1.99, Ki=10.3mM
    BindingDB: Ki=7.6e+4nM
    14702 3i4a:A (1.898) BS01 LN5 3.5.3.18 GO:0000052 ... O94760 19663506 PDBbind: -logKd/Ki=4.28, Ki=52uM
    BindingDB: Ki=5.2e+4nM, IC50=300000nM
    14703 3i4a:B (1.898) BS01 LN5 3.5.3.18 GO:0000052 ... O94760 19663506 BindingDB: Ki=5.2e+4nM, IC50=300000nM
    14704 3i4b:A (2.3) BS01 Z48 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 19827834 MOAD: Ki=7nM
    PDBbind: -logKd/Ki=8.15, Ki=7nM
    BindingDB: Ki=7nM
    14705 3i4b:B (2.3) BS01 Z48 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 19827834 MOAD: Ki=7nM
    PDBbind: -logKd/Ki=8.15, Ki=7nM
    BindingDB: Ki=7nM
    14706 3i4v:A (2.0) BS02 3CE 1.13.11.1 GO:0003824 ... P95607 20040374 MOAD: Ki=0.7uM
    14707 3i4y:A (1.85) BS02 35C 1.13.11.1 GO:0003824 ... P95607 20040374 MOAD: Ki=0.09uM
    PDBbind: -logKd/Ki=7.05, Ki=0.09uM
    14708 3i51:A (1.8) BS02 45C 1.13.11.1 GO:0003824 ... P95607 20040374 MOAD: Ki=0.02uM
    PDBbind: -logKd/Ki=7.70, Ki=0.02uM
    14709 3i5n:A (2.0) BS01 B2D 2.7.10.1 GO:0004672 ... P08581 19819693 MOAD: ic50=17nM
    PDBbind: -logKd/Ki=7.85, IC50=14nM
    BindingDB: IC50=17nM
    14710 3i5x:A (1.9) BS01 rna 3.6.4.13 GO:0003676 ... P15424 19748356 PDBbind: Kd=2nM
    14711 3i5z:A (2.2) BS01 Z48 2.7.11.24 GO:0000165 ... P28482 19827834 MOAD: Ki=2nM
    PDBbind: -logKd/Ki=8.70, Ki=2nM
    BindingDB: Ki=4nM
    14712 3i60:A (2.5) BS01 E86 2.7.11.24 GO:0000165 ... P28482 19827834 MOAD: Ki<2nM
    PDBbind: -logKd/Ki=8.70, Ki=2nM
    BindingDB: Ki=<2nM
    14713 3i65:A (2.0) BS01 JZ8 1.3.5.2 GO:0004152 ... Q08210 19640844 MOAD: ic50=0.047uM
    14714 3i68:A (2.4) BS01 J4Z 1.3.5.2 GO:0004152 ... Q08210 19640844 MOAD: ic50=0.056uM
    BindingDB: IC50=56nM
    14715 3i6c:A (1.3) BS01 GIA 5.2.1.8 GO:0003755 ... Q13526 20207139 MOAD: Ki=12uM
    PDBbind: -logKd/Ki=4.92, Ki=12uM
    BindingDB: Ki=12000nM, IC50=12000nM
    14716 3i6c:A (1.3) BS02 GIA 5.2.1.8 GO:0003755 ... Q13526 20207139 MOAD: Ki=12uM
    PDBbind: -logKd/Ki=4.92, Ki=12uM
    BindingDB: Ki=12000nM, IC50=12000nM
    14717 3i6c:B (1.3) BS01 GIA 5.2.1.8 GO:0003755 ... Q13526 20207139 MOAD: Ki=12uM
    BindingDB: Ki=12000nM, IC50=12000nM
    14718 3i6m:A (2.26) BS01 G3X 3.1.1.7 GO:0001507 ... P04058 20025280 PDBbind: -logKd/Ki=6.46, IC50=0.35uM
    14719 3i6o:A (1.17) BS01 GR6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 19746963 PDBbind: -logKd/Ki=10.35, Ki=45pM
    14720 3i6o:B (1.17) BS01 GR6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 19746963 MOAD: Ki=45pM
    PDBbind: -logKd/Ki=10.35, Ki=45pM
    14721 3i6r:A (2.5) BS01 J5Z 1.3.5.2 GO:0004152 ... Q08210 19640844 MOAD: ic50=0.28uM
    BindingDB: IC50=280nM
    14722 3i6z:A (2.19) BS01 G6X 3.1.1.7 GO:0001507 ... P04058 20025280 PDBbind: -logKd/Ki=7.30, IC50=0.05uM
    14723 3i73:A (2.4) BS01 ADP 3.1.-.-
    7.1.2.2    		 GO:0005524 ... O57728 19944110 MOAD: Kd=3.23uM
    PDBbind: -logKd/Ki=5.49, Kd=3.23uM
    14724 3i7b:A (1.988) BS01 BK1 2.7.11.17 GO:0004672 ... Q9BJF5 20436472 MOAD: ic50=0.066uM
    PDBbind: -logKd/Ki=7.18, IC50=0.066uM
    BindingDB: IC50=128nM
    14725 3i7c:A (1.98) BS01 BK2 2.7.11.17 GO:0004672 ... Q9BJF5 20436472 MOAD: ic50=0.018uM
    PDBbind: -logKd/Ki=7.74, IC50=0.018uM
    BindingDB: IC50=15.0nM
    14726 3i7e:A (1.7) BS01 DJR 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 19746963 MOAD: Ki=14pM
    PDBbind: -logKd/Ki=10.85, Ki=14pM
    14727 3i7e:B (1.7) BS01 DJR 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 19746963 PDBbind: -logKd/Ki=10.85, Ki=14pM
    14728 3i7g:A (1.95) BS06 732 3.4.24.- GO:0004222 ... P45452 19692239 MOAD: ic50=430nM
    PDBbind: -logKd/Ki=6.37, IC50=430nM
    BindingDB: IC50=430nM
    14729 3i7i:A (2.208) BS06 518 3.4.24.- GO:0004222 ... P45452 19692239 MOAD: ic50=620nM
    PDBbind: -logKd/Ki=6.21, IC50=620nM
    BindingDB: IC50=620nM
    14730 3i7s:A (2.3) BS01 PYR 4.3.3.7 GO:0005737 ... P0A6L2 20353808 MOAD: Kd=0.0299mM
    14731 3i7s:B (2.3) BS01 PYR 4.3.3.7 GO:0005737 ... P0A6L2 20353808 MOAD: Kd=0.0299mM
    14732 3i7z:A (2.3) BS02 VO4 3.1.3.48 GO:0004725 ... P18031 20236928 BindingDB: IC50=2000nM
    14733 3i80:A (2.25) BS01 VO4 3.1.3.48 GO:0004725 ... P18031 20236928 BindingDB: IC50=2000nM
    14734 3i81:A (2.08) BS01 EBI 2.7.10.1 GO:0004672 ... P08069 19778024 MOAD: ic50=13nM
    PDBbind: -logKd/Ki=7.89, IC50=13nM
    BindingDB: IC50=2nM
    14735 3i8a:X (2.41) BS01 N22 1.5.1.3 GO:0004146 ... P0A017 20026215 MOAD: Ki=0.12uM
    14736 3i8p:A (1.9) BS01 840 2.3.1.179 GO:0004315 ... P0AAI5 19581087 MOAD: ic50=19nM
    14737 3i8v:A (2.25) BS02 0MO 3.1.4.53 GO:0004114 ... P27815 N/A BindingDB: IC50=4300nM, EC50=3300nM
    14738 3i8v:B (2.25) BS02 0MO 3.1.4.53 GO:0004114 ... P27815 N/A BindingDB: IC50=4300nM, EC50=3300nM
    14739 3i8w:A (1.7) BS01 CB5 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 19874035 MOAD: Ki=4.9nM
    14740 3i97:A (2.9) BS01 8DR ? N/A O14786 20151671 PDBbind: -logKd/Ki=5.52, IC50=3uM
    14741 3i9g:H (1.9) BS01 S1P N/A N/A N/A 19815502 PDBbind: -logKd/Ki=8.96, Kd=1.1nM
    14742 3i9g:L (1.9) BS03 S1P N/A N/A N/A 19815502 MOAD: Kd=1.1nM
    PDBbind: -logKd/Ki=8.96, Kd=1.1nM
    14743 3ia6:A (2.31) BS01 UNT ? GO:0003677 ... P37231 19783444 MOAD: ic50=0.003uM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3nM, EC50=13nM
    14744 3ia6:B (2.31) BS01 UNT ? GO:0003677 ... P37231 19783444 MOAD: ic50=0.003uM
    BindingDB: IC50=3nM, EC50=13nM
    14745 3iad:A (2.65) BS01 15X 3.1.4.53 GO:0004114 ... Q08499 20037581 PDBbind: -logKd/Ki=9.00, IC50=1nM
    14746 3iae:A (2.3) BS01 D7K 4.1.2.38 GO:0000287 ... Q9F4L3 20030408 PDBbind: -logKd/Ki=3.89, Ki=0.13mM
    14747 3iae:A (2.3) BS03 D7K 4.1.2.38 GO:0000287 ... Q9F4L3 20030408 PDBbind: -logKd/Ki=3.89, Ki=0.13mM
    14748 3iae:B (2.3) BS01 D7K 4.1.2.38 GO:0000287 ... Q9F4L3 20030408 PDBbind: -logKd/Ki=3.89, Ki=0.13mM
    14749 3iae:B (2.3) BS02 D7K 4.1.2.38 GO:0000287 ... Q9F4L3 20030408 PDBbind: -logKd/Ki=3.89, Ki=0.13mM
    14750 3iaf:A (2.8) BS01 TPP 4.1.2.38 GO:0000287 ... Q9F4L3 20030408 PDBbind: -logKd/Ki=2.92, Ki=1.2mM
    14751 3iaf:A (2.8) BS03 TPP 4.1.2.38 GO:0000287 ... Q9F4L3 20030408 PDBbind: -logKd/Ki=2.92, Ki=1.2mM
    14752 3iaf:B (2.8) BS01 TPP 4.1.2.38 GO:0000287 ... Q9F4L3 20030408 PDBbind: -logKd/Ki=2.92, Ki=1.2mM
    14753 3iaf:B (2.8) BS02 TPP 4.1.2.38 GO:0000287 ... Q9F4L3 20030408 PDBbind: -logKd/Ki=2.92, Ki=1.2mM
    14754 3iag:C (2.0) BS01 dna ? GO:0000978 ... P31266 19866488 PDBbind: Kd=333nM
    14755 3iag:C (2.0) BS02 dna ? GO:0000978 ... P31266 19866488 PDBbind: Kd=333nM
    14756 3iai:A (2.2) BS02 AZM 4.2.1.1 GO:0004089 ... Q16790 19805286 BindingDB: Ki=25nM, IC50=1520nM, Kd=20nM
    14757 3iai:B (2.2) BS02 AZM 4.2.1.1 GO:0004089 ... Q16790 19805286 BindingDB: Ki=25nM, IC50=1520nM, Kd=20nM
    14758 3iai:C (2.2) BS02 AZM 4.2.1.1 GO:0004089 ... Q16790 19805286 BindingDB: Ki=25nM, IC50=1520nM, Kd=20nM
    14759 3iai:D (2.2) BS02 AZM 4.2.1.1 GO:0004089 ... Q16790 19805286 BindingDB: Ki=25nM, IC50=1520nM, Kd=20nM
    14760 3iak:A (2.8) BS02 EV1 3.1.4.53 GO:0004114 ... Q08499 N/A BindingDB: IC50=1400nM
    14761 3iaw:A (1.61) BS01 2NC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 22158985 MOAD: Kd=1.57uM
    PDBbind: -logKd/Ki=5.80, Kd=1.57uM
    14762 3iaz:A (2.0) BS01 AIN 3.4.21.- GO:0005576 ... P24627 20006955 MOAD: Kd=330uM
    14763 3ib1:A (2.2) BS04 IMN 3.4.21.- GO:0005576 ... P24627 20006955 MOAD: Kd=260uM
    14764 3ib2:A (2.29) BS01 IBP 3.4.21.- GO:0005576 ... P24627 20006955 MOAD: Kd=480uM
    14765 3ibi:A (1.93) BS02 BOW 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19731956 MOAD: Ki=2.6nM
    PDBbind: -logKd/Ki=8.59, Ki=2.6nM
    BindingDB: Ki=2.6nM
    14766 3ibl:A (1.55) BS02 O59 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19731956 MOAD: Ki=14.6nM
    PDBbind: -logKd/Ki=7.84, Ki=14.6nM
    BindingDB: Ki=14.6nM
    14767 3ibn:A (2.2) BS02 O60 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19731956 MOAD: Ki=24.5nM
    PDBbind: -logKd/Ki=7.61, Ki=24.5nM
    BindingDB: Ki=24.5nM
    14768 3ibu:A (1.41) BS02 O48 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19731956 MOAD: Ki=0.7nM
    PDBbind: -logKd/Ki=9.15, Ki=0.7nM
    BindingDB: Ki=0.7nM
    14769 3id8:A (2.4) BS02 MRK 2.7.1.1 GO:0001678 ... P35557 22101819 BindingDB: EC50=67.11nM, Kd=360nM
    14770 3idp:A (2.7) BS01 L1E 2.7.11.1 GO:0004672 ... P15056 19764794 BindingDB: Ki=1nM, IC50=2nM
    14771 3idp:B (2.7) BS01 L1E 2.7.11.1 GO:0004672 ... P15056 19764794 PDBbind: -logKd/Ki=8.80, IC50=1.6nM
    BindingDB: Ki=1nM, IC50=2nM
    14772 3ie3:A (1.8) BS02 N11 2.5.1.18 GO:0000302 ... P09211 19808963 MOAD: Kd=0.21uM
    PDBbind: -logKd/Ki=6.68, Kd=0.21uM
    BindingDB: IC50=800nM
    14773 3ie3:B (1.8) BS02 N11 2.5.1.18 GO:0000302 ... P09211 19808963 MOAD: Kd=0.21uM
    BindingDB: IC50=800nM
    14774 3iej:A (2.18) BS01 599 3.4.22.27 GO:0006508 ... P25774 19773165 MOAD: ic50=0.22uM
    PDBbind: -logKd/Ki=6.66, IC50=0.22uM
    BindingDB: IC50=220nM
    14775 3iej:B (2.18) BS01 599 3.4.22.27 GO:0006508 ... P25774 19773165 MOAD: ic50=0.22uM
    BindingDB: IC50=220nM
    14776 3ieo:A (2.0) BS02 AMJ 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 20028100 MOAD: Ki=331nM
    PDBbind: -logKd/Ki=6.48, Ki=331nM
    14777 3ies:A (2.0) BS01 M24 1.13.12.7 GO:0001676 ... P08659 20194791 MOAD: Kd~120pM
    PDBbind: -logKd/Ki=9.92, Kd=120pM
    14778 3if7:A (1.6) BS05 SPU ? GO:0000922 ... P62157 20522785 MOAD: Kd=61nM
    PDBbind: -logKd/Ki=7.21, Kd=61nM
    14779 3if7:A (1.6) BS06 SPU ? GO:0000922 ... P62157 20522785 MOAD: Kd=61nM
    PDBbind: -logKd/Ki=7.21, Kd=61nM
    14780 3if7:A (1.6) BS07 SPU ? GO:0000922 ... P62157 20522785 MOAD: Kd=61nM
    PDBbind: -logKd/Ki=7.21, Kd=61nM
    14781 3if7:A (1.6) BS08 SPU ? GO:0000922 ... P62157 20522785 MOAD: Kd=61nM
    PDBbind: -logKd/Ki=7.21, Kd=61nM
    14782 3ig6:B (1.83) BS02 438 3.4.21.73 GO:0004252 ... P00749 19703768 MOAD: ic50=0.025uM
    PDBbind: -logKd/Ki=7.60, IC50=0.025uM
    BindingDB: IC50=25nM
    14783 3ig6:B (1.83) BS03 438 3.4.21.73 GO:0004252 ... P00749 19703768 MOAD: ic50=0.025uM
    PDBbind: -logKd/Ki=7.60, IC50=0.025uM
    BindingDB: IC50=25nM
    14784 3ig6:D (1.83) BS02 438 3.4.21.73 GO:0004252 ... P00749 19703768 MOAD: ic50=0.025uM
    BindingDB: IC50=25nM
    14785 3ig6:D (1.83) BS03 438 3.4.21.73 GO:0004252 ... P00749 19703768 MOAD: ic50=0.025uM
    BindingDB: IC50=25nM
    14786 3ig7:A (1.8) BS01 EFP 2.7.11.22 GO:0000082 ... P24941 19700321 MOAD: ic50=9nM
    PDBbind: -logKd/Ki=7.20, IC50=63nM
    14787 3igb:A (2.238) BS01 454 3.4.23.46 GO:0004190 ... P56817 19757823 MOAD: ic50=38uM
    PDBbind: -logKd/Ki=4.42, IC50=38uM
    BindingDB: IC50=38000nM, EC50=16000nM
    14788 3igg:A (1.8) BS01 EFQ 2.7.11.22 GO:0000082 ... P24941 19700321 MOAD: ic50=95nM
    PDBbind: -logKd/Ki=7.18, IC50=66.5nM
    14789 3igm:A (2.2) BS01 dna ? GO:0003700 ... Q8IKH2 19913037 PDBbind: Kd=0.5uM
    14790 3igm:A (2.2) BS02 dna ? GO:0003700 ... Q8IKH2 19913037 PDBbind: Kd=0.5uM
    14791 3igm:B (2.2) BS01 dna ? GO:0003700 ... Q8IKH2 19913037 PDBbind: Kd=0.5uM
    14792 3igm:B (2.2) BS02 dna ? GO:0003700 ... Q8IKH2 19913037 PDBbind: Kd=0.5uM
    14793 3igp:A (1.65) BS02 DT7 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 20170095 MOAD: Ki=32.8nM
    PDBbind: -logKd/Ki=7.02, Ki=94.5nM
    14794 3igp:A (1.65) BS03 DT7 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 20170095 MOAD: Ki=32.8nM
    PDBbind: -logKd/Ki=7.02, Ki=94.5nM
    14795 3igv:A (2.6) BS01 B80 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 19796938 PDBbind: -logKd/Ki=7.60, IC50=0.025uM
    14796 3ihz:A (1.67) BS01 FK5 5.2.1.8 GO:0003755 ... A5K8X6 20572013 MOAD: ic50=160nM
    PDBbind: -logKd/Ki=6.80, IC50=160nM
    14797 3ihz:B (1.67) BS01 FK5 5.2.1.8 GO:0003755 ... A5K8X6 20572013 PDBbind: -logKd/Ki=6.80, IC50=160nM
    14798 3ii4:A (2.42) BS02 3II 1.8.1.4 GO:0004148 ... P9WHH9 20078138 MOAD: Ki=865nM
    14799 3ii4:B (2.42) BS02 3II 1.8.1.4 GO:0004148 ... P9WHH9 20078138 MOAD: Ki=865nM
    14800 3ii5:A (2.79) BS01 831 2.7.11.1 GO:0004672 ... P15056 19864136 PDBbind: -logKd/Ki=7.62, IC50=0.024uM
    BindingDB: IC50=24nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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