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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    14401 3h52:C (2.8) BS01 486 ? N/A P04150 19913032 BindingDB: IC50=1.1nM, Ki=1.2nM, EC50=872nM, Kd=15nM
    14402 3h52:D (2.8) BS01 486 ? N/A P04150 19913032 BindingDB: IC50=1.1nM, Ki=1.2nM, EC50=872nM, Kd=15nM
    14403 3h59:A (2.1) BS01 H59 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 19700319 PDBbind: -logKd/Ki=7.89, IC50=0.013uM
    14404 3h5b:A (1.29) BS01 031 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 19473017 PDBbind: -logKd/Ki=10.00, Ki=0.099nM
    14405 3h5b:B (1.29) BS01 031 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 19473017 MOAD: Ki=0.099nM
    PDBbind: -logKd/Ki=10.00, Ki=0.099nM
    14406 3h5s:A (2.0) BS01 H5S 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 19709881 MOAD: ic50=0.005uM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    14407 3h5s:B (2.0) BS01 H5S 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 19709881 MOAD: ic50=0.005uM
    14408 3h5u:A (1.95) BS01 H5U 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 19709881 MOAD: ic50=0.003uM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    14409 3h5u:B (1.95) BS01 H5U 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 19709881 MOAD: ic50=0.003uM
    14410 3h6k:A (2.187) BS02 33T 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 19673466 MOAD: ic50=26nM
    BindingDB: IC50=10nM
    14411 3h6k:B (2.187) BS01 33T 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 19673466 MOAD: ic50=26nM
    BindingDB: IC50=10nM
    14412 3h6k:B (2.187) BS03 33T 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 19673466 MOAD: ic50=26nM
    BindingDB: IC50=10nM
    14413 3h6k:C (2.187) BS02 33T 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 19673466 MOAD: ic50=26nM
    BindingDB: IC50=10nM
    14414 3h6k:C (2.187) BS03 33T 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 19673466 MOAD: ic50=26nM
    BindingDB: IC50=10nM
    14415 3h6k:D (2.187) BS02 33T 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 19673466 MOAD: ic50=26nM
    BindingDB: IC50=10nM
    14416 3h6t:A (2.25) BS02 CYZ ? GO:0015276 ... P19491 19591837 BindingDB: EC50=7600nM
    14417 3h6t:A (2.25) BS04 CYZ ? GO:0015276 ... P19491 19591837 BindingDB: EC50=7600nM
    14418 3h6t:B (2.25) BS02 CYZ ? GO:0015276 ... P19491 19591837 BindingDB: EC50=7600nM
    14419 3h6t:C (2.25) BS01 CYZ ? GO:0015276 ... P19491 19591837 BindingDB: EC50=7600nM
    14420 3h6t:C (2.25) BS03 CYZ ? GO:0015276 ... P19491 19591837 BindingDB: EC50=7600nM
    14421 3h78:A (1.7) BS01 BE2 2.3.1.262 GO:0004315 ... P20582 19694421 PDBbind: -logKd/Ki=4.24, Kd=57uM
    14422 3h78:B (1.7) BS01 BE2 2.3.1.262 GO:0004315 ... P20582 19694421 PDBbind: -logKd/Ki=4.24, Kd=57uM
    14423 3h78:B (1.7) BS02 BE2 2.3.1.262 GO:0004315 ... P20582 19694421 PDBbind: -logKd/Ki=4.24, Kd=57uM
    14424 3h7r:A (1.4) BS01 NAP 1.1.1.- GO:0004033 ... O80944 19616008 MOAD: Kd=584nM
    14425 3h7u:A (1.25) BS01 NAP 1.1.1.- GO:0004033 ... Q0PGJ6 19616008 MOAD: Kd=163nM
    14426 3h7w:A (1.65) BS01 018 ? N/A Q99814 19950993 MOAD: Kd=0.59uM
    14427 3h82:A (1.5) BS01 020 ? N/A Q99814 19950993 MOAD: Kd=1.5uM
    14428 3h89:A (2.5) BS01 NSX 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.023uM
    PDBbind: -logKd/Ki=7.64, Ki=0.023uM
    14429 3h89:B (2.5) BS01 NSX 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.023uM
    14430 3h89:C (2.5) BS01 NSX 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.023uM
    14431 3h89:D (2.5) BS01 NSX 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.023uM
    14432 3h89:E (2.5) BS01 NSX 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.023uM
    14433 3h89:F (2.5) BS01 NSX 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.023uM
    14434 3h8b:A (1.8) BS01 NSY 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.511uM
    PDBbind: -logKd/Ki=6.29, Ki=0.511uM
    14435 3h8b:A (1.8) BS02 NSY 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.511uM
    PDBbind: -logKd/Ki=6.29, Ki=0.511uM
    14436 3h8b:B (1.8) BS01 NSY 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.511uM
    14437 3h8b:B (1.8) BS02 NSY 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.511uM
    14438 3h8b:C (1.8) BS01 NSY 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.511uM
    14439 3h8b:C (1.8) BS02 NSY 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.511uM
    14440 3h8b:D (1.8) BS01 NSY 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.511uM
    14441 3h8b:D (1.8) BS02 NSY 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.511uM
    14442 3h8b:E (1.8) BS01 NSY 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.511uM
    14443 3h8b:E (1.8) BS02 NSY 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.511uM
    14444 3h8b:F (1.8) BS01 NSY 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.511uM
    14445 3h8b:F (1.8) BS02 NSY 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.511uM
    14446 3h8c:A (2.5) BS01 NSZ 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.019uM
    PDBbind: -logKd/Ki=7.72, Ki=0.019uM
    14447 3h8c:B (2.5) BS01 NSZ 3.4.22.15 GO:0006508 ... P07711 19761244 MOAD: Ki=0.019uM
    14448 3h98:A (1.9) BS01 B5P 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 19500983 MOAD: ic50<0.005uM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    14449 3h98:B (1.9) BS01 B5P 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 19500983 MOAD: ic50<0.005uM
    14450 3h9f:A (2.6) BS02 92M 2.7.12.1 GO:0004672 ... P33981 20383151 PDBbind: -logKd/Ki=7.92, Kd=12nM
    BindingDB: IC50=342.2nM
    14451 3h9k:A (2.65) BS01 UFP 2.1.1.45 GO:0000900 ... P04818 21206062 PDBbind: -logKd/Ki=7.85, Ki=14nM
    BindingDB: Ki=14nM
    14452 3h9k:A (2.65) BS02 UFP 2.1.1.45 GO:0000900 ... P04818 21206062 PDBbind: -logKd/Ki=7.85, Ki=14nM
    BindingDB: Ki=14nM
    14453 3h9k:B (2.65) BS01 UFP 2.1.1.45 GO:0000900 ... P04818 21206062 PDBbind: -logKd/Ki=7.85, Ki=14nM
    BindingDB: Ki=14nM
    14454 3h9k:B (2.65) BS02 UFP 2.1.1.45 GO:0000900 ... P04818 21206062 PDBbind: -logKd/Ki=7.85, Ki=14nM
    BindingDB: Ki=14nM
    14455 3h9k:D (2.65) BS01 UFP 2.1.1.45 GO:0000900 ... P04818 21206062 BindingDB: Ki=14nM
    14456 3h9k:E (2.65) BS01 UFP 2.1.1.45 GO:0000900 ... P04818 21206062 BindingDB: Ki=14nM
    14457 3h9o:A (2.3) BS01 9BD 2.7.11.1 GO:0004672 ... O15530 19628388 MOAD: ic50=70nM
    PDBbind: -logKd/Ki=7.15, IC50=70nM
    14458 3h9r:A (2.35) BS01 TAK 2.7.11.30 GO:0004672 ... Q04771 22977237 BindingDB: IC50=148.1nM
    14459 3ha6:A (2.36) BS01 2JZ 2.7.11.1 GO:0000212 ... O14965 19648931 MOAD: ic50=2.1uM
    PDBbind: -logKd/Ki=5.68, IC50=2.1uM
    14460 3ha8:A (2.48) BS01 5JZ 2.7.11.24 GO:0000077 ... Q16539 19648931 BindingDB: EC50=<8nM
    14461 3hab:A (2.1) BS01 677 3.4.14.5 GO:0001618 ... P27487 19539471 MOAD: ic50=0.0042uM
    PDBbind: -logKd/Ki=8.38, IC50=4.2nM
    BindingDB: IC50=42nM
    14462 3hab:B (2.1) BS01 677 3.4.14.5 GO:0001618 ... P27487 19539471 MOAD: ic50=0.0042uM
    BindingDB: IC50=42nM
    14463 3hac:A (2.0) BS01 361 3.4.14.5 GO:0001618 ... P27487 19539471 MOAD: ic50=0.0083uM
    PDBbind: -logKd/Ki=8.17, IC50=6.7nM
    BindingDB: EC50=112nM, IC50=67nM
    14464 3hac:B (2.0) BS01 361 3.4.14.5 GO:0001618 ... P27487 19539471 MOAD: ic50=0.0083uM
    BindingDB: EC50=112nM, IC50=67nM
    14465 3had:A (2.0) BS01 NAD 1.1.1.35 GO:0003857 ... Q16836 10231530 MOAD: Kd=85.5uM
    14466 3had:B (2.0) BS01 NAD 1.1.1.35 GO:0003857 ... Q16836 10231530 MOAD: Kd=85.5uM
    14467 3hau:A (1.3) BS01 2NC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 22158985 MOAD: Kd=0.42uM
    PDBbind: -logKd/Ki=6.38, Kd=0.42uM
    14468 3hav:A (2.45) BS02 SRY ? GO:0005524 ... Q9EVD7 19429619 PDBbind: -logKd/Ki=3.77, Ki=170uM
    14469 3haw:B (1.3) BS01 2NC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 22158985 MOAD: Kd=1.01uM
    PDBbind: -logKd/Ki=6.00, Kd=1.01uM
    14470 3hb4:X (2.21) BS01 E2B 1.1.1.51
    1.1.1.62    		 GO:0003824 ... P14061 19929851 PDBbind: -logKd/Ki=9.05, Ki=0.9nM
    BindingDB: IC50=27nM
    14471 3hb5:X (2.0) BS02 E2B 1.1.1.51
    1.1.1.62    		 GO:0003824 ... P14061 19929851 MOAD: Ki=0.9nM
    BindingDB: IC50=27nM
    14472 3hb8:A (2.74) BS01 UMP 2.1.1.45 GO:0000900 ... P04818 21206062 PDBbind: -logKd/Ki=5.12, Kd=7.5uM
    14473 3hb8:B (2.74) BS01 UMP 2.1.1.45 GO:0000900 ... P04818 21206062 PDBbind: -logKd/Ki=5.12, Kd=7.5uM
    14474 3hbo:A (1.71) BS01 2NC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 22158985 MOAD: Kd=8.2uM
    PDBbind: -logKd/Ki=5.09, Kd=8.2uM
    14475 3hc5:A (2.6) BS02 82X ? GO:0004879 ... Q96RI1 19586769 BindingDB: EC50=63nM
    14476 3hc6:A (3.2) BS02 088 ? GO:0003677 ... Q96RI1 19586769 BindingDB: EC50=210nM
    14477 3hc8:A (1.79) BS01 PD4 3.1.4.35
    3.1.4.53    		 GO:0004114 ... O76074
    P27815    		 19539468 MOAD: ic50=2.9nM
    PDBbind: -logKd/Ki=8.54, IC50=2.9nM
    14478 3hcc:A (2.3) BS01 LT3 2.1.1.28 GO:0004603 ... P11086 19570037 MOAD: Ki=13uM
    BindingDB: Ki=13000nM
    14479 3hcc:B (2.3) BS01 LT3 2.1.1.28 GO:0004603 ... P11086 19570037 MOAD: Ki=13uM
    BindingDB: Ki=13000nM
    14480 3hcf:A (2.702) BS01 LT5 2.1.1.28 GO:0004603 ... P11086 19570037 BindingDB: Kd=2400nM
    14481 3hcf:B (2.702) BS01 LT5 2.1.1.28 GO:0004603 ... P11086 19570037 BindingDB: Kd=2400nM
    14482 3hcm:A (2.0) BS03 S45 ? GO:0001726 ... P04271 20077460 PDBbind: -logKd/Ki=3.30, Kd=0.5mM
    14483 3hcm:B (2.0) BS03 S45 ? GO:0001726 ... P04271 20077460 PDBbind: -logKd/Ki=3.30, Kd=0.5mM
    14484 3hd3:A (1.75) BS01 25B 3.4.22.51 GO:0006508 ... P25779 19773167 PDBbind: -logKd/Ki=7.00, IC50=0.1uM
    14485 3hdk:B (1.8) BS01 2NC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 22158985 MOAD: Kd=17.5uM
    PDBbind: -logKd/Ki=4.76, Kd=17.5uM
    14486 3hdm:A (2.6) BS01 MMG 2.7.11.1 GO:0004672 ... O00141 19497745 PDBbind: -logKd/Ki=7.40, IC50=40nM
    BindingDB: IC50=1300nM
    14487 3hdn:A (3.1) BS01 GMG 2.7.11.1 GO:0004672 ... O00141 19497745 PDBbind: -logKd/Ki=7.20, IC50=63nM
    BindingDB: IC50=880nM
    14488 3hdq:A (2.36) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=220uM
    14489 3hdq:B (2.36) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=220uM
    14490 3hdq:C (2.36) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=220uM
    14491 3hdq:D (2.36) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=220uM
    14492 3hdq:E (2.36) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=220uM
    14493 3hdq:F (2.36) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=220uM
    14494 3hdq:G (2.36) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=220uM
    14495 3hdq:H (2.36) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=220uM
    14496 3hdq:I (2.36) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=220uM
    14497 3hdq:J (2.36) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=220uM
    14498 3hdy:A (2.4) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=66uM
    14499 3hdy:B (2.4) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=66uM
    14500 3hdy:C (2.4) BS02 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=66uM
    14501 3hdy:D (2.4) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=66uM
    14502 3hdy:E (2.4) BS02 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=66uM
    14503 3hdy:F (2.4) BS02 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=66uM
    14504 3hdy:G (2.4) BS01 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=66uM
    14505 3hdy:H (2.4) BS02 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=66uM
    14506 3hdy:I (2.4) BS02 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=66uM
    14507 3hdy:J (2.4) BS02 GDU 5.4.99.9 GO:0000166 ... Q9RYF1 19836401 MOAD: Kd=66uM
    14508 3hdz:A (1.8) BS01 PD6 3.1.4.35
    3.1.4.53    		 GO:0004114 ... O76074
    P27815    		 19540112 MOAD: ic50=51nM
    PDBbind: -logKd/Ki=7.29, IC50=51nM
    14509 3hec:A (2.5) BS01 STI 2.7.11.24 GO:0000077 ... Q16539 20337484 MOAD: Kd=34uM
    PDBbind: -logKd/Ki=4.47, Kd=34.0uM
    BindingDB: Kd=>10000nM, IC50=100000nM
    14510 3heg:A (2.2) BS01 BAX 2.7.11.24 GO:0000077 ... Q16539 20337484 MOAD: Kd=0.18uM
    PDBbind: -logKd/Ki=6.74, Kd=0.18uM
    BindingDB: Kd=370nM, IC50=400nM
    14511 3hek:A (1.95) BS01 BD0 3.6.4.10 GO:0005524 ... P07900 19583220 MOAD: Ki=5.4nM
    PDBbind: -logKd/Ki=8.27, Ki=5.4nM
    14512 3hek:B (1.95) BS01 BD0 3.6.4.10 GO:0005524 ... P07900 19583220 MOAD: Ki=5.4nM
    14513 3hf6:A (1.8) BS02 LX0 1.14.16.4 GO:0004497 ... P17752 19631532 MOAD: ic50=0.026uM
    PDBbind: -logKd/Ki=7.59, IC50=0.026uM
    BindingDB: IC50=26nM
    14514 3hf8:A (1.85) BS02 ML0 1.14.16.4 GO:0004497 ... P17752 20556201 MOAD: Ki=0.31uM
    PDBbind: -logKd/Ki=6.51, Ki=0.31uM
    14515 3hfb:A (1.92) BS02 ML4 1.14.16.4 GO:0004497 ... P17752 20556201 MOAD: Ki=0.03uM
    PDBbind: -logKd/Ki=7.52, Ki=0.03uM
    BindingDB: IC50=40nM
    14516 3hfg:A (2.3) BS01 17R 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 19673466 MOAD: ic50=10nM
    BindingDB: IC50=26nM
    14517 3hfg:B (2.3) BS01 17R 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 19673466 MOAD: ic50=10nM
    BindingDB: IC50=26nM
    14518 3hfg:C (2.3) BS01 17R 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 19673466 MOAD: ic50=10nM
    BindingDB: IC50=26nM
    14519 3hfg:D (2.3) BS01 17R 1.1.1.146
    1.1.1.201    		 GO:0005496 ... P28845 19673466 MOAD: ic50=10nM
    BindingDB: IC50=26nM
    14520 3hfj:A (2.02) BS01 DZ9 N/A GO:0003824 ... N/A 19716475 MOAD: ic50=36uM
    PDBbind: -logKd/Ki=4.44, IC50=36uM
    14521 3hfj:B (2.02) BS01 DZ9 N/A GO:0003824 ... N/A 19716475 PDBbind: -logKd/Ki=4.44, IC50=36uM
    14522 3hfv:A (2.6) BS01 MTY 6.1.1.20 GO:0000049 ... O95363 19549855 PDBbind: -logKd/Ki=4.87, Ki=13.6uM
    14523 3hfz:A (2.9) BS01 MTY 6.1.1.20 GO:0000049 ... Q5SGX2 19549855 PDBbind: -logKd/Ki=4.89, Ki=13uM
    14524 3hgm:A (1.9) BS01 ATP ? GO:0005524 ... E1VBK4 20113006 MOAD: Kd=0.8uM
    14525 3hgm:B (1.9) BS01 ATP ? GO:0005524 ... E1VBK4 20113006 MOAD: Kd=0.8uM
    14526 3hgm:C (1.9) BS01 ATP ? GO:0005524 ... E1VBK4 20113006 MOAD: Kd=0.8uM
    14527 3hgm:D (1.9) BS01 ATP ? GO:0005524 ... E1VBK4 20113006 MOAD: Kd=0.8uM
    14528 3hha:A (1.27) BS01 NOW 3.4.22.15 GO:0006508 ... P07711 19515558 PDBbind: -logKd/Ki=7.90, IC50=12.6nM
    14529 3hhk:A (1.7) BS01 77Z 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... Q99AU2 19515564 MOAD: ic50=6nM
    PDBbind: -logKd/Ki=8.22, IC50=6nM
    14530 3hhk:B (1.7) BS01 77Z 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... Q99AU2 19515564 MOAD: ic50=6nM
    14531 3hhm:A (2.8) BS01 KWT 2.7.11.1
    2.7.1.137
    2.7.1.153    		 GO:0001525 ... P42336 19805105 PDBbind: -logKd/Ki=7.92, IC50=11.9nM
    BindingDB: IC50=12nM, Kd=5.4nM, Ki=120nM
    14532 3hhu:A (1.59) BS01 819 3.6.4.10 GO:0005524 ... P07900 19519743 MOAD: ic50=41nM
    PDBbind: -logKd/Ki=7.39, IC50=41nM
    14533 3hhu:B (1.59) BS01 819 3.6.4.10 GO:0005524 ... P07900 19519743 MOAD: ic50=41nM
    14534 3hhx:A (2.0) BS02 PYG 1.13.11.1 GO:0003824 ... P95607 20040374 MOAD: Ki=4.5uM
    14535 3hhy:A (1.55) BS02 CAQ 1.13.11.1 GO:0003824 ... P95607 20040374 MOAD: Ki=3uM
    14536 3hhy:A (1.55) BS03 CAQ 1.13.11.1 GO:0003824 ... P95607 20040374 MOAD: Ki=3uM
    14537 3hig:A (2.09) BS04 BRN 1.4.3.22 GO:0005507 ... P19801 19764817 MOAD: Ki=13nM
    PDBbind: -logKd/Ki=7.89, Ki=13nM
    BindingDB: Ki=13nM
    14538 3hig:B (2.09) BS04 BRN 1.4.3.22 GO:0005507 ... P19801 19764817 MOAD: Ki=13nM
    PDBbind: -logKd/Ki=7.89, Ki=13nM
    BindingDB: Ki=13nM
    14539 3hii:A (2.149) BS04 PNT 1.4.3.22 GO:0005507 ... P19801 19764817 MOAD: Ki=290nM
    PDBbind: -logKd/Ki=6.54, Ki=290nM
    BindingDB: Ki=290nM
    14540 3hii:B (2.149) BS04 PNT 1.4.3.22 GO:0005507 ... P19801 19764817 MOAD: Ki=290nM
    PDBbind: -logKd/Ki=6.54, Ki=290nM
    BindingDB: Ki=290nM
    14541 3hio:A (2.0) BS01 C2X 3.2.2.22 GO:0017148 ... P02879 19920175 PDBbind: -logKd/Ki=6.52, Ki=300nM
    14542 3hit:A (2.29) BS01 DYN 3.2.2.22 GO:0006952 ... Q2QEH4 19920175 MOAD: Ki=6.4nM
    PDBbind: -logKd/Ki=8.19, Ki=6.4nM
    14543 3hit:B (2.29) BS01 DYN 3.2.2.22 GO:0006952 ... Q2QEH4 19920175 MOAD: Ki=6.4nM
    14544 3hiv:A (2.14) BS01 TXN 3.2.2.22 GO:0006952 ... Q2QEH4 19920175 MOAD: Ki=7.5nM
    PDBbind: -logKd/Ki=8.12, Ki=7.5nM
    14545 3hiv:B (2.14) BS01 TXN 3.2.2.22 GO:0006952 ... Q2QEH4 19920175 MOAD: Ki=7.5nM
    14546 3hiw:A (1.8) BS01 C2X 3.2.2.22 GO:0006952 ... Q2QEH4 19920175 MOAD: Ki=3.9nM
    PDBbind: -logKd/Ki=8.06, Ki=8.7nM
    14547 3hiw:B (1.8) BS01 C2X 3.2.2.22 GO:0006952 ... Q2QEH4 19920175 MOAD: Ki=3.9nM
    14548 3hiw:B (1.8) BS02 C2X 3.2.2.22 GO:0006952 ... Q2QEH4 19920175 MOAD: Ki=3.9nM
    14549 3hj0:A (1.34) BS01 A93 ? GO:0005179 ... P02766 20081815 PDBbind: -logKd/Ki=5.71, IC50=1.96uM
    BindingDB: IC50=1960nM
    14550 3hj0:B (1.34) BS01 A93 ? GO:0005179 ... P02766 20081815 PDBbind: -logKd/Ki=5.71, IC50=1.96uM
    BindingDB: IC50=1960nM
    14551 3hj8:A (2.4) BS02 4CL 1.13.11.1 GO:0003824 ... P95607 20040374 MOAD: Ki=1.5uM
    14552 3hjo:A (1.95) BS02 EAA 2.5.1.18 GO:0000302 ... P09211 19780048 PDBbind: -logKd/Ki=6.52, Kd=0.3uM
    BindingDB: IC50=2.6e+4nM
    14553 3hjo:B (1.95) BS02 EAA 2.5.1.18 GO:0000302 ... P09211 19780048 BindingDB: IC50=2.6e+4nM
    14554 3hjq:A (2.0) BS02 MBD 1.13.11.1 GO:0003824 ... P95607 20040374 MOAD: Ki=6.5uM
    14555 3hjs:A (1.8) BS02 MCT 1.13.11.1 GO:0003824 ... P95607 20040374 MOAD: Ki=4uM
    14556 3hjw:A (2.35) BS01 rna 5.4.99.25 GO:0000495 ... Q7LWY0 19478803 PDBbind: Kd=43nM
    14557 3hjw:A (2.35) BS02 rna 5.4.99.25 GO:0000495 ... Q7LWY0 19478803 PDBbind: Kd=43nM
    14558 3hjw:B (2.35) BS01 rna ? GO:0001522 ... Q8U1R4 19478803 PDBbind: Kd=43nM
    14559 3hjw:C (2.35) BS01 rna ? GO:0001682 ... Q8U160 19478803 PDBbind: Kd=43nM
    14560 3hk1:A (1.7) BS01 B64 ? GO:0005324 ... P04117 19754198 MOAD: Ki=0.67uM
    PDBbind: -logKd/Ki=6.17, Ki=0.67uM
    14561 3hkq:A (1.7) BS02 1SD 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19827837 PDBbind: -logKd/Ki=5.34, Ki=4.55uM
    BindingDB: Ki=4550nM
    14562 3hku:A (1.8) BS02 TOR 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19827837 PDBbind: -logKd/Ki=8.30, Ki=5nM
    BindingDB: Ki=10nM, Kd=290nM, IC50=5nM
    14563 3hkw:A (1.55) BS01 IX6 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26664 20071590 MOAD: Kd=80nM
    PDBbind: -logKd/Ki=8.64, Kd=2.3nM
    14564 3hkw:B (1.55) BS01 IX6 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26664 20071590 MOAD: Kd=80nM
    14565 3hkw:C (1.55) BS01 IX6 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26664 20071590 MOAD: Kd=80nM
    14566 3hky:A (1.9) BS01 IX6 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 20071590 MOAD: Kd=2.3nM
    PDBbind: -logKd/Ki=7.10, Kd=80nM
    14567 3hky:B (1.9) BS01 IX6 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 20071590 MOAD: Kd=2.3nM
    14568 3hl5:A (1.8) BS02 9JZ 2.3.2.27 N/A P98170 19492850 PDBbind: -logKd/Ki=4.47, Ki=34uM
    BindingDB: Kd=16nM
    14569 3hl5:A (1.8) BS03 9JZ 2.3.2.27 N/A P98170 19492850 PDBbind: -logKd/Ki=4.47, Ki=34uM
    BindingDB: Kd=16nM
    14570 3hl5:B (1.8) BS02 9JZ 2.3.2.27 N/A P98170 19492850 BindingDB: Kd=16nM
    14571 3hl7:A (1.88) BS01 I47 2.7.11.24 GO:0000077 ... Q16539 19496616 MOAD: Ki=0.023uM
    PDBbind: -logKd/Ki=7.64, Ki=23nM
    14572 3hl8:A (1.55) BS01 BBP 3.1.11.1 GO:0000175 ... P04995 20018747 MOAD: Ki=32uM
    PDBbind: -logKd/Ki=4.49, Ki=32uM
    14573 3hll:A (1.95) BS01 I45 2.7.11.24 GO:0000077 ... Q16539 19496616 MOAD: Ki=0.0058uM
    PDBbind: -logKd/Ki=8.24, Ki=5.8nM
    BindingDB: IC50=247nM, Kd=2.8nM, Ki=2.9nM
    14574 3hlo:A (1.6) BS01 2NC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 22158985 MOAD: Kd=0.61uM
    PDBbind: -logKd/Ki=6.21, Kd=0.61uM
    14575 3hm1:A (2.33) BS02 J3Z ? N/A P03372 N/A BindingDB: EC50=166nM, IC50=210nM
    14576 3hm1:B (2.33) BS02 J3Z ? N/A P03372 N/A BindingDB: EC50=166nM, IC50=210nM
    14577 3hmm:A (1.7) BS01 855 2.7.11.30 GO:0004672 ... P36897 19285388 MOAD: ic50=0.025uM
    PDBbind: -logKd/Ki=7.60, IC50=0.025uM
    BindingDB: IC50=25nM
    14578 3hmo:A (2.4) BS01 STU 2.7.12.1 GO:0004672 ... P33981 20099905 MOAD: Kd=30.5nM
    PDBbind: -logKd/Ki=7.52, Kd=30.5nM
    14579 3hmp:A (2.3) BS01 CX4 2.7.12.1 GO:0004672 ... P33981 20099905 MOAD: Kd=3.24uM
    PDBbind: -logKd/Ki=5.49, Kd=3.24uM
    14580 3hmv:A (2.23) BS02 HBT 3.1.4.53 GO:0004114 ... Q07343 19525117 PDBbind: -logKd/Ki=7.30, IC50=50.12nM
    BindingDB: IC50=50nM
    14581 3hmv:B (2.23) BS02 HBT 3.1.4.53 GO:0004114 ... Q07343 19525117 BindingDB: IC50=50nM
    14582 3hnb:M (1.15) BS01 768 ? N/A P00451 20089867 PDBbind: -logKd/Ki=5.11, IC50=7.8uM
    BindingDB: IC50=7800nM
    14583 3hng:A (2.7) BS01 8ST 2.7.10.1 GO:0004672 ... P17948 N/A PDBbind: -logKd/Ki=6.74, IC50=0.18uM
    BindingDB: IC50=180nM
    14584 3hnz:A (2.75) BS01 PMN 2.3.1.179 GO:0004315 ... P0AAI5 19581087 PDBbind: -logKd/Ki=7.72, IC50=19nM
    14585 3ho0:A (2.6) BS01 DKD ? GO:0003677 ... P37231 19775169 BindingDB: EC50=400nM
    14586 3ho2:A (2.0) BS01 N32 2.3.1.179 GO:0004315 ... P0AAI5 19581087 MOAD: ic50=113nM
    PDBbind: -logKd/Ki=6.95, IC50=113nM
    14587 3ho9:A (1.9) BS01 N3A 2.3.1.179 GO:0004315 ... P0AAI5 19581087 MOAD: ic50=789nM
    PDBbind: -logKd/Ki=6.10, IC50=789nM
    14588 3hod:A (2.1) BS01 ZZH ? GO:0003677 ... P37231 19775169 BindingDB: EC50=572nM
    14589 3hok:B (2.19) BS02 Q80 1.14.14.18 GO:0004392 ... P09601 19601578 MOAD: ic50=2.1uM
    14590 3hp2:A (2.15) BS01 P36 2.7.11.24 GO:0000077 ... Q16539 19751974 PDBbind: -logKd/Ki=6.17, IC50=0.68uM
    BindingDB: IC50=680nM
    14591 3hp5:A (2.3) BS01 52P 2.7.11.24 GO:0000077 ... Q16539 19751974 PDBbind: -logKd/Ki=7.15, IC50=0.07uM
    BindingDB: Kd=2.8nM, IC50=70nM, Ki=0.800000nM
    14592 3hp9:A (1.6) BS01 CF1 3.1.11.1 GO:0000175 ... P04995 20018747 MOAD: Ki=26uM
    PDBbind: -logKd/Ki=4.59, Ki=26uM
    14593 3hpt:B (2.19) BS01 YET 3.4.21.6 GO:0004252 ... P00742 19541481 MOAD: Ki=6.5nM
    PDBbind: -logKd/Ki=8.19, Ki=6.5nM
    BindingDB: IC50=12nM, Ki=6.5nM
    14594 3hpt:D (2.19) BS01 YET 3.4.21.6 GO:0004252 ... P00742 19541481 MOAD: Ki=6.5nM
    BindingDB: IC50=12nM, Ki=6.5nM
    14595 3hq5:A (2.1) BS01 GKK ? N/A P06401 19595590 MOAD: ic50=16nM
    PDBbind: -logKd/Ki=7.80, IC50=16nM
    BindingDB: IC50=16nM, EC50=9nM
    14596 3hq5:B (2.1) BS01 GKK ? N/A P06401 19595590 MOAD: ic50=16nM
    BindingDB: IC50=16nM, EC50=9nM
    14597 3hqu:A (2.3) BS03 UN9 1.14.11.29 GO:0005506 ... Q9GZT9 19604478 BindingDB: IC50=300nM, EC50=79000nM, Kd=80nM
    14598 3hqw:A (1.7) BS02 PF4 3.1.4.17 GO:0004114 ... Q9QYJ6 19630403 MOAD: ic50=35nM
    PDBbind: -logKd/Ki=7.46, IC50=35nM
    BindingDB: IC50=35nM
    14599 3hqy:A (2.0) BS02 PF6 3.1.4.17 GO:0004114 ... Q9QYJ6 19630403 MOAD: ic50=11.5nM
    PDBbind: -logKd/Ki=7.94, IC50=11.5nM
    BindingDB: IC50=11.5nM
    14600 3hqz:A (1.7) BS02 PF8 3.1.4.17 GO:0004114 ... Q9QYJ6 19630403 MOAD: ic50=0.42nM
    PDBbind: -logKd/Ki=9.38, IC50=0.42nM
    BindingDB: IC50=0.42nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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