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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    14201 3gpj:I (2.7) BS01 SY2 3.4.25.1 GO:0000502 ... P25451 19359491 PDBbind: -logKd/Ki=5.11, Ki=7.8uM
    14202 3gpo:A (1.9) BS01 APR 2.1.1.-
    2.7.7.-
    2.7.7.19
    2.7.7.48
    3.1.3.84
    3.4.22.-
    3.6.1.15
    3.6.1.74
    3.6.4.13    		 N/A Q8JUX6 19386706 MOAD: Kd=5uM
    PDBbind: -logKd/Ki=5.30, Kd=5uM
    14203 3gpo:B (1.9) BS01 APR 2.1.1.-
    2.7.7.-
    2.7.7.19
    2.7.7.48
    3.1.3.84
    3.4.22.-
    3.6.1.15
    3.6.1.74
    3.6.4.13    		 N/A Q8JUX6 19386706 MOAD: Kd=5uM
    14204 3gpo:C (1.9) BS01 APR 2.1.1.-
    2.7.7.-
    2.7.7.19
    2.7.7.48
    3.1.3.84
    3.4.22.-
    3.6.1.15
    3.6.1.74
    3.6.4.13    		 N/A Q8JUX6 19386706 MOAD: Kd=5uM
    14205 3gpo:D (1.9) BS01 APR 2.1.1.-
    2.7.7.-
    2.7.7.19
    2.7.7.48
    3.1.3.84
    3.4.22.-
    3.6.1.15
    3.6.1.74
    3.6.4.13    		 N/A Q8JUX6 19386706 MOAD: Kd=5uM
    14206 3gqo:A (2.6) BS01 APR 2.1.1.-
    2.7.7.-
    2.7.7.19
    2.7.7.48
    3.1.3.84
    3.4.22.-
    3.6.1.15
    3.6.1.74
    3.6.4.13    		 N/A P36328 19386706 PDBbind: -logKd/Ki=5.41, Kd=3.9uM
    14207 3gqz:A (1.8) BS01 GF7 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=6.7mM
    PDBbind: -logKd/Ki=2.17, Ki=6.7mM
    14208 3gr2:A (1.8) BS01 GF4 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=3mM
    PDBbind: -logKd/Ki=2.52, Ki=3mM
    14209 3gr6:A (2.28) BS01 NAP 1.3.1.39 GO:0000166 ... Q6GI75 19768684 MOAD: Kd=18.6uM
    14210 3gr6:A (2.28) BS02 TCL 1.3.1.39 GO:0000166 ... Q6GI75 19768684 MOAD: Kd=2.92nM
    BindingDB: IC50=70nM, Ki=0.05nM
    14211 3gr6:D (2.28) BS01 NAP 1.3.1.39 GO:0000166 ... Q6GI75 19768684 MOAD: Kd=18.6uM
    14212 3gr6:D (2.28) BS02 TCL 1.3.1.39 GO:0000166 ... Q6GI75 19768684 MOAD: Kd=2.92nM
    BindingDB: IC50=70nM, Ki=0.05nM
    14213 3gr6:G (2.28) BS01 NAP 1.3.1.39 GO:0000166 ... Q6GI75 19768684 MOAD: Kd=18.6uM
    14214 3gr6:G (2.28) BS02 TCL 1.3.1.39 GO:0000166 ... Q6GI75 19768684 MOAD: Kd=2.92nM
    BindingDB: IC50=70nM, Ki=0.05nM
    14215 3gr6:J (2.28) BS01 NAP 1.3.1.39 GO:0000166 ... Q6GI75 19768684 MOAD: Kd=18.6uM
    14216 3gr6:J (2.28) BS02 TCL 1.3.1.39 GO:0000166 ... Q6GI75 19768684 MOAD: Kd=2.92nM
    BindingDB: IC50=70nM, Ki=0.05nM
    14217 3grj:A (2.49) BS01 G14 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=1mM
    PDBbind: -logKd/Ki=3.00, Ki=1mM
    14218 3grj:B (2.49) BS01 G14 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=1mM
    14219 3gs6:A (2.3) BS01 NP6 3.2.1.52 GO:0004553 ... Q9KU37 19499593 PDBbind: -logKd/Ki=6.59, Ki=0.26uM
    14220 3gs7:A (1.8) BS01 8BD ? GO:0005179 ... P02766 19621084 PDBbind: -logKd/Ki=5.44, IC50=3.6uM
    14221 3gs7:B (1.8) BS01 8BD ? GO:0005179 ... P02766 19621084 PDBbind: -logKd/Ki=5.44, IC50=3.6uM
    14222 3gsg:A (2.1) BS01 GF1 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=2mM
    PDBbind: -logKd/Ki=2.70, Ki=2mM
    14223 3gsg:B (2.1) BS01 GF1 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=2mM
    14224 3gsm:A (2.4) BS01 VPU 3.2.1.52 GO:0004553 ... Q9KU37 19499593 PDBbind: -logKd/Ki=6.48, Ki=0.33uM
    14225 3gss:A (1.9) BS01 GSH 2.5.1.18 GO:0000302 ... P09211 9012673 PDBbind: -logKd/Ki=5.82, Ki=1.5uM
    14226 3gss:A (1.9) BS02 EAA 2.5.1.18 GO:0000302 ... P09211 9012673 PDBbind: -logKd/Ki=5.82, Ki=1.5uM
    BindingDB: IC50=2.6e+4nM
    14227 3gss:B (1.9) BS01 GSH 2.5.1.18 GO:0000302 ... P09211 9012673 PDBbind: -logKd/Ki=5.82, Ki=1.5uM
    14228 3gss:B (1.9) BS02 EAA 2.5.1.18 GO:0000302 ... P09211 9012673 PDBbind: -logKd/Ki=5.82, Ki=1.5uM
    BindingDB: IC50=2.6e+4nM
    14229 3gst:A (1.9) BS01 GPR 2.5.1.18 GO:0004364 ... P04905 8110735 MOAD: Ki=0.19uM
    PDBbind: -logKd/Ki=6.72, Ki=0.19uM
    14230 3gst:B (1.9) BS01 GPR 2.5.1.18 GO:0004364 ... P04905 8110735 MOAD: Ki=0.19uM
    PDBbind: -logKd/Ki=6.72, Ki=0.19uM
    14231 3gt9:A (1.7) BS02 516 2.3.2.27 N/A Q96CA5 20189383 PDBbind: -logKd/Ki=3.96, Ki=0.11mM
    BindingDB: Ki=110000nM
    14232 3gt9:B (1.7) BS02 516 2.3.2.27 N/A Q96CA5 20189383 BindingDB: Ki=110000nM
    14233 3gta:A (1.7) BS02 851 2.3.2.27 N/A Q96CA5 20189383 PDBbind: -logKd/Ki=4.28, Ki=53uM
    BindingDB: Ki=53000nM
    14234 3gta:B (1.7) BS02 851 2.3.2.27 N/A Q96CA5 20189383 BindingDB: Ki=53000nM
    14235 3gtc:A (1.9) BS01 GTC 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=4.5mM
    PDBbind: -logKd/Ki=2.35, Ki=4.5mM
    14236 3gtc:A (1.9) BS02 GTC 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=4.5mM
    PDBbind: -logKd/Ki=2.35, Ki=4.5mM
    14237 3gtc:B (1.9) BS01 GTC 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=4.5mM
    14238 3gtc:B (1.9) BS02 GTC 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=4.5mM
    14239 3gtc:B (1.9) BS03 GTC 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=4.5mM
    14240 3gug:A (1.9) BS02 C2U 1.1.1.-
    1.1.1.112
    1.1.1.149
    1.1.1.209
    1.1.1.210
    1.1.1.357
    1.1.1.51
    1.1.1.53
    1.1.1.62
    1.3.1.20    		 GO:0001523 ... Q04828 N/A BindingDB: Ki=5.9nM, IC50=6nM
    14241 3gul:A (2.07) BS01 PYJ 3.2.1.17 GO:0003796 ... P00720 19663503 MOAD: Ka=22800M^-1
    14242 3gul:B (2.07) BS01 PYJ 3.2.1.17 GO:0003796 ... P00720 19663503 MOAD: Ka=22800M^-1
    14243 3gum:A (2.24) BS01 PXY 3.2.1.17 GO:0003796 ... P00720 19663503 MOAD: Ka=6610M^-1
    BindingDB: Kd=151000nM
    14244 3gum:B (2.24) BS01 PXY 3.2.1.17 GO:0003796 ... P00720 19663503 MOAD: Ka=6610M^-1
    BindingDB: Kd=151000nM
    14245 3guo:A (2.16) BS01 IPH 3.2.1.17 GO:0003796 ... P00720 19663503 MOAD: Ka=9150M^-1
    BindingDB: Kd=103000nM
    14246 3guo:B (2.16) BS01 IPH 3.2.1.17 GO:0003796 ... P00720 19663503 MOAD: Ka=9150M^-1
    BindingDB: Kd=103000nM
    14247 3gur:A (2.5) BS01 BYG 2.5.1.18 GO:0004364 ... P28161 19808963 PDBbind: -logKd/Ki=8.00, IC50=0.01uM
    14248 3gus:A (1.53) BS02 N11 2.5.1.18 GO:0000302 ... P09211 19808963 MOAD: Kd=0.9uM
    PDBbind: -logKd/Ki=6.05, Kd=900nM
    BindingDB: IC50=800nM
    14249 3gus:B (1.53) BS02 N11 2.5.1.18 GO:0000302 ... P09211 19808963 MOAD: Kd=0.9uM
    BindingDB: IC50=800nM
    14250 3gut:A (3.59) BS01 dna ? GO:0003677 ... Q04206 19683540 PDBbind: Kd=1.5nM
    14251 3gut:A (3.59) BS02 dna ? GO:0003677 ... Q04206 19683540 PDBbind: Kd=1.5nM
    14252 3gut:B (3.59) BS01 dna ? GO:0003677 ... P19838 19683540 PDBbind: Kd=1.5nM
    14253 3gut:B (3.59) BS02 dna ? GO:0003677 ... P19838 19683540 PDBbind: Kd=1.5nM
    14254 3gut:C (3.59) BS01 dna ? GO:0003677 ... Q04206 19683540 PDBbind: Kd=1.5nM
    14255 3gut:C (3.59) BS02 dna ? GO:0003677 ... Q04206 19683540 PDBbind: Kd=1.5nM
    14256 3gut:D (3.59) BS01 dna ? GO:0003677 ... P19838 19683540 PDBbind: Kd=1.5nM
    14257 3gut:D (3.59) BS02 dna ? GO:0003677 ... P19838 19683540 PDBbind: Kd=1.5nM
    14258 3gut:E (3.59) BS01 dna ? GO:0003677 ... Q04206 19683540 PDBbind: Kd=1.5nM
    14259 3gut:E (3.59) BS02 dna ? GO:0003677 ... Q04206 19683540 PDBbind: Kd=1.5nM
    14260 3gut:F (3.59) BS01 dna ? GO:0003677 ... P19838 19683540 PDBbind: Kd=1.5nM
    14261 3gut:F (3.59) BS02 dna ? GO:0003677 ... P19838 19683540 PDBbind: Kd=1.5nM
    14262 3gut:G (3.59) BS01 dna ? GO:0003677 ... Q04206 19683540 PDBbind: Kd=1.5nM
    14263 3gut:G (3.59) BS02 dna ? GO:0003677 ... Q04206 19683540 PDBbind: Kd=1.5nM
    14264 3gut:H (3.59) BS01 dna ? GO:0003677 ... P19838 19683540 PDBbind: Kd=1.5nM
    14265 3gut:H (3.59) BS02 dna ? GO:0003677 ... P19838 19683540 PDBbind: Kd=1.5nM
    14266 3guz:A (1.67) BS01 PAF 6.3.2.1 GO:0003824 ... P31663 20059543 PDBbind: -logKd/Ki=4.38, Kd=42uM
    14267 3gv9:A (1.8) BS01 GV9 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=7.5mM
    PDBbind: -logKd/Ki=2.12, Ki=7.5mM
    14268 3gv9:A (1.8) BS02 GV9 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=7.5mM
    PDBbind: -logKd/Ki=2.12, Ki=7.5mM
    14269 3gv9:A (1.8) BS03 GV9 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=7.5mM
    PDBbind: -logKd/Ki=2.12, Ki=7.5mM
    14270 3gv9:B (1.8) BS01 GV9 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=7.5mM
    14271 3gvb:A (1.8) BS01 3GV 3.5.2.6 GO:0008800 ... P00811 19416920 MOAD: Ki=2.6mM
    PDBbind: -logKd/Ki=2.59, Ki=2.6mM
    14272 3gvu:A (2.05) BS01 STI 2.7.10.2 GO:0004672 ... P42684 N/A PDBbind: -logKd/Ki=8.00, Kd=10nM
    BindingDB: Kd=10nM, IC50=272nM
    14273 3gvu:A (2.05) BS02 STI 2.7.10.2 GO:0004672 ... P42684 N/A PDBbind: -logKd/Ki=8.00, Kd=10nM
    BindingDB: Kd=10nM, IC50=272nM
    14274 3gw5:A (2.0) BS01 72X 3.4.23.15 GO:0004190 ... P00797 19457666 MOAD: ic50=0.47nM
    PDBbind: -logKd/Ki=9.33, IC50=0.47nM
    BindingDB: IC50=0.47nM
    14275 3gw5:B (2.0) BS01 72X 3.4.23.15 GO:0004190 ... P00797 19457666 MOAD: ic50=0.47nM
    BindingDB: IC50=0.47nM
    14276 3gws:X (2.2) BS01 T3 ? GO:0003677 ... P10828 16781732 PDBbind: -logKd/Ki=10.09, Kd=0.081nM
    14277 3gwt:A (1.75) BS01 066 3.1.4.53 GO:0004114 ... Q07343 19656678 MOAD: ic50=7.94pM
    PDBbind: -logKd/Ki=11.10, IC50=7.94pM
    BindingDB: IC50=0.00794nM
    14278 3gwu:A (2.14) BS02 SRE ? GO:0005886 ... O67854 19430461 MOAD: ic50=19.7uM
    PDBbind: -logKd/Ki=4.71, IC50=19.7uM
    14279 3gwv:A (2.35) BS02 RFX ? GO:0005886 ... O67854 19430461 MOAD: ic50=2.54mM
    PDBbind: -logKd/Ki=2.60, IC50=2.54mM
    14280 3gww:A (2.46) BS02 SFX ? GO:0005886 ... O67854 19430461 MOAD: ic50=355mM
    PDBbind: -logKd/Ki=0.45, IC50=355mM
    14281 3gwx:A (2.4) BS01 EPA ? GO:0003677 ... Q03181 10198642 MOAD: ic50=4uM
    PDBbind: -logKd/Ki=5.40, IC50=4.0uM
    BindingDB: IC50=4000nM
    14282 3gwx:B (2.4) BS01 EPA ? GO:0003677 ... Q03181 10198642 MOAD: ic50=4uM
    BindingDB: IC50=4000nM
    14283 3gx0:A (2.3) BS01 GDS 1.11.1.-
    1.8.4.-    		 GO:0004601 ... P77526 19537707 MOAD: Kd=2.4uM
    PDBbind: -logKd/Ki=3.48, Kd=330uM
    14284 3gx4:X (2.7) BS01 dna ? GO:0003677 ... Q9UTN9 19516334 PDBbind: Kd=0.35nM
    14285 3gx4:X (2.7) BS02 dna ? GO:0003677 ... Q9UTN9 19516334 PDBbind: Kd=0.35nM
    14286 3gxf:B (2.4) BS01 IFM 2.4.1.-
    3.2.1.-
    3.2.1.45
    3.2.1.46    		 GO:0004336 ... P04062 19374450 BindingDB: Ki=1.70nM, IC50=8.20nM
    14287 3gxf:D (2.4) BS01 IFM 2.4.1.-
    3.2.1.-
    3.2.1.45
    3.2.1.46    		 GO:0004336 ... P04062 19374450 BindingDB: Ki=1.70nM, IC50=8.20nM
    14288 3gxl:A (1.8) BS01 QIG 2.7.11.30 GO:0004672 ... P36897 19285388 MOAD: ic50=0.025uM
    PDBbind: -logKd/Ki=7.60, IC50=0.025uM
    BindingDB: IC50=>10000nM
    14289 3gxq:A (2.35) BS01 dna ? GO:0006355 ... A0A0H2XIU6 19759211 PDBbind: Kd=127nM
    14290 3gxq:A (2.35) BS02 dna ? GO:0006355 ... A0A0H2XIU6 19759211 PDBbind: Kd=127nM
    14291 3gxq:B (2.35) BS01 dna ? GO:0006355 ... A0A0H2XIU6 19759211 PDBbind: Kd=127nM
    14292 3gxq:B (2.35) BS02 dna ? GO:0006355 ... A0A0H2XIU6 19759211 PDBbind: Kd=127nM
    14293 3gxt:A (2.7) BS01 NOJ 3.2.1.22 GO:0003824 ... P06280 19374450 PDBbind: -logKd/Ki=4.74, Ki=18uM
    14294 3gxt:B (2.7) BS01 NOJ 3.2.1.22 GO:0003824 ... P06280 19374450 PDBbind: -logKd/Ki=4.74, Ki=18uM
    14295 3gxy:A (2.4) BS01 MAN ? GO:0030246 ... P81180 12110688 PDBbind: -logKd/Ki=5.59, Kd=2.6uM
    14296 3gxy:A (2.4) BS02 MAN ? GO:0030246 ... P81180 12110688 PDBbind: -logKd/Ki=5.59, Kd=2.6uM
    14297 3gxy:A (2.4) BS03 MAN ? GO:0030246 ... P81180 12110688 PDBbind: -logKd/Ki=5.59, Kd=2.6uM
    14298 3gxy:A (2.4) BS04 MAN ? GO:0030246 ... P81180 12110688 PDBbind: -logKd/Ki=5.59, Kd=2.6uM
    14299 3gxy:B (2.4) BS01 MAN ? GO:0030246 ... P81180 12110688 PDBbind: -logKd/Ki=5.59, Kd=2.6uM
    14300 3gxy:B (2.4) BS02 MAN ? GO:0030246 ... P81180 12110688 PDBbind: -logKd/Ki=5.59, Kd=2.6uM
    14301 3gxy:B (2.4) BS03 OPM ? GO:0030246 ... P81180 12110688 PDBbind: -logKd/Ki=5.59, Kd=2.6uM
    14302 3gxy:B (2.4) BS04 MAN ? GO:0030246 ... P81180 12110688 PDBbind: -logKd/Ki=5.59, Kd=2.6uM
    14303 3gxy:B (2.4) BS05 MAN ? GO:0030246 ... P81180 12110688 PDBbind: -logKd/Ki=5.59, Kd=2.6uM
    14304 3gy2:A (1.57) BS02 BRN 3.4.21.4 GO:0004175 ... P00760 20356563 MOAD: Kd=1.8uM
    PDBbind: -logKd/Ki=5.74, Kd=1.80uM
    14305 3gy3:A (1.7) BS02 PNT 3.4.21.4 GO:0004175 ... P00760 20356563 MOAD: Kd=2.36uM
    PDBbind: -logKd/Ki=5.63, Kd=2.36uM
    14306 3gy4:A (1.55) BS02 PBZ 3.4.21.4 GO:0004175 ... P00760 20356563 MOAD: Kd=8uM
    PDBbind: -logKd/Ki=5.10, Kd=8uM
    14307 3gy5:A (1.57) BS02 BRN 3.4.21.4 GO:0004175 ... P00760 20356563 MOAD: Kd=1.8uM
    14308 3gy6:A (1.7) BS02 BRN 3.4.21.4 GO:0004175 ... P00760 20356563 MOAD: Kd=1.8uM
    14309 3gy7:A (1.55) BS02 BEN 3.4.21.4 GO:0004175 ... P00760 20356563 MOAD: Kd=30uM
    PDBbind: -logKd/Ki=4.52, Kd=30uM
    14310 3gy8:A (1.75) BS02 BRN 3.4.21.4 GO:0004175 ... P00760 20356563 MOAD: Kd=1.8uM
    14311 3gyf:A (1.7) BS01 51P 1.5.1.3 GO:0000900 ... P00374 19652333 MOAD: ic50=12.3nM
    BindingDB: IC50=1900nM
    14312 3gyh:X (2.8) BS01 dna ? GO:0003677 ... Q9UTN9 19516334 PDBbind: Kd=0.016nM
    14313 3gyh:X (2.8) BS02 dna ? GO:0003677 ... Q9UTN9 19516334 PDBbind: Kd=0.016nM
    14314 3gyn:A (2.15) BS01 B42 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 19796938 MOAD: ic50=0.047uM
    PDBbind: -logKd/Ki=7.21, IC50=0.061uM
    14315 3gyn:B (2.15) BS01 B42 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 19796938 MOAD: ic50=0.047uM
    14316 3gz8:A (2.43) BS01 APR ? N/A Q8EFJ3 19604474 MOAD: Kd=17.9uM
    14317 3gz8:A (2.43) BS02 APR ? N/A Q8EFJ3 19604474 MOAD: Kd=17.9uM
    14318 3gz8:B (2.43) BS01 APR ? N/A Q8EFJ3 19604474 MOAD: Kd=17.9uM
    14319 3gz8:B (2.43) BS02 APR ? N/A Q8EFJ3 19604474 MOAD: Kd=17.9uM
    14320 3gz8:C (2.43) BS01 APR ? N/A Q8EFJ3 19604474 MOAD: Kd=17.9uM
    14321 3gz8:C (2.43) BS02 APR ? N/A Q8EFJ3 19604474 MOAD: Kd=17.9uM
    14322 3gz8:D (2.43) BS01 APR ? N/A Q8EFJ3 19604474 MOAD: Kd=17.9uM
    14323 3gz8:D (2.43) BS02 APR ? N/A Q8EFJ3 19604474 MOAD: Kd=17.9uM
    14324 3gz9:A (2.0) BS02 D32 ? GO:0003677 ... Q03181 19464171 MOAD: Ki=0.004uM
    PDBbind: -logKd/Ki=8.40, IC50=4nM
    BindingDB: EC50=54nM, Ki=4nM
    14325 3gzn:B (3.0) BS02 B39 6.2.1.64 GO:0000278 ... Q8TBC4 20129059 PDBbind: -logKd/Ki=8.00, IC50=10nM
    BindingDB: IC50=5.0nM
    14326 3gzn:D (3.0) BS02 B39 6.2.1.64 GO:0000278 ... Q8TBC4 20129059 BindingDB: IC50=5.0nM
    14327 3h03:A (1.9) BS01 UBP ? GO:0015276 ... P19491 19284741 MOAD: ic50=135uM
    PDBbind: -logKd/Ki=3.87, IC50=135uM
    14328 3h03:B (1.9) BS01 UBP ? GO:0015276 ... P19491 19284741 MOAD: ic50=135uM
    14329 3h03:D (1.9) BS01 UBP ? GO:0015276 ... P19491 19284741 MOAD: ic50=135uM
    14330 3h03:G (1.9) BS01 UBP ? GO:0015276 ... P19491 19284741 MOAD: ic50=135uM
    14331 3h06:B (2.8) BS01 VBP ? GO:0015276 ... P19491 19284741 BindingDB: IC50=290000nM
    14332 3h06:E (2.8) BS01 VBP ? GO:0015276 ... P19491 19284741 BindingDB: IC50=290000nM
    14333 3h06:G (2.8) BS01 VBP ? GO:0015276 ... P19491 19284741 PDBbind: -logKd/Ki=3.53, IC50=292uM
    BindingDB: IC50=290000nM
    14334 3h06:H (2.8) BS01 VBP ? GO:0015276 ... P19491 19284741 BindingDB: IC50=290000nM
    14335 3h06:J (2.8) BS01 VBP ? GO:0015276 ... P19491 19284741 BindingDB: IC50=290000nM
    14336 3h06:L (2.8) BS01 VBP ? GO:0015276 ... P19491 19284741 BindingDB: IC50=290000nM
    14337 3h06:N (2.8) BS01 VBP ? GO:0015276 ... P19491 19284741 BindingDB: IC50=290000nM
    14338 3h06:P (2.8) BS01 VBP ? GO:0015276 ... P19491 19284741 BindingDB: IC50=290000nM
    14339 3h0a:A (2.1) BS02 9RA ? GO:0003677 ... P19793 19464171 BindingDB: EC50=33nM, Kd=36nM, Ki=379nM
    14340 3h0a:D (2.1) BS02 D30 ? GO:0003677 ... P37231 19464171 MOAD: Ki=0.033uM
    PDBbind: -logKd/Ki=7.48, Ki=33nM
    BindingDB: EC50=160nM, Ki=33nM
    14341 3h0b:A (2.7) BS01 B35 3.4.23.46 GO:0004190 ... P56817 19409780 PDBbind: -logKd/Ki=5.49, IC50=3.2uM
    14342 3h0c:A (2.66) BS01 PS4 3.4.14.5 GO:0001618 ... P27487 N/A BindingDB: IC50=0.38nM
    14343 3h0c:B (2.66) BS01 PS4 3.4.14.5 GO:0001618 ... P27487 N/A BindingDB: IC50=0.38nM
    14344 3h0d:A (2.4) BS01 dna ? GO:0003677 ... C3W947 19498169 PDBbind: Kd=22.2nM
    14345 3h0d:A (2.4) BS02 dna ? GO:0003677 ... C3W947 19498169 PDBbind: Kd=22.2nM
    14346 3h0d:B (2.4) BS01 dna ? GO:0003677 ... C3W947 19498169 PDBbind: Kd=22.2nM
    14347 3h0d:B (2.4) BS02 dna ? GO:0003677 ... C3W947 19498169 PDBbind: Kd=22.2nM
    14348 3h0e:A (1.997) BS01 H0E 3.4.22.56 GO:0001554 ... P42574 19836248 PDBbind: -logKd/Ki=8.15, IC50=7nM
    14349 3h0j:A (2.8) BS01 B36 6.3.4.14
    6.4.1.2    		 GO:0003989 ... Q00955 20219367 PDBbind: -logKd/Ki=6.49, IC50=325nM
    14350 3h0j:B (2.8) BS01 B36 6.3.4.14
    6.4.1.2    		 GO:0003989 ... Q00955 20219367 PDBbind: -logKd/Ki=6.49, IC50=325nM
    14351 3h0j:B (2.8) BS02 B36 6.3.4.14
    6.4.1.2    		 GO:0003989 ... Q00955 20219367 PDBbind: -logKd/Ki=6.49, IC50=325nM
    14352 3h0q:A (2.5) BS01 B37 6.3.4.14
    6.4.1.2    		 GO:0003989 ... Q00955 20219367 PDBbind: -logKd/Ki=6.07, IC50=842nM
    14353 3h0q:B (2.5) BS01 B37 6.3.4.14
    6.4.1.2    		 GO:0003989 ... Q00955 20219367 PDBbind: -logKd/Ki=6.07, IC50=842nM
    14354 3h0q:B (2.5) BS02 B37 6.3.4.14
    6.4.1.2    		 GO:0003989 ... Q00955 20219367 PDBbind: -logKd/Ki=6.07, IC50=842nM
    14355 3h0s:A (2.43) BS01 B38 6.3.4.14
    6.4.1.2    		 GO:0003989 ... Q00955 20219367 PDBbind: -logKd/Ki=6.20, IC50=634nM
    14356 3h0s:B (2.43) BS01 B38 6.3.4.14
    6.4.1.2    		 GO:0003989 ... Q00955 20219367 PDBbind: -logKd/Ki=6.20, IC50=634nM
    14357 3h0v:A (2.24) BS01 M2T 4.1.1.50 GO:0004014 ... P17707 19527050 MOAD: ic50=15uM
    PDBbind: -logKd/Ki=4.82, IC50=15uM
    14358 3h0v:B (2.24) BS01 M2T 4.1.1.50 GO:0004014 ... P17707 19527050 PDBbind: -logKd/Ki=4.82, IC50=15uM
    14359 3h0w:A (1.81) BS01 N8M 4.1.1.50 GO:0004014 ... P17707 19527050 MOAD: ic50=600nM
    PDBbind: -logKd/Ki=6.22, IC50=600nM
    BindingDB: IC50=600nM
    14360 3h0w:B (1.81) BS01 N8M 4.1.1.50 GO:0004014 ... P17707 19527050 PDBbind: -logKd/Ki=6.22, IC50=600nM
    BindingDB: IC50=600nM
    14361 3h0y:A (2.5) BS01 48B 2.7.11.1 GO:0000212 ... O14965 19402633 MOAD: ic50=0.006uM
    PDBbind: -logKd/Ki=8.22, IC50=6nM
    BindingDB: IC50=6nM
    14362 3h0z:A (2.92) BS01 45B 2.7.11.1 GO:0000212 ... O14965 19402633 PDBbind: -logKd/Ki=8.37, IC50=4.3nM
    BindingDB: IC50=4.3nM
    14363 3h0z:B (2.92) BS01 45B 2.7.11.1 GO:0000212 ... O14965 19402633 BindingDB: IC50=4.3nM
    14364 3h0z:C (2.92) BS01 45B 2.7.11.1 GO:0000212 ... O14965 19402633 BindingDB: IC50=4.3nM
    14365 3h1x:A (1.4) BS01 IMN 3.1.1.4 GO:0004623 ... P59071 19462410 MOAD: Kd=0.000000064M
    PDBbind: -logKd/Ki=5.89, Kd=1.3uM
    14366 3h21:A (2.32) BS01 B52 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=19.8uM
    PDBbind: -logKd/Ki=4.70, IC50=19.8uM
    BindingDB: IC50=19800nM
    14367 3h21:B (2.32) BS01 B52 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=19.8uM
    BindingDB: IC50=19800nM
    14368 3h22:A (2.4) BS01 B53 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=8uM
    PDBbind: -logKd/Ki=5.10, IC50=8uM
    BindingDB: IC50=8000nM
    14369 3h22:B (2.4) BS01 B53 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=8uM
    BindingDB: IC50=8000nM
    14370 3h23:A (2.2) BS01 B54 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=19.3uM
    PDBbind: -logKd/Ki=4.71, IC50=19.3uM
    BindingDB: IC50=19300nM
    14371 3h23:B (2.2) BS01 B54 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=19.3uM
    BindingDB: IC50=19300nM
    14372 3h26:A (2.5) BS01 B56 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=32.4uM
    PDBbind: -logKd/Ki=4.49, IC50=32.4uM
    BindingDB: Kd=5260nM, IC50=32400nM
    14373 3h26:B (2.5) BS01 B56 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=32.4uM
    BindingDB: Kd=5260nM, IC50=32400nM
    14374 3h2a:A (2.4) BS01 B57 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=108.9uM
    PDBbind: -logKd/Ki=3.96, IC50=108.9uM
    BindingDB: IC50=108900nM
    14375 3h2a:B (2.4) BS01 B57 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=108.9uM
    BindingDB: IC50=108900nM
    14376 3h2c:A (2.6) BS01 B58 2.5.1.15 GO:0004156 ... Q81VW8 19899766 PDBbind: -logKd/Ki=3.30, IC50=500uM
    BindingDB: IC50=>500000nM
    14377 3h2c:B (2.6) BS01 B58 2.5.1.15 GO:0004156 ... Q81VW8 19899766 BindingDB: IC50=>500000nM
    14378 3h2f:A (2.2) BS01 B60 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=86.7uM
    PDBbind: -logKd/Ki=4.06, IC50=86.7uM
    BindingDB: IC50=86700nM
    14379 3h2f:B (2.2) BS01 B60 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=86.7uM
    BindingDB: IC50=86700nM
    14380 3h2m:A (2.31) BS01 B61 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=215uM
    PDBbind: -logKd/Ki=3.67, IC50=215uM
    BindingDB: IC50=215000nM
    14381 3h2m:B (2.31) BS01 B61 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=215uM
    BindingDB: IC50=215000nM
    14382 3h2n:A (2.4) BS01 B62 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=212.6uM
    PDBbind: -logKd/Ki=3.67, IC50=212.6uM
    14383 3h2n:B (2.4) BS01 B62 2.5.1.15 GO:0004156 ... Q81VW8 19899766 MOAD: ic50=212.6uM
    14384 3h2o:A (2.7) BS01 B63 2.5.1.15 GO:0004156 ... Q81VW8 19899766 PDBbind: -logKd/Ki=4.59, IC50=25.9uM
    BindingDB: IC50=25900nM
    14385 3h2o:B (2.7) BS01 B63 2.5.1.15 GO:0004156 ... Q81VW8 19899766 BindingDB: IC50=25900nM
    14386 3h30:A (1.56) BS01 RFZ 2.7.11.1 GO:0004672 ... P68400 18291315 MOAD: Ki=29.2uM
    PDBbind: -logKd/Ki=4.53, Ki=29.2uM
    BindingDB: Ki=4500nM, IC50=13000nM
    14387 3h30:A (1.56) BS02 RFZ 2.7.11.1 GO:0004672 ... P68400 18291315 MOAD: Ki=29.2uM
    PDBbind: -logKd/Ki=4.53, Ki=29.2uM
    BindingDB: Ki=4500nM, IC50=13000nM
    14388 3h30:B (1.56) BS01 RFZ 2.7.11.1 GO:0004672 ... P68400 18291315 MOAD: Ki=29.2uM
    BindingDB: Ki=4500nM, IC50=13000nM
    14389 3h3c:A (2.0) BS01 P1E 2.7.10.2 GO:0004672 ... Q14289 19428251 MOAD: ic50=140nM
    PDBbind: -logKd/Ki=6.85, IC50=140nM
    BindingDB: IC50=88nM
    14390 3h4g:A (1.85) BS02 FID 1.1.1.19
    1.1.1.2
    1.1.1.20
    1.1.1.372
    1.1.1.54
    1.6.-.-    		 GO:0004032 ... P50578 16107153 MOAD: ic50=2.5uM
    14391 3h4v:A (2.4) BS02 DVP 1.5.1.33 GO:0004155 ... Q01782 18245389 MOAD: Ki=0.1uM
    BindingDB: Ki=100nM
    14392 3h4v:B (2.4) BS02 DVP 1.5.1.33 GO:0004155 ... Q01782 18245389 MOAD: Ki=0.1uM
    BindingDB: Ki=100nM
    14393 3h4v:C (2.4) BS02 DVP 1.5.1.33 GO:0004155 ... Q01782 18245389 MOAD: Ki=0.1uM
    BindingDB: Ki=100nM
    14394 3h4v:D (2.4) BS02 DVP 1.5.1.33 GO:0004155 ... Q01782 18245389 MOAD: Ki=0.1uM
    BindingDB: Ki=100nM
    14395 3h4v:E (2.4) BS02 DVP 1.5.1.33 GO:0004155 ... Q01782 18245389 MOAD: Ki=0.1uM
    BindingDB: Ki=100nM
    14396 3h4v:F (2.4) BS02 DVP 1.5.1.33 GO:0004155 ... Q01782 18245389 MOAD: Ki=0.1uM
    BindingDB: Ki=100nM
    14397 3h4v:G (2.4) BS02 DVP 1.5.1.33 GO:0004155 ... Q01782 18245389 MOAD: Ki=0.1uM
    BindingDB: Ki=100nM
    14398 3h4v:H (2.4) BS02 DVP 1.5.1.33 GO:0004155 ... Q01782 18245389 MOAD: Ki=0.1uM
    BindingDB: Ki=100nM
    14399 3h52:A (2.8) BS02 486 ? N/A P04150 19913032 BindingDB: IC50=1.1nM, Ki=1.2nM, EC50=872nM, Kd=15nM
    14400 3h52:B (2.8) BS02 486 ? N/A P04150 19913032 BindingDB: IC50=1.1nM, Ki=1.2nM, EC50=872nM, Kd=15nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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