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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    11201 2ybu:F (2.25) BS01 CX9 3.2.1.14 GO:0004553 ... Q9BZP6 21609838 MOAD: Ki=0.42uM
    BindingDB: IC50=920nM
    11202 2ybu:F (2.25) BS02 CX9 3.2.1.14 GO:0004553 ... Q9BZP6 21609838 MOAD: Ki=0.42uM
    BindingDB: IC50=920nM
    11203 2yc0:A (2.15) BS02 2HG 1.14.11.30
    1.14.11.n4    		 GO:0003714 ... Q9NWT6 21460794 MOAD: ic50=1500uM
    PDBbind: -logKd/Ki=2.82, IC50=1500uM
    11204 2yc3:A (1.4) BS01 MW5 2.7.7.60 GO:0003824 ... P69834 21766403 MOAD: ic50=0.14uM
    PDBbind: -logKd/Ki=6.85, IC50=0.14uM
    11205 2yc5:A (1.6) BS01 6BC 2.7.7.60 GO:0003824 ... P69834 21766403 MOAD: ic50=0.035uM
    PDBbind: -logKd/Ki=7.46, IC50=0.035uM
    BindingDB: IC50=35nM
    11206 2ycf:A (1.77) BS01 YCF 2.7.11.1 GO:0004672 ... O96017 21963792 MOAD: ic50=0.03nM
    PDBbind: -logKd/Ki=10.52, IC50=0.03nM
    11207 2ych:A (2.2) BS02 ATP ? GO:0005524 ... Q72IW8 21596754 PDBbind: -logKd/Ki=3.00, Kd<1mM
    11208 2ycm:A (1.8) BS01 30A 2.7.7.60 GO:0003824 ... P69834 21766403 MOAD: ic50=274uM
    PDBbind: -logKd/Ki=3.56, IC50=274uM
    11209 2ycq:A (2.05) BS01 UPX 2.7.11.1 GO:0004672 ... O96017 21963792 MOAD: ic50=0.14nM
    PDBbind: -logKd/Ki=9.85, IC50=0.14nM
    11210 2ycr:A (2.2) BS01 HCW 2.7.11.1 GO:0004672 ... O96017 21963792 MOAD: ic50=69.6nM
    PDBbind: -logKd/Ki=7.16, IC50=69.60nM
    11211 2ycs:A (2.35) BS01 NXP 2.7.11.1 GO:0004672 ... O96017 21963792 MOAD: ic50=1.36nM
    PDBbind: -logKd/Ki=8.87, IC50=1.36nM
    11212 2yd0:A (2.7) BS02 BES 3.4.11.- GO:0001525 ... Q9NZ08 21508329 BindingDB: IC50=50000nM
    11213 2yde:A (2.28) BS02 S2G 1.14.11.30
    1.14.11.n4    		 GO:0003714 ... Q9NWT6 21460794 MOAD: ic50=189uM
    PDBbind: -logKd/Ki=3.72, IC50=189uM
    11214 2ydf:A (2.75) BS01 IO3 ? GO:0003677 ... P02768 21501503 PDBbind: -logKd/Ki=7.66, Kd=22nM
    11215 2ydf:A (2.75) BS02 IO3 ? GO:0003677 ... P02768 21501503 PDBbind: -logKd/Ki=7.66, Kd=22nM
    11216 2ydf:A (2.75) BS03 IO3 ? GO:0003677 ... P02768 21501503 PDBbind: -logKd/Ki=7.66, Kd=22nM
    11217 2ydf:A (2.75) BS04 IO3 ? GO:0003677 ... P02768 21501503 PDBbind: -logKd/Ki=7.66, Kd=22nM
    11218 2ydi:A (1.6) BS01 YDI 2.7.11.1 GO:0000077 ... O14757 22551018 PDBbind: -logKd/Ki=6.82, IC50=0.15uM
    BindingDB: IC50=150nM
    11219 2ydj:A (1.85) BS01 YDJ 2.7.11.1 GO:0000077 ... O14757 22551018 MOAD: ic50=0.005uM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    BindingDB: IC50=6.0nM, EC50=10nM
    11220 2ydj:B (1.85) BS01 YDJ 2.7.11.1 GO:0000077 ... O14757 22551018 MOAD: ic50=0.005uM
    BindingDB: IC50=6.0nM, EC50=10nM
    11221 2ydk:A (1.9) BS01 YDK 2.7.11.1 GO:0000077 ... O14757 22551018 MOAD: ic50=0.007uM
    PDBbind: -logKd/Ki=8.15, IC50=7nM
    BindingDB: IC50=7nM, EC50=20nM
    11222 2ydm:A (2.44) BS02 SLC 3.4.15.1 GO:0006508 ... P12821 21810173 MOAD: ic50=36.4nM
    PDBbind: -logKd/Ki=7.44, IC50=36.4nM
    11223 2ydo:A (3.0) BS01 ADN ? GO:0001609 ... P29274 21593763 PDBbind: -logKd/Ki=7.51, Ki=30.9nM
    BindingDB: EC50=700nM, Ki=700nM
    11224 2ydt:A (1.6) BS01 EDG 3.2.1.55 GO:0016798 ... B8ZY56 21773614 PDBbind: -logKd/Ki=5.52, Ki=3.0uM
    11225 2ydt:A (1.6) BS02 AHR 3.2.1.55 GO:0016798 ... B8ZY56 21773614 PDBbind: -logKd/Ki=5.52, Ki=3.0uM
    11226 2ydv:A (2.6) BS01 NEC ? GO:0001609 ... P29274 21593763 PDBbind: -logKd/Ki=7.86, Ki=13.8nM
    BindingDB: Ki=16nM, IC50=3.7nM, EC50=251nM
    11227 2ydw:A (1.9) BS01 WSH ? N/A P25440 21568322 MOAD: Kd=46nM
    BindingDB: Kd=52nM, IC50=29.9nM
    11228 2ydw:B (1.9) BS01 WSH ? N/A P25440 21568322 MOAD: Kd=46nM
    PDBbind: -logKd/Ki=7.34, Kd=46.0nM
    BindingDB: Kd=52nM, IC50=29.9nM
    11229 2ydw:C (1.9) BS01 WSH ? N/A P25440 21568322 MOAD: Kd=46nM
    BindingDB: Kd=52nM, IC50=29.9nM
    11230 2ye9:A (2.2) BS01 2D4 3.6.4.10 GO:0005524 ... P07900 21561141 PDBbind: -logKd/Ki=6.22, IC50=0.6uM
    11231 2yek:A (1.98) BS01 EAM ? N/A P25440 21568322 MOAD: ic50=32.5nM
    PDBbind: -logKd/Ki=7.21, Kd=61.3nM
    BindingDB: IC50=32.5nM, Ki=74nM, Kd=100nM
    11232 2yek:B (1.98) BS01 EAM ? N/A P25440 21568322 MOAD: ic50=32.5nM
    BindingDB: IC50=32.5nM, Ki=74nM, Kd=100nM
    11233 2yek:C (1.98) BS01 EAM ? N/A P25440 21568322 MOAD: ic50=32.5nM
    BindingDB: IC50=32.5nM, Ki=74nM, Kd=100nM
    11234 2yel:A (1.65) BS01 WSH ? N/A O60885 21568322 MOAD: ic50=15.5nM
    PDBbind: -logKd/Ki=7.28, Kd=52.5nM
    BindingDB: Kd=19nM, IC50=15.5nM
    11235 2yem:A (2.3) BS01 WSH ? N/A O60885 21568322 MOAD: ic50=15.5nM
    PDBbind: -logKd/Ki=7.81, IC50=15.5nM
    BindingDB: Kd=19nM, IC50=15.5nM
    11236 2yem:B (2.3) BS01 WSH ? N/A O60885 21568322 MOAD: ic50=15.5nM
    BindingDB: Kd=19nM, IC50=15.5nM
    11237 2yer:A (1.83) BS01 TQ1 2.7.11.1 GO:0000077 ... O14757 22342147 MOAD: ic50=0.02uM
    PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    11238 2yex:A (1.3) BS01 YEX 2.7.11.1 GO:0000077 ... O14757 22342147 MOAD: ic50=0.0001uM
    PDBbind: -logKd/Ki=10.00, IC50=0.1nM
    BindingDB: IC50=0.100000nM
    11239 2yfe:A (2.0) BS01 YFE ? GO:0003677 ... P37231 22509006 MOAD: Ki=0.236uM
    PDBbind: -logKd/Ki=6.63, Ki=0.236uM
    BindingDB: EC50=458nM, Kd=236nM
    11240 2yfe:B (2.0) BS01 YFE ? GO:0003677 ... P37231 22509006 MOAD: Ki=0.236uM
    BindingDB: EC50=458nM, Kd=236nM
    11241 2yfx:A (1.7) BS01 VGH 2.7.10.1 GO:0004672 ... Q9UM73 24432909 PDBbind: -logKd/Ki=8.09, Ki=8.2nM
    BindingDB: IC50=20nM, Ki=8.2nM, EC50=22840nM, Kd=3.3nM
    11242 2yga:A (2.37) BS01 GDM ? GO:0005524 ... P02829 21778327 MOAD: Kd=24.5uM
    PDBbind: -logKd/Ki=4.61, Kd=24.5uM
    11243 2yge:A (1.956) BS01 GDM ? GO:0005524 ... P02829 21778327 MOAD: Kd=8.62uM
    PDBbind: -logKd/Ki=5.06, Kd=8.62uM
    11244 2ygf:A (2.0) BS01 GDM ? GO:0005524 ... P02829 21778327 MOAD: Kd~10uM
    PDBbind: -logKd/Ki=5.09, Kd=8.06uM
    11245 2yh1:A (-1.00) BS01 rna ? GO:0003676 ... P26368 21753750 PDBbind: Kd=1.32uM
    11246 2yhd:A (2.2) BS01 TES ? N/A P10275 21846139 BindingDB: IC50=2.7nM, Ki=3.2nM, EC50=1.1nM
    11247 2yhd:A (2.2) BS02 AV6 ? N/A P10275 21846139 MOAD: Ki=23uM
    PDBbind: -logKd/Ki=4.64, Ki=23.0uM
    BindingDB: IC50=18640nM
    11248 2yi0:A (1.6) BS01 YI0 3.6.4.10 GO:0005524 ... P07900 22984537 MOAD: Kd=7.5nM
    PDBbind: -logKd/Ki=8.12, Kd=7.5nM
    BindingDB: Kd=13nM
    11249 2yi5:A (2.5) BS01 YI5 3.6.4.10 GO:0005524 ... P07900 22984537 MOAD: Kd=39nM
    PDBbind: -logKd/Ki=7.41, Kd=39nM
    BindingDB: Kd=34nM
    11250 2yi6:A (1.8) BS01 6QM 3.6.4.10 GO:0005524 ... P07900 22984537 BindingDB: Kd=42nM
    11251 2yi7:A (1.4) BS01 BZ8 3.6.4.10 GO:0005524 ... P07900 22984537 MOAD: Kd=4.8nM
    PDBbind: -logKd/Ki=8.32, Kd=4.8nM
    BindingDB: Kd=6.3nM
    11252 2yig:A (1.7) BS01 5EL 3.4.24.- GO:0004222 ... P45452 21669521 MOAD: ic50=79.4nM
    PDBbind: -logKd/Ki=7.10, IC50=79.4nM
    BindingDB: IC50=125.89nM
    11253 2yig:B (1.7) BS01 5EL 3.4.24.- GO:0004222 ... P45452 21669521 MOAD: ic50=79.4nM
    BindingDB: IC50=125.89nM
    11254 2yim:A (1.41) BS01 MC4 5.1.99.4 GO:0003824 ... O06543 22360758 MOAD: Kd=120uM
    11255 2yim:B (1.41) BS01 MC4 5.1.99.4 GO:0003824 ... O06543 22360758 MOAD: Kd=120uM
    11256 2yim:C (1.41) BS01 MC4 5.1.99.4 GO:0003824 ... O06543 22360758 MOAD: Kd=120uM
    11257 2yim:D (1.41) BS01 MC4 5.1.99.4 GO:0003824 ... O06543 22360758 MOAD: Kd=120uM
    11258 2yiq:A (1.89) BS01 YIQ 2.7.11.1 GO:0004672 ... O96017 21907711 MOAD: ic50=12.67nM
    PDBbind: -logKd/Ki=7.90, IC50=12.67nM
    11259 2yir:A (2.1) BS01 YIR 2.7.11.1 GO:0004672 ... O96017 21907711 MOAD: ic50=0.17nM
    PDBbind: -logKd/Ki=9.77, IC50=0.17nM
    11260 2yis:A (2.0) BS01 YIS 2.7.11.24 GO:0000077 ... Q16539 21888439 PDBbind: -logKd/Ki=8.77, IC50=1.7nM
    BindingDB: Kd=0.001000nM
    11261 2yit:A (2.2) BS01 YIT 2.7.11.1 GO:0004672 ... O96017 21907711 MOAD: ic50=0.29nM
    PDBbind: -logKd/Ki=9.54, IC50=0.29nM
    11262 2yiu:A (2.7) BS03 SMA 1.10.2.2 GO:0005886 ... P05418 21996020 PDBbind: -logKd/Ki=6.89, IC50=130nM
    11263 2yiu:D (2.7) BS03 SMA 1.10.2.2 GO:0005886 ... P05418 21996020 PDBbind: -logKd/Ki=6.89, IC50=130nM
    11264 2yiu:F (2.7) BS01 SMA 7.1.1.8 GO:0005886 ... P05417 21996020 PDBbind: -logKd/Ki=6.89, IC50=130nM
    11265 2yiv:X (1.28) BS06 NBN 1.2.7.4 GO:0003824 ... Q9F8A8 21904889 PDBbind: -logKd/Ki=2.78, Ki=1.66mM
    11266 2yiw:A (2.0) BS01 YIW 2.7.11.24 GO:0000077 ... Q16539 21888439 PDBbind: -logKd/Ki=9.10, IC50=0.8nM
    BindingDB: Kd=0.400000nM
    11267 2yix:A (2.3) BS01 YIX 2.7.11.24 GO:0000077 ... Q16539 21888439 MOAD: Kd=3.3nM
    PDBbind: -logKd/Ki=8.48, Kd=3.3nM
    BindingDB: Kd=3.3nM, IC50=58nM
    11268 2yj2:A (1.15) BS01 YJ2 3.4.22.15 GO:0006508 ... P07711 21898833 PDBbind: -logKd/Ki=7.92, IC50=0.012uM
    11269 2yj8:A (1.3) BS01 YJ8 3.4.22.15 GO:0006508 ... P07711 21898833 PDBbind: -logKd/Ki=8.19, IC50=0.0065uM
    11270 2yj9:A (1.35) BS01 YJ9 3.4.22.15 GO:0006508 ... P07711 21898833 PDBbind: -logKd/Ki=7.02, IC50=0.095uM
    11271 2yja:B (1.82) BS02 EST ? N/A P03372 21612236 BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    11272 2yjb:A (1.4) BS01 YJ9 3.4.22.15 GO:0006508 ... P07711 21898833 PDBbind: -logKd/Ki=7.02, IC50=0.095uM
    11273 2yjc:A (1.14) BS01 424 3.4.22.15 GO:0006508 ... P07711 21898833 PDBbind: -logKd/Ki=7.66, IC50=0.022uM
    11274 2yje:A (3.1) BS01 LAB 3.6.4.- GO:0000287 ... P68135 21673315 BindingDB: IC50=8470nM
    11275 2yje:B (3.1) BS02 LAB 3.6.4.- GO:0000287 ... P68135 21673315 BindingDB: IC50=8470nM
    11276 2yje:C (3.1) BS01 LAB 3.6.4.- GO:0000287 ... P68135 21673315 BindingDB: IC50=8470nM
    11277 2yjf:A (3.5) BS01 LAB 3.6.4.- GO:0000287 ... P68135 21673315 BindingDB: IC50=8470nM
    11278 2yjf:C (3.5) BS01 LAB 3.6.4.- GO:0000287 ... P68135 21673315 BindingDB: IC50=8470nM
    11279 2yjp:A (2.26) BS01 CYS ? N/A Q5F5B5 22138345 MOAD: Kd=21nM
    11280 2yjp:B (2.26) BS02 CYS ? N/A Q5F5B5 22138345 MOAD: Kd=21nM
    11281 2yjp:C (2.26) BS01 CYS ? N/A Q5F5B5 22138345 MOAD: Kd=21nM
    11282 2yjq:A (2.25) BS01 BGC 3.2.1.151'
    '3.2.1.4    		 N/A Q1A2D0 21795708 PDBbind: -logKd/Ki=5.28, Ki=5.2uM
    11283 2yjq:A (2.25) BS02 BGC 3.2.1.151'
    '3.2.1.4    		 N/A Q1A2D0 21795708 PDBbind: -logKd/Ki=5.28, Ki=5.2uM
    11284 2yjq:A (2.25) BS03 OXZ 3.2.1.151'
    '3.2.1.4    		 N/A Q1A2D0 21795708 PDBbind: -logKd/Ki=5.28, Ki=5.2uM
    11285 2yjw:A (1.61) BS01 YJW 3.6.4.10 GO:0005524 ... P07900 21972823 PDBbind: -logKd/Ki=5.12, IC50=7.6uM
    11286 2yjx:A (1.83) BS01 YJX 3.6.4.10 GO:0005524 ... P07900 21972823 PDBbind: -logKd/Ki=5.12, IC50=7.6uM
    11287 2yk1:H (1.85) BS01 NCT N/A N/A N/A 22079050 MOAD: Kd=7.4nM
    PDBbind: -logKd/Ki=8.13, Kd=7.4nM
    11288 2yk1:L (1.85) BS01 NCT N/A N/A N/A 22079050 PDBbind: -logKd/Ki=8.13, Kd=7.4nM
    11289 2yk9:A (1.32) BS01 YK9 3.6.4.10 GO:0005524 ... P07900 21972823 PDBbind: -logKd/Ki=5.09, IC50=8.1uM
    11290 2ykb:A (1.93) BS01 YKB 3.6.4.10 GO:0005524 ... P07900 21972823 PDBbind: -logKd/Ki=5.96, IC50=1.1uM
    11291 2ykc:A (1.67) BS01 YKC 3.6.4.10 GO:0005524 ... P07900 21972823 PDBbind: -logKd/Ki=6.11, IC50=0.78uM
    11292 2yke:A (1.43) BS01 YKE 3.6.4.10 GO:0005524 ... P07900 21972823 PDBbind: -logKd/Ki=5.96, IC50=1.1uM
    11293 2yki:A (1.67) BS01 YKI 3.6.4.10 GO:0005524 ... P07900 21972823 MOAD: Kd=0.35nM
    PDBbind: -logKd/Ki=9.46, Kd=0.35nM
    11294 2ykj:A (1.46) BS01 YKJ 3.6.4.10 GO:0005524 ... P07900 21972823 PDBbind: -logKd/Ki=6.21, IC50=0.61uM
    11295 2ylc:A (1.3) BS01 U ? GO:0003723 ... P0A1R0 21737752 PDBbind: -logKd/Ki=7.89, Kd=13nM
    11296 2ylg:A (1.05) BS02 CMO ? GO:0005506 ... P00138 21900609 MOAD: Kd=28mM
    11297 2yln:A (1.12) BS01 CYS ? N/A Q5F9M1 22138345 MOAD: Kd=0.021uM
    PDBbind: -logKd/Ki=7.68, Kd=0.021uM
    11298 2yln:A (1.12) BS02 CYS ? N/A Q5F9M1 22138345 MOAD: Kd=0.021uM
    PDBbind: -logKd/Ki=7.68, Kd=0.021uM
    11299 2ylo:A (2.5) BS01 TES ? N/A P10275 22047606 BindingDB: IC50=2.7nM, Ki=3.2nM, EC50=1.1nM
    11300 2ylo:A (2.5) BS02 YLO ? N/A P10275 22047606 PDBbind: -logKd/Ki=4.88, IC50=13.1uM
    BindingDB: IC50=13100nM
    11301 2ylp:A (2.3) BS01 TES ? N/A P10275 22047606 BindingDB: IC50=2.7nM, Ki=3.2nM, EC50=1.1nM
    11302 2ylp:A (2.3) BS02 056 ? N/A P10275 22047606 PDBbind: -logKd/Ki=4.30, IC50~50uM
    11303 2ylp:A (2.3) BS03 056 ? N/A P10275 22047606 PDBbind: -logKd/Ki=4.30, IC50~50uM
    11304 2ylq:A (2.4) BS01 TES ? N/A P10275 22047606 BindingDB: IC50=2.7nM, Ki=3.2nM, EC50=1.1nM
    11305 2ylq:A (2.4) BS02 YLQ ? N/A P10275 22047606 PDBbind: -logKd/Ki=4.30, IC50~50uM
    BindingDB: IC50=>10000nM
    11306 2yly:A (3.2) BS01 SU4 ? GO:0003677 ... Q92731 21885279 BindingDB: EC50=101nM
    11307 2yly:B (3.2) BS01 SU4 ? GO:0003677 ... Q92731 21885279 BindingDB: EC50=101nM
    11308 2ym3:A (2.007) BS01 YM3 2.7.11.1 GO:0000077 ... O14757 22111927 MOAD: ic50=1.2uM
    PDBbind: -logKd/Ki=6.00, IC50=1.0uM
    BindingDB: IC50=1200nM
    11309 2ym4:A (2.35) BS01 4YM 2.7.11.1 GO:0000077 ... O14757 22111927 MOAD: ic50=1.5uM
    PDBbind: -logKd/Ki=5.82, IC50=1.5uM
    BindingDB: IC50=1500nM
    11310 2ym5:A (2.03) BS01 YM5 2.7.11.1 GO:0000077 ... O14757 22111927 MOAD: ic50=0.43uM
    PDBbind: -logKd/Ki=6.37, IC50=0.43uM
    BindingDB: IC50=430nM
    11311 2ym6:A (2.01) BS01 YM6 2.7.11.1 GO:0000077 ... O14757 22111927 MOAD: ic50=0.88uM
    PDBbind: -logKd/Ki=6.06, IC50=0.88uM
    BindingDB: IC50=880nM
    11312 2ym7:A (1.81) BS01 YM7 2.7.11.1 GO:0000077 ... O14757 22111927 MOAD: ic50=0.13uM
    PDBbind: -logKd/Ki=6.89, IC50=0.13uM
    BindingDB: IC50=130nM
    11313 2ym7:A (1.81) BS02 YM7 2.7.11.1 GO:0000077 ... O14757 22111927 MOAD: ic50=0.13uM
    PDBbind: -logKd/Ki=6.89, IC50=0.13uM
    BindingDB: IC50=130nM
    11314 2ym8:A (2.07) BS01 YM8 2.7.11.1 GO:0000077 ... O14757 22111927 MOAD: ic50=0.013uM
    PDBbind: -logKd/Ki=7.89, IC50=13nM
    BindingDB: IC50=13nM
    11315 2ymd:A (1.96) BS01 SRO ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=693uM
    PDBbind: -logKd/Ki=3.16, Kd=693uM
    11316 2ymd:A (1.96) BS02 SRO ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=693uM
    PDBbind: -logKd/Ki=3.16, Kd=693uM
    11317 2ymd:B (1.96) BS01 SRO ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=693uM
    PDBbind: -logKd/Ki=3.16, Kd=693uM
    11318 2ymd:B (1.96) BS02 SRO ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=693uM
    PDBbind: -logKd/Ki=3.16, Kd=693uM
    11319 2ymd:C (1.96) BS01 SRO ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=693uM
    11320 2ymd:C (1.96) BS02 SRO ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=693uM
    11321 2ymd:D (1.96) BS01 SRO ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=693uM
    11322 2ymd:D (1.96) BS02 SRO ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=693uM
    11323 2ymd:E (1.96) BS01 SRO ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=693uM
    11324 2ymd:E (1.96) BS02 SRO ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=693uM
    11325 2ymd:F (1.96) BS01 SRO ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=693uM
    11326 2ymd:F (1.96) BS02 SRO ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=693uM
    11327 2ymd:G (1.96) BS01 SRO ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=693uM
    11328 2ymd:G (1.96) BS02 SRO ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=693uM
    11329 2ymd:H (1.96) BS01 SRO ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=693uM
    11330 2ymd:H (1.96) BS02 SRO ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=693uM
    11331 2ymd:I (1.96) BS01 SRO ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=693uM
    11332 2ymd:I (1.96) BS02 SRO ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=693uM
    11333 2ymd:J (1.96) BS01 SRO ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=693uM
    11334 2ymd:J (1.96) BS02 SRO ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=693uM
    11335 2yme:A (2.4) BS01 CWB ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=343uM
    11336 2yme:A (2.4) BS02 CWB ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=343uM
    11337 2yme:B (2.4) BS01 CWB ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=343uM
    11338 2yme:B (2.4) BS02 CWB ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=343uM
    11339 2yme:C (2.4) BS01 CWB ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=343uM
    11340 2yme:C (2.4) BS02 CWB ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=343uM
    11341 2yme:D (2.4) BS01 CWB ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=343uM
    11342 2yme:D (2.4) BS02 CWB ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=343uM
    11343 2yme:E (2.4) BS01 CWB ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=343uM
    11344 2yme:E (2.4) BS02 CWB ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=343uM
    11345 2yme:F (2.4) BS01 CWB ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=343uM
    PDBbind: -logKd/Ki=7.66, Kd=22nM
    11346 2yme:G (2.4) BS01 CWB ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=343uM
    PDBbind: -logKd/Ki=7.66, Kd=22nM
    11347 2yme:G (2.4) BS02 CWB ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=343uM
    PDBbind: -logKd/Ki=7.66, Kd=22nM
    11348 2yme:H (2.4) BS01 CWB ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=343uM
    11349 2yme:H (2.4) BS02 CWB ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=343uM
    11350 2yme:I (2.4) BS01 CWB ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=343uM
    11351 2yme:I (2.4) BS02 CWB ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=343uM
    11352 2yme:J (2.4) BS01 CWB ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=343uM
    11353 2yme:J (2.4) BS02 CWB ? GO:0004888 ... Q8WSF8 23196367 MOAD: Kd=343uM
    11354 2ynd:A (1.89) BS02 646 2.3.1.97 GO:0004379 ... A5K1A2 24451586 MOAD: Ki=32nM
    PDBbind: -logKd/Ki=7.49, Ki=32nM
    11355 2ynd:B (1.89) BS02 646 2.3.1.97 GO:0004379 ... A5K1A2 24451586 MOAD: Ki=32nM
    11356 2ynd:C (1.89) BS02 646 2.3.1.97 GO:0004379 ... A5K1A2 24451586 MOAD: Ki=32nM
    11357 2yne:A (1.72) BS02 YNE 2.3.1.97 GO:0004379 ... A5K1A2 24451586 MOAD: Ki=2.7nM
    PDBbind: -logKd/Ki=8.57, Ki=2.7nM
    11358 2yne:B (1.72) BS02 YNE 2.3.1.97 GO:0004379 ... A5K1A2 24451586 MOAD: Ki=2.7nM
    11359 2yne:C (1.72) BS02 YNE 2.3.1.97 GO:0004379 ... A5K1A2 24451586 MOAD: Ki=2.7nM
    11360 2yof:A (1.82) BS01 74W 2.7.4.8
    2.7.4.9    		 GO:0004385 ... Q8I4S1 23240776 MOAD: Ki=25uM
    PDBbind: -logKd/Ki=4.60, Ki=25uM
    BindingDB: Ki=25000nM
    11361 2yof:B (1.82) BS01 74W 2.7.4.8
    2.7.4.9    		 GO:0004385 ... Q8I4S1 23240776 MOAD: Ki=25uM
    BindingDB: Ki=25000nM
    11362 2yof:C (1.82) BS01 74W 2.7.4.8
    2.7.4.9    		 GO:0004385 ... Q8I4S1 23240776 MOAD: Ki=25uM
    BindingDB: Ki=25000nM
    11363 2yog:A (1.5) BS01 74X 2.7.4.8
    2.7.4.9    		 GO:0004385 ... Q8I4S1 23240776 MOAD: Ki=31uM
    PDBbind: -logKd/Ki=4.51, Ki=31uM
    BindingDB: Ki=31000nM
    11364 2yog:B (1.5) BS01 74X 2.7.4.8
    2.7.4.9    		 GO:0004385 ... Q8I4S1 23240776 MOAD: Ki=31uM
    BindingDB: Ki=31000nM
    11365 2yoh:A (1.6) BS01 WMJ 2.7.4.8
    2.7.4.9    		 GO:0004385 ... Q8I4S1 23240776 MOAD: Ki=11uM
    PDBbind: -logKd/Ki=4.96, Ki=11uM
    BindingDB: Ki=11000nM
    11366 2yoh:B (1.6) BS01 WMJ 2.7.4.8
    2.7.4.9    		 GO:0004385 ... Q8I4S1 23240776 MOAD: Ki=11uM
    BindingDB: Ki=11000nM
    11367 2yoj:A (1.76) BS01 8Y6 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 24900812 MOAD: ic50=5nM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    11368 2yoj:B (1.76) BS01 8Y6 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 24900812 MOAD: ic50=5nM
    11369 2yol:A (3.2) BS01 EBN 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P06935 23307694 PDBbind: -logKd/Ki=6.89, Ki=0.13uM
    BindingDB: Ki=130nM
    11370 2yoo:A (1.69) BS02 K2B 1.14.15.28 GO:0004497 ... A0R4Q6 23489718 MOAD: Kd=0.52uM
    11371 2yoo:B (1.69) BS02 K2B 1.14.15.28 GO:0004497 ... A0R4Q6 23489718 MOAD: Kd=0.52uM
    11372 2yoo:C (1.69) BS02 K2B 1.14.15.28 GO:0004497 ... A0R4Q6 23489718 MOAD: Kd=0.52uM
    11373 2yoo:D (1.69) BS02 K2B 1.14.15.28 GO:0004497 ... A0R4Q6 23489718 MOAD: Kd=0.52uM
    11374 2ypf:A (2.55) BS01 dna ? N/A Q3ZD73 23999294 PDBbind: Kd=78nM
    11375 2ypi:A (2.5) BS01 PGA 5.3.1.1 GO:0004807 ... P00942 2204418 MOAD: Ki=15uM
    PDBbind: -logKd/Ki=4.82, Ki=15uM
    11376 2ypi:B (2.5) BS01 PGA 5.3.1.1 GO:0004807 ... P00942 2204418 MOAD: Ki=15uM
    PDBbind: -logKd/Ki=4.82, Ki=15uM
    11377 2ypo:A (2.0) BS02 PHE 2.5.1.54 GO:0003849 ... O53512 23274137 MOAD: Kd=21uM
    PDBbind: -logKd/Ki=4.68, Kd=21uM
    11378 2ypo:B (2.0) BS01 PHE 2.5.1.54 GO:0003849 ... O53512 23274137 MOAD: Kd=21uM
    PDBbind: -logKd/Ki=4.68, Kd=21uM
    11379 2ypo:B (2.0) BS03 PHE 2.5.1.54 GO:0003849 ... O53512 23274137 MOAD: Kd=21uM
    PDBbind: -logKd/Ki=4.68, Kd=21uM
    11380 2ypp:A (2.3) BS01 TYR 2.5.1.54 GO:0003849 ... O53512 23274137 MOAD: Kd=39uM
    PDBbind: -logKd/Ki=4.41, Kd=39uM
    11381 2ypp:A (2.3) BS03 TYR 2.5.1.54 GO:0003849 ... O53512 23274137 MOAD: Kd=39uM
    PDBbind: -logKd/Ki=4.41, Kd=39uM
    11382 2ypp:B (2.3) BS01 TYR 2.5.1.54 GO:0003849 ... O53512 23274137 MOAD: Kd=39uM
    PDBbind: -logKd/Ki=4.41, Kd=39uM
    11383 2ypp:B (2.3) BS03 TYR 2.5.1.54 GO:0003849 ... O53512 23274137 MOAD: Kd=39uM
    PDBbind: -logKd/Ki=4.41, Kd=39uM
    11384 2ypp:B (2.3) BS04 TYR 2.5.1.54 GO:0003849 ... O53512 23274137 MOAD: Kd=39uM
    PDBbind: -logKd/Ki=4.41, Kd=39uM
    11385 2yr6:A (1.35) BS02 BE2 1.13.12.9 GO:0000166 ... Q5W9R9 18417467 MOAD: Ki=0.87mM
    11386 2yr6:B (1.35) BS02 BE2 1.13.12.9 GO:0000166 ... Q5W9R9 18417467 MOAD: Ki=0.87mM
    11387 2ywp:A (2.9) BS01 A42 2.7.11.1 GO:0000077 ... O14757 16446090 PDBbind: -logKd/Ki=8.15, IC50=7nM
    BindingDB: IC50=7nM
    11388 2yxj:A (2.2) BS01 N3C ? GO:0042981 ... Q07817 17572662 MOAD: ic50=9nM
    PDBbind: -logKd/Ki=9.30, Ki=0.5nM
    BindingDB: Ki=<1.000000nM, IC50=6nM, Kd=0.37nM, EC50=30nM
    11389 2yxj:B (2.2) BS01 N3C ? GO:0042981 ... Q07817 17572662 MOAD: ic50=9nM
    BindingDB: Ki=<1.000000nM, IC50=6nM, Kd=0.37nM, EC50=30nM
    11390 2yz3:A (2.3) BS03 M5P 3.5.2.6 N/A Q7BJM5 18052313 MOAD: Ki=220nM
    PDBbind: -logKd/Ki=6.66, Ki=220nM
    11391 2yz3:B (2.3) BS03 M5P 3.5.2.6 N/A Q7BJM5 18052313 MOAD: Ki=220nM
    11392 2z1w:A (1.63) BS02 BDI 2.4.2.29 GO:0002099 ... P28720 17949745 PDBbind: -logKd/Ki=4.08, Ki=83uM
    11393 2z2d:A (-1.00) BS06 HSI 3.4.24.65 GO:0004222 ... P39900 N/A BindingDB: IC50=200nM
    11394 2z3h:A (1.5) BS02 BLO 3.5.4.23 GO:0003824 ... P0C2P0 17959604 PDBbind: -logKd/Ki=4.64, Ki=23uM
    11395 2z3h:B (1.5) BS01 BLO 3.5.4.23 GO:0003824 ... P0C2P0 17959604 PDBbind: -logKd/Ki=4.64, Ki=23uM
    11396 2z3h:B (1.5) BS03 BLO 3.5.4.23 GO:0003824 ... P0C2P0 17959604 PDBbind: -logKd/Ki=4.64, Ki=23uM
    11397 2z3h:C (1.5) BS02 BLO 3.5.4.23 GO:0003824 ... P0C2P0 17959604 PDBbind: -logKd/Ki=4.64, Ki=23uM
    11398 2z3h:D (1.5) BS02 BLO 3.5.4.23 GO:0003824 ... P0C2P0 17959604 PDBbind: -logKd/Ki=4.64, Ki=23uM
    11399 2z3z:A (1.95) BS01 AIO 3.4.14.12 GO:0004177 ... Q7MUW6 18042490 PDBbind: -logKd/Ki=4.31, Ki=48.8uM
    11400 2z4b:A (2.34) BS01 DC8 ? GO:0003677 ... Q92731 17614275 MOAD: Ki=0.44nM
    PDBbind: -logKd/Ki=9.36, Ki=0.44nM
    BindingDB: Ki=0.44nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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