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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    9201 2q72:A (1.7) BS04 IXX ? GO:0005886 ... O67854 17687333 MOAD: ic50=2090uM
    PDBbind: -logKd/Ki=2.68, IC50=2.09mM
    9202 2q72:A (1.7) BS05 IXX ? GO:0005886 ... O67854 17687333 MOAD: ic50=2090uM
    PDBbind: -logKd/Ki=2.68, IC50=2.09mM
    9203 2q7i:A (1.87) BS02 TES ? N/A P10275 17591767 BindingDB: IC50=2.7nM, Ki=3.2nM, EC50=1.1nM
    9204 2q7j:A (1.9) BS02 TES ? N/A P10275 17591767 BindingDB: IC50=2.7nM, Ki=3.2nM, EC50=1.1nM
    9205 2q7k:A (1.8) BS02 TES ? N/A P10275 17591767 BindingDB: IC50=2.7nM, Ki=3.2nM, EC50=1.1nM
    9206 2q7l:A (1.92) BS02 TES ? N/A P10275 17591767 BindingDB: IC50=2.7nM, Ki=3.2nM, EC50=1.1nM
    9207 2q7m:A (4.25) BS01 2CS ? GO:0002540 ... P20292 17600184 BindingDB: IC50=2nM
    9208 2q7m:A (4.25) BS02 2CS ? GO:0002540 ... P20292 17600184 BindingDB: IC50=2nM
    9209 2q7m:B (4.25) BS01 2CS ? GO:0002540 ... P20292 17600184 PDBbind: -logKd/Ki=8.80, IC50=1.6nM
    BindingDB: IC50=2nM
    9210 2q7m:B (4.25) BS02 2CS ? GO:0002540 ... P20292 17600184 PDBbind: -logKd/Ki=8.80, IC50=1.6nM
    BindingDB: IC50=2nM
    9211 2q7m:C (4.25) BS01 2CS ? GO:0002540 ... P20292 17600184 PDBbind: -logKd/Ki=8.80, IC50=1.6nM
    BindingDB: IC50=2nM
    9212 2q7m:C (4.25) BS02 2CS ? GO:0002540 ... P20292 17600184 PDBbind: -logKd/Ki=8.80, IC50=1.6nM
    BindingDB: IC50=2nM
    9213 2q7m:D (4.25) BS01 2CS ? GO:0002540 ... P20292 17600184 BindingDB: IC50=2nM
    9214 2q7m:D (4.25) BS02 2CS ? GO:0002540 ... P20292 17600184 BindingDB: IC50=2nM
    9215 2q7m:E (4.25) BS01 2CS ? GO:0002540 ... P20292 17600184 BindingDB: IC50=2nM
    9216 2q7m:E (4.25) BS02 2CS ? GO:0002540 ... P20292 17600184 BindingDB: IC50=2nM
    9217 2q7m:F (4.25) BS01 2CS ? GO:0002540 ... P20292 17600184 BindingDB: IC50=2nM
    9218 2q7m:F (4.25) BS02 2CS ? GO:0002540 ... P20292 17600184 BindingDB: IC50=2nM
    9219 2q7o:E (2.9) BS01 IMH 2.4.2.1 GO:0000255 ... P00491 18154341 PDBbind: -logKd/Ki=7.92, Ki=12nM
    9220 2q7q:D (1.6) BS01 C2B 1.4.9.2 GO:0009308 ... P84887 17636875 MOAD: Kd<5uM
    9221 2q7q:H (1.6) BS01 C2B 1.4.9.2 GO:0009308 ... P84887 17636875 MOAD: Kd<5uM
    9222 2q7y:A (1.95) BS01 IGC ? N/A P11609 18295796 PDBbind: -logKd/Ki=4.30, Kd=50uM
    9223 2q80:A (2.7) BS03 GRG 2.5.1.-
    2.5.1.1
    2.5.1.10
    2.5.1.29    		 GO:0004161 ... O95749 16698791 PDBbind: -logKd/Ki=4.60, Ki=25uM
    9224 2q80:B (2.7) BS03 GRG 2.5.1.-
    2.5.1.1
    2.5.1.10
    2.5.1.29    		 GO:0004161 ... O95749 16698791 PDBbind: -logKd/Ki=4.60, Ki=25uM
    9225 2q85:A (2.51) BS01 973 1.3.1.98 GO:0005737 ... P08373 N/A BindingDB: IC50=28600nM
    9226 2q88:A (1.9) BS01 4CS ? GO:0033294 ... Q92WC8 17996893 MOAD: Kd=1.6uM
    PDBbind: -logKd/Ki=5.80, Kd=1.6uM
    9227 2q89:A (2.3) BS01 6CS ? GO:0033294 ... Q92WC8 17996893 MOAD: Kd=0.5uM
    PDBbind: -logKd/Ki=6.30, Kd=0.5uM
    9228 2q8g:A (1.9) BS01 AZX 2.7.11.2 GO:0004672 ... Q15118 17683942 MOAD: ic50=0.087uM
    PDBbind: -logKd/Ki=7.06, IC50=87nM
    BindingDB: IC50=41nM
    9229 2q8h:A (2.0) BS01 TF4 2.7.11.2 GO:0004672 ... Q15118 17683942 MOAD: Ki=1mM
    PDBbind: -logKd/Ki=3.00, Kd=1mM
    BindingDB: IC50=5100000nM
    9230 2q8i:A (2.6) BS01 RDC 2.7.11.2 GO:0004672 ... Q15120 17683942 PDBbind: -logKd/Ki=3.40, IC50=400uM
    9231 2q8m:A (2.05) BS01 BG6 3.1.3.11 GO:0000166 ... P0A993 17567577 MOAD: Ki~700uM
    9232 2q8m:A (2.05) BS02 FBP 3.1.3.11 GO:0000166 ... P0A993 17567577 MOAD: ic50=6uM
    9233 2q8m:A (2.05) BS05 AMP 3.1.3.11 GO:0000166 ... P0A993 17567577 MOAD: Ki=94uM
    PDBbind: -logKd/Ki=4.03, Ki=94uM
    9234 2q8m:B (2.05) BS01 FBP 3.1.3.11 GO:0000166 ... P0A993 17567577 MOAD: ic50=6uM
    9235 2q8m:B (2.05) BS04 AMP 3.1.3.11 GO:0000166 ... P0A993 17567577 MOAD: Ki=94uM
    9236 2q8s:A (2.3) BS01 L92 ? GO:0003677 ... P37231 18394907 MOAD: ic50=0.185uM
    PDBbind: -logKd/Ki=6.73, IC50=0.185uM
    BindingDB: EC50=140nM, IC50=185nM
    9237 2q8z:A (1.8) BS01 NUP 4.1.1.23 GO:0004590 ... Q8IJH3 18189347 MOAD: Ki=2.1uM
    PDBbind: -logKd/Ki=5.68, Ki=2.1uM
    9238 2q8z:A (1.8) BS02 NUP 4.1.1.23 GO:0004590 ... Q8IJH3 18189347 MOAD: Ki=2.1uM
    PDBbind: -logKd/Ki=5.68, Ki=2.1uM
    9239 2q8z:B (1.8) BS01 NUP 4.1.1.23 GO:0004590 ... Q8IJH3 18189347 MOAD: Ki=2.1uM
    PDBbind: -logKd/Ki=5.68, Ki=2.1uM
    9240 2q8z:B (1.8) BS02 NUP 4.1.1.23 GO:0004590 ... Q8IJH3 18189347 MOAD: Ki=2.1uM
    PDBbind: -logKd/Ki=5.68, Ki=2.1uM
    9241 2q92:A (1.9) BS03 B23 3.4.11.18 GO:0004177 ... P0AE18 18093325 MOAD: ic50=1.1uM
    PDBbind: -logKd/Ki=5.96, IC50=1.1uM
    BindingDB: IC50=1080nM
    9242 2q93:A (1.6) BS03 B21 3.4.11.18 GO:0004177 ... P0AE18 18093325 MOAD: ic50=0.56uM
    PDBbind: -logKd/Ki=6.25, IC50=0.56uM
    BindingDB: IC50=>200000nM
    9243 2q94:A (1.63) BS03 A04 3.4.11.18 GO:0004177 ... P0AE18 18093325 MOAD: ic50=0.37uM
    PDBbind: -logKd/Ki=6.43, IC50=0.37uM
    BindingDB: IC50=197000nM
    9244 2q95:A (1.7) BS03 A05 3.4.11.18 GO:0004177 ... P0AE18 18093325 MOAD: ic50=1.6uM
    PDBbind: -logKd/Ki=5.80, IC50=1.6uM
    BindingDB: IC50=48600nM
    9245 2q96:A (1.6) BS03 A18 3.4.11.18 GO:0004177 ... P0AE18 18093325 MOAD: ic50=1.2uM
    PDBbind: -logKd/Ki=5.92, IC50=1.2uM
    BindingDB: IC50=158000nM
    9246 2q9f:A (1.9) BS02 C3S 1.14.14.25 GO:0004497 ... Q9Y6A2 18621681 MOAD: Kd=7nM
    9247 2q9m:A (2.05) BS01 LK7 3.5.2.6 GO:0008800 ... P05364 17665896 PDBbind: -logKd/Ki=7.21, IC50=62nM
    9248 2q9n:A (2.2) BS01 LK5 3.5.2.6 GO:0008800 ... P05364 17665896 PDBbind: -logKd/Ki=6.37, IC50=430nM
    9249 2q9y:B (2.85) BS03 BTM 4.2.3.6 GO:0016106 ... P13513 17678871 PDBbind: -logKd/Ki=4.44, Ki=36uM
    9250 2qa6:A (2.6) BS02 KN2 ? N/A P03372 18344977 BindingDB: IC50=48nM, EC50=298nM
    9251 2qa6:B (2.6) BS02 KN2 ? N/A P03372 18344977 BindingDB: IC50=48nM, EC50=298nM
    9252 2qa8:A (1.85) BS02 GEN ? N/A P03372 18344977 PDBbind: -logKd/Ki=6.00, IC50=0.99uM
    BindingDB: IC50=395nM, EC50=240nM, Ki=370nM
    9253 2qa8:B (1.85) BS02 GEN ? N/A P03372 18344977 BindingDB: IC50=395nM, EC50=240nM, Ki=370nM
    9254 2qbp:A (2.5) BS01 527 3.1.3.48 GO:0004725 ... P18031 17705360 MOAD: Ki=0.004uM
    PDBbind: -logKd/Ki=8.40, Ki=0.004uM
    BindingDB: Ki=4nM
    9255 2qbq:A (2.1) BS01 4B3 3.1.3.48 GO:0004725 ... P18031 17705360 MOAD: Ki=0.036uM
    PDBbind: -logKd/Ki=7.44, Ki=0.036uM
    BindingDB: Ki=36nM
    9256 2qbr:A (2.3) BS01 910 3.1.3.48 GO:0004725 ... P18031 17705360 MOAD: Ki=0.47uM
    PDBbind: -logKd/Ki=6.33, Ki=0.47uM
    BindingDB: Ki=470nM
    9257 2qbs:A (2.1) BS01 024 3.1.3.48 GO:0004725 ... P18031 17705360 MOAD: Ki=0.21uM
    PDBbind: -logKd/Ki=6.68, Ki=0.21uM
    BindingDB: Ki=210nM
    9258 2qbu:A (2.1) BS01 SAH ? GO:0008168 ... O27402 17567575 PDBbind: -logKd/Ki=6.19, Kd=0.645uM
    9259 2qbu:B (2.1) BS01 SAH ? GO:0008168 ... O27402 17567575 MOAD: Kd=0.645uM
    PDBbind: -logKd/Ki=6.19, Kd=0.645uM
    9260 2qc6:A (1.85) BS01 G12 2.7.11.1 GO:0004672 ... P28523 18251491 MOAD: ic50=0.1uM
    PDBbind: -logKd/Ki=7.00, IC50=0.1uM
    9261 2qcd:A (2.03) BS01 U5P 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 18184586 PDBbind: -logKd/Ki=3.40, IC50=400uM
    9262 2qcd:A (2.03) BS02 U5P 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 18184586 PDBbind: -logKd/Ki=3.40, IC50=400uM
    9263 2qcd:B (2.03) BS01 U5P 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 18184586 PDBbind: -logKd/Ki=3.40, IC50=400uM
    9264 2qcd:B (2.03) BS02 U5P 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 18184586 PDBbind: -logKd/Ki=3.40, IC50=400uM
    9265 2qcf:A (1.22) BS01 5FU 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 18184586 PDBbind: -logKd/Ki=3.49, IC50=320uM
    BindingDB: Ki=98000nM
    9266 2qcg:A (1.75) BS01 5BU 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 18184586 PDBbind: -logKd/Ki=4.00, IC50=100uM
    9267 2qcg:A (1.75) BS02 5BU 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 18184586 PDBbind: -logKd/Ki=4.00, IC50=100uM
    9268 2qcg:B (1.75) BS01 5BU 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 18184586 PDBbind: -logKd/Ki=4.00, IC50=100uM
    9269 2qcg:B (1.75) BS02 5BU 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 18184586 PDBbind: -logKd/Ki=4.00, IC50=100uM
    9270 2qch:A (1.95) BS02 5IU 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 18184586 PDBbind: -logKd/Ki=3.60, IC50=250uM
    9271 2qch:A (1.95) BS04 5IU 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 18184586 PDBbind: -logKd/Ki=3.60, IC50=250uM
    9272 2qch:B (1.95) BS01 5IU 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 18184586 PDBbind: -logKd/Ki=3.60, IC50=250uM
    9273 2qch:B (1.95) BS04 5IU 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 18184586 PDBbind: -logKd/Ki=3.60, IC50=250uM
    9274 2qci:A (1.2) BS01 065 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 17696515 PDBbind: -logKd/Ki=8.34, Ki=4.6nM
    9275 2qci:B (1.2) BS01 065 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 17696515 MOAD: Ki=4.6nM
    PDBbind: -logKd/Ki=8.34, Ki=4.6nM
    9276 2qcm:A (1.67) BS01 JW5 2.4.2.10
    4.1.1.23    		 GO:0004590 ... P11172 18184586 PDBbind: -logKd/Ki=3.35, IC50=450uM
    9277 2qd6:A (1.28) BS01 065 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 17696515 PDBbind: -logKd/Ki=8.68, Ki=2.1nM
    9278 2qd6:B (1.28) BS01 065 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 17696515 MOAD: Ki=2.1nM
    PDBbind: -logKd/Ki=8.68, Ki=2.1nM
    9279 2qd7:A (1.11) BS01 065 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 17696515 PDBbind: -logKd/Ki=9.10, Ki=0.80nM
    9280 2qd7:B (1.11) BS01 065 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 17696515 MOAD: Ki=0.8nM
    PDBbind: -logKd/Ki=9.10, Ki=0.80nM
    9281 2qd8:A (1.35) BS01 065 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 17696515 PDBbind: -logKd/Ki=9.07, Ki=0.85nM
    9282 2qd8:B (1.35) BS01 065 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 17696515 MOAD: Ki=0.85nM
    PDBbind: -logKd/Ki=9.07, Ki=0.85nM
    9283 2qd9:A (1.7) BS01 LGF 2.7.11.24 GO:0000077 ... Q16539 17664068 MOAD: ic50=13nM
    PDBbind: -logKd/Ki=7.89, IC50=13nM
    BindingDB: IC50=13nM
    9284 2qds:A (1.66) BS02 MCO 3.5.2.6 GO:0008270 ... P26918 18563261 MOAD: Ki=72uM
    9285 2qdt:A (2.0) BS03 I38 3.5.2.6 GO:0008270 ... P52700 18563261 MOAD: Ki=6.5uM
    PDBbind: -logKd/Ki=5.19, Ki=6.5uM
    9286 2qe2:A (2.9) BS01 452 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... Q99AU2 17402724 PDBbind: -logKd/Ki=7.77, IC50=17nM
    9287 2qe4:A (2.4) BS01 JJ3 ? N/A P03372 17662603 MOAD: Ki=11nM
    PDBbind: -logKd/Ki=7.96, Ki=11.0nM
    BindingDB: Ki=11nM
    9288 2qe4:B (2.4) BS01 JJ3 ? N/A P03372 17662603 MOAD: Ki=11nM
    BindingDB: Ki=11nM
    9289 2qe5:A (2.6) BS01 617 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... Q99AU2 17402724 PDBbind: -logKd/Ki=5.79, IC50=1.64uM
    9290 2qeh:A (2.102) BS01 SRO ? GO:0005549 ... Q7PNF2 17928288 MOAD: Kd=2.4nM
    9291 2qei:A (1.85) BS04 CXX ? GO:0005886 ... O67854 17687333 MOAD: ic50~5uM
    9292 2qei:A (1.85) BS05 CXX ? GO:0005886 ... O67854 17687333 MOAD: ic50~5uM
    9293 2qf6:A (3.1) BS01 A56 3.6.4.10 GO:0005524 ... P07900 17630989 PDBbind: -logKd/Ki=6.49, Ki=0.32uM
    BindingDB: Ki=3.2e+2nM, Kd=<1.0e+4nM
    9294 2qf6:B (3.1) BS01 A56 3.6.4.10 GO:0005524 ... P07900 17630989 BindingDB: Ki=3.2e+2nM, Kd=<1.0e+4nM
    9295 2qf6:C (3.1) BS01 A56 3.6.4.10 GO:0005524 ... P07900 17630989 BindingDB: Ki=3.2e+2nM, Kd=<1.0e+4nM
    9296 2qf6:D (3.1) BS01 A56 3.6.4.10 GO:0005524 ... P07900 17630989 BindingDB: Ki=3.2e+2nM, Kd=<1.0e+4nM
    9297 2qfo:A (1.68) BS01 A13 3.6.4.10 GO:0005524 ... P07900 17630989 MOAD: Kd=20uM
    PDBbind: -logKd/Ki=4.70, Kd=20uM
    BindingDB: Ki=1.8e+4nM, Kd=2.0e+4nM
    9298 2qfo:A (1.68) BS02 A51 3.6.4.10 GO:0005524 ... P07900 17630989 MOAD: Kd=150uM
    9299 2qfq:A (1.5) BS01 S3P 2.5.1.19 GO:0003824 ... P0A6D3 17855366 MOAD: ic50=66uM
    BindingDB: Kd=7000nM
    9300 2qfs:A (1.55) BS01 S3P 2.5.1.19 GO:0003824 ... P0A6D3 17855366 MOAD: Ki=5.5uM
    BindingDB: Kd=7000nM
    9301 2qft:A (1.55) BS01 GPJ 2.5.1.19 GO:0003824 ... P0A6D3 17855366 PDBbind: -logKd/Ki=5.26, Ki=5.5uM
    9302 2qft:A (1.55) BS02 S3P 2.5.1.19 GO:0003824 ... P0A6D3 17855366 MOAD: Ki=5.5uM
    BindingDB: Kd=7000nM
    9303 2qfu:A (1.6) BS01 GPJ 2.5.1.19 GO:0003824 ... P0A6D3 17855366 PDBbind: -logKd/Ki=4.18, Ki=66uM
    9304 2qfu:A (1.6) BS02 S3P 2.5.1.19 GO:0003824 ... P0A6D3 17855366 MOAD: Ki=66uM
    BindingDB: Kd=7000nM
    9305 2qg0:A (1.85) BS01 A94 3.6.4.10 GO:0005524 ... P07900 17630989 MOAD: Ki=1.9uM
    PDBbind: -logKd/Ki=5.72, Ki=1.9uM
    9306 2qg0:B (1.85) BS01 A94 3.6.4.10 GO:0005524 ... P07900 17630989 MOAD: Ki=1.9uM
    PDBbind: -logKd/Ki=5.72, Ki=1.9uM
    9307 2qg2:A (1.8) BS01 A91 3.6.4.10 GO:0005524 ... P07900 17630989 MOAD: Ki=4uM
    PDBbind: -logKd/Ki=5.40, Ki=4.0uM
    9308 2qh6:A (2.7) BS02 ODE ? N/A P03372 18344977 PDBbind: -logKd/Ki=6.00, IC50=1uM
    9309 2qhc:A (2.802) BS01 AB1 3.4.23.16 GO:0004190 ... Q9J2P7 18560011 PDBbind: -logKd/Ki=8.96, Ki=1.1nM
    9310 2qhc:B (2.802) BS01 AB1 3.4.23.16 GO:0004190 ... Q9J2P7 18560011 PDBbind: -logKd/Ki=8.96, Ki=1.1nM
    9311 2qhd:A (1.95) BS01 DAO 3.1.1.4 GO:0004623 ... P48650 18586854 PDBbind: -logKd/Ki=5.38, Kd=4.2uM
    9312 2qhd:B (1.95) BS01 DAO 3.1.1.4 GO:0004623 ... P48650 18586854 PDBbind: -logKd/Ki=5.38, Kd=4.2uM
    9313 2qhm:A (2.0) BS01 7CS 2.7.11.1 GO:0000077 ... O14757 17804227 MOAD: ic50=660nM
    PDBbind: -logKd/Ki=6.18, Kd=660nM
    9314 2qhn:A (1.7) BS01 582 2.7.11.1 GO:0000077 ... O14757 17804227 MOAD: ic50=980nM
    PDBbind: -logKd/Ki=6.01, IC50=980nM
    9315 2qhx:A (2.61) BS02 FE1 1.5.1.33 GO:0004155 ... Q01782 18245389 BindingDB: Ki=37nM
    9316 2qhx:B (2.61) BS02 FE1 1.5.1.33 GO:0004155 ... Q01782 18245389 BindingDB: Ki=37nM
    9317 2qhx:C (2.61) BS02 FE1 1.5.1.33 GO:0004155 ... Q01782 18245389 BindingDB: Ki=37nM
    9318 2qhx:D (2.61) BS02 FE1 1.5.1.33 GO:0004155 ... Q01782 18245389 BindingDB: Ki=37nM
    9319 2qhy:A (1.85) BS01 MZ1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 MOAD: Ki=33nM
    PDBbind: -logKd/Ki=7.48, Ki=33nM
    9320 2qhy:B (1.85) BS01 MZ1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 PDBbind: -logKd/Ki=7.48, Ki=33nM
    9321 2qhz:A (1.85) BS01 MZ2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 MOAD: Ki=53nM
    PDBbind: -logKd/Ki=7.28, Ki=53nM
    9322 2qhz:B (1.85) BS01 MZ2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 PDBbind: -logKd/Ki=7.28, Ki=53nM
    9323 2qi0:A (2.1) BS01 MZ3 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 PDBbind: -logKd/Ki=7.38, Ki=42nM
    9324 2qi0:B (2.1) BS01 MZ3 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 MOAD: Ki=42nM
    PDBbind: -logKd/Ki=7.38, Ki=42nM
    9325 2qi1:A (2.0) BS01 MZ4 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 MOAD: Ki=50nM
    PDBbind: -logKd/Ki=7.30, Ki=50nM
    9326 2qi1:B (2.0) BS01 MZ4 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 PDBbind: -logKd/Ki=7.30, Ki=50nM
    9327 2qi3:A (1.95) BS01 MZ5 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 PDBbind: -logKd/Ki=10.20, Ki=0.063nM
    9328 2qi3:B (1.95) BS01 MZ5 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 MOAD: Ki=0.063nM
    PDBbind: -logKd/Ki=10.20, Ki=0.063nM
    9329 2qi4:A (1.8) BS01 MZ6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 MOAD: Ki=0.036nM
    PDBbind: -logKd/Ki=10.44, Ki=0.036nM
    9330 2qi4:B (1.8) BS01 MZ6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 PDBbind: -logKd/Ki=10.44, Ki=0.036nM
    9331 2qi5:A (1.85) BS01 MZ7 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 PDBbind: -logKd/Ki=10.85, Ki=0.014nM
    9332 2qi5:B (1.85) BS01 MZ7 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 MOAD: Ki=0.014nM
    PDBbind: -logKd/Ki=10.85, Ki=0.014nM
    9333 2qi6:A (1.85) BS01 MZ8 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 MOAD: Ki=0.027nM
    PDBbind: -logKd/Ki=10.57, Ki=0.027nM
    9334 2qi6:B (1.85) BS01 MZ8 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 PDBbind: -logKd/Ki=10.57, Ki=0.027nM
    9335 2qi7:A (1.85) BS01 MZ9 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 PDBbind: -logKd/Ki=10.21, Ki=0.062nM
    9336 2qi7:B (1.85) BS01 MZ9 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 18412349 MOAD: Ki=0.062nM
    PDBbind: -logKd/Ki=10.21, Ki=0.062nM
    9337 2qio:A (2.44) BS02 TCL 1.3.1.9 GO:0000166 ... A0A6L8PBX8 18663709 MOAD: ic50=3.6uM
    9338 2qio:B (2.44) BS02 TCL 1.3.1.9 GO:0000166 ... A0A6L8PBX8 18663709 MOAD: ic50=3.6uM
    9339 2qio:C (2.44) BS02 TCL 1.3.1.9 GO:0000166 ... A0A6L8PBX8 18663709 MOAD: ic50=3.6uM
    9340 2qio:D (2.44) BS02 TCL 1.3.1.9 GO:0000166 ... A0A6L8PBX8 18663709 MOAD: ic50=3.6uM
    9341 2qiq:A (1.9) BS01 CYV 2.1.1.-
    2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0C6X7 17855091 MOAD: ic50=80uM
    PDBbind: -logKd/Ki=4.10, IC50=80uM
    BindingDB: IC50=80000nM
    9342 2qis:A (1.8) BS03 RIS 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 N/A BindingDB: IC50=11nM, Ki=82.2nM
    9343 2qjr:A (2.2) BS01 PZF 3.4.14.5 GO:0001618 ... P27487 17822893 MOAD: ic50=6.4nM
    BindingDB: IC50=6.4nM
    9344 2qjr:B (2.2) BS01 PZF 3.4.14.5 GO:0001618 ... P27487 17822893 MOAD: ic50=6.4nM
    BindingDB: IC50=6.4nM
    9345 2qju:A (2.9) BS02 DSM ? GO:0005886 ... O67854 17690258 PDBbind: -logKd/Ki=4.10, IC50=80uM
    9346 2qjy:A (2.4) BS03 SMA ? GO:0005886 ... Q02761 18039651 MOAD: Kd~0.7nM
    9347 2qjy:D (2.4) BS03 SMA ? GO:0005886 ... Q02761 18039651 MOAD: Kd~0.7nM
    9348 2qjy:G (2.4) BS03 SMA ? GO:0005886 ... Q02761 18039651 MOAD: Kd~0.7nM
    9349 2qjy:J (2.4) BS03 SMA ? GO:0005886 ... Q02761 18039651 MOAD: Kd~0.7nM
    9350 2qjy:M (2.4) BS03 SMA ? GO:0005886 ... Q02761 18039651 MOAD: Kd~0.7nM
    9351 2qjy:P (2.4) BS03 SMA ? GO:0005886 ... Q02761 18039651 MOAD: Kd~0.7nM
    9352 2qk5:A (2.2) BS01 CS5 3.4.23.46 GO:0004190 ... P56817 18023580 MOAD: ic50=8nM
    PDBbind: -logKd/Ki=8.10, IC50=8nM
    BindingDB: IC50=20nM
    9353 2qk5:B (2.2) BS01 CS5 3.4.23.46 GO:0004190 ... P56817 18023580 MOAD: ic50=8nM
    BindingDB: IC50=20nM
    9354 2qk8:A (2.4) BS01 MTX 1.5.1.3 GO:0000166 ... Q81R22 17696333 MOAD: ic50~20nM
    PDBbind: -logKd/Ki=7.91, IC50=12.2nM
    BindingDB: IC50=15nM
    9355 2qkn:A (2.15) BS02 245 1.5.99.12 GO:0003824 ... Q9T0N8 20478354 MOAD: ic50=18uM
    9356 2qkn:A (2.15) BS03 245 1.5.99.12 GO:0003824 ... Q9T0N8 20478354 MOAD: ic50=18uM
    9357 2qky:A (3.1) BS01 13Z 3.4.14.5 GO:0001618 ... P27487 17544668 BindingDB: IC50=22nM
    9358 2qky:B (3.1) BS01 13Z 3.4.14.5 GO:0001618 ... P27487 17544668 BindingDB: IC50=22nM
    9359 2qky:C (3.1) BS01 13Z 3.4.14.5 GO:0001618 ... P27487 17544668 BindingDB: IC50=22nM
    9360 2qky:D (3.1) BS01 13Z 3.4.14.5 GO:0001618 ... P27487 17544668 BindingDB: IC50=22nM
    9361 2ql2:A (2.5) BS01 dna ? GO:0046983 ... P15806 18069799 PDBbind: Kd=3.5nM
    9362 2ql2:A (2.5) BS02 dna ? GO:0046983 ... P15806 18069799 PDBbind: Kd=3.5nM
    9363 2ql2:B (2.5) BS01 dna ? GO:0046983 ... Q60867 18069799 PDBbind: Kd=3.5nM
    9364 2ql2:B (2.5) BS02 dna ? GO:0046983 ... Q60867 18069799 PDBbind: Kd=3.5nM
    9365 2ql2:C (2.5) BS01 dna ? GO:0046983 ... P15806 18069799 PDBbind: Kd=3.5nM
    9366 2ql2:C (2.5) BS02 dna ? GO:0046983 ... P15806 18069799 PDBbind: Kd=3.5nM
    9367 2ql2:D (2.5) BS01 dna ? GO:0046983 ... Q60867 18069799 PDBbind: Kd=3.5nM
    9368 2ql2:D (2.5) BS02 dna ? GO:0046983 ... Q60867 18069799 PDBbind: Kd=3.5nM
    9369 2qlm:A (2.1) BS01 F68 2.4.1.1 GO:0000166 ... P00489 N/A PDBbind: -logKd/Ki=5.64, Ki=2.3uM
    BindingDB: Ki=2300nM
    9370 2qln:A (2.15) BS01 F59 2.4.1.1 GO:0000166 ... P00489 N/A PDBbind: -logKd/Ki=5.43, Ki=3.7uM
    BindingDB: Ki=3700nM
    9371 2qlq:A (2.33) BS01 SR2 2.7.10.2 GO:0004672 ... P00523 18316192 PDBbind: -logKd/Ki=6.63, IC50=236nM
    BindingDB: IC50=>27000nM
    9372 2qlq:A (2.33) BS02 SR2 2.7.10.2 GO:0004672 ... P00523 18316192 PDBbind: -logKd/Ki=6.63, IC50=236nM
    BindingDB: IC50=>27000nM
    9373 2qlq:B (2.33) BS01 SR2 2.7.10.2 GO:0004672 ... P00523 18316192 BindingDB: IC50=>27000nM
    9374 2qm7:A (1.85) BS01 GDP ? GO:0003924 ... Q8RPA0 17728257 PDBbind: -logKd/Ki=5.89, Kd=1.3uM
    9375 2qm9:A (2.31) BS01 TDZ ? GO:0005324 ... P04117 17761196 MOAD: Kd=17nM
    PDBbind: -logKd/Ki=7.77, Kd=17nM
    9376 2qm9:B (2.31) BS01 TDZ ? GO:0005324 ... P04117 17761196 MOAD: Kd=17nM
    PDBbind: -logKd/Ki=7.77, Kd=17nM
    9377 2qmd:A (1.65) BS01 CS7 3.4.23.46 GO:0004190 ... P56817 18023580 MOAD: ic50=5nM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    BindingDB: IC50=150nM
    9378 2qmd:B (1.65) BS01 CS7 3.4.23.46 GO:0004190 ... P56817 18023580 MOAD: ic50=5nM
    BindingDB: IC50=150nM
    9379 2qmf:A (1.75) BS01 CS9 3.4.23.46 GO:0004190 ... P56817 18023580 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=165nM
    9380 2qmf:B (1.75) BS01 CS9 3.4.23.46 GO:0004190 ... P56817 18023580 MOAD: ic50=3nM
    BindingDB: IC50=165nM
    9381 2qmg:A (1.89) BS01 SC6 3.4.23.46 GO:0004190 ... P56817 17980584 MOAD: Ki=0.7nM
    PDBbind: -logKd/Ki=9.15, Ki=0.7nM
    9382 2qmg:B (1.89) BS01 SC6 3.4.23.46 GO:0004190 ... P56817 17980584 MOAD: Ki=0.7nM
    9383 2qn1:A (2.401) BS01 0AS 2.4.1.1 GO:0000166 ... P00489 18517260 PDBbind: -logKd/Ki=4.77, IC50=17uM
    BindingDB: IC50=17000nM
    9384 2qn2:A (2.698) BS01 0MA 2.4.1.1 GO:0000166 ... P00489 18517260 PDBbind: -logKd/Ki=4.55, IC50=28uM
    9385 2qn3:A (1.96) BS01 F55 2.4.1.1 GO:0000166 ... P00489 N/A PDBbind: -logKd/Ki=5.36, Ki=4.4uM
    BindingDB: Ki=4400nM
    9386 2qn7:A (1.83) BS02 HBZ 2.4.1.1 GO:0000166 ... P00489 N/A BindingDB: Ki=6300nM
    9387 2qn8:A (1.9) BS02 NBY 2.4.1.1 GO:0000166 ... P00489 N/A BindingDB: Ki=3300nM
    9388 2qn8:A (1.9) BS03 NBY 2.4.1.1 GO:0000166 ... P00489 N/A BindingDB: Ki=3300nM
    9389 2qn9:A (2.0) BS02 NBX 2.4.1.1 GO:0000166 ... P00489 N/A BindingDB: Ki=6000nM
    9390 2qnb:A (1.8) BS01 BZD 2.4.1.1 GO:0000166 ... P00489 N/A PDBbind: -logKd/Ki=5.34, Ki=4.6uM
    BindingDB: Ki=4600nM
    9391 2qnb:A (1.8) BS02 BZD 2.4.1.1 GO:0000166 ... P00489 N/A PDBbind: -logKd/Ki=5.34, Ki=4.6uM
    BindingDB: Ki=4600nM
    9392 2qnn:A (1.48) BS01 QN1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 18348517 PDBbind: -logKd/Ki=7.15, Ki=0.07uM
    9393 2qnn:B (1.48) BS01 QN1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 18348517 MOAD: Ki=0.07uM
    PDBbind: -logKd/Ki=7.15, Ki=0.07uM
    9394 2qnp:A (1.41) BS01 QN2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 18348517 MOAD: Ki=0.39uM
    PDBbind: -logKd/Ki=6.41, Ki=0.39uM
    9395 2qnp:B (1.41) BS01 QN2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 18348517 PDBbind: -logKd/Ki=6.41, Ki=0.39uM
    9396 2qnq:A (2.3) BS01 QN3 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 18348517 MOAD: Ki=0.77uM
    PDBbind: -logKd/Ki=6.11, Ki=0.77uM
    9397 2qnq:B (2.3) BS01 QN3 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 18348517 PDBbind: -logKd/Ki=6.11, Ki=0.77uM
    9398 2qnx:A (2.7) BS01 UDT 2.3.1.301 GO:0000062 ... P9WNG3 18420147 PDBbind: -logKd/Ki=5.62, IC50=2.4uM
    9399 2qnx:B (2.7) BS01 UDT 2.3.1.301 GO:0000062 ... P9WNG3 18420147 PDBbind: -logKd/Ki=5.62, IC50=2.4uM
    9400 2qnz:A (2.3) BS01 DFD 2.3.1.301 GO:0000062 ... P9WNG3 18420147 PDBbind: -logKd/Ki=5.42, IC50=3.8uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218