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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    8001 2isj:H (2.3) BS02 FMN 1.13.11.79 GO:0000166 ... Q92PC8 17377583 MOAD: Ki=231uM
    8002 2iso:A (2.1) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 17209556 PDBbind: Kd=2.9uM
    8003 2iso:A (2.1) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 17209556 PDBbind: Kd=2.9uM
    8004 2iso:A (2.1) BS03 dna 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 17209556 PDBbind: Kd=2.9uM
    8005 2isp:A (2.2) BS01 dna 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 17209556 PDBbind: Kd=0.75uM
    8006 2isp:A (2.2) BS02 dna 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 17209556 PDBbind: Kd=0.75uM
    8007 2isp:A (2.2) BS03 dna 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 17209556 PDBbind: Kd=0.75uM
    8008 2isv:A (2.3) BS02 PGH 4.1.2.13 GO:0004332 ... A8B2U2 17166851 MOAD: Ki=37nM
    PDBbind: -logKd/Ki=7.43, Ki=37nM
    8009 2isv:B (2.3) BS02 PGH 4.1.2.13 GO:0004332 ... A8B2U2 17166851 MOAD: Ki=37nM
    PDBbind: -logKd/Ki=7.43, Ki=37nM
    8010 2isw:A (1.75) BS02 PGH 4.1.2.13 GO:0004332 ... A8B2U2 17166851 MOAD: Ki=37nM
    PDBbind: -logKd/Ki=7.43, Ki=37nM
    8011 2isz:A (2.403) BS01 dna ? GO:0003677 ... P9WMH1 17209554 PDBbind: Kd=4uM
    8012 2isz:A (2.403) BS02 dna ? GO:0003677 ... P9WMH1 17209554 PDBbind: Kd=4uM
    8013 2isz:B (2.403) BS01 dna ? GO:0003677 ... P9WMH1 17209554 PDBbind: Kd=4uM
    8014 2isz:B (2.403) BS02 dna ? GO:0003677 ... P9WMH1 17209554 PDBbind: Kd=4uM
    8015 2isz:C (2.403) BS01 dna ? GO:0003677 ... P9WMH1 17209554 PDBbind: Kd=4uM
    8016 2isz:C (2.403) BS02 dna ? GO:0003677 ... P9WMH1 17209554 PDBbind: Kd=4uM
    8017 2isz:D (2.403) BS01 dna ? GO:0003677 ... P9WMH1 17209554 PDBbind: Kd=4uM
    8018 2isz:D (2.403) BS02 dna ? GO:0003677 ... P9WMH1 17209554 PDBbind: Kd=4uM
    8019 2it0:A (2.6) BS01 dna ? GO:0003677 ... P9WMH1 17209554 PDBbind: Kd=25uM
    8020 2it0:A (2.6) BS02 dna ? GO:0003677 ... P9WMH1 17209554 PDBbind: Kd=25uM
    8021 2it0:B (2.6) BS01 dna ? GO:0003677 ... P9WMH1 17209554 PDBbind: Kd=25uM
    8022 2it0:B (2.6) BS02 dna ? GO:0003677 ... P9WMH1 17209554 PDBbind: Kd=25uM
    8023 2it0:C (2.6) BS01 dna ? GO:0003677 ... P9WMH1 17209554 PDBbind: Kd=25uM
    8024 2it0:C (2.6) BS02 dna ? GO:0003677 ... P9WMH1 17209554 PDBbind: Kd=25uM
    8025 2it0:D (2.6) BS01 dna ? GO:0003677 ... P9WMH1 17209554 PDBbind: Kd=25uM
    8026 2it0:D (2.6) BS02 dna ? GO:0003677 ... P9WMH1 17209554 PDBbind: Kd=25uM
    8027 2it4:A (2.0) BS02 PPF 4.2.1.1
    4.2.1.69    		 GO:0004064 ... P00915 17314045 MOAD: Ki=24.1mM
    PDBbind: -logKd/Ki=1.62, Ki=24.1mM
    8028 2itm:A (2.1) BS01 XUL 2.7.1.-
    2.7.1.17    		 GO:0004856 ... P09099 17123542 MOAD: Kd=0.074mM
    8029 2itm:B (2.1) BS01 XUL 2.7.1.-
    2.7.1.17    		 GO:0004856 ... P09099 17123542 MOAD: Kd=0.074mM
    8030 2ito:A (3.25) BS01 IRE 2.7.10.1 GO:0004672 ... P00533 17349580 PDBbind: -logKd/Ki=6.91, Kd=123.6nM
    8031 2itp:A (2.74) BS01 AEE 2.7.10.1 GO:0004672 ... P00533 17349580 PDBbind: -logKd/Ki=7.95, Kd=11.3nM
    BindingDB: Kd=5.3nM, IC50=2nM
    8032 2itt:A (2.73) BS01 AEE 2.7.10.1 GO:0004672 ... P00533 17349580 PDBbind: -logKd/Ki=8.77, Kd=1.7nM
    BindingDB: Kd=5.3nM, IC50=2nM
    8033 2ity:A (3.42) BS01 IRE 2.7.10.1 GO:0004672 ... P00533 17349580 PDBbind: -logKd/Ki=7.27, Kd=53.5nM
    8034 2itz:A (2.8) BS01 IRE 2.7.10.1 GO:0004672 ... P00533 17349580 PDBbind: -logKd/Ki=8.59, Kd=2.6nM
    8035 2iu0:B (2.53) BS01 203 2.1.2.3
    3.5.4.10    		 GO:0003824 ... P31335 17324932 PDBbind: -logKd/Ki=6.89, Ki=0.13uM
    8036 2iuz:A (1.95) BS01 D1H 3.2.1.14 GO:0004553 ... Q873X9 16844689 MOAD: Ki=2.8uM
    PDBbind: -logKd/Ki=5.55, Ki=2.8uM
    BindingDB: IC50=4800nM
    8037 2iuz:B (1.95) BS01 D1H 3.2.1.14 GO:0004553 ... Q873X9 16844689 MOAD: Ki=2.8uM
    BindingDB: IC50=4800nM
    8038 2ivu:A (2.5) BS01 ZD6 2.7.10.1 GO:0004672 ... P07949 16928683 MOAD: Ki=375nM
    PDBbind: -logKd/Ki=6.43, Ki=375nM
    BindingDB: Kd=14nM, IC50=4.00nM
    8039 2ivv:A (2.25) BS01 PP1 2.7.10.1 GO:0004672 ... P07949 16928683 BindingDB: IC50=11nM
    8040 2iw4:A (2.15) BS06 2PN 3.6.1.1 GO:0004427 ... P37487 17095506 MOAD: Kd=12uM
    8041 2iw4:B (2.15) BS05 2PN 3.6.1.1 GO:0004427 ... P37487 17095506 MOAD: Kd=12uM
    8042 2iw6:A (2.3) BS01 QQ2 2.7.11.22 GO:0000082 ... P24941 16942020 MOAD: ic50=0.14uM
    PDBbind: -logKd/Ki=6.85, IC50=0.14uM
    BindingDB: IC50=2600nM
    8043 2iw6:C (2.3) BS01 QQ2 2.7.11.22 GO:0000082 ... P24941 16942020 MOAD: ic50=0.14uM
    BindingDB: IC50=2600nM
    8044 2iw8:A (2.3) BS01 4SP 2.7.11.22 GO:0000082 ... P24941 16942020 MOAD: ic50=103nM
    PDBbind: -logKd/Ki=6.99, IC50=103nM
    BindingDB: IC50=6.0nM, Ki=6.0nM, Kd=1310nM
    8045 2iw8:C (2.3) BS01 4SP 2.7.11.22 GO:0000082 ... P24941 16942020 MOAD: ic50=103nM
    BindingDB: IC50=6.0nM, Ki=6.0nM, Kd=1310nM
    8046 2iw9:A (2.0) BS01 4SP 2.7.11.22 GO:0000082 ... P24941 16942020 MOAD: ic50=8.9nM
    BindingDB: IC50=6.0nM, Ki=6.0nM, Kd=1310nM
    8047 2iw9:C (2.0) BS01 4SP 2.7.11.22 GO:0000082 ... P24941 16942020 MOAD: ic50=8.9nM
    BindingDB: IC50=6.0nM, Ki=6.0nM, Kd=1310nM
    8048 2iws:A (2.7) BS01 NP4 ? GO:0005524 ... P02829 17114002 PDBbind: -logKd/Ki=6.36, Kd=0.44uM
    BindingDB: IC50=5.0e+2nM
    8049 2iwu:A (2.8) BS01 NP5 ? GO:0005524 ... P02829 17114002 PDBbind: -logKd/Ki=5.92, Kd=1.2uM
    BindingDB: IC50=3.5e+3nM
    8050 2iwx:A (1.5) BS01 M1S ? GO:0005524 ... P02829 17114002 MOAD: Kd=0.21uM
    PDBbind: -logKd/Ki=6.68, Kd=0.21uM
    BindingDB: IC50=7.6e+2nM
    8051 2ixh:A (2.0) BS01 TRH 5.1.3.13 GO:0005829 ... Q9HU21 17046787 MOAD: Ka=11600M^-1
    8052 2ixh:B (2.0) BS01 TRH 5.1.3.13 GO:0005829 ... Q9HU21 17046787 MOAD: Ka=11600M^-1
    8053 2ixi:A (1.8) BS01 TYD 5.1.3.13 GO:0005829 ... Q9HU21 17046787 MOAD: Ka=1320M^-1
    8054 2ixi:B (1.8) BS01 TYD 5.1.3.13 GO:0005829 ... Q9HU21 17046787 MOAD: Ka=1320M^-1
    8055 2ixi:B (1.8) BS02 TYD 5.1.3.13 GO:0005829 ... Q9HU21 17046787 MOAD: Ka=1320M^-1
    8056 2iyf:A (1.7) BS01 ERY 2.4.1.- GO:0008194 ... Q53685 17376874 PDBbind: -logKd/Ki=3.75, Ki=177.3uM
    8057 2izf:B (1.58) BS01 BTN ? GO:0009374 ... P22629 9405158 BindingDB: Kd=1.000000nM
    8058 2izf:D (1.58) BS01 BTN ? GO:0009374 ... P22629 9405158 BindingDB: Kd=1.000000nM
    8059 2izg:B (1.36) BS01 BTN ? GO:0009374 ... P22629 9405158 BindingDB: Kd=1.000000nM
    8060 2izg:D (1.36) BS01 BTN ? GO:0009374 ... P22629 9405158 BindingDB: Kd=1.000000nM
    8061 2izh:B (1.36) BS01 BTN ? GO:0009374 ... P22629 9405158 BindingDB: Kd=1.000000nM
    8062 2izh:D (1.36) BS01 BTN ? GO:0009374 ... P22629 9405158 BindingDB: Kd=1.000000nM
    8063 2izi:A (1.5) BS01 BTN ? GO:0009374 ... P22629 9405158 BindingDB: Kd=1.000000nM
    8064 2izj:A (1.3) BS01 BTN ? GO:0009374 ... P22629 9405158 BindingDB: Kd=1.000000nM
    8065 2izl:B (1.48) BS01 IMI ? GO:0009374 ... P22629 9405158 MOAD: Kd=1uM
    PDBbind: -logKd/Ki=6.00, Kd=1uM
    8066 2izl:D (1.48) BS01 IMI ? GO:0009374 ... P22629 9405158 MOAD: Kd=1uM
    8067 2j0d:A (2.75) BS02 ERY 1.14.14.1
    1.14.14.55
    1.14.14.56
    1.14.14.73    		 GO:0002933 ... P08684 16954191 BindingDB: IC50=190nM
    8068 2j14:A (2.8) BS01 GNI ? GO:0003677 ... Q03181 16931011 BindingDB: EC50=70nM
    8069 2j14:B (2.8) BS01 GNI ? GO:0003677 ... Q03181 16931011 BindingDB: EC50=70nM
    8070 2j1a:A (1.49) BS01 GAL 3.2.1.169 N/A Q0TR53 16990278 MOAD: Kd=980uM
    8071 2j27:A (1.15) BS01 PGA 5.3.1.1 GO:0004807 ... P04789 17176070 MOAD: Ki=0.3mM
    PDBbind: -logKd/Ki=3.52, Ki=0.3mM
    8072 2j27:B (1.15) BS01 PGA 5.3.1.1 GO:0004807 ... P04789 17176070 MOAD: Ki=0.3mM
    PDBbind: -logKd/Ki=3.52, Ki=0.3mM
    8073 2j2i:B (1.9) BS01 LY4 2.7.11.1 GO:0004672 ... P11309 18077363 MOAD: ic50=0.2uM
    PDBbind: -logKd/Ki=6.70, IC50=200nM
    BindingDB: Kd=270nM, IC50=200nM
    8074 2j2u:A (1.9) BS01 GSQ 3.4.21.6 GO:0004252 ... P00742 16982192 MOAD: Ki=90nM
    PDBbind: -logKd/Ki=7.33, Ki=47nM
    BindingDB: Ki=90nM
    8075 2j34:A (2.01) BS01 GS6 3.4.21.6 GO:0004252 ... P00742 16982192 MOAD: Ki=15nM
    PDBbind: -logKd/Ki=7.82, Ki=15nM
    BindingDB: Ki=15nM
    8076 2j38:A (2.1) BS01 GS5 3.4.21.6 GO:0004252 ... P00742 16982192 MOAD: Ki=47nM
    BindingDB: Ki=47nM
    8077 2j3q:A (2.8) BS01 TFL 3.1.1.7 GO:0001507 ... P04058 18512913 PDBbind: -logKd/Ki=6.15, Kd=0.7uM
    8078 2j47:A (1.98) BS01 GDV 3.2.1.169 GO:0005975 ... Q89ZI2 17057847 MOAD: Ki=3.9uM
    PDBbind: -logKd/Ki=5.41, Ki=3.9uM
    8079 2j4a:A (2.2) BS01 OEF ? GO:0003677 ... P10828 17154490 PDBbind: -logKd/Ki=10.60, IC50=0.025nM
    BindingDB: IC50=0.0251nM
    8080 2j4g:A (2.25) BS01 NB1 3.2.1.169 GO:0005975 ... Q89ZI2 17227027 MOAD: Ki=0.25uM
    PDBbind: -logKd/Ki=6.60, Ki=0.25uM
    8081 2j4g:B (2.25) BS01 NB1 3.2.1.169 GO:0005975 ... Q89ZI2 17227027 MOAD: Ki=0.25uM
    8082 2j4i:A (1.8) BS01 GSJ 3.4.21.6 GO:0004252 ... P00742 16982190 MOAD: Ki=1nM
    PDBbind: -logKd/Ki=9.00, Ki=1nM
    BindingDB: Ki=1nM
    8083 2j4k:A (2.2) BS01 U5P 2.7.4.22 GO:0005524 ... Q97ZE2 17297917 MOAD: Kd=14uM
    PDBbind: -logKd/Ki=4.85, Kd=14uM
    8084 2j4k:B (2.2) BS01 U5P 2.7.4.22 GO:0005524 ... Q97ZE2 17297917 MOAD: Kd=14uM
    8085 2j4k:C (2.2) BS01 U5P 2.7.4.22 GO:0005524 ... Q97ZE2 17297917 MOAD: Kd=14uM
    8086 2j4k:D (2.2) BS01 U5P 2.7.4.22 GO:0005524 ... Q97ZE2 17297917 MOAD: Kd=14uM
    8087 2j4k:E (2.2) BS01 U5P 2.7.4.22 GO:0005524 ... Q97ZE2 17297917 MOAD: Kd=14uM
    PDBbind: -logKd/Ki=4.85, Kd=14uM
    8088 2j4k:F (2.2) BS01 U5P 2.7.4.22 GO:0005524 ... Q97ZE2 17297917 MOAD: Kd=14uM
    8089 2j4z:A (2.0) BS01 626 2.7.11.1 GO:0000212 ... O14965 17125279 MOAD: ic50=65nM
    PDBbind: -logKd/Ki=7.19, IC50=65nM
    8090 2j4z:B (2.0) BS01 626 2.7.11.1 GO:0000212 ... O14965 17125279 MOAD: ic50=65nM
    8091 2j50:A (3.0) BS01 627 2.7.11.1 GO:0000212 ... O14965 17125279 PDBbind: -logKd/Ki=7.89, IC50=13nM
    8092 2j5f:A (3.0) BS01 DJK 2.7.10.1 GO:0004672 ... P00533 17334377 BindingDB: IC50=2nM
    8093 2j62:A (2.26) BS01 GSZ 3.2.1.169 N/A Q0TR53 17177381 MOAD: Ki=4.6pM
    PDBbind: -logKd/Ki=11.34, Ki=4.6pM
    8094 2j62:B (2.26) BS01 GSZ 3.2.1.169 N/A Q0TR53 17177381 MOAD: Ki=4.6pM
    PDBbind: -logKd/Ki=11.34, Ki=4.6pM
    8095 2j6m:A (3.1) BS01 AEE 2.7.10.1 GO:0004672 ... P00533 17349580 PDBbind: -logKd/Ki=7.96, Kd=10.9nM
    BindingDB: Kd=5.3nM, IC50=2nM
    8096 2j75:A (1.85) BS01 NOY 3.2.1.21 GO:0004553 ... Q08638 17279749 PDBbind: -logKd/Ki=6.65, Kd=225nM
    8097 2j77:A (2.1) BS01 NOJ 3.2.1.21 GO:0004553 ... Q08638 17279749 MOAD: Kd=12.9uM
    PDBbind: -logKd/Ki=4.89, Kd=12.9uM
    8098 2j77:B (2.1) BS01 NOJ 3.2.1.21 GO:0004553 ... Q08638 17279749 MOAD: Kd=12.9uM
    8099 2j78:A (1.65) BS03 GOX 3.2.1.21 GO:0004553 ... Q08638 17279749 MOAD: Kd=384nM
    PDBbind: -logKd/Ki=6.42, Kd=384nM
    8100 2j78:B (1.65) BS01 GOX 3.2.1.21 GO:0004553 ... Q08638 17279749 MOAD: Kd=384nM
    8101 2j79:A (1.94) BS01 GTL 3.2.1.21 GO:0004553 ... Q08638 17279749 MOAD: Kd=1.1uM
    PDBbind: -logKd/Ki=5.96, Kd=1.1uM
    8102 2j79:B (1.94) BS01 GTL 3.2.1.21 GO:0004553 ... Q08638 17279749 MOAD: Kd=1.1uM
    8103 2j7b:A (1.87) BS01 NTZ 3.2.1.21 GO:0004553 ... Q08638 17279749 MOAD: Kd=240nM
    PDBbind: -logKd/Ki=6.62, Kd=240nM
    8104 2j7b:B (1.87) BS01 NTZ 3.2.1.21 GO:0004553 ... Q08638 17279749 MOAD: Kd=240nM
    8105 2j7c:A (2.09) BS01 IDE 3.2.1.21 GO:0004553 ... Q08638 17279749 MOAD: Ki=10.7nM
    8106 2j7c:B (2.09) BS01 IDE 3.2.1.21 GO:0004553 ... Q08638 17279749 MOAD: Ki=10.7nM
    8107 2j7d:A (2.24) BS01 GI1 3.2.1.21 GO:0004553 ... Q08638 17279749 MOAD: Kd=74nM
    PDBbind: -logKd/Ki=7.13, Kd=74nM
    8108 2j7d:B (2.24) BS01 GI1 3.2.1.21 GO:0004553 ... Q08638 17279749 MOAD: Kd=74nM
    8109 2j7e:A (2.19) BS01 GI2 3.2.1.21 GO:0004553 ... Q08638 17279749 MOAD: Kd=48nM
    PDBbind: -logKd/Ki=7.32, Kd=48nM
    8110 2j7e:B (2.19) BS01 GI2 3.2.1.21 GO:0004553 ... Q08638 17279749 MOAD: Kd=48nM
    8111 2j7f:A (2.28) BS01 GI3 3.2.1.21 GO:0004553 ... Q08638 17279749 MOAD: Kd=445nM
    PDBbind: -logKd/Ki=6.35, Kd=445nM
    8112 2j7f:B (2.28) BS01 GI3 3.2.1.21 GO:0004553 ... Q08638 17279749 MOAD: Kd=445nM
    8113 2j7g:A (1.91) BS01 GI4 3.2.1.21 GO:0004553 ... Q08638 17279749 MOAD: Kd=100nM
    PDBbind: -logKd/Ki=7.00, Kd=100nM
    8114 2j7g:B (1.91) BS01 GI4 3.2.1.21 GO:0004553 ... Q08638 17279749 MOAD: Kd=100nM
    8115 2j7h:A (1.95) BS01 AZF 3.2.1.21 GO:0004553 ... Q08638 17279749 MOAD: Kd=65nM
    PDBbind: -logKd/Ki=7.19, Kd=65nM
    8116 2j7h:B (1.95) BS01 AZF 3.2.1.21 GO:0004553 ... Q08638 17279749 MOAD: Kd=65nM
    8117 2j7w:A (2.6) BS03 GTP 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13    		 GO:0003968 ... Q6YMS4 17301146 PDBbind: -logKd/Ki=6.66, IC50=0.22uM
    8118 2j7x:A (2.1) BS02 EST ? N/A Q62986 N/A PDBbind: -logKd/Ki=8.77, IC50=1.7nM
    BindingDB: EC50=0.14nM, IC50=1.7nM
    8119 2j83:A (2.0) BS01 BAT 3.4.24.- GO:0008237 ... Q8TL28 17097044 MOAD: ic50=61uM
    PDBbind: -logKd/Ki=4.21, IC50=61uM
    8120 2j83:B (2.0) BS01 BAT 3.4.24.- GO:0008237 ... Q8TL28 17097044 MOAD: ic50=61uM
    PDBbind: -logKd/Ki=4.21, IC50=61uM
    8121 2j87:A (3.1) BS01 TTP 2.7.1.21 GO:0004797 ... O57203 17062140 PDBbind: -logKd/Ki=4.85, IC50=14uM
    8122 2j87:C (3.1) BS01 TTP 2.7.1.21 GO:0004797 ... O57203 17062140 PDBbind: -logKd/Ki=4.85, IC50=14uM
    8123 2j94:A (2.1) BS01 G15 3.4.21.6 GO:0004252 ... P00742 17338508 MOAD: Ki=534nM
    PDBbind: -logKd/Ki=6.27, Ki=534nM
    8124 2j95:A (2.01) BS01 GSX 3.4.21.6 GO:0004252 ... P00742 17338508 MOAD: Ki=4nM
    PDBbind: -logKd/Ki=8.40, Ki=4nM
    BindingDB: Ki=4nM
    8125 2j9a:A (1.73) BS04 AHY 3.4.11.1
    3.4.11.5
    3.4.13.23    		 GO:0004177 ... P00727 17157838 PDBbind: -logKd/Ki=5.89, IC50=1.3uM
    8126 2j9h:A (2.4) BS01 GTX 2.5.1.18 GO:0000302 ... P09211 18177897 MOAD: Ki=410uM
    PDBbind: -logKd/Ki=3.39, Ki=410uM
    8127 2j9h:B (2.4) BS01 GTX 2.5.1.18 GO:0000302 ... P09211 18177897 MOAD: Ki=410uM
    PDBbind: -logKd/Ki=3.39, Ki=410uM
    8128 2j9l:A (2.3) BS01 ATP ? N/A P51795 17195847 MOAD: Kd=90uM
    PDBbind: -logKd/Ki=4.00, Kd=100uM
    8129 2j9l:B (2.3) BS01 ATP ? N/A P51795 17195847 MOAD: Kd=90uM
    8130 2j9l:C (2.3) BS01 ATP ? N/A P51795 17195847 MOAD: Kd=90uM
    PDBbind: -logKd/Ki=4.00, Kd=100uM
    8131 2j9l:D (2.3) BS01 ATP ? N/A P51795 17195847 MOAD: Kd=90uM
    8132 2j9l:E (2.3) BS01 ATP ? N/A P51795 17195847 MOAD: Kd=90uM
    8133 2j9l:F (2.3) BS01 ATP ? N/A P51795 17195847 MOAD: Kd=90uM
    8134 2j9m:A (2.5) BS01 PY8 2.7.11.22 GO:0000082 ... P24941 17131463 BindingDB: IC50=140nM
    8135 2ja3:A (3.05) BS01 ADP ? N/A P51795 17195847 PDBbind: -logKd/Ki=4.00, Kd=100uM
    8136 2jai:A (2.3) BS01 CIR 3.5.3.18 GO:0000052 ... O94760 17273169 BindingDB: Ki=3.700e+6nM
    8137 2jaj:A (2.0) BS01 D20 3.5.3.18 GO:0000052 ... O94760 17273169 MOAD: ic50<25uM
    PDBbind: -logKd/Ki=4.60, IC50=25uM
    BindingDB: Ki=13000nM, IC50=29000nM
    8138 2jaj:B (2.0) BS01 D20 3.5.3.18 GO:0000052 ... O94760 17273169 MOAD: ic50<25uM
    BindingDB: Ki=13000nM, IC50=29000nM
    8139 2jal:A (1.9) BS01 YLL 3.2.1.21 GO:0004553 ... Q08638 17252125 PDBbind: -logKd/Ki=4.82, Ki=15uM
    8140 2jav:A (2.2) BS01 5Z5 2.7.11.1 GO:0004672 ... P51955 17197699 MOAD: ic50~8uM
    8141 2jb5:H (2.8) BS01 T5C N/A N/A N/A 18241888 PDBbind: -logKd/Ki=9.22, Kd=600pM
    8142 2jb5:L (2.8) BS01 T5C ? GO:0002250 ... P0DOY2 18241888 PDBbind: -logKd/Ki=9.22, Kd=600pM
    8143 2jb6:A (2.85) BS01 T5C ? GO:0002250 ... P0DOY2 18241888 PDBbind: -logKd/Ki=10.96, Kd=11pM
    8144 2jb6:B (2.85) BS01 T5C N/A N/A N/A 18241888 PDBbind: -logKd/Ki=10.96, Kd=11pM
    8145 2jbj:A (2.19) BS04 G88 3.4.17.21 GO:0004180 ... Q04609 17372356 MOAD: Ki=0.2nM
    PDBbind: -logKd/Ki=9.70, Ki=0.2nM
    BindingDB: Ki=0.280000nM, IC50=300nM, Kd=0.5nM, EC50=0.620000nM
    8146 2jbk:A (2.99) BS04 QUS 3.4.17.21 GO:0004180 ... Q04609 17372356 PDBbind: -logKd/Ki=6.40, Ki=0.4uM
    8147 2jbl:L (2.4) BS04 SMA ? GO:0009772 ... P06009 17337272 PDBbind: -logKd/Ki=5.89, IC50=1.3uM
    8148 2jbo:A (3.1) BS01 P4O 2.7.11.1 GO:0004672 ... P49137 17449059 PDBbind: -logKd/Ki=8.07, IC50=8.5nM
    BindingDB: IC50=8.5nM, EC50=49nM
    8149 2jbp:A (3.31) BS01 P4O 2.7.11.1 GO:0004672 ... P49137 17449059 PDBbind: -logKd/Ki=8.07, IC50=8.5nM
    BindingDB: IC50=8.5nM, EC50=49nM
    8150 2jbp:B (3.31) BS01 P4O 2.7.11.1 GO:0004672 ... P49137 17449059 BindingDB: IC50=8.5nM, EC50=49nM
    8151 2jbp:C (3.31) BS01 P4O 2.7.11.1 GO:0004672 ... P49137 17449059 BindingDB: IC50=8.5nM, EC50=49nM
    8152 2jbp:D (3.31) BS01 P4O 2.7.11.1 GO:0004672 ... P49137 17449059 BindingDB: IC50=8.5nM, EC50=49nM
    8153 2jbp:E (3.31) BS01 P4O 2.7.11.1 GO:0004672 ... P49137 17449059 BindingDB: IC50=8.5nM, EC50=49nM
    8154 2jbp:F (3.31) BS01 P4O 2.7.11.1 GO:0004672 ... P49137 17449059 BindingDB: IC50=8.5nM, EC50=49nM
    8155 2jbp:G (3.31) BS01 P4O 2.7.11.1 GO:0004672 ... P49137 17449059 BindingDB: IC50=8.5nM, EC50=49nM
    8156 2jbp:H (3.31) BS01 P4O 2.7.11.1 GO:0004672 ... P49137 17449059 BindingDB: IC50=8.5nM, EC50=49nM
    8157 2jbp:I (3.31) BS01 P4O 2.7.11.1 GO:0004672 ... P49137 17449059 BindingDB: IC50=8.5nM, EC50=49nM
    8158 2jbp:K (3.31) BS01 P4O 2.7.11.1 GO:0004672 ... P49137 17449059 BindingDB: IC50=8.5nM, EC50=49nM
    8159 2jbp:L (3.31) BS01 P4O 2.7.11.1 GO:0004672 ... P49137 17449059 BindingDB: IC50=8.5nM, EC50=49nM
    8160 2jbv:A (1.86) BS01 FAO 1.1.3.17 GO:0000166 ... Q7X2H8 18072756 PDBbind: -logKd/Ki=3.54, Kd=0.29mM
    8161 2jbz:A (1.62) BS01 COA 2.7.8.7 GO:0000287 ... O86785 21595442 MOAD: Kd=0.38uM
    8162 2jc0:A (2.2) BS01 699 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 17269759 MOAD: ic50=20uM
    PDBbind: -logKd/Ki=4.70, IC50=20uM
    8163 2jc0:A (2.2) BS02 699 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 17269759 MOAD: ic50=20uM
    PDBbind: -logKd/Ki=4.70, IC50=20uM
    8164 2jc0:B (2.2) BS01 699 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 17269759 MOAD: ic50=20uM
    8165 2jc0:B (2.2) BS02 699 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 17269759 MOAD: ic50=20uM
    8166 2jc1:A (2.0) BS01 698 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 17269759 MOAD: ic50=3.8uM
    8167 2jc1:B (2.0) BS01 698 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 17269759 MOAD: ic50=3.8uM
    8168 2jcv:A (2.2) BS01 FOM 1.1.1.267 GO:0000287 ... P9WNS1 17491006 MOAD: ic50=80nM
    BindingDB: IC50=80nM, Ki=140nM, Kd=40nM
    8169 2jcx:A (2.1) BS01 FOM 1.1.1.267 GO:0000287 ... P9WNS1 17491006 MOAD: ic50=80nM
    BindingDB: IC50=80nM, Ki=140nM, Kd=40nM
    8170 2jdc:A (1.6) BS01 CAO ? GO:0016740 ... Q65LG7 17272278 MOAD: Ki=9uM
    8171 2jdh:A (1.1) BS01 FUC ? GO:0030246 ... Q9HYN5 17623286 PDBbind: -logKd/Ki=6.51, Kd=0.31uM
    8172 2jdh:B (1.1) BS01 FUC ? GO:0030246 ... Q9HYN5 17623286 PDBbind: -logKd/Ki=6.51, Kd=0.31uM
    8173 2jdk:A (1.1) BS01 FUC ? GO:0030246 ... Q9HYN5 17623286 PDBbind: -logKd/Ki=6.54, Kd=0.29uM
    8174 2jdk:B (1.1) BS01 FUC ? GO:0030246 ... Q9HYN5 17623286 PDBbind: -logKd/Ki=6.54, Kd=0.29uM
    8175 2jdm:B (1.7) BS03 MFU ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=3.96uM
    PDBbind: -logKd/Ki=5.40, Kd=3.96uM
    8176 2jdm:C (1.7) BS03 MFU ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=3.96uM
    8177 2jdm:D (1.7) BS03 MFU ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=3.96uM
    8178 2jdn:B (1.3) BS01 MMA ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=2.78uM
    8179 2jdn:C (1.3) BS01 MMA ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=2.78uM
    8180 2jdn:D (1.3) BS01 MMA ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=2.78uM
    8181 2jdo:A (1.8) BS02 I5S 2.7.11.1 GO:0004672 ... P31751 17275837 MOAD: ic50=0.23uM
    PDBbind: -logKd/Ki=6.64, IC50=0.23uM
    BindingDB: IC50=260nM
    8182 2jdp:A (1.3) BS01 MFU ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=0.25uM
    PDBbind: -logKd/Ki=6.60, Kd=0.25uM
    8183 2jdp:B (1.3) BS01 MFU ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=0.25uM
    PDBbind: -logKd/Ki=6.60, Kd=0.25uM
    8184 2jdp:C (1.3) BS01 MFU ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=0.25uM
    8185 2jdp:D (1.3) BS01 MFU ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=0.25uM
    8186 2jdr:A (2.3) BS02 L20 2.7.11.1 GO:0004672 ... P31751 17275837 MOAD: ic50=0.5nM
    BindingDB: IC50=0.5nM
    8187 2jds:A (2.0) BS02 L20 2.7.11.11 GO:0001669 ... P00517 17275837 MOAD: Ki=6.3nM
    PDBbind: -logKd/Ki=8.20, Ki=6.3nM
    BindingDB: IC50=6nM
    8188 2jdt:A (2.15) BS02 I5S 2.7.11.11 GO:0001669 ... P00517 17275837 PDBbind: -logKd/Ki=6.77, IC50=0.17uM
    BindingDB: IC50=170nM
    8189 2jdu:C (1.5) BS03 MFU ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=0.19uM
    PDBbind: -logKd/Ki=6.72, Kd=0.19uM
    8190 2jdu:D (1.5) BS03 MFU ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=0.19uM
    PDBbind: -logKd/Ki=6.72, Kd=0.19uM
    8191 2jdv:A (2.08) BS02 L20 2.7.11.11 GO:0001669 ... P00517 17275837 PDBbind: -logKd/Ki=8.20, Ki=6.3nM
    BindingDB: IC50=6nM
    8192 2jdy:A (1.7) BS01 MMA ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=42.9uM
    8193 2jdy:B (1.7) BS01 MMA ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=42.9uM
    8194 2jdy:C (1.7) BS01 MMA ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=42.9uM
    8195 2jdy:D (1.7) BS01 MMA ? GO:0030246 ... Q9HYN5 17540045 MOAD: Kd=42.9uM
    8196 2jev:A (2.3) BS01 NHQ 2.3.1.57 GO:0001525 ... P21673 17516632 MOAD: Ki=6nM
    8197 2jev:A (2.3) BS02 NHQ 2.3.1.57 GO:0001525 ... P21673 17516632 MOAD: Ki=6nM
    8198 2jev:B (2.3) BS01 NHQ 2.3.1.57 GO:0001525 ... P21673 17516632 MOAD: Ki=6nM
    8199 2jev:B (2.3) BS02 NHQ 2.3.1.57 GO:0001525 ... P21673 17516632 MOAD: Ki=6nM
    8200 2jew:A (1.4) BS03 720 3.4.17.2 GO:0004181 ... P09955 17990866 MOAD: Ki=206nM
    PDBbind: -logKd/Ki=6.69, Ki=206nM
    BindingDB: Ki=206nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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