Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 1 2 3 4 5 6 7 8 9 10 11 12 13 14 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    601 1dls:A (2.3) BS02 MTX 1.5.1.3 GO:0000900 ... P00374 7890613 MOAD: Ki=10.9nM
    BindingDB: IC50=22nM, Kd=0.194984nM, Ki=4420nM, EC50=13.3nM
    602 1dm2:A (2.1) BS01 HMD 2.7.11.22 GO:0000082 ... P24941 10662688 PDBbind: -logKd/Ki=7.15, IC50=70nM
    603 1dmp:A (2.0) BS01 DMQ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 8807858 PDBbind: -logKd/Ki=9.55, Ki=0.28nM
    604 1dmp:B (2.0) BS01 DMQ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 8807858 MOAD: Ki=0.28nM
    PDBbind: -logKd/Ki=9.55, Ki=0.28nM
    605 1dmt:A (2.1) BS02 RDF 3.4.24.11 GO:0001786 ... P08473 10669592 PDBbind: -logKd/Ki=8.70, IC50=2nM
    BindingDB: IC50=30nM
    606 1dmy:A (2.45) BS02 AZM 4.2.1.1 GO:0004089 ... P23589 7479916 BindingDB: Ki=60nM
    607 1dmy:B (2.45) BS02 AZM 4.2.1.1 GO:0004089 ... P23589 7479916 BindingDB: Ki=60nM
    608 1dog:A (2.3) BS11 NOJ 3.2.1.3 GO:0004339 ... P69327 8431441 MOAD: Ki=96uM
    609 1dog:A (2.3) BS12 NOJ 3.2.1.3 GO:0004339 ... P69327 8431441 MOAD: Ki=96uM
    610 1doh:A (2.1) BS02 NID 1.1.1.252 GO:0005575 ... Q12634 11342131 MOAD: Ki=2.4nM
    611 1doh:B (2.1) BS02 NID 1.1.1.252 GO:0005575 ... Q12634 11342131 MOAD: Ki=2.4nM
    612 1doj:A (1.7) BS02 1Z0 3.4.21.5 GO:0004252 ... P00734 11053836 PDBbind: -logKd/Ki=8.96, Ki=1.1nM
    613 1dq8:A (2.1) BS02 MAH 1.1.1.34 GO:0004420 ... P04035 10698924 BindingDB: Ki=23.5nM, IC50=4000nM
    614 1dq8:A (2.1) BS03 MAH 1.1.1.34 GO:0004420 ... P04035 10698924 BindingDB: Ki=23.5nM, IC50=4000nM
    615 1dq8:B (2.1) BS01 MAH 1.1.1.34 GO:0004420 ... P04035 10698924 BindingDB: Ki=23.5nM, IC50=4000nM
    616 1dq8:B (2.1) BS03 MAH 1.1.1.34 GO:0004420 ... P04035 10698924 BindingDB: Ki=23.5nM, IC50=4000nM
    617 1dq8:C (2.1) BS02 MAH 1.1.1.34 GO:0004420 ... P04035 10698924 BindingDB: Ki=23.5nM, IC50=4000nM
    618 1dq8:C (2.1) BS03 MAH 1.1.1.34 GO:0004420 ... P04035 10698924 BindingDB: Ki=23.5nM, IC50=4000nM
    619 1dq8:D (2.1) BS02 MAH 1.1.1.34 GO:0004420 ... P04035 10698924 BindingDB: Ki=23.5nM, IC50=4000nM
    620 1dq8:D (2.1) BS03 MAH 1.1.1.34 GO:0004420 ... P04035 10698924 BindingDB: Ki=23.5nM, IC50=4000nM
    621 1dqa:A (2.0) BS02 MAH 1.1.1.34 GO:0004420 ... P04035 10698924 BindingDB: Ki=23.5nM, IC50=4000nM
    622 1dqa:A (2.0) BS04 MAH 1.1.1.34 GO:0004420 ... P04035 10698924 BindingDB: Ki=23.5nM, IC50=4000nM
    623 1dqa:B (2.0) BS01 MAH 1.1.1.34 GO:0004420 ... P04035 10698924 BindingDB: Ki=23.5nM, IC50=4000nM
    624 1dqa:B (2.0) BS04 MAH 1.1.1.34 GO:0004420 ... P04035 10698924 BindingDB: Ki=23.5nM, IC50=4000nM
    625 1dqa:C (2.0) BS03 MAH 1.1.1.34 GO:0004420 ... P04035 10698924 BindingDB: Ki=23.5nM, IC50=4000nM
    626 1dqa:C (2.0) BS04 MAH 1.1.1.34 GO:0004420 ... P04035 10698924 BindingDB: Ki=23.5nM, IC50=4000nM
    627 1dqa:D (2.0) BS02 MAH 1.1.1.34 GO:0004420 ... P04035 10698924 BindingDB: Ki=23.5nM, IC50=4000nM
    628 1dqa:D (2.0) BS04 MAH 1.1.1.34 GO:0004420 ... P04035 10698924 BindingDB: Ki=23.5nM, IC50=4000nM
    629 1dqn:A (1.75) BS02 IMU 2.4.2.8 GO:0000166 ... Q24973 10841757 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    630 1dqn:B (1.75) BS01 IMU 2.4.2.8 GO:0000166 ... Q24973 10841757 MOAD: Ki=10nM
    631 1dqr:A (2.5) BS01 6PG 5.3.1.9 GO:0004347 ... Q9N1E2 10653639 MOAD: Ki=43uM
    632 1dqr:B (2.5) BS01 6PG 5.3.1.9 GO:0004347 ... Q9N1E2 10653639 MOAD: Ki=43uM
    633 1dqx:A (2.4) BS01 BMP 4.1.1.23 GO:0004590 ... P03962 10681417 MOAD: Ki=9pM
    PDBbind: -logKd/Ki=11.05, Ki=9pM
    BindingDB: Ki=0.0090nM
    634 1dqx:A (2.4) BS02 BMP 4.1.1.23 GO:0004590 ... P03962 10681417 MOAD: Ki=9pM
    PDBbind: -logKd/Ki=11.05, Ki=9pM
    BindingDB: Ki=0.0090nM
    635 1dqx:B (2.4) BS01 BMP 4.1.1.23 GO:0004590 ... P03962 10681417 MOAD: Ki=9pM
    PDBbind: -logKd/Ki=11.05, Ki=9pM
    BindingDB: Ki=0.0090nM
    636 1dqx:B (2.4) BS02 BMP 4.1.1.23 GO:0004590 ... P03962 10681417 MOAD: Ki=9pM
    PDBbind: -logKd/Ki=11.05, Ki=9pM
    BindingDB: Ki=0.0090nM
    637 1dqx:C (2.4) BS01 BMP 4.1.1.23 GO:0004590 ... P03962 10681417 MOAD: Ki=9pM
    BindingDB: Ki=0.0090nM
    638 1dqx:C (2.4) BS02 BMP 4.1.1.23 GO:0004590 ... P03962 10681417 MOAD: Ki=9pM
    BindingDB: Ki=0.0090nM
    639 1dqx:D (2.4) BS01 BMP 4.1.1.23 GO:0004590 ... P03962 10681417 MOAD: Ki=9pM
    BindingDB: Ki=0.0090nM
    640 1dqx:D (2.4) BS02 BMP 4.1.1.23 GO:0004590 ... P03962 10681417 MOAD: Ki=9pM
    BindingDB: Ki=0.0090nM
    641 1dra:A (1.9) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 1998681 BindingDB: IC50=8.8nM, EC50=1nM
    642 1dra:B (1.9) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 1998681 BindingDB: IC50=8.8nM, EC50=1nM
    643 1drb:A (1.96) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 1998681 BindingDB: IC50=8.8nM, EC50=1nM
    644 1drb:B (1.96) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 1998681 BindingDB: IC50=8.8nM, EC50=1nM
    645 1dre:A (2.6) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 9012674 BindingDB: IC50=8.8nM, EC50=1nM
    646 1drh:A (2.3) BS01 NAP 1.5.1.3 GO:0004146 ... P0ABQ4 7873554 MOAD: Kd=24uM
    647 1drj:A (2.5) BS01 RIP ? GO:0005515 ... P02925 7982928 MOAD: Kd=0.04uM
    PDBbind: -logKd/Ki=7.40, Kd=0.040uM
    648 1drk:A (2.0) BS01 RIP ? GO:0005515 ... P02925 7982928 MOAD: Kd=0.15uM
    PDBbind: -logKd/Ki=6.82, Kd=0.15uM
    649 1dru:A (2.2) BS01 NAD 1.17.1.8 GO:0005737 ... P04036 8873595 MOAD: Kd=0.46uM
    650 1drv:A (2.2) BS01 A3D 1.17.1.8 GO:0005737 ... P04036 8873595 MOAD: Kd=0.29uM
    PDBbind: -logKd/Ki=6.54, Kd=0.29uM
    651 1drw:A (2.2) BS01 NHD 1.17.1.8 GO:0005737 ... P04036 8873595 MOAD: Kd=1.48uM
    652 1dth:A (2.0) BS03 BAT 3.4.24.42 GO:0004222 ... P15167 8610113 MOAD: ic50=6nM
    PDBbind: -logKd/Ki=8.22, IC50=6nM
    653 1dth:B (2.0) BS03 BAT 3.4.24.42 GO:0004222 ... P15167 8610113 MOAD: ic50=6nM
    654 1dtq:A (2.8) BS01 FPT 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 10681546 PDBbind: -logKd/Ki=8.22, IC50=6nM
    655 1dtt:A (3.0) BS01 FTC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 10681546 PDBbind: -logKd/Ki=8.30, IC50=5nM
    656 1du0:A (2.0) BS01 dna ? GO:0000981 ... P02836 10889025 PDBbind: Kd=79pM
    657 1du0:A (2.0) BS02 dna ? GO:0000981 ... P02836 10889025 PDBbind: Kd=79pM
    658 1du0:B (2.0) BS01 dna ? GO:0000981 ... P02836 10889025 PDBbind: Kd=79pM
    659 1du0:B (2.0) BS02 dna ? GO:0000981 ... P02836 10889025 PDBbind: Kd=79pM
    660 1dub:A (2.5) BS01 CAA 4.2.1.17
    5.3.3.8    		 GO:0003824 ... P14604 8895557 MOAD: Ki=1.6uM
    PDBbind: -logKd/Ki=5.80, Ki=1.6uM
    661 1dub:A (2.5) BS02 CAA 4.2.1.17
    5.3.3.8    		 GO:0003824 ... P14604 8895557 MOAD: Ki=1.6uM
    PDBbind: -logKd/Ki=5.80, Ki=1.6uM
    662 1dub:B (2.5) BS01 CAA 4.2.1.17
    5.3.3.8    		 GO:0003824 ... P14604 8895557 MOAD: Ki=1.6uM
    PDBbind: -logKd/Ki=5.80, Ki=1.6uM
    663 1dub:B (2.5) BS02 CAA 4.2.1.17
    5.3.3.8    		 GO:0003824 ... P14604 8895557 MOAD: Ki=1.6uM
    PDBbind: -logKd/Ki=5.80, Ki=1.6uM
    664 1dub:C (2.5) BS01 CAA 4.2.1.17
    5.3.3.8    		 GO:0003824 ... P14604 8895557 MOAD: Ki=1.6uM
    665 1dub:C (2.5) BS02 CAA 4.2.1.17
    5.3.3.8    		 GO:0003824 ... P14604 8895557 MOAD: Ki=1.6uM
    666 1dub:E (2.5) BS01 CAA 4.2.1.17
    5.3.3.8    		 GO:0003824 ... P14604 8895557 MOAD: Ki=1.6uM
    667 1dub:F (2.5) BS01 CAA 4.2.1.17
    5.3.3.8    		 GO:0003824 ... P14604 8895557 MOAD: Ki=1.6uM
    668 1dub:F (2.5) BS02 CAA 4.2.1.17
    5.3.3.8    		 GO:0003824 ... P14604 8895557 MOAD: Ki=1.6uM
    669 1duv:G (1.7) BS01 PSQ 2.1.3.3 GO:0004585 ... P04391 10747936 MOAD: Kd=1.6pM
    PDBbind: -logKd/Ki=11.80, Kd=1.6pM
    670 1duv:H (1.7) BS01 PSQ 2.1.3.3 GO:0004585 ... P04391 10747936 MOAD: Kd=1.6pM
    671 1duv:I (1.7) BS01 PSQ 2.1.3.3 GO:0004585 ... P04391 10747936 MOAD: Kd=1.6pM
    PDBbind: -logKd/Ki=11.80, Kd=1.6pM
    672 1dvj:A (1.5) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 10681441 MOAD: Ki=0.51mM
    BindingDB: Ki=12400nM
    673 1dvj:B (1.5) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 10681441 MOAD: Ki=0.51mM
    BindingDB: Ki=12400nM
    674 1dvj:C (1.5) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 10681441 MOAD: Ki=0.51mM
    BindingDB: Ki=12400nM
    675 1dvj:D (1.5) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 10681441 MOAD: Ki=0.51mM
    BindingDB: Ki=12400nM
    676 1dvs:A (2.0) BS01 STL ? GO:0005179 ... P02766 10742177 BindingDB: Kd=470nM
    677 1dvx:A (2.0) BS01 DIF ? GO:0005179 ... P02766 10742177 BindingDB: Kd=1000nM, IC50=140000nM
    678 1dvz:A (1.9) BS01 OFL ? GO:0005179 ... P02766 10742177 MOAD: Kd=78nM
    679 1dwc:H (3.0) BS03 MIT 3.4.21.5 GO:0004252 ... P00734 1939071 PDBbind: -logKd/Ki=7.41, Ki=39nM
    680 1dwd:H (3.0) BS03 MID 3.4.21.5 GO:0004252 ... P00734 1939071 PDBbind: -logKd/Ki=8.18, Ki=6.6nM
    BindingDB: Ki=6nM, IC50=690nM, EC50=750nM
    681 1dx6:A (2.3) BS01 GNT 3.1.1.7 GO:0001507 ... P04058 10606746 MOAD: ic50=652nM
    PDBbind: -logKd/Ki=6.19, IC50=652nM
    BindingDB: IC50=1069nM, Ki=1.9e+2nM
    682 1dy4:A (1.9) BS01 SNP 3.2.1.91 GO:0004553 ... P62694 11114249 MOAD: Ki=44uM
    PDBbind: -logKd/Ki=4.36, Ki=44uM
    683 1dyr:A (1.86) BS02 TOP 1.5.1.3 GO:0004146 ... P16184 7866743 MOAD: ic50=20uM
    BindingDB: IC50=12000nM, Ki=280000nM
    684 1dzj:A (2.0) BS01 SES ? GO:0005549 ... P81245 10864504 MOAD: ic50=1.3uM
    PDBbind: -logKd/Ki=5.89, IC50=1.3uM
    685 1dzj:B (2.0) BS01 SES ? GO:0005549 ... P81245 10864504 MOAD: ic50=1.3uM
    686 1dzk:A (1.48) BS01 PRZ ? GO:0005549 ... P81245 10864504 MOAD: Kd=0.8uM
    PDBbind: -logKd/Ki=6.10, Kd=0.8uM
    687 1dzm:A (1.93) BS01 BZM ? GO:0005549 ... P81245 10864504 MOAD: ic50=3.9uM
    PDBbind: -logKd/Ki=5.41, IC50=3.9uM
    688 1dzm:B (1.93) BS01 BZM ? GO:0005549 ... P81245 10864504 MOAD: ic50=3.9uM
    689 1dzp:A (1.83) BS01 BZQ ? GO:0005549 ... P81245 10864504 MOAD: ic50=3.6uM
    690 1dzp:B (1.83) BS01 BZQ ? GO:0005549 ... P81245 10864504 MOAD: ic50=3.6uM
    PDBbind: -logKd/Ki=5.44, IC50=3.6uM
    691 1e00:A (1.83) BS01 DHM ? GO:0005549 ... P81245 10864504 MOAD: ic50=0.8uM
    PDBbind: -logKd/Ki=6.10, IC50=0.8uM
    692 1e00:B (1.83) BS01 DHM ? GO:0005549 ... P81245 10864504 MOAD: ic50=0.8uM
    693 1e02:A (2.15) BS01 UNA ? GO:0005549 ... P81245 10864504 MOAD: ic50=0.7uM
    PDBbind: -logKd/Ki=6.15, IC50=0.7uM
    694 1e02:B (2.15) BS01 UNA ? GO:0005549 ... P81245 10864504 MOAD: ic50=0.7uM
    695 1e06:A (2.12) BS01 IPB ? GO:0005549 ... P81245 10864504 MOAD: ic50=2.5uM
    PDBbind: -logKd/Ki=5.60, IC50=2.5uM
    696 1e06:B (2.12) BS01 IPB ? GO:0005549 ... P81245 10864504 MOAD: ic50=2.5uM
    697 1e1v:A (1.95) BS01 CMG 2.7.11.22 GO:0000082 ... P24941 10956187 MOAD: Ki=12uM
    PDBbind: -logKd/Ki=4.92, Ki=12uM
    BindingDB: IC50=17000nM
    698 1e1x:A (1.85) BS01 NW1 2.7.11.22 GO:0000082 ... P24941 10956187 MOAD: Ki=1.3uM
    PDBbind: -logKd/Ki=5.89, Ki=1.3uM
    BindingDB: IC50=2200nM, Ki=1300nM
    699 1e1y:A (2.23) BS01 CPB 2.4.1.1 GO:0000166 ... P00489 10924512 MOAD: ic50=2.5uM
    PDBbind: -logKd/Ki=5.60, IC50=2.5uM
    BindingDB: IC50=1200nM
    700 1e2k:A (1.7) BS01 TMC 2.7.1.21 GO:0004797 ... P0DTH5 10924157 MOAD: Ki=11.4uM
    PDBbind: -logKd/Ki=4.94, Ki=11.4uM
    701 1e2k:B (1.7) BS01 TMC 2.7.1.21 GO:0004797 ... P0DTH5 10924157 MOAD: Ki=11.4uM
    702 1e2l:A (2.4) BS01 TMC 2.7.1.21 GO:0004797 ... P0DTH5 10924157 MOAD: Ki=51.5uM
    PDBbind: -logKd/Ki=4.29, Ki=51.5uM
    703 1e2l:B (2.4) BS01 TMC 2.7.1.21 GO:0004797 ... P0DTH5 10924157 MOAD: Ki=51.5uM
    704 1e2n:A (2.2) BS01 RCA 2.7.1.21 GO:0004797 ... P0DTH5 11266595 MOAD: Ki=30.9uM
    705 1e2n:B (2.2) BS01 RCA 2.7.1.21 GO:0004797 ... P0DTH5 11266595 MOAD: Ki=30.9uM
    706 1e2p:A (2.5) BS01 CCV 2.7.1.21 GO:0004797 ... P0DTH5 11266595 MOAD: Ki=27uM
    707 1e2p:B (2.5) BS01 CCV 2.7.1.21 GO:0004797 ... P0DTH5 11266595 MOAD: Ki=27uM
    708 1e34:B (1.8) BS02 TPX 3.4.21.36 GO:0004252 ... P00772 11023818 PDBbind: -logKd/Ki=2.88, Ki=1.32mM
    709 1e37:B (1.75) BS02 TPY 3.4.21.36 GO:0004252 ... P00772 11023818 PDBbind: -logKd/Ki=3.70, Ki=0.20mM
    710 1e3g:A (2.4) BS01 R18 ? N/A P10275 10840043 PDBbind: -logKd/Ki=9.00, Kd=0.99nM
    BindingDB: Kd=0.99nM, IC50=0.302000nM, EC50=0.013000nM, Ki=0.400000nM
    711 1e3k:A (2.8) BS01 R18 ? N/A P06401 10840043 BindingDB: Ki=0.490000nM
    712 1e3k:B (2.8) BS01 R18 ? N/A P06401 10840043 BindingDB: Ki=0.490000nM
    713 1e3v:A (2.0) BS01 DXC 5.3.3.1 GO:0004769 ... P07445 11007792 MOAD: Kd=45.74uM
    PDBbind: -logKd/Ki=4.34, Kd=45.74uM
    714 1e3v:B (2.0) BS01 DXC 5.3.3.1 GO:0004769 ... P07445 11007792 MOAD: Kd=45.74uM
    715 1e4h:A (1.8) BS01 PBR ? GO:0005179 ... P02766 10957627 MOAD: Kd=3.9nM
    PDBbind: -logKd/Ki=8.41, Kd=3.9nM
    716 1e4h:B (1.8) BS01 PBR ? GO:0005179 ... P02766 10957627 MOAD: Kd=3.9nM
    PDBbind: -logKd/Ki=8.41, Kd=3.9nM
    717 1e55:A (2.0) BS01 BGC 3.2.1.182
    3.2.1.21    		 GO:0004553 ... P49235 11106394 PDBbind: -logKd/Ki=4.12, Ki=76uM
    718 1e55:A (2.0) BS02 DHR 3.2.1.182
    3.2.1.21    		 GO:0004553 ... P49235 11106394 MOAD: Ki=76uM
    PDBbind: -logKd/Ki=4.12, Ki=76uM
    719 1e55:B (2.0) BS02 DHR 3.2.1.182
    3.2.1.21    		 GO:0004553 ... P49235 11106394 MOAD: Ki=76uM
    720 1e5a:A (1.8) BS01 TBP ? GO:0005179 ... P02766 10957627 MOAD: Kd=23nM
    PDBbind: -logKd/Ki=7.64, Kd=23nM
    721 1e5a:B (1.8) BS01 TBP ? GO:0005179 ... P02766 10957627 MOAD: Kd=23nM
    PDBbind: -logKd/Ki=7.64, Kd=23nM
    722 1e5j:A (1.85) BS01 SGC 3.2.1.4 GO:0000272 ... O85465 11828460 PDBbind: -logKd/Ki=4.00, Ki=100uM
    723 1e5j:A (1.85) BS02 SGC 3.2.1.4 GO:0000272 ... O85465 11828460 PDBbind: -logKd/Ki=4.00, Ki=100uM
    724 1e5j:A (1.85) BS03 GLC 3.2.1.4 GO:0000272 ... O85465 11828460 PDBbind: -logKd/Ki=4.00, Ki=100uM
    725 1e66:A (2.1) BS01 HUX 3.1.1.7 GO:0001507 ... P04058 11863435 MOAD: Ki=0.13nM
    PDBbind: -logKd/Ki=9.89, Ki=0.13nM
    726 1e6q:M (1.35) BS01 NTZ 3.2.1.147 GO:0004553 ... P29736 10978344 MOAD: Ki=0.7mM
    PDBbind: -logKd/Ki=3.15, Ki=0.7mM
    727 1e6s:M (1.35) BS01 GOX 3.2.1.147 GO:0004553 ... P29736 10978344 MOAD: Ki=0.6mM
    PDBbind: -logKd/Ki=3.22, Ki=0.6mM
    728 1e72:M (1.6) BS02 GOX 3.2.1.147 GO:0004553 ... P29736 10978344 MOAD: Ki=0.6mM
    PDBbind: -logKd/Ki=3.22, Ki=0.6mM
    729 1e7b:A (2.38) BS01 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    730 1e7b:A (2.38) BS02 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    731 1e7b:B (2.38) BS01 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    732 1e7b:B (2.38) BS02 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    733 1e7b:B (2.38) BS03 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    734 1e7c:A (2.4) BS01 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    735 1e7c:A (2.4) BS02 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    736 1e7c:A (2.4) BS03 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    737 1e7c:A (2.4) BS04 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    738 1e7c:A (2.4) BS05 HLT ? GO:0003677 ... P02768 10940303 BindingDB: IC50=2900000nM
    739 1e7j:A () BS01 dna ? N/A N/A N/A PDBbind: Kd=1uM
    740 1e7j:A () BS02 dna ? N/A N/A N/A PDBbind: Kd=1uM
    741 1e7w:A (1.75) BS02 MTX 1.5.1.33 GO:0004155 ... Q01782 11373620 BindingDB: Ki=180nM
    742 1e7w:B (1.75) BS02 MTX 1.5.1.33 GO:0004155 ... Q01782 11373620 BindingDB: Ki=180nM
    743 1e8g:A (2.1) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 10984479 MOAD: Kd=1.8uM
    744 1e8g:B (2.1) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 10984479 MOAD: Kd=1.8uM
    745 1e8h:A (2.6) BS01 ADP 1.1.3.38 GO:0003824 ... P56216 10984479 PDBbind: -logKd/Ki=5.68, Kd=2.1uM
    746 1e96:A (2.4) BS01 GTP 3.6.5.2 GO:0001764 ... P63000 11090627 MOAD: Kd=2.7uM
    747 1e9h:A (2.5) BS01 INR 2.7.11.22 GO:0000082 ... P24941 11377199 MOAD: ic50=35nM
    PDBbind: -logKd/Ki=7.46, IC50=35nM
    BindingDB: IC50=3e+2nM
    748 1e9h:C (2.5) BS01 INR 2.7.11.22 GO:0000082 ... P24941 11377199 MOAD: ic50=35nM
    BindingDB: IC50=3e+2nM
    749 1eas:A (1.8) BS01 TFK 3.4.21.36 GO:0004252 ... P00772 7932559 PDBbind: -logKd/Ki=7.74, Ki=18nM
    750 1eat:A (2.0) BS01 TFI 3.4.21.36 GO:0004252 ... P00772 7837246 PDBbind: -logKd/Ki=7.82, Ki=15nM
    751 1eb2:A (2.0) BS02 BPO 3.4.21.4 GO:0004175 ... P00760 11881991 MOAD: Ki=16nM
    PDBbind: -logKd/Ki=6.01, Ki=980nM
    BindingDB: Ki=980nM
    752 1ebg:A (2.1) BS02 PAH 4.2.1.11 GO:0000015 ... P00924 8049235 MOAD: Ki=15pM
    PDBbind: -logKd/Ki=10.82, Ki=15pM
    753 1ebg:B (2.1) BS02 PAH 4.2.1.11 GO:0000015 ... P00924 8049235 MOAD: Ki=15pM
    754 1ebw:A (1.81) BS01 BEI 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 MOAD: Ki=0.9nM
    PDBbind: -logKd/Ki=9.05, Ki=0.90nM
    755 1ebw:B (1.81) BS01 BEI 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 PDBbind: -logKd/Ki=9.05, Ki=0.90nM
    756 1eby:A (2.294) BS01 BEB 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 PDBbind: -logKd/Ki=9.70, Ki=0.20nM
    757 1eby:B (2.294) BS01 BEB 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 MOAD: Ki=0.2nM
    PDBbind: -logKd/Ki=9.70, Ki=0.20nM
    758 1ebz:A (2.01) BS01 BEC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 PDBbind: -logKd/Ki=9.40, Ki=0.40nM
    759 1ebz:B (2.01) BS01 BEC 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 MOAD: Ki=0.4nM
    PDBbind: -logKd/Ki=9.40, Ki=0.40nM
    760 1ec0:A (1.79) BS01 BED 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 15560801 MOAD: Ki=3.2nM
    PDBbind: -logKd/Ki=8.49, Ki=3.2nM
    761 1ec0:B (1.79) BS01 BED 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 15560801 PDBbind: -logKd/Ki=8.49, Ki=3.2nM
    762 1ec1:A (2.1) BS01 BEE 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 MOAD: Ki=1.2nM
    PDBbind: -logKd/Ki=8.92, Ki=1.20nM
    763 1ec1:B (2.1) BS01 BEE 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 PDBbind: -logKd/Ki=8.92, Ki=1.20nM
    764 1ec2:A (2.0) BS01 BEJ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 PDBbind: -logKd/Ki=10.00, Ki=0.10nM
    765 1ec2:B (2.0) BS01 BEJ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 MOAD: Ki=0.1nM
    PDBbind: -logKd/Ki=10.00, Ki=0.10nM
    766 1ec3:A (1.8) BS01 MS3 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 MOAD: Ki=0.92nM
    PDBbind: -logKd/Ki=9.04, Ki=0.92nM
    767 1ec3:B (1.8) BS01 MS3 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 12694187 PDBbind: -logKd/Ki=9.04, Ki=0.92nM
    768 1ec9:A (2.0) BS02 XYH 4.2.1.40 GO:0000287 ... P0AES2 10769114 MOAD: Ki=0.8mM
    PDBbind: -logKd/Ki=3.10, Ki=0.8mM
    769 1ec9:B (2.0) BS02 XYH 4.2.1.40 GO:0000287 ... P0AES2 10769114 MOAD: Ki=0.8mM
    770 1ec9:C (2.0) BS02 XYH 4.2.1.40 GO:0000287 ... P0AES2 10769114 MOAD: Ki=0.8mM
    771 1ec9:D (2.0) BS02 XYH 4.2.1.40 GO:0000287 ... P0AES2 10769114 MOAD: Ki=0.8mM
    772 1ecm:A (2.2) BS01 TSA 4.2.1.51
    5.4.99.5    		 GO:0004106 ... P0A9J8 N/A MOAD: Kd=2.8uM
    773 1ecm:B (2.2) BS01 TSA 4.2.1.51
    5.4.99.5    		 GO:0004106 ... P0A9J8 N/A MOAD: Kd=2.8uM
    774 1ecq:A (2.0) BS01 DXG 4.2.1.40 GO:0000287 ... P0AES2 10769114 MOAD: Ki=1mM
    PDBbind: -logKd/Ki=3.00, Ki=1.0mM
    775 1ecq:B (2.0) BS01 DXG 4.2.1.40 GO:0000287 ... P0AES2 10769114 MOAD: Ki=1mM
    776 1ecq:C (2.0) BS01 DXG 4.2.1.40 GO:0000287 ... P0AES2 10769114 MOAD: Ki=1mM
    777 1ecq:D (2.0) BS01 DXG 4.2.1.40 GO:0000287 ... P0AES2 10769114 MOAD: Ki=1mM
    778 1ecv:A (1.95) BS01 878 3.1.3.48 GO:0004725 ... P18031 10702277 MOAD: Ki=14uM
    PDBbind: -logKd/Ki=4.85, Ki=14uM
    BindingDB: Ki=71449632607551nM
    779 1ed4:A (1.86) BS03 IPU 1.14.13.39 GO:0004517 ... P29473 11051558 MOAD: Ki=0.022uM
    780 1ed4:A (1.86) BS04 IPU 1.14.13.39 GO:0004517 ... P29473 11051558 MOAD: Ki=0.022uM
    781 1ed4:A (1.86) BS05 IPU 1.14.13.39 GO:0004517 ... P29473 11051558 MOAD: Ki=0.022uM
    782 1ed4:B (1.86) BS02 IPU 1.14.13.39 GO:0004517 ... P29473 11051558 MOAD: Ki=0.022uM
    783 1ed4:B (1.86) BS03 IPU 1.14.13.39 GO:0004517 ... P29473 11051558 MOAD: Ki=0.022uM
    784 1ed4:B (1.86) BS05 IPU 1.14.13.39 GO:0004517 ... P29473 11051558 MOAD: Ki=0.022uM
    785 1ed5:A (1.8) BS02 NRG 1.14.13.39 GO:0004517 ... P29473 11695891 BindingDB: IC50=1200nM, Ki=750nM
    786 1ed5:B (1.8) BS03 NRG 1.14.13.39 GO:0004517 ... P29473 11695891 BindingDB: IC50=1200nM, Ki=750nM
    787 1eed:P (2.0) BS01 0EO 3.4.23.22 GO:0004190 ... P11838 1525155 MOAD: Ki=16.2uM
    PDBbind: -logKd/Ki=4.79, Ki=16.2uM
    788 1eef:D (1.8) BS01 GLA ? GO:0005576 ... P32890 11173465 MOAD: ic50=1.2mM
    789 1eef:E (1.8) BS01 GLA ? GO:0005576 ... P32890 11173465 MOAD: ic50=1.2mM
    790 1eef:F (1.8) BS01 GLA ? GO:0005576 ... P32890 11173465 MOAD: ic50=1.2mM
    791 1eef:G (1.8) BS01 GLA ? GO:0005576 ... P32890 11173465 PDBbind: -logKd/Ki=2.92, IC50=1.2mM
    792 1eef:G (1.8) BS02 I06 ? GO:0005576 ... P32890 11173465 PDBbind: -logKd/Ki=2.92, IC50=1.2mM
    793 1eef:H (1.8) BS01 GLA ? GO:0005576 ... P32890 11173465 PDBbind: -logKd/Ki=2.92, IC50=1.2mM
    794 1eef:H (1.8) BS02 I06 ? GO:0005576 ... P32890 11173465 PDBbind: -logKd/Ki=2.92, IC50=1.2mM
    795 1eef:L (1.8) BS01 GLA ? GO:0005576 ... P32890 11173465 MOAD: ic50=1.2mM
    796 1eef:M (1.8) BS01 GLA ? GO:0005576 ... P32890 11173465 MOAD: ic50=1.2mM
    797 1eef:N (1.8) BS01 GLA ? GO:0005576 ... P32890 11173465 MOAD: ic50=1.2mM
    798 1eei:D (2.0) BS01 GAA ? GO:0005576 ... Q57193 11173465 MOAD: ic50=0.7mM
    PDBbind: -logKd/Ki=3.15, IC50=0.7mM
    799 1eei:E (2.0) BS01 GAA ? GO:0005576 ... Q57193 11173465 MOAD: ic50=0.7mM
    PDBbind: -logKd/Ki=3.15, IC50=0.7mM
    800 1eei:F (2.0) BS01 GAA ? GO:0005576 ... Q57193 11173465 MOAD: ic50=0.7mM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218