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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    7401 2gij:B (1.93) BS01 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.42nM
    7402 2gij:B (1.93) BS02 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.42nM
    7403 2giq:A (1.65) BS01 NN2 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 16731953 MOAD: ic50=131nM
    7404 2giq:B (1.65) BS01 NN2 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 16731953 MOAD: ic50=131nM
    7405 2gir:A (1.9) BS01 NN3 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 16731953 MOAD: ic50=140nM
    BindingDB: IC50=9nM
    7406 2gir:B (1.9) BS01 NN3 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 16731953 MOAD: ic50=140nM
    BindingDB: IC50=9nM
    7407 2giu:A (2.2) BS01 FBR ? GO:0003677 ... Q92731 16632357 MOAD: ic50=1.5nM
    PDBbind: -logKd/Ki=8.82, IC50=1.5nM
    BindingDB: IC50=1.8nM, EC50=4nM
    7408 2gj4:A (1.6) BS02 2TH 2.4.1.1 GO:0000166 ... P00489 16945526 MOAD: ic50=319nM
    PDBbind: -logKd/Ki=6.50, IC50=319nM
    7409 2gj5:A (2.4) BS01 VD3 ? GO:0005515 ... P02754 18004750 MOAD: Kd=4.74nM
    PDBbind: -logKd/Ki=8.32, Kd=4.74nM
    7410 2gj5:A (2.4) BS02 VD3 ? GO:0005515 ... P02754 18004750 MOAD: Kd=4.74nM
    PDBbind: -logKd/Ki=8.32, Kd=4.74nM
    7411 2gje:A (3.37) BS01 rna ? GO:0003677 ... Q952G2 16923390 PDBbind: Kd=7nM
    7412 2gje:D (3.37) BS01 rna ? GO:0003677 ... P90629 16923390 PDBbind: Kd=7nM
    7413 2gk1:I (3.25) BS01 NGT 3.2.1.52 GO:0004553 ... P06865 16698036 BindingDB: Ki=270nM
    7414 2gk1:J (3.25) BS01 NGT 3.2.1.52 GO:0004553 ... P06865 16698036 BindingDB: Ki=270nM
    7415 2gk1:K (3.25) BS01 NGT 3.2.1.52 GO:0004553 ... P06865 16698036 BindingDB: Ki=270nM
    7416 2gk1:L (3.25) BS01 NGT 3.2.1.52 GO:0004553 ... P06865 16698036 BindingDB: Ki=270nM
    7417 2gk1:N (3.25) BS01 NGT 3.2.1.52 GO:0004553 ... P07686 16698036 BindingDB: Ki=190nM
    7418 2gk1:O (3.25) BS01 NGT 3.2.1.52 GO:0004553 ... P07686 16698036 BindingDB: Ki=190nM
    7419 2gk1:P (3.25) BS01 NGT 3.2.1.52 GO:0004553 ... P07686 16698036 BindingDB: Ki=190nM
    7420 2gk1:R (3.25) BS01 NGT 3.2.1.52 GO:0004553 ... P07686 16698036 BindingDB: Ki=190nM
    7421 2gk1:T (3.25) BS01 NGT 3.2.1.52 GO:0004553 ... P07686 16698036 BindingDB: Ki=190nM
    7422 2gkd:A (-1.00) BS01 dna ? N/A Q8KNF0 17168523 PDBbind: Kd=14uM
    7423 2gkd:A (-1.00) BS02 dna ? N/A Q8KNF0 17168523 PDBbind: Kd=14uM
    7424 2gkl:A (1.86) BS02 PD2 3.5.2.6 GO:0008270 ... P26918 17307979 MOAD: Ki=4.5uM
    PDBbind: -logKd/Ki=5.35, Ki=4.5uM
    7425 2gl0:A (2.25) BS01 ADN 2.7.1.20 GO:0000166 ... Q8ZVF7 16737961 MOAD: Kd=15uM
    PDBbind: -logKd/Ki=4.82, Kd=15uM
    7426 2gl0:B (2.25) BS01 ADN 2.7.1.20 GO:0000166 ... Q8ZVF7 16737961 MOAD: Kd=15uM
    PDBbind: -logKd/Ki=4.82, Kd=15uM
    7427 2gl0:C (2.25) BS01 ADN 2.7.1.20 GO:0000166 ... Q8ZVF7 16737961 MOAD: Kd=15uM
    7428 2gl0:C (2.25) BS02 ADN 2.7.1.20 GO:0000166 ... Q8ZVF7 16737961 MOAD: Kd=15uM
    7429 2gl0:D (2.25) BS01 ADN 2.7.1.20 GO:0000166 ... Q8ZVF7 16737961 MOAD: Kd=15uM
    7430 2gl0:E (2.25) BS01 ADN 2.7.1.20 GO:0000166 ... Q8ZVF7 16737961 MOAD: Kd=15uM
    PDBbind: -logKd/Ki=4.82, Kd=15uM
    7431 2gl0:F (2.25) BS01 ADN 2.7.1.20 GO:0000166 ... Q8ZVF7 16737961 MOAD: Kd=15uM
    7432 2glm:A (2.6) BS01 SCB 4.2.1.59 GO:0005737 ... O25928 18093984 PDBbind: -logKd/Ki=5.37, Ki=4.3uM
    7433 2glm:B (2.6) BS01 SCB 4.2.1.59 GO:0005737 ... O25928 18093984 PDBbind: -logKd/Ki=5.37, Ki=4.3uM
    7434 2glo:A (-1.00) BS01 dna ? N/A Q9XTN4 16876822 PDBbind: Kd=30nM
    7435 2glo:A (-1.00) BS02 dna ? N/A Q9XTN4 16876822 PDBbind: Kd=30nM
    7436 2glp:A (2.42) BS01 BDE 4.2.1.59 GO:0005737 ... O25928 18093984 MOAD: Ki=9.7uM
    BindingDB: IC50=39800nM
    7437 2glp:B (2.42) BS01 BDE 4.2.1.59 GO:0005737 ... O25928 18093984 BindingDB: IC50=39800nM
    7438 2glp:C (2.42) BS01 BDE 4.2.1.59 GO:0005737 ... O25928 18093984 MOAD: Ki=9.7uM
    PDBbind: -logKd/Ki=5.01, Ki=9.7uM
    BindingDB: IC50=39800nM
    7439 2glp:D (2.42) BS01 BDE 4.2.1.59 GO:0005737 ... O25928 18093984 PDBbind: -logKd/Ki=5.01, Ki=9.7uM
    BindingDB: IC50=39800nM
    7440 2gm1:A (2.3) BS02 2AZ ? GO:0003777 ... P52732 16730979 MOAD: ic50=0.1uM
    PDBbind: -logKd/Ki=7.00, IC50=0.10uM
    BindingDB: IC50=100nM
    7441 2gm1:B (2.3) BS02 2AZ ? GO:0003777 ... P52732 16730979 MOAD: ic50=0.1uM
    BindingDB: IC50=100nM
    7442 2gm1:D (2.3) BS02 2AZ ? GO:0003777 ... P52732 16730979 MOAD: ic50=0.1uM
    BindingDB: IC50=100nM
    7443 2gm1:E (2.3) BS03 2AZ ? GO:0003777 ... P52732 16730979 MOAD: ic50=0.1uM
    BindingDB: IC50=100nM
    7444 2gm9:A (2.3) BS02 3TH 2.4.1.1 GO:0000166 ... P00489 16945526 MOAD: ic50=41nM
    PDBbind: -logKd/Ki=7.39, IC50=41nM
    7445 2gmk:A (1.65) BS01 AMP 3.1.27.- GO:0003676 ... P22069 18001769 MOAD: Ki=590uM
    PDBbind: -logKd/Ki=3.23, Ki=590uM
    7446 2gmk:A (1.65) BS02 AMP 3.1.27.- GO:0003676 ... P22069 18001769 MOAD: Ki=590uM
    PDBbind: -logKd/Ki=3.23, Ki=590uM
    7447 2gmv:A (2.3) BS03 UN8 2.7.11.-
    4.1.1.32    		 GO:0000287 ... P35558 17532214 MOAD: ic50=0.63uM
    PDBbind: -logKd/Ki=6.20, IC50=0.63uM
    BindingDB: IC50=630nM
    7448 2gmx:A (3.5) BS02 877 2.7.11.24 GO:0004672 ... P45983 16759099 PDBbind: -logKd/Ki=7.11, IC50=77nM
    BindingDB: IC50=77nM
    7449 2gmx:B (3.5) BS02 877 2.7.11.24 GO:0004672 ... P45983 16759099 BindingDB: IC50=77nM
    7450 2gnf:A (2.28) BS02 Y27 2.7.11.11 GO:0001669 ... P00517 16699172 MOAD: ic50=6uM
    PDBbind: -logKd/Ki=5.22, IC50=6uM
    BindingDB: IC50=42000nM
    7451 2gnh:A (2.05) BS02 H52 2.7.11.11 GO:0001669 ... P00517 16699172 MOAD: ic50=149nM
    PDBbind: -logKd/Ki=6.83, IC50=149nM
    BindingDB: IC50=394nM
    7452 2gnh:A (2.05) BS03 H52 2.7.11.11 GO:0001669 ... P00517 16699172 MOAD: ic50=149nM
    PDBbind: -logKd/Ki=6.83, IC50=149nM
    BindingDB: IC50=394nM
    7453 2gni:A (2.27) BS02 M77 2.7.11.11 GO:0001669 ... P00517 16699172 MOAD: ic50=2280nM
    PDBbind: -logKd/Ki=5.64, IC50=2.28uM
    BindingDB: IC50=1494nM
    7454 2gnj:A (2.28) BS02 Y27 2.7.11.11 GO:0001669 ... P00517 16699172 MOAD: Ki=6uM
    PDBbind: -logKd/Ki=5.22, IC50=6uM
    BindingDB: IC50=42000nM
    7455 2gnl:A (2.6) BS02 H52 2.7.11.11 GO:0001669 ... P00517 16699172 PDBbind: -logKd/Ki=7.24, IC50=58nM
    BindingDB: IC50=394nM
    7456 2go4:A (2.7) BS04 TUX 3.5.1.108 GO:0006796 ... O67648 16800620 PDBbind: -logKd/Ki=5.15, IC50=7uM
    7457 2gpb:A (2.3) BS01 GLC 2.4.1.1 GO:0000166 ... P00489 2125493 MOAD: Ki=2mM
    7458 2gpp:A (2.6) BS02 1BA ? N/A P62508 16990259 PDBbind: -logKd/Ki=5.70, IC50=2.0uM
    7459 2gpu:A (1.7) BS01 OHT ? N/A P62508 16990259 BindingDB: IC50=1350nM, EC50=15nM
    7460 2gpv:A (2.85) BS02 OHT ? N/A P62508 16990259 BindingDB: IC50=1350nM, EC50=15nM
    7461 2gpv:B (2.85) BS02 OHT ? N/A P62508 16990259 BindingDB: IC50=1350nM, EC50=15nM
    7462 2gpv:C (2.85) BS02 OHT ? N/A P62508 16990259 BindingDB: IC50=1350nM, EC50=15nM
    7463 2gpv:D (2.85) BS01 OHT ? N/A P62508 16990259 BindingDB: IC50=1350nM, EC50=15nM
    7464 2gpv:E (2.85) BS01 OHT ? N/A P62508 16990259 BindingDB: IC50=1350nM, EC50=15nM
    7465 2gpv:F (2.85) BS01 OHT ? N/A P62508 16990259 BindingDB: IC50=1350nM, EC50=15nM
    7466 2gqg:A (2.4) BS01 1N1 2.7.10.2 GO:0004672 ... P00519 16740718 BindingDB: IC50=3.1nM, Kd=1.2nM, EC50=0.040000nM
    7467 2gqg:B (2.4) BS01 1N1 2.7.10.2 GO:0004672 ... P00519 16740718 BindingDB: IC50=3.1nM, Kd=1.2nM, EC50=0.040000nM
    7468 2gqn:A (1.8) BS01 BLP 4.4.1.13
    4.4.1.28    		 GO:0003824 ... P06721 17300162 PDBbind: -logKd/Ki=5.35, IC50=4.5uM
    7469 2gqx:A (2.1) BS02 5CL 1.14.15.1 GO:0004497 ... P00183 17962225 MOAD: Kd=1.71uM
    7470 2gsr:A (2.11) BS01 GTS 2.5.1.18 GO:0004364 ... P80031 7932743 MOAD: Ki=4uM
    7471 2gsr:B (2.11) BS01 GTS 2.5.1.18 GO:0004364 ... P80031 7932743 MOAD: Ki=4uM
    7472 2gss:A (1.9) BS01 EAA 2.5.1.18 GO:0000302 ... P09211 9012673 MOAD: Ki=11.5uM
    PDBbind: -logKd/Ki=4.94, Ki=11.5uM
    BindingDB: IC50=2.6e+4nM
    7473 2gss:B (1.9) BS01 EAA 2.5.1.18 GO:0000302 ... P09211 9012673 MOAD: Ki=11.5uM
    PDBbind: -logKd/Ki=4.94, Ki=11.5uM
    BindingDB: IC50=2.6e+4nM
    7474 2gst:A (1.8) BS01 GPS 2.5.1.18 GO:0004364 ... P04905 8110735 MOAD: Ki=0.85uM
    PDBbind: -logKd/Ki=6.07, Ki=0.85uM
    7475 2gst:B (1.8) BS01 GPS 2.5.1.18 GO:0004364 ... P04905 8110735 MOAD: Ki=0.85uM
    PDBbind: -logKd/Ki=6.07, Ki=0.85uM
    7476 2gsu:A (2.0) BS03 AMP N/A N/A N/A 16893180 MOAD: Ki=268uM
    PDBbind: -logKd/Ki=3.59, Ki=260uM
    7477 2gsu:B (2.0) BS03 AMP N/A N/A N/A 16893180 MOAD: Ki=268uM
    7478 2gtk:A (2.1) BS02 208 ? GO:0003677 ... P37231 16737814 MOAD: ic50=0.251uM
    PDBbind: -logKd/Ki=6.60, IC50=0.251uM
    BindingDB: EC50=760nM, IC50=251nM
    7479 2gtm:A (1.9) BS01 LID 2.7.11.24 GO:0000077 ... P47811 16750367 MOAD: ic50=542nM
    7480 2gtn:A (1.8) BS01 LIE 2.7.11.24 GO:0000077 ... P47811 16750367 MOAD: ic50=4nM
    7481 2gtv:X (-1.00) BS01 TSA 5.4.99.5 GO:0046417 ... Q57696 17994104 PDBbind: -logKd/Ki=5.15, Kd=7uM
    7482 2gu8:A (2.2) BS02 796 2.7.11.11 GO:0000287 ... P17612 16765046 MOAD: ic50=0.1nM
    PDBbind: -logKd/Ki=8.59, IC50=2.6nM
    BindingDB: IC50=0.100000nM
    7483 2gv6:A (2.1) BS01 730 3.4.21.109 GO:0004252 ... Q9Y5Y6 16821772 MOAD: Ki=0.046uM
    PDBbind: -logKd/Ki=7.34, Ki=46nM
    7484 2gv7:A (2.2) BS01 672 3.4.21.109 GO:0004252 ... Q9Y5Y6 16821772 MOAD: Ki=0.014uM
    PDBbind: -logKd/Ki=7.85, Ki=14nM
    BindingDB: Ki=14nM
    7485 2gvd:A (2.9) BS04 128 4.6.1.1 GO:0009190 ... P30803 16766715 PDBbind: -logKd/Ki=7.00, Ki=100nM
    7486 2gvd:B (2.9) BS02 128 4.6.1.1 GO:0009190 ... P26769 16766715 PDBbind: -logKd/Ki=7.00, Ki=100nM
    7487 2gvf:A (2.5) BS04 NHN 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0006508 ... P26664 16730985 PDBbind: -logKd/Ki=7.60, Ki=25nM
    7488 2gvj:A (2.1) BS01 DGB 2.4.2.12 GO:0005125 ... P43490 16783377 MOAD: Ki=0.3nM
    PDBbind: -logKd/Ki=9.52, Ki=0.3nM
    BindingDB: IC50=3.0nM, Ki=0.30nM
    7489 2gvj:B (2.1) BS01 DGB 2.4.2.12 GO:0005125 ... P43490 16783377 MOAD: Ki=0.3nM
    PDBbind: -logKd/Ki=9.52, Ki=0.3nM
    BindingDB: IC50=3.0nM, Ki=0.30nM
    7490 2gvv:A (1.73) BS03 DI9 3.8.2.2 GO:0005509 ... Q7SIG4 17002369 MOAD: Kd=400uM
    PDBbind: -logKd/Ki=3.90, Ki=125uM
    7491 2gvz:A (3.27) BS03 ONA 4.6.1.1 GO:0009190 ... P30803 16766715 PDBbind: -logKd/Ki=6.89, Ki=130nM
    7492 2gvz:B (3.27) BS02 ONA 4.6.1.1 GO:0009190 ... P26769 16766715 PDBbind: -logKd/Ki=6.89, Ki=130nM
    7493 2gyi:A (1.6) BS03 HYA 5.3.1.5 GO:0000287 ... P15587 7893671 MOAD: Ki<100nM
    PDBbind: -logKd/Ki=7.00, Ki<=100nM
    7494 2gyi:B (1.6) BS03 HYA 5.3.1.5 GO:0000287 ... P15587 7893671 MOAD: Ki<100nM
    PDBbind: -logKd/Ki=7.00, Ki<=100nM
    7495 2gz1:A (1.8) BS01 NAP 1.2.1.11 GO:0000166 ... A0A0H2UPS5 16895909 MOAD: Kd=6uM
    7496 2gz1:B (1.8) BS01 NAP 1.2.1.11 GO:0000166 ... A0A0H2UPS5 16895909 MOAD: Kd=6uM
    7497 2gz2:A (2.1) BS01 A2P 1.2.1.11 GO:0000166 ... A0A0H2UPS5 16895909 MOAD: Kd=6uM
    PDBbind: -logKd/Ki=5.22, Kd=6.0uM
    7498 2gz2:B (2.1) BS01 A2P 1.2.1.11 GO:0000166 ... A0A0H2UPS5 16895909 MOAD: Kd=6uM
    7499 2gz3:A (2.1) BS01 NAP 1.2.1.11 GO:0000166 ... A0A0H2UPS5 16895909 MOAD: Kd=6uM
    7500 2gz3:B (2.1) BS01 NAP 1.2.1.11 GO:0000166 ... A0A0H2UPS5 16895909 MOAD: Kd=6uM
    7501 2gz3:C (2.1) BS01 NAP 1.2.1.11 GO:0000166 ... A0A0H2UPS5 16895909 MOAD: Kd=6uM
    7502 2gz3:D (2.1) BS01 NAP 1.2.1.11 GO:0000166 ... A0A0H2UPS5 16895909 MOAD: Kd=6uM
    7503 2gz7:A (1.856) BS01 D3F 2.1.1.-
    2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0C6X7 16913704 MOAD: ic50=0.3uM
    PDBbind: -logKd/Ki=6.52, IC50=0.3uM
    BindingDB: IC50=300nM
    7504 2gz8:A (1.97) BS01 F3F 2.1.1.-
    2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0C6X7 16913704 MOAD: ic50=3uM
    PDBbind: -logKd/Ki=5.52, IC50=3uM
    BindingDB: IC50=3000nM
    7505 2gzk:A (-1.00) BS01 dna ? N/A P63159
    Q05066    		 16813837 PDBbind: Kd=140nM
    7506 2gzk:A (-1.00) BS02 dna ? N/A P63159
    Q05066    		 16813837 PDBbind: Kd=140nM
    7507 2gzl:A (2.5) BS02 2AA 4.6.1.12 GO:0005515 ... P62617 16392111 MOAD: Kd=15uM
    PDBbind: -logKd/Ki=4.82, Kd=15uM
    7508 2h02:A (2.3) BS01 2UN 3.1.3.48 GO:0004725 ... P23467 16759857 MOAD: ic50=0.32uM
    PDBbind: -logKd/Ki=6.49, IC50=0.32uM
    BindingDB: IC50=320nM
    7509 2h02:B (2.3) BS01 2UN 3.1.3.48 GO:0004725 ... P23467 16759857 MOAD: ic50=0.32uM
    BindingDB: IC50=320nM
    7510 2h03:A (1.65) BS01 3UN 3.1.3.48 GO:0004725 ... P23467 16759857 MOAD: ic50=0.09uM
    PDBbind: -logKd/Ki=7.05, IC50=0.09uM
    7511 2h04:A (2.3) BS01 4UN 3.1.3.48 GO:0004725 ... P23467 16759857 MOAD: ic50=0.07uM
    7512 2h12:A (1.85) BS01 OAA 2.3.3.16 GO:0004108 ... P20901 17087502 MOAD: Kd=21.1uM
    7513 2h12:B (1.85) BS01 OAA 2.3.3.16 GO:0004108 ... P20901 17087502 MOAD: Kd=21.1uM
    7514 2h12:C (1.85) BS01 OAA 2.3.3.16 GO:0004108 ... P20901 17087502 MOAD: Kd=21.1uM
    7515 2h12:D (1.85) BS01 OAA 2.3.3.16 GO:0004108 ... P20901 17087502 MOAD: Kd=21.1uM
    7516 2h12:E (1.85) BS01 OAA 2.3.3.16 GO:0004108 ... P20901 17087502 MOAD: Kd=21.1uM
    7517 2h12:F (1.85) BS01 OAA 2.3.3.16 GO:0004108 ... P20901 17087502 MOAD: Kd=21.1uM
    7518 2h15:A (1.9) BS02 B19 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 17125255 MOAD: Ki=2135nM
    PDBbind: -logKd/Ki=5.67, Ki=2135nM
    BindingDB: Ki=2135nM, Kd=25000nM
    7519 2h1h:A (2.4) BS01 AFH 2.4.99.23 GO:0005515 ... P24173 16963083 MOAD: ic50=30uM
    PDBbind: -logKd/Ki=4.52, IC50=30uM
    7520 2h1h:B (2.4) BS01 AFH 2.4.99.23 GO:0005515 ... P24173 16963083 MOAD: ic50=30uM
    7521 2h1k:A (2.42) BS01 dna ? GO:0000981 ... P70118 17315980 PDBbind: Kd=1.2nM
    7522 2h1k:A (2.42) BS02 dna ? GO:0000981 ... P70118 17315980 PDBbind: Kd=1.2nM
    7523 2h1k:B (2.42) BS01 dna ? GO:0000981 ... P70118 17315980 PDBbind: Kd=1.2nM
    7524 2h1k:B (2.42) BS02 dna ? GO:0000981 ... P70118 17315980 PDBbind: Kd=1.2nM
    7525 2h21:A (2.45) BS01 SAM 2.1.1.127
    2.1.1.259    		 GO:0009507 ... Q43088 16682405 MOAD: Kd=0.29uM
    PDBbind: -logKd/Ki=6.54, Kd=0.29uM
    7526 2h21:B (2.45) BS01 SAM 2.1.1.127
    2.1.1.259    		 GO:0009507 ... Q43088 16682405 MOAD: Kd=0.29uM
    7527 2h21:C (2.45) BS01 SAM 2.1.1.127
    2.1.1.259    		 GO:0009507 ... Q43088 16682405 MOAD: Kd=0.29uM
    7528 2h23:A (2.45) BS01 SAH 2.1.1.127
    2.1.1.259    		 GO:0009507 ... Q43088 16682405 MOAD: Kd=21.2uM
    PDBbind: -logKd/Ki=4.67, Kd=21.2uM
    7529 2h23:B (2.45) BS01 SAH 2.1.1.127
    2.1.1.259    		 GO:0009507 ... Q43088 16682405 MOAD: Kd=21.2uM
    7530 2h23:C (2.45) BS01 SAH 2.1.1.127
    2.1.1.259    		 GO:0009507 ... Q43088 16682405 MOAD: Kd=21.2uM
    7531 2h2e:A (2.6) BS01 SA8 2.1.1.127
    2.1.1.259    		 GO:0009507 ... Q43088 16682405 PDBbind: -logKd/Ki=3.00, Kd>1000uM
    7532 2h2j:A (2.45) BS01 SFG 2.1.1.127
    2.1.1.259    		 GO:0009507 ... Q43088 16682405 MOAD: Kd=4.2uM
    PDBbind: -logKd/Ki=5.38, Kd=4.2uM
    7533 2h2j:B (2.45) BS01 SFG 2.1.1.127
    2.1.1.259    		 GO:0009507 ... Q43088 16682405 MOAD: Kd=4.2uM
    7534 2h2j:C (2.45) BS01 SFG 2.1.1.127
    2.1.1.259    		 GO:0009507 ... Q43088 16682405 MOAD: Kd=4.2uM
    7535 2h3a:A (-1.00) BS01 dna ? GO:0003677 ... P62552 17007877 PDBbind: Kd=149uM
    7536 2h3a:A (-1.00) BS02 dna ? GO:0003677 ... P62552 17007877 PDBbind: Kd=149uM
    7537 2h3a:B (-1.00) BS01 dna ? GO:0003677 ... P62552 17007877 PDBbind: Kd=149uM
    7538 2h3a:B (-1.00) BS02 dna ? GO:0003677 ... P62552 17007877 PDBbind: Kd=149uM
    7539 2h3c:A (-1.00) BS01 dna ? GO:0003677 ... P62552 17007877 PDBbind: Kd=88.5uM
    7540 2h3c:A (-1.00) BS02 dna ? GO:0003677 ... P62552 17007877 PDBbind: Kd=88.5uM
    7541 2h3c:B (-1.00) BS01 dna ? GO:0003677 ... P62552 17007877 PDBbind: Kd=88.5uM
    7542 2h3e:A (2.3) BS01 6PR 2.1.3.2 GO:0004070 ... P0A786 17004708 MOAD: Kd=2uM
    7543 2h3e:C (2.3) BS01 6PR 2.1.3.2 GO:0004070 ... P0A786 17004708 MOAD: Kd=2uM
    7544 2h42:A (2.3) BS03 VIA 3.1.4.35 GO:0004114 ... O76074 16735511 MOAD: ic50=2.4nM
    PDBbind: -logKd/Ki=8.62, IC50=2.4nM
    BindingDB: IC50=2.2nM, Ki=1.9nM, EC50=8.7nM
    7545 2h42:B (2.3) BS02 VIA 3.1.4.35 GO:0004114 ... O76074 16735511 MOAD: ic50=2.4nM
    BindingDB: IC50=2.2nM, Ki=1.9nM, EC50=8.7nM
    7546 2h42:C (2.3) BS03 VIA 3.1.4.35 GO:0004114 ... O76074 16735511 MOAD: ic50=2.4nM
    BindingDB: IC50=2.2nM, Ki=1.9nM, EC50=8.7nM
    7547 2h44:A (1.8) BS03 7CA 3.1.4.35 GO:0004114 ... O76074 16735511 MOAD: ic50=1.7uM
    PDBbind: -logKd/Ki=5.77, IC50=1.7uM
    7548 2h4g:A (2.5) BS01 694 3.1.3.48 GO:0004725 ... P18031 16806920 MOAD: Ki=0.3uM
    PDBbind: -logKd/Ki=6.52, Ki=0.3uM
    7549 2h4k:A (2.3) BS01 509 3.1.3.48 GO:0004725 ... P18031 16806920 MOAD: Ki=3.2uM
    PDBbind: -logKd/Ki=5.49, Ki=3.2uM
    BindingDB: Ki=3200nM
    7550 2h4n:A (1.9) BS03 AZM 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 9398308 MOAD: Kd=0.002nM
    PDBbind: -logKd/Ki=8.70, Kd=2nM
    BindingDB: Ki=12nM, Kd=17nM, IC50=10nM
    7551 2h55:A (2.0) BS01 DZ8 3.6.4.10 GO:0005524 ... P07900 16884307 BindingDB: EC50=50.4nM
    7552 2h5a:X (1.72) BS02 X1P 5.4.2.2
    5.4.2.8    		 GO:0000287 ... P26276 16880541 PDBbind: -logKd/Ki=5.10, Kd=8uM
    7553 2h5e:A (2.8) BS01 GDP ? GO:0003924 ... P0A7I4 17540173 PDBbind: -logKd/Ki=8.25, Kd=5.6nM
    7554 2h6b:A (2.2) BS01 3C4 ? GO:0003677 ... Q8RPJ2 16803881 MOAD: Kd=4.1uM
    PDBbind: -logKd/Ki=5.39, Kd=4.1uM
    7555 2h6b:B (2.2) BS01 3C4 ? GO:0003677 ... Q8RPJ2 16803881 MOAD: Kd=4.1uM
    PDBbind: -logKd/Ki=5.39, Kd=4.1uM
    7556 2h6b:B (2.2) BS02 3C4 ? GO:0003677 ... Q8RPJ2 16803881 MOAD: Kd=4.1uM
    PDBbind: -logKd/Ki=5.39, Kd=4.1uM
    7557 2h7r:A (2.1) BS02 1MZ 1.14.15.1 GO:0004497 ... P00183 16943206 MOAD: Kd=55.9uM
    7558 2h8h:A (2.2) BS01 H8H 2.7.10.2 GO:0000122 ... P12931 17064066 MOAD: ic50=2.7nM
    PDBbind: -logKd/Ki=8.57, IC50=2.7nM
    BindingDB: IC50=2.7nM
    7559 2h8z:A (1.42) BS02 8CM 1.6.99.1 GO:0000166 ... Q88NF7 16822524 MOAD: Kd=2.5uM
    7560 2h8z:A (1.42) BS03 8CM 1.6.99.1 GO:0000166 ... Q88NF7 16822524 MOAD: Kd=2.5uM
    7561 2h90:A (1.42) BS02 COU 1.6.99.1 GO:0000166 ... Q88NF7 16822524 MOAD: Kd=5uM
    7562 2h90:A (1.42) BS03 COU 1.6.99.1 GO:0000166 ... Q88NF7 16822524 MOAD: Kd=5uM
    7563 2h96:A (3.0) BS02 893 2.7.11.24 GO:0004672 ... P45983 16854050 PDBbind: -logKd/Ki=6.64, IC50=0.23uM
    BindingDB: IC50=230nM
    7564 2h96:B (3.0) BS02 893 2.7.11.24 GO:0004672 ... P45983 16854050 BindingDB: IC50=230nM
    7565 2h9t:H (2.4) BS03 SVR 3.4.21.5 GO:0004252 ... P00734 19332154 PDBbind: -logKd/Ki=4.70, IC50=20uM
    7566 2h9v:A (3.1) BS01 Y27 2.7.11.1 GO:0004672 ... Q28021 16891330 BindingDB: IC50=500nM
    7567 2ha0:A (2.2) BS02 NWA 3.1.1.7 GO:0001919 ... P21836 16837465 PDBbind: -logKd/Ki=4.43, Kd=37uM
    7568 2ha0:A (2.2) BS03 CHH 3.1.1.7 GO:0001919 ... P21836 16837465 MOAD: Kd=0.037mM
    BindingDB: Ki=23000nM
    7569 2ha0:B (2.2) BS02 CHH 3.1.1.7 GO:0001919 ... P21836 16837465 MOAD: Kd=0.037mM
    BindingDB: Ki=23000nM
    7570 2ha2:A (2.05) BS01 SCK 3.1.1.7 GO:0001919 ... P21836 16837465 MOAD: Kd=0.022mM
    PDBbind: -logKd/Ki=4.66, Kd=22uM
    BindingDB: Ki=21000nM
    7571 2ha2:B (2.05) BS01 SCK 3.1.1.7 GO:0001919 ... P21836 16837465 MOAD: Kd=0.022mM
    BindingDB: Ki=21000nM
    7572 2ha3:A (2.25) BS01 CHT 3.1.1.7 GO:0001919 ... P21836 16837465 MOAD: Kd=0.93mM
    PDBbind: -logKd/Ki=3.03, Kd=930uM
    7573 2ha3:A (2.25) BS02 CHT 3.1.1.7 GO:0001919 ... P21836 16837465 MOAD: Kd=0.93mM
    PDBbind: -logKd/Ki=3.03, Kd=930uM
    7574 2ha3:B (2.25) BS01 CHT 3.1.1.7 GO:0001919 ... P21836 16837465 MOAD: Kd=0.93mM
    7575 2ha3:B (2.25) BS02 CHT 3.1.1.7 GO:0001919 ... P21836 16837465 MOAD: Kd=0.93mM
    7576 2ha4:A (2.56) BS01 ACH 3.1.1.7 GO:0001919 ... P21836 16837465 PDBbind: -logKd/Ki=2.70, Kd=2.0mM
    7577 2ha4:A (2.56) BS02 ACH 3.1.1.7 GO:0001919 ... P21836 16837465 PDBbind: -logKd/Ki=2.70, Kd=2.0mM
    7578 2ha5:A (2.15) BS01 AT3 3.1.1.7 GO:0001919 ... P21836 16837465 PDBbind: -logKd/Ki=4.34, Kd=46uM
    7579 2ha5:A (2.15) BS03 AT3 3.1.1.7 GO:0001919 ... P21836 16837465 PDBbind: -logKd/Ki=4.34, Kd=46uM
    7580 2ha6:A (2.25) BS01 SCK 3.1.1.7 GO:0001919 ... P21836 16837465 PDBbind: -logKd/Ki=4.32, Kd=48uM
    BindingDB: Ki=21000nM
    7581 2ha6:A (2.25) BS02 SCK 3.1.1.7 GO:0001919 ... P21836 16837465 PDBbind: -logKd/Ki=4.32, Kd=48uM
    BindingDB: Ki=21000nM
    7582 2ha6:B (2.25) BS01 SCK 3.1.1.7 GO:0001919 ... P21836 16837465 BindingDB: Ki=21000nM
    7583 2ha6:B (2.25) BS02 SCK 3.1.1.7 GO:0001919 ... P21836 16837465 BindingDB: Ki=21000nM
    7584 2ha7:A (2.66) BS03 BCH 3.1.1.7 GO:0001919 ... P21836 16837465 PDBbind: -logKd/Ki=3.36, Kd=440uM
    7585 2hah:A (1.7) BS01 3TL 3.1.13.2
    3.1.26.13    		 GO:0004190 ... Q66972 17212810 MOAD: Ki=10nM
    PDBbind: -logKd/Ki=8.00, Ki=10nM
    7586 2hai:A (1.58) BS01 PFI 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... Q99AU2 16824756 MOAD: ic50=0.53uM
    PDBbind: -logKd/Ki=6.28, IC50=0.53uM
    7587 2haw:A (1.75) BS05 2PN 3.6.1.1 GO:0004427 ... P37487 17095506 MOAD: Kd=12uM
    PDBbind: -logKd/Ki=4.92, Kd=12uM
    7588 2haw:B (1.75) BS05 2PN 3.6.1.1 GO:0004427 ... P37487 17095506 MOAD: Kd=12uM
    PDBbind: -logKd/Ki=4.92, Kd=12uM
    7589 2hb1:A (2.0) BS01 512 3.1.3.48 GO:0004725 ... P18031 16806920 MOAD: Ki=160uM
    PDBbind: -logKd/Ki=3.80, Ki=160uM
    7590 2hb3:A (1.35) BS01 GRL 3.4.23.4 GO:0004190 ... Q7SSI0 16913714 PDBbind: -logKd/Ki=11.35, Ki=4.5pM
    7591 2hb3:B (1.35) BS01 GRL 3.4.23.4 GO:0004190 ... Q7SSI0 16913714 MOAD: Ki=0.0045nM
    PDBbind: -logKd/Ki=11.35, Ki=4.5pM
    7592 2hb9:A (1.75) BS03 L13 3.5.2.6 GO:0008270 ... P52700 17999929 MOAD: ic50=15uM
    PDBbind: -logKd/Ki=4.82, IC50=15uM
    7593 2hb9:A (1.75) BS04 L13 3.5.2.6 GO:0008270 ... P52700 17999929 MOAD: ic50=15uM
    PDBbind: -logKd/Ki=4.82, IC50=15uM
    7594 2hbt:A (1.6) BS02 UN9 1.14.11.29 GO:0005506 ... Q9GZT9 N/A BindingDB: IC50=300nM, EC50=79000nM, Kd=80nM
    7595 2hbu:A (1.85) BS02 UN9 1.14.11.29 GO:0005506 ... Q9GZT9 N/A BindingDB: IC50=300nM, EC50=79000nM, Kd=80nM
    7596 2hc4:A (2.2) BS02 VDX ? GO:0003677 ... Q9PTN2 17218092 BindingDB: Kd=1200nM, EC50=5.5nM
    7597 2hd1:A (2.23) BS02 IBM 3.1.4.35 GO:0004114 ... O76083 15210993 MOAD: ic50~500uM
    PDBbind: -logKd/Ki=3.30, IC50=500uM
    BindingDB: IC50=>200000nM
    7598 2hd1:B (2.23) BS02 IBM 3.1.4.35 GO:0004114 ... O76083 15210993 MOAD: ic50~500uM
    BindingDB: IC50=>200000nM
    7599 2hd6:A (1.8) BS02 BOS 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 16942027 MOAD: Ki=16nM
    PDBbind: -logKd/Ki=7.80, Ki=16nM
    BindingDB: Ki=16nM
    7600 2hdd:A (1.9) BS01 dna ? GO:0000981 ... P02836 9309220 PDBbind: Kd=8.8pM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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