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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    7201 2fr4:L (1.95) BS01 dna N/A N/A N/A 18028946 PDBbind: Kd=4uM
    7202 2fs4:B (2.2) BS01 PZ1 3.4.23.15 GO:0004190 ... P00797 16480874 MOAD: ic50=37nM
    BindingDB: IC50=37nM
    7203 2fs8:A (2.5) BS01 C3A 3.4.21.59 GO:0004252 ... P20231 16681368 PDBbind: -logKd/Ki=7.60, Ki=25nM
    7204 2fs8:D (2.5) BS01 C3A 3.4.21.59 GO:0004252 ... P20231 16681368 PDBbind: -logKd/Ki=7.60, Ki=25nM
    7205 2fs9:A (2.3) BS01 C4A 3.4.21.59 GO:0004252 ... P20231 16681368 PDBbind: -logKd/Ki=8.52, Ki=3nM
    BindingDB: Ki=3nM
    7206 2fs9:B (2.3) BS01 C4A 3.4.21.59 GO:0004252 ... P20231 16681368 BindingDB: Ki=3nM
    7207 2fs9:C (2.3) BS01 C4A 3.4.21.59 GO:0004252 ... P20231 16681368 BindingDB: Ki=3nM
    7208 2fs9:D (2.3) BS01 C4A 3.4.21.59 GO:0004252 ... P20231 16681368 PDBbind: -logKd/Ki=8.52, Ki=3nM
    BindingDB: Ki=3nM
    7209 2fsv:A (2.3) BS01 NAD 7.1.1.1 GO:0000166 ... Q2RSB2 16533815 MOAD: Kd~20uM
    7210 2fsz:A (2.2) BS01 OHT ? N/A Q92731 16782818 BindingDB: IC50=20nM, Ki=0.16nM, EC50=32nM
    7211 2fsz:A (2.2) BS02 OHT ? N/A Q92731 16782818 BindingDB: IC50=20nM, Ki=0.16nM, EC50=32nM
    7212 2fsz:B (2.2) BS01 OHT ? N/A Q92731 16782818 BindingDB: IC50=20nM, Ki=0.16nM, EC50=32nM
    7213 2fsz:B (2.2) BS02 OHT ? N/A Q92731 16782818 BindingDB: IC50=20nM, Ki=0.16nM, EC50=32nM
    7214 2ftd:A (2.55) BS01 ILI 3.4.22.38 GO:0006508 ... P61277 16509577 PDBbind: -logKd/Ki=10.39, Ki=0.041nM
    7215 2fu8:A (1.8) BS03 MCO 3.5.2.6 GO:0008270 ... P52700 17999929 MOAD: Ki=20uM
    PDBbind: -logKd/Ki=4.70, Ki=20uM
    7216 2fu8:B (1.8) BS03 MCO 3.5.2.6 GO:0008270 ... P52700 17999929 MOAD: Ki=20uM
    7217 2fum:A (2.89) BS01 MIX 2.7.11.1 GO:0004672 ... P9WI81 16674948 PDBbind: -logKd/Ki=6.10, IC50=0.8uM
    7218 2fv5:A (2.1) BS02 541 3.4.24.86 GO:0004222 ... P78536 16762314 MOAD: Ki~0.033nM
    PDBbind: -logKd/Ki=11.70, Kd<2pM
    BindingDB: IC50=1nM
    7219 2fv5:B (2.1) BS02 541 3.4.24.86 GO:0004222 ... P78536 16762314 MOAD: Ki~0.033nM
    BindingDB: IC50=1nM
    7220 2fv9:B (2.02) BS02 002 3.4.24.86 GO:0004222 ... P78536 16459338 MOAD: ic50=60nM
    7221 2fvc:A (2.0) BS01 888 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... Q99AU2 16451063 MOAD: ic50=32nM
    PDBbind: -logKd/Ki=7.49, IC50=32nM
    7222 2fvc:B (2.0) BS01 888 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... Q99AU2 16451063 MOAD: ic50=32nM
    7223 2fvd:A (1.85) BS01 LIA 2.7.11.22 GO:0000082 ... P24941 17064073 MOAD: Ki=0.003uM
    PDBbind: -logKd/Ki=8.52, Ki=3nM
    BindingDB: Ki=3nM, Kd=0.530000nM
    7224 2fw3:A (2.5) BS01 BUI 2.3.1.21 GO:0001676 ... P18886 16615901 PDBbind: -logKd/Ki=6.42, IC50=0.38uM
    BindingDB: IC50=380nM
    7225 2fw4:A (2.0) BS02 HIS 4.2.1.1
    4.2.1.69    		 GO:0004064 ... P00915 16870440 MOAD: Kd=30nM
    7226 2fw4:B (2.0) BS02 HIS 4.2.1.1
    4.2.1.69    		 GO:0004064 ... P00915 16870440 MOAD: Kd=30nM
    7227 2fwp:A (1.85) BS01 ICR 5.4.99.18 GO:0003824 ... Q2QJL3 16819818 MOAD: Kd=0.78uM
    7228 2fwy:A (2.1) BS01 H64 3.6.4.10 GO:0005524 ... P07900 16884307 MOAD: ic50=200nM
    PDBbind: -logKd/Ki=6.70, IC50=200nM
    BindingDB: EC50=38.8nM
    7229 2fwz:A (2.1) BS01 H71 3.6.4.10 GO:0005524 ... P07900 16884307 MOAD: ic50=50nM
    PDBbind: -logKd/Ki=7.30, IC50=50nM
    BindingDB: IC50=51nM, EC50=10.00nM
    7230 2fx6:A (1.57) BS02 270 3.4.21.4 GO:0004175 ... P00760 16681368 MOAD: Ki=200uM
    PDBbind: -logKd/Ki=3.70, Ki=200uM
    7231 2fxd:A (1.6) BS01 DR7 3.1.26.13 GO:0004190 ... Q90HG9 17537865 MOAD: ic50=12nM
    7232 2fxr:A (2.5) BS01 C3A 3.4.21.59 GO:0004252 ... P20231 16681368 PDBbind: -logKd/Ki=7.60, Ki=25nM
    7233 2fxr:D (2.5) BS01 C3A 3.4.21.59 GO:0004252 ... P20231 16681368 PDBbind: -logKd/Ki=7.60, Ki=25nM
    7234 2fxs:A (2.0) BS01 RDA ? GO:0005524 ... P02829 19361515 MOAD: Kd=0.87uM
    PDBbind: -logKd/Ki=6.06, Kd=0.87uM
    7235 2fxu:A (1.35) BS04 BID 3.6.4.- GO:0000287 ... P68135 16551075 MOAD: Kd=7nM
    PDBbind: -logKd/Ki=8.15, Kd=7nM
    7236 2fxv:A (2.05) BS01 5GP 2.4.2.22 GO:0000310 ... P42085 16716072 MOAD: Kd=4.5uM
    PDBbind: -logKd/Ki=5.35, Kd=4.5uM
    7237 2fxv:B (2.05) BS01 5GP 2.4.2.22 GO:0000310 ... P42085 16716072 MOAD: Kd=4.5uM
    PDBbind: -logKd/Ki=5.35, Kd=4.5uM
    7238 2fy4:A (2.3) BS01 COA 2.3.1.6 GO:0016746 ... P28329 17144655 BindingDB: Ki=75000nM
    7239 2fyt:A (2.0) BS01 SAH 2.1.1.319 GO:0016274 ... O60678 N/A BindingDB: IC50=2000nM
    7240 2fyv:A (1.9) BS02 W72 3.2.1.114 GO:0000139 ... Q24451 17010621 MOAD: ic50=0.3mM
    PDBbind: -logKd/Ki=3.52, IC50=0.3mM
    7241 2fz8:A (1.48) BS02 ZST 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54    		 GO:0001523 ... P15121 16952371 BindingDB: IC50=3.1nM, Ki=19nM
    7242 2fz9:A (1.6) BS02 ZST 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54    		 GO:0001523 ... P15121 16952371 BindingDB: IC50=3.1nM, Ki=19nM
    7243 2fzb:A (1.5) BS02 TOL 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54    		 GO:0001523 ... P15121 16952371 BindingDB: IC50=10.0nM
    7244 2fzb:A (1.5) BS03 TOL 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54    		 GO:0001523 ... P15121 16952371 BindingDB: IC50=10.0nM
    7245 2fzb:A (1.5) BS04 TOL 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54    		 GO:0001523 ... P15121 16952371 BindingDB: IC50=10.0nM
    7246 2fzc:A (2.1) BS01 EOP 2.1.3.2 GO:0004070 ... P0A786 16906764 MOAD: Ki=1900uM
    PDBbind: -logKd/Ki=2.70, Ki=1990uM
    7247 2fzc:C (2.1) BS01 EOP 2.1.3.2 GO:0004070 ... P0A786 16906764 MOAD: Ki=1900uM
    7248 2fzd:A (1.08) BS02 TOL 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54    		 GO:0001523 ... P15121 16952371 BindingDB: IC50=10.0nM
    7249 2fzg:A (2.25) BS01 EOB 2.1.3.2 GO:0004070 ... P0A786 16906764 MOAD: Ki=420uM
    PDBbind: -logKd/Ki=3.38, Ki=420uM
    7250 2fzg:C (2.25) BS01 EOB 2.1.3.2 GO:0004070 ... P0A786 16906764 MOAD: Ki=420uM
    7251 2fzh:A (2.1) BS02 DH1 1.5.1.3 GO:0004146 ... P16184 17019704 MOAD: ic50=0.049nM
    7252 2fzi:A (1.6) BS02 DH3 1.5.1.3 GO:0004146 ... P16184 17019704 MOAD: ic50=1nM
    BindingDB: IC50=1nM
    7253 2fzk:A (2.5) BS01 EOZ 2.1.3.2 GO:0004070 ... P0A786 16906764 MOAD: Ki=310uM
    PDBbind: -logKd/Ki=3.60, Ki=250uM
    7254 2fzk:C (2.5) BS01 EOZ 2.1.3.2 GO:0004070 ... P0A786 16906764 MOAD: Ki=310uM
    7255 2fzw:A (1.84) BS04 NAD 1.1.1.-
    1.1.1.1
    1.1.1.284    		 GO:0001523 ... P11766 16605250 MOAD: Kd=0.076uM
    7256 2fzw:B (1.84) BS04 NAD 1.1.1.-
    1.1.1.1
    1.1.1.284    		 GO:0001523 ... P11766 16605250 MOAD: Kd=0.076uM
    7257 2fzz:A (2.2) BS01 5QC 3.4.21.6 GO:0004252 ... P00742 16730984 MOAD: Ki=30pM
    PDBbind: -logKd/Ki=10.52, Ki=0.03nM
    BindingDB: Ki=0.03nM
    7258 2g00:A (2.1) BS01 4QC 3.4.21.6 GO:0004252 ... P00742 16963264 MOAD: Ki=0.18nM
    PDBbind: -logKd/Ki=9.74, Ki=0.18nM
    BindingDB: Ki=0.18nM
    7259 2g01:A (3.5) BS02 73Q 2.7.11.24 GO:0004672 ... P45983 16527482 PDBbind: -logKd/Ki=5.91, IC50=1.22uM
    BindingDB: IC50=1220nM
    7260 2g01:B (3.5) BS02 73Q 2.7.11.24 GO:0004672 ... P45983 16527482 BindingDB: IC50=1220nM
    7261 2g0g:A (2.54) BS01 SP0 ? GO:0003677 ... P37231 16640330 PDBbind: -logKd/Ki=6.29, IC50=512nM
    BindingDB: IC50=512nM, EC50=1750nM
    7262 2g0h:A (2.3) BS01 SP3 ? GO:0003677 ... P37231 16640330 MOAD: ic50=22.7nM
    PDBbind: -logKd/Ki=7.64, IC50=22.7nM
    BindingDB: IC50=23nM, EC50=0.78nM
    7263 2g0h:B (2.3) BS01 SP3 ? GO:0003677 ... P37231 16640330 MOAD: ic50=22.7nM
    BindingDB: IC50=23nM, EC50=0.78nM
    7264 2g19:A (1.7) BS02 4HG 1.14.11.29 GO:0005506 ... Q9GZT9 16782814 PDBbind: -logKd/Ki=5.85, IC50=1.4uM
    BindingDB: IC50=1400nM
    7265 2g1m:A (2.2) BS02 4HG 1.14.11.29 GO:0005506 ... Q9GZT9 16782814 BindingDB: IC50=1400nM
    7266 2g1o:A (2.7) BS01 2IG 3.4.23.15 GO:0004190 ... P00797 16480874 BindingDB: IC50=173nM
    7267 2g1o:B (2.7) BS01 2IG 3.4.23.15 GO:0004190 ... P00797 16480874 BindingDB: IC50=173nM
    7268 2g1q:A (2.51) BS02 N9H ? GO:0003777 ... P52732 16603356 PDBbind: -logKd/Ki=7.36, IC50=44nM
    7269 2g1r:A (2.42) BS01 3IG 3.4.23.15 GO:0004190 ... P00797 16480874 PDBbind: -logKd/Ki=7.70, IC50=20nM
    BindingDB: IC50=20nM
    7270 2g1r:B (2.42) BS01 3IG 3.4.23.15 GO:0004190 ... P00797 16480874 BindingDB: IC50=20nM
    7271 2g1s:A (2.5) BS01 4IG 3.4.23.15 GO:0004190 ... P00797 16480874 BindingDB: IC50=95nM
    7272 2g1s:B (2.5) BS01 4IG 3.4.23.15 GO:0004190 ... P00797 16480874 BindingDB: IC50=95nM
    7273 2g1y:A (2.5) BS01 5IG 3.4.23.15 GO:0004190 ... P00797 16480874 PDBbind: -logKd/Ki=7.05, IC50=0.09uM
    BindingDB: IC50=90nM
    7274 2g1y:B (2.5) BS01 5IG 3.4.23.15 GO:0004190 ... P00797 16480874 BindingDB: IC50=90nM
    7275 2g24:A (1.9) BS01 7IG 3.4.23.15 GO:0004190 ... P00797 16480874 PDBbind: -logKd/Ki=5.40, IC50=4uM
    BindingDB: IC50=4000nM
    7276 2g2h:A (2.0) BS01 P16 2.7.10.2 GO:0004672 ... P00519 16640460 MOAD: Ki~1uM
    BindingDB: IC50=2.8nM
    7277 2g2h:B (2.0) BS01 P16 2.7.10.2 GO:0004672 ... P00519 16640460 MOAD: Ki~1uM
    BindingDB: IC50=2.8nM
    7278 2g2r:H (2.75) BS01 TNS ? GO:0002250 ... P84751 17089439 PDBbind: -logKd/Ki=7.89, Kd=13nM
    7279 2g2r:L (2.75) BS01 TNS N/A N/A N/A 17089439 PDBbind: -logKd/Ki=7.89, Kd=13nM
    7280 2g4b:A (2.5) BS01 rna ? GO:0003676 ... P26368 16818232 PDBbind: Kd=1.8uM
    7281 2g5p:A (2.4) BS01 ADF 3.4.14.5 GO:0001618 ... P27487 16759095 PDBbind: -logKd/Ki=8.42, Ki=3.8nM
    BindingDB: Ki=3.8nM
    7282 2g5t:A (2.3) BS01 ACF 3.4.14.5 GO:0001618 ... P27487 16759095 PDBbind: -logKd/Ki=9.09, Ki=0.82nM
    BindingDB: Ki=0.820000nM
    7283 2g5u:A (1.8) BS01 PCQ ? GO:0005179 ... P02766 15610856 MOAD: Kd=3.2nM
    PDBbind: -logKd/Ki=8.49, Kd=3.2nM
    7284 2g5u:B (1.8) BS01 PCQ ? GO:0005179 ... P02766 15610856 MOAD: Kd=3.2nM
    PDBbind: -logKd/Ki=8.49, Kd=3.2nM
    7285 2g63:B (2.0) BS01 AAF 3.4.14.5 GO:0001618 ... P27487 16759095 PDBbind: -logKd/Ki=8.17, Ki=6.7nM
    BindingDB: Ki=6.7nM
    7286 2g6p:A (1.9) BS03 HM2 3.4.11.18 GO:0006508 ... P53582 16724298 MOAD: ic50=0.6uM
    PDBbind: -logKd/Ki=6.22, IC50=0.6uM
    BindingDB: EC50=190nM, IC50=860nM
    7287 2g70:A (2.4) BS02 HNT 2.1.1.28 GO:0004603 ... P11086 17845018 MOAD: Ki=17nM
    PDBbind: -logKd/Ki=7.77, Ki=17nM
    BindingDB: Ki=17nM
    7288 2g70:A (2.4) BS03 HNT 2.1.1.28 GO:0004603 ... P11086 17845018 MOAD: Ki=17nM
    PDBbind: -logKd/Ki=7.77, Ki=17nM
    BindingDB: Ki=17nM
    7289 2g70:B (2.4) BS02 HNT 2.1.1.28 GO:0004603 ... P11086 17845018 MOAD: Ki=17nM
    BindingDB: Ki=17nM
    7290 2g71:A (2.2) BS02 FTS 2.1.1.28 GO:0004603 ... P11086 17845018 MOAD: Ki=35nM
    PDBbind: -logKd/Ki=7.46, Ki=35nM
    BindingDB: Ki=220nM
    7291 2g71:B (2.2) BS02 FTS 2.1.1.28 GO:0004603 ... P11086 17845018 MOAD: Ki=35nM
    BindingDB: Ki=220nM
    7292 2g72:A (2.0) BS02 F21 2.1.1.28 GO:0004603 ... P11086 17845018 MOAD: Ki=315nM
    PDBbind: -logKd/Ki=6.50, Ki=315nM
    BindingDB: Ki=1200nM
    7293 2g72:B (2.0) BS02 F21 2.1.1.28 GO:0004603 ... P11086 17845018 MOAD: Ki=315nM
    BindingDB: Ki=1200nM
    7294 2g78:A (1.7) BS01 REA ? GO:0001972 ... P29373 17447762 PDBbind: -logKd/Ki=6.92, Kd=120nM
    7295 2g79:A (1.69) BS01 RET ? GO:0001972 ... P29373 17447762 MOAD: Kd=120nM
    PDBbind: -logKd/Ki=6.92, Kd=120nM
    7296 2g83:A (2.8) BS04 GDP ? GO:0003924 ... P63096 16981699 PDBbind: -logKd/Ki=5.92, Kd=1.2uM
    7297 2g86:A (2.4) BS01 UMP 2.1.1.45 GO:0004799 ... P00469 16768437 MOAD: Kd=0.44uM
    7298 2g8n:A (2.15) BS01 F83 2.1.1.28 GO:0004603 ... P11086 16942016 MOAD: Ki=0.063uM
    PDBbind: -logKd/Ki=7.20, Ki=63nM
    BindingDB: Ki=63nM
    7299 2g8n:B (2.15) BS01 F83 2.1.1.28 GO:0004603 ... P11086 16942016 MOAD: Ki=0.063uM
    BindingDB: Ki=63nM
    7300 2g8r:A (1.7) BS01 N3E 4.6.1.18 GO:0003676 ... P61823 16730994 MOAD: Ki=103uM
    7301 2g8r:A (1.7) BS02 N3E 4.6.1.18 GO:0003676 ... P61823 16730994 MOAD: Ki=103uM
    7302 2g94:A (1.86) BS01 ZPQ 3.4.23.46 GO:0004190 ... P56817 16620080 MOAD: Ki=0.3nM
    PDBbind: -logKd/Ki=9.52, Ki=0.3nM
    BindingDB: Ki=0.300000nM
    7303 2g94:B (1.86) BS01 ZPQ 3.4.23.46 GO:0004190 ... P56817 16620080 MOAD: Ki=0.3nM
    BindingDB: Ki=0.300000nM
    7304 2g94:C (1.86) BS01 ZPQ 3.4.23.46 GO:0004190 ... P56817 16620080 MOAD: Ki=0.3nM
    BindingDB: Ki=0.300000nM
    7305 2g94:D (1.86) BS01 ZPQ 3.4.23.46 GO:0004190 ... P56817 16620080 MOAD: Ki=0.3nM
    BindingDB: Ki=0.300000nM
    7306 2g96:A (2.9) BS01 NMN 2.4.2.12 GO:0000166 ... Q80Z29 16901503 PDBbind: -logKd/Ki=4.28, Kd=52.8uM
    7307 2g96:A (2.9) BS02 NMN 2.4.2.12 GO:0000166 ... Q80Z29 16901503 PDBbind: -logKd/Ki=4.28, Kd=52.8uM
    7308 2g96:B (2.9) BS01 NMN 2.4.2.12 GO:0000166 ... Q80Z29 16901503 PDBbind: -logKd/Ki=4.28, Kd=52.8uM
    7309 2g96:B (2.9) BS02 NMN 2.4.2.12 GO:0000166 ... Q80Z29 16901503 PDBbind: -logKd/Ki=4.28, Kd=52.8uM
    7310 2g97:A (2.9) BS01 DGB 2.4.2.12 GO:0000166 ... Q80Z29 16901503 PDBbind: -logKd/Ki=6.82, Kd=152nM
    7311 2g97:B (2.9) BS01 DGB 2.4.2.12 GO:0000166 ... Q80Z29 16901503 PDBbind: -logKd/Ki=6.82, Kd=152nM
    7312 2g9q:A (2.5) BS03 1AB 2.4.1.1 GO:0000166 ... P00489 16970395 MOAD: ic50=0.84uM
    PDBbind: -logKd/Ki=6.40, Ki=0.4uM
    BindingDB: Ki=400nM
    7313 2g9r:A (2.07) BS01 G27 2.4.1.1 GO:0000166 ... P00489 16970395 MOAD: ic50=0.84uM
    PDBbind: -logKd/Ki=6.08, IC50=0.84uM
    BindingDB: IC50=840nM
    7314 2g9u:A (2.15) BS02 G27 2.4.1.1 GO:0000166 ... P00489 16970395 MOAD: ic50=0.84uM
    PDBbind: -logKd/Ki=6.08, IC50=0.84uM
    BindingDB: IC50=840nM
    7315 2g9v:A (2.15) BS02 IFM 2.4.1.1 GO:0000166 ... P00489 16970395 MOAD: Ki=5.2uM
    PDBbind: -logKd/Ki=5.92, IC50=1.21uM
    BindingDB: IC50=1210nM, Ki=5200nM
    7316 2g9x:A (2.5) BS01 NU5 2.7.11.22 GO:0000082 ... P24941 16669651 MOAD: ic50=45nM
    PDBbind: -logKd/Ki=7.35, IC50=45nM
    7317 2g9x:C (2.5) BS01 NU5 2.7.11.22 GO:0000082 ... P24941 16669651 MOAD: ic50=45nM
    7318 2ga2:A (1.95) BS03 A19 3.4.11.18 GO:0006508 ... P50579 16632353 MOAD: ic50=3uM
    PDBbind: -logKd/Ki=5.52, IC50=3uM
    BindingDB: IC50=9100nM
    7319 2gbf:A (3.1) BS01 AIA 3.4.14.5 GO:0001618 ... P14740 16768443 PDBbind: -logKd/Ki=7.92, Ki=12nM
    7320 2gbg:A (3.0) BS01 1AD 3.4.14.5 GO:0001618 ... P14740 16768443 PDBbind: -logKd/Ki=7.25, Ki=56nM
    7321 2gbi:A (3.3) BS01 XIH 3.4.14.5 GO:0001618 ... P14740 16768443 PDBbind: -logKd/Ki=8.52, Ki=3nM
    BindingDB: Ki=3nM
    7322 2gbp:A (1.9) BS01 BGC ? GO:0005509 ... P0AEE5 3057628 MOAD: Kd=0.1uM
    7323 2gc0:A (2.0) BS02 PAN 5.3.1.9 GO:0004347 ... P83194 16580686 MOAD: Ki=3uM
    7324 2gc0:B (2.0) BS02 PAN 5.3.1.9 GO:0004347 ... P83194 16580686 MOAD: Ki=3uM
    7325 2gc8:A (2.2) BS01 885 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... Q99AU2 16722622 MOAD: ic50=3.1uM
    PDBbind: -logKd/Ki=5.51, IC50=3.1uM
    7326 2gc8:B (2.2) BS01 885 3.4.21.98
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... Q99AU2 16722622 MOAD: ic50=3.1uM
    7327 2gcd:A (2.55) BS01 STU 2.7.11.1 GO:0004672 ... Q9JLS3 16761096 PDBbind: -logKd/Ki=5.52, IC50=3uM
    7328 2gce:A (1.85) BS01 SFC 5.1.99.4 GO:0003824 ... O06543 17320106 MOAD: Kd=24.5uM
    7329 2gce:A (1.85) BS02 RFC 5.1.99.4 GO:0003824 ... O06543 17320106 MOAD: Kd=24.5uM
    7330 2gce:A (1.85) BS03 RFC 5.1.99.4 GO:0003824 ... O06543 17320106 MOAD: Kd=24.5uM
    7331 2gce:B (1.85) BS01 RFC 5.1.99.4 GO:0003824 ... O06543 17320106 MOAD: Kd=24.5uM
    7332 2gce:B (1.85) BS02 SFC 5.1.99.4 GO:0003824 ... O06543 17320106 MOAD: Kd=24.5uM
    7333 2gce:B (1.85) BS03 RFC 5.1.99.4 GO:0003824 ... O06543 17320106 MOAD: Kd=24.5uM
    7334 2gce:C (1.85) BS01 SFC 5.1.99.4 GO:0003824 ... O06543 17320106 MOAD: Kd=24.5uM
    7335 2gce:C (1.85) BS02 RFC 5.1.99.4 GO:0003824 ... O06543 17320106 MOAD: Kd=24.5uM
    7336 2gce:C (1.85) BS03 SFC 5.1.99.4 GO:0003824 ... O06543 17320106 MOAD: Kd=24.5uM
    7337 2gce:C (1.85) BS04 RFC 5.1.99.4 GO:0003824 ... O06543 17320106 MOAD: Kd=24.5uM
    7338 2gce:D (1.85) BS01 RFC 5.1.99.4 GO:0003824 ... O06543 17320106 MOAD: Kd=24.5uM
    7339 2gce:D (1.85) BS02 SFC 5.1.99.4 GO:0003824 ... O06543 17320106 MOAD: Kd=24.5uM
    7340 2gce:D (1.85) BS03 RFC 5.1.99.4 GO:0003824 ... O06543 17320106 MOAD: Kd=24.5uM
    7341 2gcq:A (2.0) BS04 HDA 6.3.4.4 GO:0000166 ... P0A7D4 16981730 MOAD: Ki=17uM
    7342 2gd8:A (1.46) BS02 PO1 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 17181151 MOAD: ic50=379nM
    PDBbind: -logKd/Ki=7.41, IC50=39nM
    BindingDB: IC50=379nM, Ki=270nM, Kd=3750nM
    7343 2gd8:A (1.46) BS03 PO1 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 17181151 MOAD: ic50=379nM
    PDBbind: -logKd/Ki=7.41, IC50=39nM
    BindingDB: IC50=379nM, Ki=270nM, Kd=3750nM
    7344 2gde:H (2.0) BS03 SN3 3.4.21.5 GO:0004252 ... P00734 16895415 MOAD: ic50=5.7nM
    PDBbind: -logKd/Ki=8.24, IC50=5.7nM
    7345 2gdo:A (3.0) BS01 12C 2.7.11.1 GO:0000077 ... O14757 16603354 PDBbind: -logKd/Ki=9.49, IC50=0.32nM
    BindingDB: IC50=0.320000nM
    7346 2ge5:A (2.4) BS01 dna 3.1.21.4 GO:0003677 ... P04390 16981705 PDBbind: Kd=381nM
    7347 2ge5:A (2.4) BS02 dna 3.1.21.4 GO:0003677 ... P04390 16981705 PDBbind: Kd=381nM
    7348 2ge5:B (2.4) BS01 dna 3.1.21.4 GO:0003677 ... P04390 16981705 PDBbind: Kd=381nM
    7349 2ge5:B (2.4) BS02 dna 3.1.21.4 GO:0003677 ... P04390 16981705 PDBbind: Kd=381nM
    7350 2geh:A (2.0) BS02 NHY 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 16759856 MOAD: Ki=28uM
    BindingDB: Ki=28000nM
    7351 2gej:A (2.6) BS01 GDD 2.4.1.345 GO:0004377 ... A0QWG6 17510062 PDBbind: -logKd/Ki=6.64, Kd=0.23uM
    7352 2gek:A (2.4) BS01 GDP 2.4.1.345 GO:0004377 ... A0QWG6 17510062 PDBbind: -logKd/Ki=7.52, Kd=0.03uM
    7353 2gfd:A (2.3) BS01 RDA ? GO:0005524 ... P41148 19361515 MOAD: Kd=0.52uM
    PDBbind: -logKd/Ki=6.28, Kd=0.52uM
    7354 2gfd:B (2.3) BS01 RDA ? GO:0005524 ... P41148 19361515 MOAD: Kd=0.52uM
    7355 2gfj:A (1.8) BS03 VI 3.5.2.6 GO:0008270 ... P52700 17999929 MOAD: ic50=150uM
    PDBbind: -logKd/Ki=3.82, IC50=150uM
    7356 2gfj:B (1.8) BS03 VI 3.5.2.6 GO:0008270 ... P52700 17999929 MOAD: ic50=150uM
    7357 2gfk:A (1.9) BS03 VII 3.5.2.6 GO:0008270 ... P52700 17999929 MOAD: ic50=30uM
    PDBbind: -logKd/Ki=4.52, IC50=30uM
    7358 2gfk:B (1.9) BS03 VII 3.5.2.6 GO:0008270 ... P52700 17999929 MOAD: ic50=30uM
    7359 2gfs:A (1.752) BS01 PQB 2.7.11.24 GO:0000077 ... Q16539 16509574 MOAD: ic50=0.7uM
    PDBbind: -logKd/Ki=6.15, IC50=0.7uM
    BindingDB: IC50=400nM
    7360 2gg0:A (1.28) BS03 U11 3.4.11.18 GO:0004177 ... P0AE18 17120228 MOAD: ic50=1.7uM
    PDBbind: -logKd/Ki=5.77, IC50=1.7uM
    BindingDB: IC50=1700nM
    7361 2gg2:A (1.0) BS03 U12 3.4.11.18 GO:0004177 ... P0AE18 17120228 MOAD: ic50=0.25uM
    PDBbind: -logKd/Ki=6.60, IC50=0.25uM
    BindingDB: IC50=250nM
    7362 2gg3:A (1.45) BS03 U13 3.4.11.18 GO:0004177 ... P0AE18 17120228 MOAD: ic50=0.58uM
    PDBbind: -logKd/Ki=6.24, IC50=0.58uM
    BindingDB: IC50=580nM
    7363 2gg5:A (2.12) BS03 U19 3.4.11.18 GO:0004177 ... P0AE18 17120228 MOAD: ic50=0.25uM
    PDBbind: -logKd/Ki=6.60, IC50=0.25uM
    BindingDB: IC50=250nM
    7364 2gg7:A (1.12) BS03 U14 3.4.11.18 GO:0004177 ... P0AE18 17120228 MOAD: ic50=1.75uM
    PDBbind: -logKd/Ki=5.76, IC50=1.75uM
    BindingDB: IC50=1750nM
    7365 2gg8:A (1.8) BS03 U15 3.4.11.18 GO:0004177 ... P0AE18 17120228 MOAD: ic50=25uM
    PDBbind: -logKd/Ki=4.60, IC50=25uM
    7366 2gg9:A (1.05) BS03 U16 3.4.11.18 GO:0004177 ... P0AE18 17120228 MOAD: ic50=3.5uM
    PDBbind: -logKd/Ki=5.46, IC50=3.5uM
    BindingDB: IC50=3500nM
    7367 2gga:A (1.7) BS02 GPJ 2.5.1.19 GO:0003824 ... Q9R4E4 16916934 MOAD: Ki=6mM
    PDBbind: -logKd/Ki=1.96, IC50=11mM
    7368 2ggb:A (2.13) BS03 U17 3.4.11.18 GO:0004177 ... P0AE18 17120228 MOAD: ic50=12uM
    PDBbind: -logKd/Ki=4.92, IC50=12uM
    BindingDB: IC50=12000nM
    7369 2ggd:A (1.7) BS02 GPJ 2.5.1.19 GO:0003824 ... Q9R4E4 16916934 MOAD: ic50=160uM
    PDBbind: -logKd/Ki=3.80, IC50=160uM
    7370 2ggx:A (1.9) BS04 NPJ ? N/A P35247 16636058 MOAD: ic50=0.32mM
    PDBbind: -logKd/Ki=3.49, IC50=0.32mM
    7371 2ggx:B (1.9) BS04 NPJ ? N/A P35247 16636058 MOAD: ic50=0.32mM
    7372 2ggx:C (1.9) BS04 NPJ ? N/A P35247 16636058 MOAD: ic50=0.32mM
    7373 2gh6:A (2.203) BS02 CF3 3.5.1.- GO:0000122 ... Q70I53 17401192 PDBbind: -logKd/Ki=4.95, IC50=11.19uM
    7374 2gh7:A (1.0) BS01 BTN ? GO:0009374 ... P22629 16699183 MOAD: Kd~0.1pM
    PDBbind: -logKd/Ki=13.00, Kd=0.1pM
    BindingDB: Kd=1.000000nM
    7375 2gh7:A (1.0) BS02 BTQ ? GO:0009374 ... P22629 16699183 MOAD: Kd~0.1pM
    7376 2gh7:B (1.0) BS01 BTN ? GO:0009374 ... P22629 16699183 MOAD: Kd~0.1pM
    BindingDB: Kd=1.000000nM
    7377 2gh7:B (1.0) BS02 BTQ ? GO:0009374 ... P22629 16699183 MOAD: Kd~0.1pM
    7378 2ghg:A (3.5) BS01 A53 2.7.11.1 GO:0000077 ... O14757 16644221 PDBbind: -logKd/Ki=8.82, IC50=1.5nM
    BindingDB: Ki=126nM
    7379 2gie:A (2.6) BS01 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.58nM
    7380 2gie:A (2.6) BS02 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.58nM
    7381 2gie:B (2.6) BS01 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.58nM
    7382 2gie:B (2.6) BS02 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.58nM
    7383 2gie:C (2.6) BS01 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.58nM
    7384 2gie:C (2.6) BS02 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.58nM
    7385 2gie:D (2.6) BS01 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.58nM
    7386 2gie:D (2.6) BS02 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.58nM
    7387 2gig:A (1.83) BS01 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=1.03nM
    7388 2gig:A (1.83) BS02 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=1.03nM
    7389 2gig:B (1.83) BS01 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=1.03nM
    7390 2gig:B (1.83) BS02 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=1.03nM
    7391 2gih:A (2.5) BS01 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=1.03nM
    7392 2gih:A (2.5) BS02 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=1.03nM
    7393 2gih:B (2.5) BS01 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=1.03nM
    7394 2gih:B (2.5) BS02 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=1.03nM
    7395 2gii:A (2.3) BS01 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.42nM
    7396 2gii:A (2.3) BS02 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.42nM
    7397 2gii:B (2.3) BS01 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.42nM
    7398 2gii:B (2.3) BS02 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.42nM
    7399 2gij:A (1.93) BS01 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.42nM
    7400 2gij:A (1.93) BS02 dna 3.1.21.4 GO:0003677 ... P17743 16675462 PDBbind: Kd=0.42nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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