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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    41201 6f3b:B (1.4) BS02 CJK 4.2.1.1
    4.2.1.69    		 GO:0004064 ... P00915 29962205 MOAD: Ki=273.3nM
    BindingDB: Ki=273nM
    41202 6f3d:A (2.38) BS01 CJT 2.7.11.1 GO:0000287 ... Q9NWZ3 29398441 PDBbind: -logKd/Ki=8.40, IC50=0.004uM
    BindingDB: IC50=4.0nM
    41203 6f3d:B (2.38) BS01 CJT 2.7.11.1 GO:0000287 ... Q9NWZ3 29398441 BindingDB: IC50=4.0nM
    41204 6f3e:A (2.67) BS01 CJQ 2.7.11.1 GO:0000287 ... Q9NWZ3 29398441 PDBbind: -logKd/Ki=7.15, IC50=0.070uM
    BindingDB: IC50=7.5nM, Ki=7.5nM
    41205 6f3e:B (2.67) BS01 CJQ 2.7.11.1 GO:0000287 ... Q9NWZ3 29398441 BindingDB: IC50=7.5nM, Ki=7.5nM
    41206 6f3f:A (2.41796) BS01 ADP 2.7.10.2 GO:0004672 ... P05480 29234112 PDBbind: -logKd/Ki=4.52, Ki=30uM
    41207 6f3g:A (2.37) BS01 CJN 2.7.11.1 GO:0000287 ... Q9NWZ3 29398441 PDBbind: -logKd/Ki=7.16, IC50=0.069uM
    BindingDB: IC50=69nM
    41208 6f3g:B (2.37) BS01 CJN 2.7.11.1 GO:0000287 ... Q9NWZ3 29398441 BindingDB: IC50=69nM
    41209 6f3i:A (2.14) BS01 CKN 2.7.11.1 GO:0000287 ... Q9NWZ3 29398441 PDBbind: -logKd/Ki=7.68, IC50=0.021uM
    BindingDB: IC50=21nM
    41210 6f3i:B (2.14) BS01 CKN 2.7.11.1 GO:0000287 ... Q9NWZ3 29398441 BindingDB: IC50=21nM
    41211 6f3j:A (2.2) BS03 CKQ 2.4.1.1 GO:0000166 ... P00489 29453094 MOAD: Ki=4.42uM
    41212 6f3l:A (1.9) BS02 CJW 2.4.1.1 GO:0000166 ... P00489 29453094 MOAD: Ki=5.05uM
    BindingDB: Ki=5050nM
    41213 6f3m:A (1.6) BS02 ADN 3.13.2.1 GO:0004013 ... Q9I685 30054521 MOAD: Kd=1.2uM
    41214 6f3m:B (1.6) BS03 ADN 3.13.2.1 GO:0004013 ... Q9I685 30054521 MOAD: Kd=1.2uM
    41215 6f3m:C (1.6) BS02 ADN 3.13.2.1 GO:0004013 ... Q9I685 30054521 MOAD: Kd=1.2uM
    41216 6f3m:D (1.6) BS03 ADN 3.13.2.1 GO:0004013 ... Q9I685 30054521 MOAD: Kd=1.2uM
    41217 6f3n:A (1.85) BS04 ADN 3.13.2.1 GO:0004013 ... Q9I685 30054521 MOAD: Kd=1.2uM
    41218 6f3n:B (1.85) BS05 ADN 3.13.2.1 GO:0004013 ... Q9I685 30054521 MOAD: Kd=1.2uM
    41219 6f3n:C (1.85) BS04 ADN 3.13.2.1 GO:0004013 ... Q9I685 30054521 MOAD: Kd=1.2uM
    41220 6f3n:D (1.85) BS05 ADN 3.13.2.1 GO:0004013 ... Q9I685 30054521 MOAD: Kd=1.2uM
    41221 6f3r:A (1.9) BS02 CKZ 2.4.1.1 GO:0000166 ... P00489 29453094 MOAD: Ki=1.19uM
    41222 6f3s:A (1.9) BS02 CKW 2.4.1.1 GO:0000166 ... P00489 29453094 MOAD: Ki=2.38uM
    41223 6f3u:A (2.2) BS03 CNK 2.4.1.1 GO:0000166 ... P00489 29453094 MOAD: Ki=11.5uM
    41224 6f4h:A (2.0) BS01 rna ? GO:0003676 ... P43332 29880797 PDBbind: Kd=34nM
    41225 6f4h:C (2.0) BS01 rna ? GO:0003676 ... P43332 29880797 PDBbind: Kd=34nM
    41226 6f4h:E (2.0) BS01 rna ? GO:0003676 ... P43332 29880797 PDBbind: Kd=34nM
    41227 6f4n:A (2.541) BS02 AKG 1.14.11.73
    3.4.-.-    		 N/A Q8N371 29563586 PDBbind: -logKd/Ki=5.22, IC50=6uM
    41228 6f4w:A (2.293) BS01 FMC 2.4.2.1 GO:0003824 ... P56463 29430816 MOAD: Kd=2.95uM
    PDBbind: -logKd/Ki=5.53, Kd=2.95uM
    41229 6f4w:A (2.293) BS02 FMC 2.4.2.1 GO:0003824 ... P56463 29430816 MOAD: Kd=2.95uM
    PDBbind: -logKd/Ki=5.53, Kd=2.95uM
    41230 6f4w:B (2.293) BS01 FMC 2.4.2.1 GO:0003824 ... P56463 29430816 MOAD: Kd=2.95uM
    41231 6f4w:B (2.293) BS02 FMC 2.4.2.1 GO:0003824 ... P56463 29430816 MOAD: Kd=2.95uM
    41232 6f4w:C (2.293) BS01 FMC 2.4.2.1 GO:0003824 ... P56463 29430816 MOAD: Kd=2.95uM
    41233 6f4w:C (2.293) BS02 FMC 2.4.2.1 GO:0003824 ... P56463 29430816 MOAD: Kd=2.95uM
    41234 6f4w:D (2.293) BS01 FMC 2.4.2.1 GO:0003824 ... P56463 29430816 MOAD: Kd=2.95uM
    PDBbind: -logKd/Ki=5.53, Kd=2.95uM
    41235 6f4w:D (2.293) BS02 FMC 2.4.2.1 GO:0003824 ... P56463 29430816 MOAD: Kd=2.95uM
    PDBbind: -logKd/Ki=5.53, Kd=2.95uM
    41236 6f4w:E (2.293) BS01 FMC 2.4.2.1 GO:0003824 ... P56463 29430816 MOAD: Kd=2.95uM
    41237 6f4w:E (2.293) BS02 FMC 2.4.2.1 GO:0003824 ... P56463 29430816 MOAD: Kd=2.95uM
    41238 6f4w:F (2.293) BS01 FMC 2.4.2.1 GO:0003824 ... P56463 29430816 MOAD: Kd=2.95uM
    41239 6f4x:A (1.694) BS01 FMC 2.4.2.1 GO:0003824 ... P56463 29430816 MOAD: Kd=10.7uM
    PDBbind: -logKd/Ki=4.97, Kd=10.7uM
    41240 6f4x:B (1.694) BS01 FMC 2.4.2.1 GO:0003824 ... P56463 29430816 MOAD: Kd=10.7uM
    41241 6f4x:B (1.694) BS02 FMC 2.4.2.1 GO:0003824 ... P56463 29430816 MOAD: Kd=10.7uM
    41242 6f4x:C (1.694) BS02 FMC 2.4.2.1 GO:0003824 ... P56463 29430816 MOAD: Kd=10.7uM
    41243 6f4x:C (1.694) BS03 FMC 2.4.2.1 GO:0003824 ... P56463 29430816 MOAD: Kd=10.7uM
    41244 6f4x:D (1.694) BS01 FMC 2.4.2.1 GO:0003824 ... P56463 29430816 MOAD: Kd=10.7uM
    PDBbind: -logKd/Ki=4.97, Kd=10.7uM
    41245 6f4x:D (1.694) BS02 FMC 2.4.2.1 GO:0003824 ... P56463 29430816 MOAD: Kd=10.7uM
    PDBbind: -logKd/Ki=4.97, Kd=10.7uM
    41246 6f4x:F (1.694) BS01 FMC 2.4.2.1 GO:0003824 ... P56463 29430816 MOAD: Kd=10.7uM
    41247 6f4x:F (1.694) BS02 FMC 2.4.2.1 GO:0003824 ... P56463 29430816 MOAD: Kd=10.7uM
    41248 6f57:A (3.098) BS03 SAH 2.1.1.-
    2.1.1.37    		 GO:0008168 ... Q9Y6K1 29414941 BindingDB: IC50=>50000nM
    41249 6f57:D (3.098) BS03 SAH 2.1.1.-
    2.1.1.37    		 GO:0008168 ... Q9Y6K1 29414941 BindingDB: IC50=>50000nM
    41250 6f5h:A (2.16) BS01 CQ5 3.4.19.12 GO:0004843 ... Q93009 29541367 MOAD: ic50=0.087uM
    PDBbind: -logKd/Ki=7.05, IC50=0.09uM
    BindingDB: EC50=320nM, IC50=90nM
    41251 6f5h:B (2.16) BS01 CQ5 3.4.19.12 GO:0004843 ... Q93009 29541367 MOAD: ic50=0.087uM
    BindingDB: EC50=320nM, IC50=90nM
    41252 6f5l:A (1.63) BS04 CQB 3.4.17.21 GO:0004180 ... Q04609 30552009 PDBbind: -logKd/Ki=9.19, IC50=0.65nM
    BindingDB: IC50=0.650000nM
    41253 6f5m:A (2.7) BS02 CQH 3.4.21.37 GO:0000122 ... P08246 30084397 PDBbind: -logKd/Ki=6.30, IC50~0.5uM
    41254 6f5m:A (2.7) BS03 CQH 3.4.21.37 GO:0000122 ... P08246 30084397 PDBbind: -logKd/Ki=6.30, IC50~0.5uM
    41255 6f5u:A (2.07) BS01 CQN ? N/A Q05320 29272110 MOAD: Kd=0.29mM
    PDBbind: -logKd/Ki=3.54, Kd=0.29mM
    41256 6f5u:B (2.07) BS01 CQN ? N/A Q05320 29272110 PDBbind: -logKd/Ki=3.54, Kd=0.29mM
    41257 6f5w:A (1.91) BS01 KG1 ? GO:0046872 ... C7BLE4 29341313 MOAD: Kd=149uM
    PDBbind: -logKd/Ki=3.83, Kd=149uM
    41258 6f5w:A (1.91) BS02 KG1 ? GO:0046872 ... C7BLE4 29341313 MOAD: Kd=149uM
    PDBbind: -logKd/Ki=3.83, Kd=149uM
    41259 6f5w:A (1.91) BS03 KG1 ? GO:0046872 ... C7BLE4 29341313 MOAD: Kd=149uM
    PDBbind: -logKd/Ki=3.83, Kd=149uM
    41260 6f5w:A (1.91) BS04 KG1 ? GO:0046872 ... C7BLE4 29341313 MOAD: Kd=149uM
    PDBbind: -logKd/Ki=3.83, Kd=149uM
    41261 6f5w:A (1.91) BS05 KG1 ? GO:0046872 ... C7BLE4 29341313 MOAD: Kd=149uM
    PDBbind: -logKd/Ki=3.83, Kd=149uM
    41262 6f5w:A (1.91) BS06 KG1 ? GO:0046872 ... C7BLE4 29341313 MOAD: Kd=149uM
    PDBbind: -logKd/Ki=3.83, Kd=149uM
    41263 6f5w:B (1.91) BS01 KG1 ? GO:0046872 ... C7BLE4 29341313 MOAD: Kd=149uM
    41264 6f5w:B (1.91) BS02 KG1 ? GO:0046872 ... C7BLE4 29341313 MOAD: Kd=149uM
    41265 6f5w:B (1.91) BS03 KG1 ? GO:0046872 ... C7BLE4 29341313 MOAD: Kd=149uM
    41266 6f5w:B (1.91) BS04 KG1 ? GO:0046872 ... C7BLE4 29341313 MOAD: Kd=149uM
    41267 6f5w:B (1.91) BS05 KG1 ? GO:0046872 ... C7BLE4 29341313 MOAD: Kd=149uM
    41268 6f6i:A (2.4) BS01 8PR ? N/A Q05320 29272110 MOAD: Kd=0.65mM
    PDBbind: -logKd/Ki=3.19, Kd=0.65mM
    BindingDB: Kd=650000nM
    41269 6f6i:B (2.4) BS01 8PR ? N/A Q05320 29272110 PDBbind: -logKd/Ki=3.19, Kd=0.65mM
    BindingDB: Kd=650000nM
    41270 6f6n:A (2.15) BS01 SRE ? N/A Q05320 29272110 MOAD: Kd=0.95mM
    PDBbind: -logKd/Ki=3.02, Kd=0.95mM
    BindingDB: Kd=950000nM
    41271 6f6n:B (2.15) BS01 SRE ? N/A Q05320 29272110 PDBbind: -logKd/Ki=3.02, Kd=0.95mM
    BindingDB: Kd=950000nM
    41272 6f6r:A (1.8) BS01 CVE 3.4.22.36 GO:0004197 ... P29466 29648825 PDBbind: -logKd/Ki=8.25, IC50=5.6nM
    41273 6f6r:B (1.8) BS01 CVE 3.4.22.36 GO:0004197 ... P29466 29648825 PDBbind: -logKd/Ki=8.25, IC50=5.6nM
    41274 6f6s:A (2.29) BS01 CXQ ? N/A Q05320 29272110 MOAD: Kd=1.3mM
    PDBbind: -logKd/Ki=2.89, Kd=1.30mM
    41275 6f6s:B (2.29) BS01 CXQ ? N/A Q05320 29272110 MOAD: Kd=1.3mM
    PDBbind: -logKd/Ki=2.89, Kd=1.30mM
    41276 6f6s:B (2.29) BS02 CXQ ? N/A Q05320 29272110 MOAD: Kd=1.3mM
    PDBbind: -logKd/Ki=2.89, Kd=1.30mM
    41277 6f6u:A (1.828) BS02 CV8 3.1.4.53 GO:0004114 ... Q08499 29652483 MOAD: ic50=16uM
    PDBbind: -logKd/Ki=4.80, IC50=16uM
    41278 6f6u:B (1.828) BS02 CV8 3.1.4.53 GO:0004114 ... Q08499 29652483 MOAD: ic50=16uM
    41279 6f78:A (1.3) BS01 CVN 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64    		 GO:0001523 ... P42330 29602039 MOAD: ic50=0.26uM
    41280 6f78:B (1.3) BS01 CVN 1.1.1.-
    1.1.1.188
    1.1.1.210
    1.1.1.239
    1.1.1.357
    1.1.1.53
    1.1.1.62
    1.1.1.64    		 GO:0001523 ... P42330 29602039 MOAD: ic50=0.26uM
    41281 6f7b:A (2.0) BS01 CVQ 2.7.11.1 GO:0004672 ... O43683 30429199 PDBbind: -logKd/Ki=8.89, Kd=1.3nM
    41282 6f7c:B (2.002) BS02 CVT ? GO:0000226 ... Q6B856 31655259 PDBbind: -logKd/Ki=5.90, Kd=1.26uM
    41283 6f7g:A (1.656) BS01 CVW ? GO:0003677 ... P0A881 N/A BindingDB: Kd=2.88e+4nM
    41284 6f7g:A (1.656) BS02 CVW ? GO:0003677 ... P0A881 N/A BindingDB: Kd=2.88e+4nM
    41285 6f7g:C (1.656) BS01 CVW ? GO:0003677 ... P0A881 N/A BindingDB: Kd=2.88e+4nM
    41286 6f7g:C (1.656) BS02 CVW ? GO:0003677 ... P0A881 N/A BindingDB: Kd=2.88e+4nM
    41287 6f7i:A (2.43) BS01 CW5 3.4.22.- GO:0004197 ... Q9UDY8 30692685 PDBbind: -logKd/Ki=7.85, IC50=14nM
    41288 6f7q:A (2.6) BS02 CWQ 3.1.1.8 GO:0001540 ... P06276 30031971 PDBbind: -logKd/Ki=8.96, Ki=1.09nM
    41289 6f7q:A (2.6) BS03 CWQ 3.1.1.8 GO:0001540 ... P06276 30031971 PDBbind: -logKd/Ki=8.96, Ki=1.09nM
    41290 6f7q:A (2.6) BS04 CWQ 3.1.1.8 GO:0001540 ... P06276 30031971 PDBbind: -logKd/Ki=8.96, Ki=1.09nM
    41291 6f7q:B (2.6) BS02 CWQ 3.1.1.8 GO:0001540 ... P06276 30031971 PDBbind: -logKd/Ki=8.96, Ki=1.09nM
    41292 6f7q:B (2.6) BS03 CWQ 3.1.1.8 GO:0001540 ... P06276 30031971 PDBbind: -logKd/Ki=8.96, Ki=1.09nM
    41293 6f7q:B (2.6) BS04 CWQ 3.1.1.8 GO:0001540 ... P06276 30031971 PDBbind: -logKd/Ki=8.96, Ki=1.09nM
    41294 6f86:A (1.9) BS01 CWW 5.6.2.2 GO:0003677 ... P0AES6 31257079 MOAD: ic50=0.037uM
    PDBbind: -logKd/Ki=7.43, IC50=37nM
    41295 6f8b:A (1.3) BS03 CXH 3.4.24.26 GO:0004222 ... P14756 29485268 MOAD: ic50=6.6uM
    PDBbind: -logKd/Ki=5.21, IC50=6.2uM
    BindingDB: IC50=6600nM
    41296 6f8b:A (1.3) BS04 CXH 3.4.24.26 GO:0004222 ... P14756 29485268 MOAD: ic50=6.6uM
    PDBbind: -logKd/Ki=5.21, IC50=6.2uM
    BindingDB: IC50=6600nM
    41297 6f8j:A (1.95) BS01 CZ5 5.6.2.2 GO:0003677 ... P0AES6 31257079 MOAD: ic50=0.086uM
    PDBbind: -logKd/Ki=7.07, IC50=86nM
    41298 6f8r:A (1.826) BS01 CZK 3.1.4.53 GO:0004114 ... Q08499 29652483 MOAD: ic50=20uM
    PDBbind: -logKd/Ki=4.70, IC50=20uM
    41299 6f8r:B (1.826) BS01 CZK 3.1.4.53 GO:0004114 ... Q08499 29652483 MOAD: ic50=20uM
    41300 6f8t:A (1.8) BS04 CZT 3.1.4.53 GO:0004114 ... Q08499 29652483 MOAD: ic50=7uM
    PDBbind: -logKd/Ki=5.15, IC50=7uM
    41301 6f8t:B (1.8) BS02 CZT 3.1.4.53 GO:0004114 ... Q08499 29652483 MOAD: ic50=7uM
    41302 6f8u:A (2.1) BS03 CZQ 3.1.4.53 GO:0004114 ... Q08499 29652483 MOAD: ic50=0.8uM
    PDBbind: -logKd/Ki=6.10, IC50=0.8uM
    41303 6f8u:B (2.1) BS02 CZQ 3.1.4.53 GO:0004114 ... Q08499 29652483 MOAD: ic50=0.8uM
    41304 6f8u:B (2.1) BS03 CZQ 3.1.4.53 GO:0004114 ... Q08499 29652483 MOAD: ic50=0.8uM
    41305 6f8v:A (1.85) BS03 D0B 3.1.4.53 GO:0004114 ... Q08499 29652483 MOAD: ic50=16uM
    PDBbind: -logKd/Ki=4.80, IC50=16uM
    41306 6f8v:B (1.85) BS02 D0B 3.1.4.53 GO:0004114 ... Q08499 29652483 MOAD: ic50=16uM
    41307 6f8w:A (1.601) BS02 D0E 3.1.4.53 GO:0004114 ... Q08499 29652483 MOAD: ic50=23uM
    PDBbind: -logKd/Ki=4.64, IC50=23uM
    41308 6f8w:B (1.601) BS03 D0E 3.1.4.53 GO:0004114 ... Q08499 29652483 MOAD: ic50=23uM
    41309 6f8x:A (1.95) BS03 D08 3.1.4.53 GO:0004114 ... Q08499 29652483 MOAD: ic50=17uM
    PDBbind: -logKd/Ki=4.77, IC50=17uM
    41310 6f8x:B (1.95) BS02 D08 3.1.4.53 GO:0004114 ... Q08499 29652483 MOAD: ic50=17uM
    41311 6f90:A (2.4) BS02 MVL ? GO:0005975 ... Q8A325 29717710 PDBbind: -logKd/Ki=6.00, Ki=1.0uM
    41312 6f92:A (1.9) BS02 MVL ? GO:0000224 ... Q8A0Q6 29717710 PDBbind: -logKd/Ki=6.40, Ki=0.4uM
    41313 6f92:D (1.9) BS02 MVL ? GO:0000224 ... Q8A0Q6 29717710 PDBbind: -logKd/Ki=6.40, Ki=0.4uM
    41314 6f94:A (2.35) BS01 D0H 5.6.2.2 GO:0003677 ... P0AES6 31257079 MOAD: ic50=0.099uM
    PDBbind: -logKd/Ki=7.00, IC50=99nM
    41315 6f96:A (2.5) BS01 D0K 5.6.2.2 GO:0003677 ... P0AES6 31257079 MOAD: ic50=0.019uM
    PDBbind: -logKd/Ki=7.72, IC50=19nM
    41316 6f9g:A (2.388) BS01 PUT ? N/A Q88NI1 29758259 MOAD: Kd=2uM
    PDBbind: -logKd/Ki=5.70, Kd=2uM
    41317 6f9g:B (2.388) BS01 PUT ? N/A Q88NI1 29758259 MOAD: Kd=2uM
    41318 6f9g:C (2.388) BS01 PUT ? N/A Q88NI1 29758259 MOAD: Kd=2uM
    41319 6f9g:D (2.388) BS01 PUT ? N/A Q88NI1 29758259 MOAD: Kd=2uM
    41320 6f9g:E (2.388) BS01 PUT ? N/A Q88NI1 29758259 MOAD: Kd=2uM
    41321 6f9r:A (1.85) BS03 D0W 3.4.15.1 GO:0006508 ... P12821 29476645 MOAD: Ki=10.6uM
    PDBbind: -logKd/Ki=4.97, Ki=10.6uM
    BindingDB: Ki=7400nM
    41322 6f9r:B (1.85) BS02 D0W 3.4.15.1 GO:0006508 ... P12821 29476645 MOAD: Ki=10.6uM
    BindingDB: Ki=7400nM
    41323 6f9t:A (1.6) BS03 D0Z 3.4.15.1 GO:0006508 ... P12821 29476645 PDBbind: -logKd/Ki=7.86, Ki=13.8nM
    BindingDB: Ki=14nM
    41324 6f9u:A (1.9) BS03 D0W 3.4.15.1 GO:0006508 ... P12821 29476645 PDBbind: -logKd/Ki=5.13, Ki=7.4uM
    BindingDB: Ki=7400nM
    41325 6f9v:A (1.69) BS02 D0Z 3.4.15.1 GO:0006508 ... P12821 29476645 MOAD: Ki=171.9nM
    PDBbind: -logKd/Ki=6.76, Ki=171.9nM
    BindingDB: Ki=14nM
    41326 6f9v:B (1.69) BS02 D0Z 3.4.15.1 GO:0006508 ... P12821 29476645 MOAD: Ki=171.9nM
    BindingDB: Ki=14nM
    41327 6fa2:A (2.6) BS03 D2W 3.6.5.2 GO:0003924 ... P01116 30093669 PDBbind: -logKd/Ki=6.66, Kd=0.220uM
    41328 6fa3:A (1.82) BS01 D1Z 3.6.5.2 GO:0003924 ... P01116 30093669 MOAD: Kd=0.038uM
    41329 6fa3:B (1.82) BS03 D1Z 3.6.5.2 GO:0003924 ... P01116 30093669 MOAD: Kd=0.038uM
    PDBbind: -logKd/Ki=7.42, Kd=0.038uM
    41330 6fa3:C (1.82) BS03 D1Z 3.6.5.2 GO:0003924 ... P01116 30093669 MOAD: Kd=0.038uM
    41331 6fa3:F (1.82) BS01 D1Z 3.6.5.2 GO:0003924 ... P01116 30093669 MOAD: Kd=0.038uM
    41332 6fa4:A (2.02) BS03 D1W 3.6.5.2 GO:0003924 ... P01116 30093669 MOAD: Kd=0.051uM
    41333 6fa4:B (2.02) BS03 D1W 3.6.5.2 GO:0003924 ... P01116 30093669 MOAD: Kd=0.051uM
    PDBbind: -logKd/Ki=7.29, Kd=0.051uM
    41334 6fa4:D (2.02) BS03 D1W 3.6.5.2 GO:0003924 ... P01116 30093669 MOAD: Kd=0.051uM
    41335 6fa4:F (2.02) BS03 D1W 3.6.5.2 GO:0003924 ... P01116 30093669 MOAD: Kd=0.051uM
    41336 6fa5:A (2.303) BS01 ADP 3.6.4.13 GO:0003676 ... G0SEG4 29968674 MOAD: Kd=179nM
    PDBbind: -logKd/Ki=6.75, Kd=179nM
    41337 6faa:A (1.97) BS01 ADP 3.6.4.13 GO:0003676 ... G0SEG4 29968674 MOAD: Kd=179nM
    PDBbind: -logKd/Ki=6.75, Kd=179nM
    41338 6fac:A (2.05) BS01 ADP 3.6.4.13 GO:0003676 ... G0SEG4 29968674 MOAD: Kd=179nM
    PDBbind: -logKd/Ki=6.75, Kd=179nM
    41339 6faf:A (1.99) BS02 D3B 4.2.1.1
    4.2.1.69    		 GO:0004064 ... P00915 29962205 MOAD: Ki=306.1nM
    PDBbind: -logKd/Ki=6.51, Ki=306.1nM
    BindingDB: Ki=306nM
    41340 6faf:B (1.99) BS02 D3B 4.2.1.1
    4.2.1.69    		 GO:0004064 ... P00915 29962205 MOAD: Ki=306.1nM
    BindingDB: Ki=306nM
    41341 6fag:A (1.79) BS02 EON 4.2.1.1
    4.2.1.69    		 GO:0004064 ... P00915 29962205 PDBbind: -logKd/Ki=6.59, Ki=255.1nM
    BindingDB: Ki=255nM
    41342 6fag:B (1.79) BS02 EON 4.2.1.1
    4.2.1.69    		 GO:0004064 ... P00915 29962205 BindingDB: Ki=255nM
    41343 6fam:A (1.13) BS01 MAN ? GO:0004559 ... D6D1V7 29508463 PDBbind: -logKd/Ki=4.01, Kd=97.7uM
    41344 6fam:A (1.13) BS02 G63 ? GO:0004559 ... D6D1V7 29508463 PDBbind: -logKd/Ki=4.01, Kd=97.7uM
    41345 6fap:B (2.7) BS03 D3H ? N/A Q9UIF9 29529862 PDBbind: -logKd/Ki=2.15, Kd=7.1mM
    41346 6fau:A (1.25) BS02 D3W ? GO:0000122 ... P31947 29722962 PDBbind: -logKd/Ki=5.44, Kd=3.6uM
    41347 6fav:A (1.4) BS02 D3Q ? GO:0000122 ... P31947 29722962 PDBbind: -logKd/Ki=5.33, Kd=4.7uM
    41348 6faw:A (1.4) BS02 D3K ? GO:0000122 ... P31947 29722962 PDBbind: -logKd/Ki=5.57, Kd=2.7uM
    41349 6fb0:A (2.15) BS01 dna 3.1.-.- GO:0004519 ... P05725 29980759 PDBbind: Kd=100nM
    41350 6fb0:A (2.15) BS02 dna 3.1.-.- GO:0004519 ... P05725 29980759 PDBbind: Kd=100nM
    41351 6fb0:B (2.15) BS01 dna 3.1.-.- GO:0004519 ... P05725 29980759 PDBbind: Kd=100nM
    41352 6fb0:B (2.15) BS02 dna 3.1.-.- GO:0004519 ... P05725 29980759 PDBbind: Kd=100nM
    41353 6fba:A (2.0) BS01 D48 2.1.3.2 GO:0004070 ... O15804 29476738 MOAD: Kd=19.9uM
    PDBbind: -logKd/Ki=4.70, Kd=19.9uM
    41354 6fba:B (2.0) BS01 D48 2.1.3.2 GO:0004070 ... O15804 29476738 MOAD: Kd=19.9uM
    PDBbind: -logKd/Ki=4.70, Kd=19.9uM
    41355 6fba:B (2.0) BS02 D48 2.1.3.2 GO:0004070 ... O15804 29476738 MOAD: Kd=19.9uM
    PDBbind: -logKd/Ki=4.70, Kd=19.9uM
    41356 6fba:C (2.0) BS01 D48 2.1.3.2 GO:0004070 ... O15804 29476738 MOAD: Kd=19.9uM
    41357 6fbv:C (3.52) BS01 FI8 2.7.7.6 GO:0000428 ... P9WGY9 29606590 PDBbind: -logKd/Ki=6.52, Kd=0.3uM
    41358 6fbv:D (3.52) BS03 FI8 2.7.7.6 GO:0000287 ... P9WGY7 29606590 PDBbind: -logKd/Ki=6.52, Kd=0.3uM
    41359 6fbv:F (3.52) BS01 FI8 ? GO:0003677 ... P9WGI1 29606590 PDBbind: -logKd/Ki=6.52, Kd=0.3uM
    41360 6fbw:A (1.45) BS02 D4K ? GO:0000122 ... P31947 29722962 PDBbind: -logKd/Ki=4.78, Kd=16.5uM
    41361 6fby:A (1.5) BS02 D4H ? GO:0000122 ... P31947 29722962 PDBbind: -logKd/Ki=5.03, Kd=9.3uM
    41362 6fc8:A (1.61) BS01 D4Q 2.7.11.1 GO:0000077 ... O14757 29301085 MOAD: ic50=0.012uM
    BindingDB: EC50=24nM, IC50=12nM
    41363 6fcf:A (1.85) BS01 D58 2.7.11.1 GO:0000077 ... O14757 29301085 MOAD: ic50=0.006uM
    BindingDB: IC50=6nM, EC50=8.0nM
    41364 6fcj:A (2.49) BS01 D4W 3.6.4.10 GO:0005524 ... P07900 N/A PDBbind: -logKd/Ki=7.15, Kd=71.1nM
    41365 6fck:A (1.9) BS01 D4Z 2.7.11.1 GO:0000077 ... O14757 29301085 MOAD: ic50=0.031uM
    BindingDB: EC50=53nM, IC50=31nM
    41366 6fcl:A (1.5) BS01 AMP 2.4.2.7 GO:0002055 ... P07741 29576532 PDBbind: -logKd/Ki=4.64, Ki=23uM
    41367 6fcl:B (1.5) BS01 AMP 2.4.2.7 GO:0002055 ... P07741 29576532 PDBbind: -logKd/Ki=4.64, Ki=23uM
    41368 6fdc:A (1.45) BS03 DD5 3.1.4.53 GO:0004114 ... Q08499 29652483 MOAD: ic50=2.3uM
    PDBbind: -logKd/Ki=5.64, IC50=2.3uM
    41369 6fdc:B (1.45) BS02 D5N 3.1.4.53 GO:0004114 ... Q08499 29652483 MOAD: ic50=2.3uM
    41370 6fdi:A (1.9) BS02 D5T 3.1.4.53 GO:0004114 ... Q08499 N/A BindingDB: Ki=0.123027nM
    41371 6fdi:B (1.9) BS02 D5T 3.1.4.53 GO:0004114 ... Q08499 N/A BindingDB: Ki=0.123027nM
    41372 6fdi:C (1.9) BS02 D5T 3.1.4.53 GO:0004114 ... Q08499 N/A BindingDB: Ki=0.123027nM
    41373 6fdi:D (1.9) BS02 D5T 3.1.4.53 GO:0004114 ... Q08499 N/A BindingDB: Ki=0.123027nM
    41374 6fdq:A (2.3) BS01 2UQ 3.4.22.- GO:0006508 ... B0B9A0 30028574 PDBbind: -logKd/Ki=3.95, IC50=113uM
    41375 6fds:A (2.2) BS01 D5T 3.1.4.- GO:0004114 ... Q8WQX9 N/A BindingDB: Ki=44nM
    41376 6fds:B (2.2) BS02 D5T 3.1.4.- GO:0004114 ... Q8WQX9 N/A BindingDB: Ki=44nM
    41377 6fdu:B (2.3) BS01 D5W 3.4.22.- GO:0006508 ... B0B9A0 30028574 PDBbind: -logKd/Ki=3.69, IC50=204uM
    41378 6fdw:A (1.96) BS01 D62 3.1.4.- GO:0004114 ... Q8WQX9 N/A BindingDB: Ki=43nM
    41379 6fdw:B (1.96) BS01 D62 3.1.4.- GO:0004114 ... Q8WQX9 N/A BindingDB: Ki=43nM
    41380 6fdx:A (2.31) BS02 D5Z 3.1.4.- GO:0004114 ... Q8WQX9 N/A BindingDB: Ki=25nM
    41381 6fdx:B (2.31) BS02 D5Z 3.1.4.- GO:0004114 ... Q8WQX9 N/A BindingDB: Ki=25nM
    41382 6fdy:U (1.7) BS01 DB8 2.7.11.1 GO:0004672 ... Q6PHR2 N/A BindingDB: Kd=460nM
    41383 6fdy:U (1.7) BS02 DB8 2.7.11.1 GO:0004672 ... Q6PHR2 N/A BindingDB: Kd=460nM
    41384 6fe0:A (1.91) BS02 V90 4.2.1.1 GO:0004089 ... Q16790 29928486 MOAD: Kd=1.1nM
    PDBbind: -logKd/Ki=6.48, Kd=330nM
    BindingDB: Kd=15nM
    41385 6fe0:B (1.91) BS02 V90 4.2.1.1 GO:0004089 ... Q16790 29928486 MOAD: Kd=1.1nM
    BindingDB: Kd=15nM
    41386 6fe0:C (1.91) BS02 V90 4.2.1.1 GO:0004089 ... Q16790 29928486 MOAD: Kd=1.1nM
    BindingDB: Kd=15nM
    41387 6fe0:D (1.91) BS02 V90 4.2.1.1 GO:0004089 ... Q16790 29928486 MOAD: Kd=1.1nM
    BindingDB: Kd=15nM
    41388 6fe1:A (1.95) BS02 V14 4.2.1.1 GO:0004089 ... Q16790 29928486 MOAD: Kd=0.05nM
    PDBbind: -logKd/Ki=8.48, Kd=3.3nM
    BindingDB: Kd=<10.0nM
    41389 6fe1:B (1.95) BS02 V14 4.2.1.1 GO:0004089 ... Q16790 29928486 MOAD: Kd=0.05nM
    BindingDB: Kd=<10.0nM
    41390 6fe1:C (1.95) BS02 V14 4.2.1.1 GO:0004089 ... Q16790 29928486 MOAD: Kd=0.05nM
    BindingDB: Kd=<10.0nM
    41391 6fe1:D (1.95) BS02 V14 4.2.1.1 GO:0004089 ... Q16790 29928486 MOAD: Kd=0.05nM
    BindingDB: Kd=<10.0nM
    41392 6fe3:A (1.62) BS01 D68 3.1.4.- GO:0004114 ... Q8WQX9 N/A BindingDB: Ki=407nM
    41393 6fe5:A (1.52) BS04 D6E 3.4.17.21 GO:0004180 ... Q04609 30552009 PDBbind: -logKd/Ki=9.30, IC50=0.50nM
    BindingDB: Ki=0.580000nM, IC50=0.500000nM
    41394 6fe7:A (2.0) BS02 D62 3.1.4.53 GO:0004114 ... Q08499 N/A BindingDB: Ki=0.354813nM
    41395 6fe7:B (2.0) BS02 D62 3.1.4.53 GO:0004114 ... Q08499 N/A BindingDB: Ki=0.354813nM
    41396 6fe7:C (2.0) BS02 D62 3.1.4.53 GO:0004114 ... Q08499 N/A BindingDB: Ki=0.354813nM
    41397 6fe7:D (2.0) BS02 D62 3.1.4.53 GO:0004114 ... Q08499 N/A BindingDB: Ki=0.354813nM
    41398 6feb:A (1.93) BS01 D5Z 3.1.4.53 GO:0004114 ... Q08499 N/A BindingDB: Ki=0.154882nM
    41399 6feb:A (1.93) BS02 D5Z 3.1.4.53 GO:0004114 ... Q08499 N/A BindingDB: Ki=0.154882nM
    41400 6feb:B (1.93) BS01 D5Z 3.1.4.53 GO:0004114 ... Q08499 N/A BindingDB: Ki=0.154882nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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