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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    3001 1nr6:A (2.1) BS02 DIF 1.14.14.1 GO:0004497 ... P00179 12899620 MOAD: Kd~50uM
    3002 1nrj:B (1.7) BS03 GTP ? N/A P36057 12654246 MOAD: Kd=38nM
    3003 1nrl:A (2.0) BS02 SRL ? GO:0003677 ... O75469 12909012 BindingDB: EC50=440nM
    3004 1nrl:B (2.0) BS02 SRL ? GO:0003677 ... O75469 12909012 BindingDB: EC50=440nM
    3005 1nsg:A (2.2) BS01 RAD 5.2.1.8 GO:0000413 ... P62942 10089303 BindingDB: Ki=4nM, EC50=200nM
    3006 1nt1:A (2.0) BS02 T76 3.4.21.5 GO:0004252 ... P00734 12873514 MOAD: Ki=1.3nM
    PDBbind: -logKd/Ki=8.89, Ki=1.3nM
    BindingDB: Ki=1.3nM
    3007 1ntk:C (2.6) BS03 AY1 ? GO:0005739 ... P00157 12885240 PDBbind: -logKd/Ki=10.49, Kd=32pM
    3008 1nu1:C (3.2) BS03 QNO ? GO:0005739 ... P00157 12885240 PDBbind: -logKd/Ki=7.19, Kd=64nM
    3009 1nu3:A (1.75) BS01 VPR 3.3.2.8 GO:0016787 ... Q9ZAG3 12773375 PDBbind: -logKd/Ki=4.00, Ki=100uM
    3010 1nuo:A (3.1) BS01 4HY ? GO:0003677 ... P10828 12554782 BindingDB: IC50=0.0407nM
    3011 1nv7:A (2.15) BS04 AMP 3.1.3.11 GO:0005737 ... P00636 12595529 BindingDB: IC50=1300nM
    3012 1nv7:B (2.15) BS04 AMP 3.1.3.11 GO:0005737 ... P00636 12595529 BindingDB: IC50=1300nM
    3013 1nvq:A (2.0) BS02 UCN 2.7.11.1 GO:0000077 ... O14757 12244092 MOAD: Ki=5.6nM
    PDBbind: -logKd/Ki=8.25, Ki=5.6nM
    BindingDB: IC50=9.9nM, Ki=5.6nM
    3014 1nvr:A (1.8) BS02 STU 2.7.11.1 GO:0000077 ... O14757 12244092 MOAD: Ki=7.8nM
    PDBbind: -logKd/Ki=8.11, Ki=7.8nM
    3015 1nvs:A (1.8) BS02 UCM 2.7.11.1 GO:0000077 ... O14757 12244092 MOAD: Ki=15nM
    PDBbind: -logKd/Ki=7.82, Ki=15nM
    BindingDB: IC50=15nM
    3016 1nw4:A (2.2) BS01 IMH 2.4.2.1
    2.4.2.44    		 GO:0003824 ... Q8I3X4 14982926 MOAD: Kd=0.86nM
    PDBbind: -logKd/Ki=9.07, Kd=860pM
    3017 1nw4:B (2.2) BS01 IMH 2.4.2.1
    2.4.2.44    		 GO:0003824 ... Q8I3X4 14982926 MOAD: Kd=0.86nM
    PDBbind: -logKd/Ki=9.07, Kd=860pM
    3018 1nw4:C (2.2) BS01 IMH 2.4.2.1
    2.4.2.44    		 GO:0003824 ... Q8I3X4 14982926 MOAD: Kd=0.86nM
    3019 1nw4:D (2.2) BS01 IMH 2.4.2.1
    2.4.2.44    		 GO:0003824 ... Q8I3X4 14982926 MOAD: Kd=0.86nM
    3020 1nw4:E (2.2) BS01 IMH 2.4.2.1
    2.4.2.44    		 GO:0003824 ... Q8I3X4 14982926 MOAD: Kd=0.86nM
    3021 1nw4:F (2.2) BS01 IMH 2.4.2.1
    2.4.2.44    		 GO:0003824 ... Q8I3X4 14982926 MOAD: Kd=0.86nM
    3022 1nw5:A (2.05) BS01 SAM 2.1.1.72 GO:0003676 ... P14751 12732637 MOAD: Kd=6.1uM
    PDBbind: -logKd/Ki=5.21, Kd=6.1uM
    3023 1nw7:A (2.1) BS02 SAH 2.1.1.72 GO:0003676 ... P14751 12732637 MOAD: Kd=8.1uM
    PDBbind: -logKd/Ki=5.09, Kd=8.1uM
    3024 1nwl:A (2.4) BS01 964 3.1.3.48 GO:0004725 ... P18031 12733877 PDBbind: -logKd/Ki=2.39, Ki=4.1mM
    3025 1nxy:A (1.6) BS01 SM2 3.5.2.6 GO:0005515 ... P62593 12859188 PDBbind: -logKd/Ki=7.19, Ki=64nM
    3026 1nxy:A (1.6) BS02 SM2 3.5.2.6 GO:0005515 ... P62593 12859188 PDBbind: -logKd/Ki=7.19, Ki=64nM
    3027 1ny0:A (1.75) BS01 NBF 3.5.2.6 GO:0005515 ... P62593 12859188 PDBbind: -logKd/Ki=5.85, Ki=1.4uM
    3028 1nym:A (1.2) BS01 CXB 3.5.2.6 GO:0005515 ... P62593 12859188 PDBbind: -logKd/Ki=5.40, Ki=4.0uM
    3029 1nyx:A (2.65) BS01 DRF ? GO:0003677 ... P37231 12672231 PDBbind: -logKd/Ki=7.04, IC50=0.092uM
    BindingDB: EC50=575nM, Ki=90nM
    3030 1nyy:A (1.9) BS01 105 3.5.2.6 GO:0005515 ... P62593 12859188 PDBbind: -logKd/Ki=4.68, Ki=21uM
    3031 1nz7:A (2.4) BS01 901 3.1.3.48 GO:0004725 ... P18031 12749891 PDBbind: -logKd/Ki=7.12, Ki=0.076uM
    BindingDB: Ki=76nM
    3032 1nzq:H (2.18) BS03 162 3.4.21.5 GO:0004252 ... P00734 12781189 MOAD: ic50=11nM
    PDBbind: -logKd/Ki=7.96, IC50=11nM
    3033 1nzy:A (1.8) BS02 BCA 3.8.1.7 GO:0003824 ... A5JTM5 8679561 MOAD: Kd=2uM
    3034 1nzy:A (1.8) BS03 BCA 3.8.1.7 GO:0003824 ... A5JTM5 8679561 MOAD: Kd=2uM
    3035 1nzy:B (1.8) BS01 BCA 3.8.1.7 GO:0003824 ... A5JTM5 8679561 MOAD: Kd=2uM
    3036 1nzy:B (1.8) BS04 BCA 3.8.1.7 GO:0003824 ... A5JTM5 8679561 MOAD: Kd=2uM
    3037 1nzy:C (1.8) BS01 BCA 3.8.1.7 GO:0003824 ... A5JTM5 8679561 MOAD: Kd=2uM
    3038 1nzy:C (1.8) BS03 BCA 3.8.1.7 GO:0003824 ... A5JTM5 8679561 MOAD: Kd=2uM
    3039 1o0d:H (2.44) BS02 163 3.4.21.5 GO:0004252 ... P00734 12781189 MOAD: ic50=6.2nM
    PDBbind: -logKd/Ki=8.21, IC50=6.2nM
    3040 1o0f:A (1.5) BS01 A3P 4.6.1.18 GO:0003676 ... P61823 14573867 MOAD: Ki=5uM
    PDBbind: -logKd/Ki=5.30, Ki=5uM
    3041 1o0f:B (1.5) BS01 A3P 4.6.1.18 GO:0003676 ... P61823 14573867 MOAD: Ki=5uM
    3042 1o0h:A (1.2) BS01 ADP 4.6.1.18 GO:0003676 ... P61823 14573867 MOAD: Ki=1.2uM
    PDBbind: -logKd/Ki=5.92, Ki=1.2uM
    3043 1o0h:B (1.2) BS01 ADP 4.6.1.18 GO:0003676 ... P61823 14573867 MOAD: Ki=1.2uM
    3044 1o0m:A (1.5) BS01 U2P 4.6.1.18 GO:0003676 ... P61823 14573867 MOAD: Ki=7.1uM
    PDBbind: -logKd/Ki=5.15, Ki=7.1uM
    BindingDB: Ki=11600nM
    3045 1o0m:B (1.5) BS01 U2P 4.6.1.18 GO:0003676 ... P61823 14573867 MOAD: Ki=7.1uM
    BindingDB: Ki=11600nM
    3046 1o0n:A (1.5) BS01 U3P 4.6.1.18 GO:0003676 ... P61823 14573867 MOAD: Ki=82uM
    PDBbind: -logKd/Ki=4.09, Ki=82uM
    BindingDB: Ki=78500nM
    3047 1o0n:B (1.5) BS01 U3P 4.6.1.18 GO:0003676 ... P61823 14573867 MOAD: Ki=82uM
    BindingDB: Ki=78500nM
    3048 1o0o:A (1.2) BS01 A2P 4.6.1.18 GO:0003676 ... P61823 14573867 MOAD: Ki=8uM
    PDBbind: -logKd/Ki=5.10, Ki=8uM
    3049 1o0o:B (1.2) BS01 A2P 4.6.1.18 GO:0003676 ... P61823 14573867 MOAD: Ki=8uM
    3050 1o1s:B (2.3) BS02 1NH 2.5.1.58 GO:0003824 ... Q02293 12667062 MOAD: Ki=49nM
    PDBbind: -logKd/Ki=7.31, Ki=49nM
    3051 1o2g:H (1.58) BS02 696 3.4.21.5 GO:0004252 ... P00734 12742021 MOAD: Ki=0.76uM
    PDBbind: -logKd/Ki=6.12, Ki=0.76uM
    BindingDB: Ki=760nM
    3052 1o2h:A (1.77) BS02 CR3 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.068uM
    PDBbind: -logKd/Ki=7.17, Ki=0.068uM
    BindingDB: Ki=68nM
    3053 1o2i:A (1.5) BS02 655 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.052uM
    3054 1o2j:A (1.65) BS02 656 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.12uM
    PDBbind: -logKd/Ki=6.92, Ki=0.12uM
    3055 1o2k:A (1.63) BS02 656 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.12uM
    PDBbind: -logKd/Ki=6.92, Ki=0.12uM
    3056 1o2n:A (1.5) BS02 762 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.81uM
    PDBbind: -logKd/Ki=6.09, Ki=0.81uM
    3057 1o2o:A (1.63) BS02 950 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.44uM
    PDBbind: -logKd/Ki=6.36, Ki=0.44uM
    3058 1o2p:A (1.47) BS02 972 3.4.21.4 GO:0004175 ... P00760 12742021 PDBbind: -logKd/Ki=4.85, Ki=14uM
    3059 1o2q:A (1.5) BS02 991 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.021uM
    PDBbind: -logKd/Ki=7.68, Ki=0.021uM
    BindingDB: Ki=21nM
    3060 1o2r:A (1.45) BS02 CR9 3.4.21.4 GO:0004175 ... P00760 12742021 PDBbind: -logKd/Ki=5.21, Ki=6.1uM
    3061 1o2s:A (1.65) BS02 CR4 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=3.4uM
    PDBbind: -logKd/Ki=5.47, Ki=3.4uM
    3062 1o2t:A (1.62) BS02 783 3.4.21.4 GO:0004175 ... P00760 12742021 PDBbind: -logKd/Ki=7.85, Ki=0.014uM
    BindingDB: Ki=14nM
    3063 1o2u:A (1.41) BS02 847 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=1.4uM
    PDBbind: -logKd/Ki=5.85, Ki=1.4uM
    3064 1o2v:A (1.5) BS02 847 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=1.4uM
    PDBbind: -logKd/Ki=5.85, Ki=1.4uM
    3065 1o2w:A (1.38) BS02 847 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=1.4uM
    PDBbind: -logKd/Ki=5.85, Ki=1.4uM
    3066 1o2x:A (1.46) BS02 847 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=1.4uM
    PDBbind: -logKd/Ki=5.85, Ki=1.4uM
    3067 1o2y:A (1.45) BS02 847 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=1.4uM
    PDBbind: -logKd/Ki=5.85, Ki=1.4uM
    3068 1o2z:A (1.65) BS02 312 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.78uM
    PDBbind: -logKd/Ki=6.11, Ki=0.78uM
    3069 1o30:A (1.55) BS02 693 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.17uM
    PDBbind: -logKd/Ki=6.77, Ki=0.17uM
    3070 1o31:A (1.66) BS02 801 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=1.8uM
    3071 1o32:A (1.78) BS02 801 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=1.8uM
    PDBbind: -logKd/Ki=5.74, Ki=1.8uM
    3072 1o33:A (1.46) BS02 801 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=1.8uM
    PDBbind: -logKd/Ki=5.74, Ki=1.8uM
    3073 1o34:A (1.5) BS02 801 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=1.8uM
    PDBbind: -logKd/Ki=5.74, Ki=1.8uM
    3074 1o35:A (1.41) BS02 802 3.4.21.4 GO:0004175 ... P00760 12742021 PDBbind: -logKd/Ki=5.00, Ki=10uM
    3075 1o36:A (1.7) BS02 607 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=1.1uM
    PDBbind: -logKd/Ki=5.96, Ki=1.1uM
    3076 1o37:A (1.45) BS02 653 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.15uM
    PDBbind: -logKd/Ki=6.82, Ki=0.15uM
    3077 1o38:A (1.38) BS02 653 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.15uM
    PDBbind: -logKd/Ki=6.82, Ki=0.15uM
    3078 1o39:A (1.59) BS02 780 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.074uM
    PDBbind: -logKd/Ki=7.13, Ki=0.074uM
    3079 1o3b:A (1.75) BS02 780 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.074uM
    PDBbind: -logKd/Ki=7.13, Ki=0.074uM
    3080 1o3c:A (1.64) BS02 780 3.4.21.4 GO:0004175 ... P00760 12742021 PDBbind: -logKd/Ki=7.13, Ki=0.074uM
    3081 1o3d:A (1.33) BS02 780 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.074uM
    PDBbind: -logKd/Ki=7.13, Ki=0.074uM
    3082 1o3e:A (1.64) BS02 696 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.011uM
    PDBbind: -logKd/Ki=7.96, Ki=0.011uM
    BindingDB: Ki=11nM
    3083 1o3f:A (1.55) BS02 696 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.011uM
    PDBbind: -logKd/Ki=7.96, Ki=0.011uM
    BindingDB: Ki=11nM
    3084 1o3g:A (1.55) BS02 696 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.011uM
    PDBbind: -logKd/Ki=7.96, Ki=0.011uM
    BindingDB: Ki=11nM
    3085 1o3h:A (1.53) BS02 907 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.05uM
    PDBbind: -logKd/Ki=7.30, Ki=0.05uM
    BindingDB: Ki=50nM
    3086 1o3i:A (1.51) BS02 907 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.05uM
    PDBbind: -logKd/Ki=7.30, Ki=0.05uM
    BindingDB: Ki=50nM
    3087 1o3j:A (1.4) BS02 334 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.17uM
    PDBbind: -logKd/Ki=6.77, Ki=0.17uM
    3088 1o3k:A (1.43) BS02 334 3.4.21.4 GO:0004175 ... P00760 12742021 MOAD: Ki=0.17uM
    PDBbind: -logKd/Ki=6.77, Ki=0.17uM
    3089 1o3l:A (1.4) BS02 678 3.4.21.4 GO:0004175 ... P00760 12742021 PDBbind: -logKd/Ki=6.54, Ki=0.29uM
    3090 1o3p:B (1.81) BS02 655 3.4.21.73 GO:0004252 ... P00749 12742021 MOAD: Ki=0.22uM
    PDBbind: -logKd/Ki=6.66, Ki=0.22uM
    3091 1o3s:A (3.0) BS01 dna ? GO:0003677 ... P0ACJ8 11724533 PDBbind: Kd=14pM
    3092 1o3s:A (3.0) BS02 dna ? GO:0003677 ... P0ACJ8 11724533 PDBbind: Kd=14pM
    3093 1o41:A (1.7) BS01 300 2.7.10.2 N/A P12931 14613321 PDBbind: -logKd/Ki=3.05, IC50=0.9mM
    BindingDB: IC50=900000nM
    3094 1o42:A (1.7) BS01 843 2.7.10.2 N/A P12931 14613321 MOAD: ic50=9nM
    PDBbind: -logKd/Ki=8.05, IC50=9nM
    BindingDB: IC50=9nM
    3095 1o43:A (1.5) BS01 821 2.7.10.2 N/A P12931 14613321 PDBbind: -logKd/Ki=5.66, IC50=2.2uM
    3096 1o44:A (1.7) BS01 852 2.7.10.2 N/A P12931 14613321 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3nM
    3097 1o45:A (1.8) BS01 687 2.7.10.2 N/A P12931 14613321 PDBbind: -logKd/Ki=9.60, IC50=0.25nM
    BindingDB: IC50=0.25nM
    3098 1o46:A (2.0) BS01 903 2.7.10.2 N/A P12931 14613321 MOAD: ic50=10nM
    PDBbind: -logKd/Ki=8.00, IC50=10nM
    3099 1o47:A (1.8) BS01 822 2.7.10.2 N/A P12931 14613321 MOAD: ic50=4nM
    PDBbind: -logKd/Ki=8.40, IC50=4nM
    BindingDB: IC50=5nM
    3100 1o48:A (1.55) BS01 853 2.7.10.2 N/A P12931 14613321 MOAD: ic50=450nM
    PDBbind: -logKd/Ki=6.35, IC50=450nM
    BindingDB: IC50=450nM
    3101 1o49:A (1.7) BS01 493 2.7.10.2 N/A P12931 14613321 MOAD: ic50=437nM
    PDBbind: -logKd/Ki=6.36, IC50=437nM
    3102 1o4a:A (1.5) BS01 197 2.7.10.2 N/A P12931 14613321 PDBbind: -logKd/Ki=6.92, IC50=120nM
    3103 1o4b:A (1.85) BS01 876 2.7.10.2 N/A P12931 14613321 MOAD: ic50=2000nM
    PDBbind: -logKd/Ki=5.70, IC50=2uM
    BindingDB: IC50=2000nM
    3104 1o4d:A (1.85) BS01 262 2.7.10.2 N/A P12931 14613321 PDBbind: -logKd/Ki=3.52, IC50=0.3mM
    BindingDB: IC50=200000nM
    3105 1o4e:A (2.0) BS01 299 2.7.10.2 N/A P12931 14613321 PDBbind: -logKd/Ki=3.30, IC50=0.5mM
    BindingDB: IC50=39000nM
    3106 1o4f:A (2.0) BS01 790 2.7.10.2 N/A P12931 14613321 MOAD: ic50=0.3mM
    PDBbind: -logKd/Ki=3.52, IC50=0.3mM
    3107 1o4g:A (1.55) BS01 I59 2.7.10.2 N/A P12931 14613321 MOAD: ic50>5mM
    PDBbind: -logKd/Ki=2.30, IC50>5mM
    3108 1o4h:A (2.25) BS01 772 2.7.10.2 N/A P12931 14613321 MOAD: ic50=3.6mM
    PDBbind: -logKd/Ki=2.44, IC50=3.6mM
    3109 1o4i:A (1.75) BS01 219 2.7.10.2 N/A P12931 14613321 PDBbind: -logKd/Ki=2.64, IC50=2.3mM
    BindingDB: IC50=2300000nM
    3110 1o4j:A (1.7) BS01 IS2 2.7.10.2 N/A P12931 14613321 MOAD: ic50=4.4mM
    PDBbind: -logKd/Ki=2.36, IC50=4.4mM
    BindingDB: IC50=4400000nM
    3111 1o4k:A (1.57) BS01 PSN 2.7.10.2 N/A P12931 14613321 PDBbind: -logKd/Ki=2.92, IC50=1.2mM
    3112 1o4n:A (1.6) BS01 OXD 2.7.10.2 N/A P12931 14613321 MOAD: ic50>40mM
    PDBbind: -logKd/Ki=1.40, IC50>40mM
    3113 1o4o:A (1.7) BS01 HPS 2.7.10.2 N/A P12931 14613321 MOAD: ic50=3.5mM
    PDBbind: -logKd/Ki=2.46, IC50=3.5mM
    BindingDB: IC50=5000000nM
    3114 1o4o:A (1.7) BS02 HPS 2.7.10.2 N/A P12931 14613321 MOAD: ic50=3.5mM
    PDBbind: -logKd/Ki=2.46, IC50=3.5mM
    BindingDB: IC50=5000000nM
    3115 1o4p:A (1.9) BS01 791 2.7.10.2 N/A P12931 14613321 MOAD: ic50=2.5mM
    PDBbind: -logKd/Ki=2.60, IC50=2.5mM
    BindingDB: IC50=200000nM
    3116 1o4q:A (1.7) BS01 256 2.7.10.2 N/A P12931 14613321 MOAD: ic50=3.2mM
    PDBbind: -logKd/Ki=2.49, IC50=3.2mM
    BindingDB: IC50=3230000000nM
    3117 1o4r:A (1.5) BS01 787 2.7.10.2 N/A P12931 14613321 MOAD: ic50=3.9mM
    PDBbind: -logKd/Ki=2.41, IC50=3.9mM
    3118 1o5a:B (1.68) BS02 696 3.4.21.73 GO:0004252 ... P00749 15522303 MOAD: Ki=0.38uM
    PDBbind: -logKd/Ki=6.42, Ki=0.38uM
    BindingDB: Ki=72nM
    3119 1o5b:B (1.85) BS02 ESI 3.4.21.73 GO:0004252 ... P00749 15522303 MOAD: Ki=1.7uM
    PDBbind: -logKd/Ki=5.77, Ki=1.7uM
    BindingDB: Ki=210nM
    3120 1o5c:B (1.63) BS02 CR9 3.4.21.73 GO:0004252 ... P00749 15522303 MOAD: Ki=6uM
    PDBbind: -logKd/Ki=5.22, Ki=6.0uM
    BindingDB: Ki=30nM
    3121 1o5e:H (1.75) BS01 132 3.4.21.106 GO:0004252 ... P05981 15522303 MOAD: Ki=1.8uM
    PDBbind: -logKd/Ki=5.74, Ki=1.8uM
    BindingDB: Ki=1800nM
    3122 1o5f:H (1.78) BS01 CR9 3.4.21.106 GO:0004252 ... P05981 15522303 PDBbind: -logKd/Ki=6.07, Ki=0.85uM
    BindingDB: Ki=850nM
    3123 1o5g:H (1.75) BS02 CR9 3.4.21.5 GO:0004252 ... P00734 15522303 MOAD: Ki=11uM
    PDBbind: -logKd/Ki=4.96, Ki=11uM
    BindingDB: Ki=11000nM
    3124 1o5m:A (2.3) BS01 336 2.5.1.58
    2.5.1.59    		 GO:0004659 ... Q04631 10377218 PDBbind: -logKd/Ki=8.72, IC50=1.9nM
    BindingDB: IC50=1.9nM
    3125 1o5m:B (2.3) BS03 336 2.5.1.58 GO:0003824 ... Q02293 10377218 MOAD: ic50=1.9nM
    PDBbind: -logKd/Ki=8.72, IC50=1.9nM
    3126 1o5p:A (-1.00) BS01 CHR ? GO:0003677 ... P0A3R9 15640161 PDBbind: -logKd/Ki=10.00, Kd=0.1nM
    3127 1o5r:A (2.35) BS02 FR9 3.5.4.4 GO:0004000 ... P56658 15239652 MOAD: Ki=7.5nM
    PDBbind: -logKd/Ki=8.12, Ki=7.5nM
    3128 1o5w:A (3.2) BS02 MLG 1.4.3.21
    1.4.3.4    		 GO:0005739 ... P21396 15050826 BindingDB: IC50=2050nM, Ki=1200nM
    3129 1o5w:B (3.2) BS02 MLG 1.4.3.21
    1.4.3.4    		 GO:0005739 ... P21396 15050826 BindingDB: IC50=2050nM, Ki=1200nM
    3130 1o5w:C (3.2) BS02 MLG 1.4.3.21
    1.4.3.4    		 GO:0005739 ... P21396 15050826 BindingDB: IC50=2050nM, Ki=1200nM
    3131 1o5w:D (3.2) BS02 MLG 1.4.3.21
    1.4.3.4    		 GO:0005739 ... P21396 15050826 BindingDB: IC50=2050nM, Ki=1200nM
    3132 1o6h:A (2.8) BS02 W37 4.2.1.129
    5.4.99.17    		 GO:0005811 ... P33247 12747780 PDBbind: -logKd/Ki=6.73, IC50=186nM
    3133 1o6i:A (1.7) BS01 0HZ 3.2.1.14 GO:0004553 ... P11797 12323074 MOAD: Ki=0.65mM
    PDBbind: -logKd/Ki=3.19, Ki=0.65mM
    3134 1o6i:B (1.7) BS01 0HZ 3.2.1.14 GO:0004553 ... P11797 12323074 MOAD: Ki=0.65mM
    3135 1o6q:A (2.8) BS02 R17 4.2.1.129
    5.4.99.17    		 GO:0005811 ... P33247 12747780 PDBbind: -logKd/Ki=7.64, IC50=23nM
    3136 1o6r:A (2.7) BS02 R19 4.2.1.129
    5.4.99.17    		 GO:0005811 ... P33247 12747780 PDBbind: -logKd/Ki=7.10, IC50=80nM
    3137 1o79:A (2.8) BS01 R23 4.2.1.129
    5.4.99.17    		 GO:0005811 ... P33247 12747780 PDBbind: -logKd/Ki=6.39, IC50=406nM
    3138 1o7o:A (1.97) BS04 UDP 2.4.1.87 GO:0005975 ... P14769 14621997 MOAD: Kd=0.032mM
    PDBbind: -logKd/Ki=4.49, Kd=0.032mM
    3139 1o7o:B (1.97) BS04 UDP 2.4.1.87 GO:0005975 ... P14769 14621997 MOAD: Kd=0.032mM
    3140 1o7q:A (1.3) BS03 UDP 2.4.1.87 GO:0005975 ... P14769 14621997 MOAD: Kd=0.032mM
    3141 1o7q:A (1.3) BS04 UDP 2.4.1.87 GO:0005975 ... P14769 14621997 MOAD: Kd=0.032mM
    3142 1o7q:B (1.3) BS03 UDP 2.4.1.87 GO:0005975 ... P14769 14621997 MOAD: Kd=0.032mM
    3143 1o7q:B (1.3) BS04 UDP 2.4.1.87 GO:0005975 ... P14769 14621997 MOAD: Kd=0.032mM
    3144 1o86:A (2.0) BS03 LPR 3.4.15.1 GO:0006508 ... P12821 12540854 PDBbind: -logKd/Ki=9.57, Ki=0.27nM
    BindingDB: IC50=1.2nM
    3145 1o8b:A (1.25) BS01 ABF 5.3.1.6 GO:0004751 ... P0A7Z0 12517338 MOAD: Ki=2.1mM
    3146 1o8b:B (1.25) BS01 ABF 5.3.1.6 GO:0004751 ... P0A7Z0 12517338 MOAD: Ki=2.1mM
    3147 1o9e:A (2.6) BS01 FSC ? GO:0005737 ... P93343 12606564 PDBbind: -logKd/Ki=4.18, Kd=66uM
    3148 1o9f:A (2.7) BS01 peptide ? GO:0005737 ... P93343 12606564 Manual survey: Kd=0.7uM (12606564)
    3149 1o9f:A (2.7) BS02 FSC ? GO:0005737 ... P93343 12606564 Manual survey: Kd=0.7uM (12606564)
    3150 1o9w:A (1.65) BS01 NAG ? GO:0009289 ... Q99003 12864853 MOAD: Kd=1.18mM
    3151 1oar:H (2.23) BS01 AZN N/A N/A N/A 12610298 MOAD: Kd=40nM
    PDBbind: -logKd/Ki=7.40, Kd=40nM
    3152 1oar:I (2.23) BS01 AZN N/A N/A N/A 12610298 MOAD: Kd=40nM
    3153 1oar:J (2.23) BS01 AZN N/A N/A N/A 12610298 MOAD: Kd=40nM
    3154 1oar:K (2.23) BS01 AZN N/A N/A N/A 12610298 MOAD: Kd=40nM
    3155 1oar:L (2.23) BS01 AZN ? GO:0002250 ... P01724 12610298 PDBbind: -logKd/Ki=7.40, Kd=40nM
    3156 1oau:H (1.8) BS01 DNF N/A N/A N/A 12610298 PDBbind: -logKd/Ki=7.70, Kd=20nM
    3157 1oau:L (1.8) BS01 DNF ? GO:0002250 ... P01724 12610298 PDBbind: -logKd/Ki=7.70, Kd=20nM
    3158 1oay:H (2.66) BS01 FUR N/A N/A N/A 12610298 PDBbind: -logKd/Ki=5.92, Kd=1.2uM
    3159 1oay:L (2.66) BS01 FUR ? GO:0002250 ... P01724 12610298 PDBbind: -logKd/Ki=5.92, Kd=1.2uM
    3160 1oba:A (2.45) BS01 CHT 3.2.1.17 GO:0003796 ... P15057 14527392 MOAD: Kd=3.6mM
    PDBbind: -logKd/Ki=2.44, Kd=3.6mM
    3161 1oba:A (2.45) BS02 CHT 3.2.1.17 GO:0003796 ... P15057 14527392 MOAD: Kd=3.6mM
    PDBbind: -logKd/Ki=2.44, Kd=3.6mM
    3162 1obo:A (1.2) BS01 FMN ? GO:0005515 ... P0A3E0 12682068 MOAD: Kd=6.72nM
    3163 1obo:B (1.2) BS01 FMN ? GO:0005515 ... P0A3E0 12682068 MOAD: Kd=6.72nM
    3164 1obv:A (2.1) BS01 FMN ? GO:0005515 ... P0A3E0 12682068 MOAD: Kd=1.04nM
    3165 1ocn:A (1.31) BS01 IFM 3.2.1.91 GO:0004553 ... Q9C1S9 12744312 PDBbind: -logKd/Ki=6.39, Ki=412nM
    3166 1ocn:A (1.31) BS02 BGC 3.2.1.91 GO:0004553 ... Q9C1S9 12744312 PDBbind: -logKd/Ki=6.39, Ki=412nM
    3167 1ocn:A (1.31) BS03 IFM 3.2.1.91 GO:0004553 ... Q9C1S9 12744312 PDBbind: -logKd/Ki=6.39, Ki=412nM
    3168 1ocn:A (1.31) BS04 BGC 3.2.1.91 GO:0004553 ... Q9C1S9 12744312 PDBbind: -logKd/Ki=6.39, Ki=412nM
    3169 1ocq:A (1.08) BS01 IFM 3.2.1.4 GO:0000272 ... O85465 12812472 PDBbind: -logKd/Ki=5.19, Ki=6.5uM
    3170 1ocq:A (1.08) BS02 BGC 3.2.1.4 GO:0000272 ... O85465 12812472 PDBbind: -logKd/Ki=5.19, Ki=6.5uM
    3171 1odi:A (2.4) BS02 ADN 2.4.2.3 GO:0003824 ... Q5SID9 15046984 MOAD: Kd=62uM
    PDBbind: -logKd/Ki=4.21, Kd=62uM
    3172 1odi:A (2.4) BS03 ADN 2.4.2.3 GO:0003824 ... Q5SID9 15046984 MOAD: Kd=62uM
    PDBbind: -logKd/Ki=4.21, Kd=62uM
    3173 1odi:B (2.4) BS01 ADN 2.4.2.3 GO:0003824 ... Q5SID9 15046984 MOAD: Kd=62uM
    PDBbind: -logKd/Ki=4.21, Kd=62uM
    3174 1odi:B (2.4) BS03 ADN 2.4.2.3 GO:0003824 ... Q5SID9 15046984 MOAD: Kd=62uM
    PDBbind: -logKd/Ki=4.21, Kd=62uM
    3175 1odi:C (2.4) BS03 ADN 2.4.2.3 GO:0003824 ... Q5SID9 15046984 MOAD: Kd=62uM
    3176 1odi:D (2.4) BS02 ADN 2.4.2.3 GO:0003824 ... Q5SID9 15046984 MOAD: Kd=62uM
    3177 1odi:E (2.4) BS02 ADN 2.4.2.3 GO:0003824 ... Q5SID9 15046984 MOAD: Kd=62uM
    3178 1odi:E (2.4) BS03 ADN 2.4.2.3 GO:0003824 ... Q5SID9 15046984 MOAD: Kd=62uM
    3179 1odi:F (2.4) BS03 ADN 2.4.2.3 GO:0003824 ... Q5SID9 15046984 MOAD: Kd=62uM
    3180 1odj:A (2.4) BS02 GMP 2.4.2.3 GO:0003824 ... Q5SID9 15046984 MOAD: Kd=80uM
    PDBbind: -logKd/Ki=4.10, Kd=80uM
    3181 1odj:A (2.4) BS03 GMP 2.4.2.3 GO:0003824 ... Q5SID9 15046984 MOAD: Kd=80uM
    PDBbind: -logKd/Ki=4.10, Kd=80uM
    3182 1odj:B (2.4) BS01 GMP 2.4.2.3 GO:0003824 ... Q5SID9 15046984 MOAD: Kd=80uM
    PDBbind: -logKd/Ki=4.10, Kd=80uM
    3183 1odj:B (2.4) BS03 GMP 2.4.2.3 GO:0003824 ... Q5SID9 15046984 MOAD: Kd=80uM
    PDBbind: -logKd/Ki=4.10, Kd=80uM
    3184 1odj:C (2.4) BS02 GMP 2.4.2.3 GO:0003824 ... Q5SID9 15046984 MOAD: Kd=80uM
    3185 1odj:D (2.4) BS02 GMP 2.4.2.3 GO:0003824 ... Q5SID9 15046984 MOAD: Kd=80uM
    3186 1odj:E (2.4) BS02 GMP 2.4.2.3 GO:0003824 ... Q5SID9 15046984 MOAD: Kd=80uM
    3187 1odj:E (2.4) BS03 GMP 2.4.2.3 GO:0003824 ... Q5SID9 15046984 MOAD: Kd=80uM
    3188 1odj:F (2.4) BS01 GMP 2.4.2.3 GO:0003824 ... Q5SID9 15046984 MOAD: Kd=80uM
    3189 1odj:F (2.4) BS03 GMP 2.4.2.3 GO:0003824 ... Q5SID9 15046984 MOAD: Kd=80uM
    3190 1odw:A (2.1) BS01 0E8 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 N/A MOAD: Ki=100nM
    3191 1ody:A (2.0) BS01 LP1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 9827997 MOAD: Ki=8nM
    PDBbind: -logKd/Ki=8.10, Ki=8nM
    3192 1ody:B (2.0) BS01 LP1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P04585 9827997 PDBbind: -logKd/Ki=8.10, Ki=8nM
    3193 1oe0:A (2.4) BS01 TTP 2.7.1.145 GO:0004136 ... Q9XZT6 12741827 MOAD: Ki=5.3nM
    PDBbind: -logKd/Ki=5.16, IC50=6.9uM
    3194 1oe0:B (2.4) BS01 TTP 2.7.1.145 GO:0004136 ... Q9XZT6 12741827 MOAD: Ki=5.3nM
    3195 1oe0:C (2.4) BS01 TTP 2.7.1.145 GO:0004136 ... Q9XZT6 12741827 MOAD: Ki=5.3nM
    3196 1oe0:D (2.4) BS01 TTP 2.7.1.145 GO:0004136 ... Q9XZT6 12741827 MOAD: Ki=5.3nM
    3197 1oe7:A (1.8) BS01 GSH 2.5.1.18 GO:0004364 ... P30114 12939136 MOAD: Kd=9uM
    PDBbind: -logKd/Ki=5.52, Kd=3uM
    3198 1oe7:B (1.8) BS01 GSH 2.5.1.18 GO:0004364 ... P30114 12939136 MOAD: Kd=9uM
    PDBbind: -logKd/Ki=5.52, Kd=3uM
    3199 1oe8:A (1.65) BS01 GSH 2.5.1.18 GO:0004364 ... P30114 12939136 MOAD: Kd=9uM
    PDBbind: -logKd/Ki=5.52, Kd=3uM
    3200 1oe8:B (1.65) BS01 GSH 2.5.1.18 GO:0004364 ... P30114 12939136 MOAD: Kd=9uM
    PDBbind: -logKd/Ki=5.52, Kd=3uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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