Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    29201 4wf2:A (2.31) BS01 BTX 6.3.4.15 GO:0000976 ... P06709 25746672 PDBbind: -logKd/Ki=8.10, Kd=8.03nM
    BindingDB: Ki=87nM, Kd=1.5nM
    29202 4wf4:B (1.7) BS01 WF4 1.8.4.2 GO:0015036 ... A0A0H2UL03 25556635 MOAD: Kd=777uM
    PDBbind: -logKd/Ki=3.11, Kd=777uM
    29203 4wf5:A (1.45) BS01 WF4 1.8.4.2 GO:0015036 ... A0A0H2UL03 25556635 MOAD: Kd=777uM
    29204 4wf5:A (1.45) BS02 WF4 1.8.4.2 GO:0015036 ... A0A0H2UL03 25556635 MOAD: Kd=777uM
    29205 4wf6:A (2.6521) BS02 407 3.4.24.83 GO:0008237 ... P15917 26492514 PDBbind: -logKd/Ki=6.30, IC50=0.5uM
    BindingDB: IC50=1600nM
    29206 4wg3:A (2.2) BS01 UWA 2.7.11.17 GO:0004672 ... Q9BJF5 N/A BindingDB: IC50=10.8nM
    29207 4wg4:A (2.3) BS01 UWB 2.7.11.17 GO:0004672 ... Q9BJF5 N/A BindingDB: IC50=19.1nM
    29208 4wg5:A (2.3) BS01 UW3 2.7.11.17 GO:0004672 ... Q9BJF5 N/A BindingDB: IC50=19.0nM
    29209 4wgi:A (1.85) BS03 3M6 ? GO:0008643 ... P0AEY0
    Q07820    		 25516789 PDBbind: -logKd/Ki=5.35, IC50=4.5uM
    29210 4wh7:A (1.62) BS01 8H8 3.1.3.48 GO:0004725 ... P30305 25423142 MOAD: ic50>5mM
    PDBbind: -logKd/Ki=2.30, IC50>5mM
    29211 4wh9:A (1.5) BS01 3M8 3.1.3.48 GO:0004725 ... P30305 25423142 MOAD: ic50=2.2mM
    PDBbind: -logKd/Ki=3.00, IC50=1mM
    29212 4whq:A (1.78) BS01 3N8 1.13.11.3 GO:0003824 ... P00436 25548185 PDBbind: -logKd/Ki=4.12, Kd=75uM
    29213 4whr:A (1.58) BS01 3N8 1.13.11.3 GO:0003824 ... P00436 25548185 PDBbind: -logKd/Ki=4.12, Kd=75uM
    29214 4whs:A (1.35) BS01 3N8 1.13.11.3 GO:0003824 ... P00436 25548185 PDBbind: -logKd/Ki=4.12, Kd=75uM
    29215 4whs:A (1.35) BS02 3N8 1.13.11.3 GO:0003824 ... P00436 25548185 PDBbind: -logKd/Ki=4.12, Kd=75uM
    29216 4whu:A (2.11) BS01 3OT 2.3.1.-
    2.3.1.48    		 GO:0004402 ... Q92793 N/A BindingDB: IC50=210nM
    29217 4whw:A (1.345) BS01 3OT ? N/A O60885 N/A BindingDB: IC50=350nM
    29218 4whz:A (1.79) BS01 3NL 2.7.11.24 GO:0004672 ... P53779 25393557 MOAD: ic50<1nM
    PDBbind: -logKd/Ki=9.00, IC50<1nM
    BindingDB: IC50=<1.000000nM
    29219 4wi1:A (1.65) BS01 3O6 6.1.1.15 GO:0000166 ... Q8I5R7 27798837 MOAD: ic50=5uM
    PDBbind: -logKd/Ki=5.30, IC50=5uM
    29220 4wi1:B (1.65) BS01 3O6 6.1.1.15 GO:0000166 ... Q8I5R7 27798837 MOAD: ic50=5uM
    29221 4wiv:A (1.56) BS01 3P2 ? N/A O60885 25314271 MOAD: Kd=550nM
    PDBbind: -logKd/Ki=6.26, Kd=550nM
    BindingDB: IC50=637nM, Kd=550nM
    29222 4wk1:A (1.98) BS01 2BA ? GO:0046872 ... A0A0H2WXZ7 25435171 MOAD: Kd=109nM
    PDBbind: -logKd/Ki=5.89, Kd=1.3uM
    29223 4wk7:A (1.24) BS05 3PQ 3.4.24.82 GO:0004222 ... O75173 25415648 MOAD: ic50=74nM
    PDBbind: -logKd/Ki=7.13, IC50=74nM
    BindingDB: IC50=74nM
    29224 4wkb:A (1.37) BS01 TDI 3.2.2.9 GO:0003824 ... A5F5R2 25806409 MOAD: Ki=2.7pM
    PDBbind: -logKd/Ki=11.57, Ki=2.7pM
    29225 4wkb:B (1.37) BS01 TDI 3.2.2.9 GO:0003824 ... A5F5R2 25806409 MOAD: Ki=2.7pM
    PDBbind: -logKd/Ki=11.57, Ki=2.7pM
    29226 4wkc:A (1.64) BS01 BIG 3.2.2.9 GO:0003824 ... A7ZHQ1 25806409 MOAD: Ki=0.21pM
    PDBbind: -logKd/Ki=12.68, Ki=0.21pM
    29227 4wke:A (1.62) BS05 3PU 3.4.24.82 GO:0004222 ... O75173 25415648 MOAD: ic50=8nM
    PDBbind: -logKd/Ki=8.10, Kd=8nM
    BindingDB: IC50=8.0nM
    29228 4wki:A (1.6) BS05 3PW 3.4.24.82 GO:0004222 ... O75173 25415648 MOAD: ic50=5nM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    BindingDB: IC50=3.0nM
    29229 4wkn:A (2.0) BS01 TDI 3.2.2.30
    3.2.2.9    		 GO:0003824 ... Q9ZMY2 26494017 MOAD: Ki=0.19nM
    PDBbind: -logKd/Ki=9.72, Ki=0.19nM
    29230 4wko:A (1.9) BS01 GMD 3.2.2.30
    3.2.2.9    		 GO:0003824 ... Q9ZMY2 26494017 MOAD: Ki=0.34nM
    29231 4wkp:A (1.58) BS01 3QA 3.2.2.30
    3.2.2.9    		 GO:0003824 ... Q9ZMY2 26494017 PDBbind: -logKd/Ki=9.55, Ki=0.28nM
    29232 4wkp:A (1.58) BS02 3QA 3.2.2.30
    3.2.2.9    		 GO:0003824 ... Q9ZMY2 26494017 PDBbind: -logKd/Ki=9.55, Ki=0.28nM
    29233 4wkp:B (1.58) BS01 3QA 3.2.2.30
    3.2.2.9    		 GO:0003824 ... Q9ZMY2 26494017 PDBbind: -logKd/Ki=9.55, Ki=0.28nM
    29234 4wkp:B (1.58) BS02 3QA 3.2.2.30
    3.2.2.9    		 GO:0003824 ... Q9ZMY2 26494017 PDBbind: -logKd/Ki=9.55, Ki=0.28nM
    29235 4wkt:C (1.782) BS01 BUB 3.5.1.97 GO:0016787 ... Q9I194 25290020 MOAD: Ki=0.00055M
    PDBbind: -logKd/Ki=3.26, Ki=0.55mM
    29236 4wku:B (2.0) BS01 3QJ 3.5.1.97 GO:0016787 ... Q9I194 25290020 PDBbind: -logKd/Ki=5.68, Ki=2.1uM
    29237 4wkv:C (2.1434) BS01 3QK 3.5.1.97 GO:0016787 ... Q9I194 25290020 PDBbind: -logKd/Ki=6.79, Ki=0.161uM
    29238 4wl4:A (1.1) BS02 FC5 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A BindingDB: Ki=285000nM
    29239 4wlb:A (1.702) BS02 3QQ ? GO:0003677 ... P51449 25453817 MOAD: ic50=0.18uM
    PDBbind: -logKd/Ki=6.74, IC50=0.18uM
    BindingDB: IC50=180nM, EC50=520nM
    29240 4wlb:B (1.702) BS02 3QQ ? GO:0003677 ... P51449 25453817 MOAD: ic50=0.18uM
    BindingDB: IC50=180nM, EC50=520nM
    29241 4wm9:A (2.4) BS01 NXL ? GO:0008658 ... Q8RLA6 25406838 PDBbind: -logKd/Ki=6.92, Kd=0.12uM
    29242 4wmc:A (2.3) BS01 NXL 3.5.2.6 GO:0008658 ... Q6XEC0 25406838 PDBbind: -logKd/Ki=8.05, Kd=9nM
    29243 4wmu:A (1.55) BS03 19H ? GO:0005515 ... P0AEX9
    Q07820    		 25909780 MOAD: Kd=0.18uM
    PDBbind: -logKd/Ki=6.74, Kd=0.18uM
    29244 4wmv:A (2.4) BS03 3R4 ? GO:0005515 ... P0AEX9
    Q07820    		 25909780 MOAD: Kd=93uM
    PDBbind: -logKd/Ki=4.03, Kd=93uM
    29245 4wmx:A (2.0) BS03 3R7 ? GO:0005515 ... P0AEX9
    Q07820    		 25909780 MOAD: Kd=14.1uM
    PDBbind: -logKd/Ki=4.85, Kd=14.1uM
    29246 4wmy:A (1.601) BS04 3S6 ? GO:0001934 ... Q8WWA0 26148048 MOAD: Kd=85nM
    PDBbind: -logKd/Ki=7.07, Kd=85nM
    29247 4wmy:B (1.601) BS04 3S6 ? GO:0001934 ... Q8WWA0 26148048 MOAD: Kd=85nM
    29248 4wmz:A (2.05) BS02 TPF ? GO:0004497 ... A6ZSR0 26055382 MOAD: Kd=0.074uM
    29249 4wn0:A (2.2) BS05 G3P ? GO:0005509 ... Q5PPM0 26755729 MOAD: ic50=0.6mM
    PDBbind: -logKd/Ki=3.22, IC50=0.6mM
    29250 4wn1:A (3.13) BS02 3SJ 3.1.4.17 GO:0004114 ... Q9Y233 25515954 PDBbind: -logKd/Ki=8.29, IC50=5.1nM
    29251 4wnk:A (2.42) BS01 453 2.7.11.16 GO:0004672 ... P43249 26032411 MOAD: ic50=0.38uM
    PDBbind: -logKd/Ki=6.42, IC50=0.38uM
    29252 4wnm:A (2.5) BS01 3RT 2.7.10.2 GO:0004672 ... P43405 26756335 MOAD: Ki=18nM
    PDBbind: -logKd/Ki=7.59, IC50=0.026uM
    29253 4wno:A (1.56) BS01 3RF 2.7.11.1 GO:0004672 ... O75385 25551253 MOAD: ic50=160nM
    PDBbind: -logKd/Ki=6.80, IC50=160nM
    29254 4wnp:A (1.88) BS01 3RJ 2.7.11.1 GO:0004672 ... O75385 25551253 MOAD: ic50=8nM
    PDBbind: -logKd/Ki=8.10, IC50=8nM
    29255 4wnp:B (1.88) BS01 3RJ 2.7.11.1 GO:0004672 ... O75385 25551253 MOAD: ic50=8nM
    29256 4wnp:C (1.88) BS01 3RJ 2.7.11.1 GO:0004672 ... O75385 25551253 MOAD: ic50=8nM
    29257 4wnp:D (1.88) BS01 3RJ 2.7.11.1 GO:0004672 ... O75385 25551253 MOAD: ic50=8nM
    29258 4wnt:A (2.6) BS02 AJN 1.14.14.- GO:0004497 ... P10635 25555909 BindingDB: Ki=4.6nM
    29259 4wnt:B (2.6) BS02 AJN 1.14.14.- GO:0004497 ... P10635 25555909 BindingDB: Ki=4.6nM
    29260 4wnu:A (2.26) BS02 QDN 1.14.14.- GO:0004497 ... P10635 25555909 BindingDB: IC50=10.0nM, Ki=30nM
    29261 4wnu:B (2.26) BS02 QDN 1.14.14.- GO:0004497 ... P10635 25555909 BindingDB: IC50=10.0nM, Ki=30nM
    29262 4wnu:C (2.26) BS03 QDN 1.14.14.- GO:0004497 ... P10635 25555909 BindingDB: IC50=10.0nM, Ki=30nM
    29263 4wnu:D (2.26) BS02 QDN 1.14.14.- GO:0004497 ... P10635 25555909 BindingDB: IC50=10.0nM, Ki=30nM
    29264 4wnv:A (2.35) BS02 QI9 1.14.14.- GO:0004497 ... P10635 25555909 BindingDB: IC50=10.0nM, Ki=15000nM
    29265 4wnv:B (2.35) BS02 QI9 1.14.14.- GO:0004497 ... P10635 25555909 BindingDB: IC50=10.0nM, Ki=15000nM
    29266 4wnv:C (2.35) BS03 QI9 1.14.14.- GO:0004497 ... P10635 25555909 BindingDB: IC50=10.0nM, Ki=15000nM
    29267 4wnv:D (2.35) BS02 QI9 1.14.14.- GO:0004497 ... P10635 25555909 BindingDB: IC50=10.0nM, Ki=15000nM
    29268 4wo0:A (1.339) BS01 AGI ? GO:0005179 ... P02766 26249340 BindingDB: IC50=653nM, Kd=250nM
    29269 4wo0:B (1.339) BS01 AGI ? GO:0005179 ... P02766 26249340 BindingDB: IC50=653nM, Kd=250nM
    29270 4wo5:A (2.83) BS01 324 2.7.11.1 GO:0004672 ... P15056 25437913 BindingDB: IC50=13nM, Ki=2.6nM, Kd=100nM
    29271 4wo5:B (2.83) BS01 324 2.7.11.1 GO:0004672 ... P15056 25437913 BindingDB: IC50=13nM, Ki=2.6nM, Kd=100nM
    29272 4woe:A (2.3) BS01 ADP 2.7.3.4 GO:0003824 ... P16641 25837252 MOAD: Kd=3.8uM
    29273 4woe:A (2.3) BS02 ADP 2.7.3.4 GO:0003824 ... P16641 25837252 MOAD: Kd=3.8uM
    29274 4woe:B (2.3) BS01 ADP 2.7.3.4 GO:0003824 ... P16641 25837252 MOAD: Kd=3.8uM
    29275 4woe:B (2.3) BS02 ADP 2.7.3.4 GO:0003824 ... P16641 25837252 MOAD: Kd=3.8uM
    29276 4wop:A (2.393) BS01 CTP 6.3.3.3 GO:0000287 ... P9WPQ5 25801336 MOAD: Kd=17.2uM
    PDBbind: -logKd/Ki=4.76, Kd=17.2uM
    29277 4wop:C (2.393) BS01 CTP 6.3.3.3 GO:0000287 ... P9WPQ5 25801336 MOAD: Kd=17.2uM
    29278 4wop:D (2.393) BS01 CTP 6.3.3.3 GO:0000287 ... P9WPQ5 25801336 MOAD: Kd=17.2uM
    29279 4wot:A (2.93) BS01 3SG 2.7.11.1 GO:0004672 ... O75116 25898023 BindingDB: IC50=1.6nM
    29280 4wot:B (2.93) BS01 3SG 2.7.11.1 GO:0004672 ... O75116 25898023 BindingDB: IC50=1.6nM
    29281 4wot:C (2.93) BS01 3SG 2.7.11.1 GO:0004672 ... O75116 25898023 BindingDB: IC50=1.6nM
    29282 4wot:D (2.93) BS01 3SG 2.7.11.1 GO:0004672 ... O75116 25898023 BindingDB: IC50=1.6nM
    29283 4wov:A (1.8) BS01 3SM 2.7.10.2 GO:0004672 ... P29597 25762719 MOAD: ic50=72nM
    PDBbind: -logKd/Ki=7.14, Ki=72nM
    29284 4wov:B (1.8) BS01 3SM 2.7.10.2 GO:0004672 ... P29597 25762719 MOAD: ic50=72nM
    29285 4wp7:A (1.8) BS01 3SR 1.2.1.19
    1.2.1.28
    1.2.1.3
    1.2.1.36    		 GO:0000166 ... P00352 25634381 MOAD: ic50=0.8uM
    PDBbind: -logKd/Ki=6.10, IC50=0.80uM
    BindingDB: IC50=800nM, Ki=720nM
    29286 4wpf:A (2.202) BS02 3SN ? GO:0003677 ... P51449 25815138 MOAD: ic50=0.25uM
    PDBbind: -logKd/Ki=6.60, IC50=0.25uM
    BindingDB: EC50=69nM, IC50=249nM
    29287 4wpf:D (2.202) BS02 3SN ? GO:0003677 ... P51449 25815138 MOAD: ic50=0.25uM
    BindingDB: EC50=69nM, IC50=249nM
    29288 4wpn:A (1.95) BS01 3ST 1.2.1.19
    1.2.1.28
    1.2.1.3
    1.2.1.36    		 GO:0000166 ... P00352 25634381 MOAD: ic50=0.21uM
    PDBbind: -logKd/Ki=6.68, IC50=210nM
    BindingDB: IC50=210nM, Ki=96nM
    29289 4wq2:A (1.64) BS01 3SU ? GO:0005509 ... P04632 28757975 MOAD: ic50=0.5uM
    PDBbind: -logKd/Ki=6.30, IC50=0.5uM
    29290 4wq2:B (1.64) BS01 3SU ? GO:0005509 ... P04632 28757975 MOAD: ic50=0.5uM
    29291 4wq3:A (1.79) BS05 3SU ? GO:0005509 ... P04632 28757975 MOAD: ic50=0.1uM
    PDBbind: -logKd/Ki=7.00, IC50=0.10uM
    29292 4wq3:A (1.79) BS06 3SU ? GO:0005509 ... P04632 28757975 MOAD: ic50=0.1uM
    PDBbind: -logKd/Ki=7.00, IC50=0.10uM
    29293 4wq3:B (1.79) BS05 3SU ? GO:0005509 ... P04632 28757975 MOAD: ic50=0.1uM
    29294 4wq3:B (1.79) BS06 3SU ? GO:0005509 ... P04632 28757975 MOAD: ic50=0.1uM
    29295 4wq6:A (1.72) BS01 3TQ 2.4.2.12 GO:0005125 ... P43490 25556090 MOAD: ic50=0.026uM
    BindingDB: IC50=9.30nM
    29296 4wq6:B (1.72) BS01 3TQ 2.4.2.12 GO:0005125 ... P43490 25556090 MOAD: ic50=0.026uM
    BindingDB: IC50=9.30nM
    29297 4wqp:A (1.99) BS02 3SX ? GO:0003677 ... P51449 25815138 BindingDB: EC50=57nM, IC50=47nM
    29298 4wqp:B (1.99) BS02 3SX ? GO:0003677 ... P51449 25815138 BindingDB: EC50=57nM, IC50=47nM
    29299 4wqq:A (1.7) BS04 MAN ? GO:0038023 ... Q7M462 25869490 MOAD: Ka=3170M^-1
    29300 4wqq:B (1.7) BS04 MAN ? GO:0038023 ... Q7M462 25869490 MOAD: Ka=3170M^-1
    29301 4wqq:C (1.7) BS04 MAN ? GO:0038023 ... Q7M462 25869490 MOAD: Ka=3170M^-1
    29302 4wqq:D (1.7) BS04 MAN ? GO:0038023 ... Q7M462 25869490 MOAD: Ka=3170M^-1
    29303 4wr7:A (1.5) BS02 3TV 4.2.1.1
    4.2.1.69    		 GO:0004064 ... P00915 26079542 MOAD: Kd=0.002nM
    PDBbind: -logKd/Ki=11.70, Kd=0.002nM
    BindingDB: Kd=0.033nM
    29304 4wr7:B (1.5) BS02 3TV 4.2.1.1
    4.2.1.69    		 GO:0004064 ... P00915 26079542 MOAD: Kd=0.002nM
    BindingDB: Kd=0.033nM
    29305 4wr8:B (2.6) BS01 3TX 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 25697265 PDBbind: -logKd/Ki=6.23, Ki=0.59uM
    BindingDB: Ki=590nM, Kd=260nM
    29306 4wr8:C (2.6) BS01 3TX 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 25697265 PDBbind: -logKd/Ki=6.23, Ki=0.59uM
    BindingDB: Ki=590nM, Kd=260nM
    29307 4wr8:E (2.6) BS01 3TX 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 25697265 BindingDB: Ki=590nM, Kd=260nM
    29308 4wr8:F (2.6) BS01 3TX 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 25697265 BindingDB: Ki=590nM, Kd=260nM
    29309 4wr8:H (2.6) BS01 3TX 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 25697265 BindingDB: Ki=590nM, Kd=260nM
    29310 4wr8:I (2.6) BS01 3TX 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 25697265 BindingDB: Ki=590nM, Kd=260nM
    29311 4wr8:K (2.6) BS01 3TX 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 25697265 BindingDB: Ki=590nM, Kd=260nM
    29312 4wr8:L (2.6) BS01 3TX 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 25697265 BindingDB: Ki=590nM, Kd=260nM
    29313 4wr8:N (2.6) BS01 3TX 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 25697265 BindingDB: Ki=590nM, Kd=260nM
    29314 4wr8:O (2.6) BS01 3TX 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 25697265 BindingDB: Ki=590nM, Kd=260nM
    29315 4wr8:Q (2.6) BS01 3TX 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 25697265 BindingDB: Ki=590nM, Kd=260nM
    29316 4wr8:R (2.6) BS01 3TX 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 25697265 BindingDB: Ki=590nM, Kd=260nM
    29317 4wrb:A (1.81) BS01 3TW 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 25697265 MOAD: Ki=0.65uM
    PDBbind: -logKd/Ki=6.19, Ki=0.65uM
    BindingDB: Ki=570nM
    29318 4wrb:C (1.81) BS01 3TW 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 25697265 PDBbind: -logKd/Ki=6.19, Ki=0.65uM
    BindingDB: Ki=570nM
    29319 4wri:A (1.4) BS01 OKA ? N/A Q2MHR1 25965326 PDBbind: -logKd/Ki=9.01, Kd=0.97nM
    29320 4wrs:A (2.2) BS01 3U1 2.7.11.1 GO:0004672 ... P11309 25597005 MOAD: ic50=0.4nM
    PDBbind: -logKd/Ki=9.40, IC50=0.4nM
    BindingDB: IC50=0.400000nM
    29321 4wsj:A (1.64) BS01 3U3 ? GO:0004560 ... Q8A3I4 29142681 PDBbind: -logKd/Ki=7.33, IC50=46.8nM
    29322 4wsk:A (1.92) BS01 3U2 ? GO:0004560 ... Q8A3I4 29142681 PDBbind: -logKd/Ki=6.43, IC50=371.6nM
    29323 4wsy:A (2.3) BS01 3U5 2.7.11.1 GO:0004672 ... P11309 25616902 MOAD: ic50=0.017uM
    PDBbind: -logKd/Ki=7.77, IC50=0.017uM
    29324 4wt2:A (1.42) BS01 3UD 2.3.2.27 GO:0005634 ... Q00987 25384157 MOAD: Kd=38pM
    PDBbind: -logKd/Ki=10.42, Kd=38pM
    BindingDB: IC50=0.600000nM, Kd=257nM
    29325 4wt6:A (2.3) BS01 3U6 2.7.11.1 GO:0004672 ... P11309 25616902 MOAD: ic50=0.012uM
    PDBbind: -logKd/Ki=7.92, IC50=0.012uM
    BindingDB: IC50=111nM
    29326 4wtu:A (1.85) BS01 3UT 3.4.23.46 GO:0004190 ... P56817 25699151 MOAD: ic50=0.3nM
    PDBbind: -logKd/Ki=9.52, IC50=0.3nM
    BindingDB: IC50=3.0nM
    29327 4wu4:A (2.3) BS01 dna N/A N/A N/A 25897118 PDBbind: Kd=0.39uM
    29328 4wu4:B (2.3) BS01 dna N/A N/A N/A 25897118 PDBbind: Kd=0.39uM
    29329 4wu4:B (2.3) BS02 dna N/A N/A N/A 25897118 PDBbind: Kd=0.39uM
    29330 4wul:A (2.4) BS01 dna N/A N/A N/A 25897118 PDBbind: Kd=21.9uM
    29331 4wul:A (2.4) BS02 dna N/A N/A N/A 25897118 PDBbind: Kd=21.9uM
    29332 4wul:B (2.4) BS01 dna N/A N/A N/A 25897118 PDBbind: Kd=21.9uM
    29333 4wul:B (2.4) BS02 dna N/A N/A N/A 25897118 PDBbind: Kd=21.9uM
    29334 4wup:A (1.75) BS02 3UF 4.2.1.1
    4.2.1.69    		 GO:0004064 ... P00915 26079542 MOAD: Kd=0.15nM
    PDBbind: -logKd/Ki=9.82, Kd=0.15nM
    BindingDB: Kd=790nM
    29335 4wup:B (1.75) BS02 3UF 4.2.1.1
    4.2.1.69    		 GO:0004064 ... P00915 26079542 MOAD: Kd=0.15nM
    BindingDB: Kd=790nM
    29336 4wuq:A (1.75) BS02 3UG 4.2.1.1
    4.2.1.69    		 GO:0004064 ... P00915 26079542 BindingDB: Kd=0.029nM
    29337 4wuq:B (1.75) BS02 3UG 4.2.1.1
    4.2.1.69    		 GO:0004064 ... P00915 26079542 BindingDB: Kd=0.029nM
    29338 4wuy:A (1.63) BS01 3UJ 2.1.1.-
    2.1.1.354    		 GO:0000122 ... Q9NRG4 25825497 MOAD: ic50<15nM
    PDBbind: -logKd/Ki=7.82, IC50<15nM
    BindingDB: IC50=<15nM
    29339 4wuy:A (1.63) BS02 SAH 2.1.1.-
    2.1.1.354    		 GO:0000122 ... Q9NRG4 25825497 BindingDB: IC50=180nM
    29340 4wvl:A (2.41) BS01 3US 2.1.1.360 GO:0031151 ... Q8TEK3 25397901 PDBbind: -logKd/Ki=6.88, Kd=131nM
    29341 4wvo:A (2.251) BS01 3UZ ? GO:0004864 ... O49686 25652827 MOAD: ic50=32nM
    29342 4ww6:A (1.06) BS02 3TV 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 26079542 MOAD: Kd=0.062nM
    PDBbind: -logKd/Ki=10.21, Kd=0.062nM
    BindingDB: Kd=0.91nM
    29343 4ww6:A (1.06) BS03 3TV 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 26079542 MOAD: Kd=0.062nM
    PDBbind: -logKd/Ki=10.21, Kd=0.062nM
    BindingDB: Kd=0.91nM
    29344 4ww8:A (1.42) BS02 VD9 4.2.1.1 GO:0004089 ... O43570 26079542 MOAD: Kd=0.067nM
    PDBbind: -logKd/Ki=10.17, Kd=0.067nM
    BindingDB: Kd=400nM
    29345 4ww8:B (1.42) BS02 VD9 4.2.1.1 GO:0004089 ... O43570 26079542 MOAD: Kd=0.067nM
    BindingDB: Kd=400nM
    29346 4ww8:C (1.42) BS02 VD9 4.2.1.1 GO:0004089 ... O43570 26079542 MOAD: Kd=0.067nM
    BindingDB: Kd=400nM
    29347 4ww8:D (1.42) BS02 VD9 4.2.1.1 GO:0004089 ... O43570 26079542 MOAD: Kd=0.067nM
    BindingDB: Kd=400nM
    29348 4wwn:A (2.7) BS01 3VC 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 25469863 PDBbind: -logKd/Ki=6.07, IC50=0.85uM
    29349 4wwo:A (2.3) BS01 3VD 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 25469863 MOAD: ic50=0.038uM
    PDBbind: -logKd/Ki=7.42, IC50=0.0380uM
    29350 4wwp:A (2.4) BS01 3VE 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 25469863 MOAD: ic50=0.12uM
    PDBbind: -logKd/Ki=6.92, IC50=0.12uM
    29351 4wx4:A (1.03) BS02 3VF 3.4.22.39 GO:0003677 ... B9A5C1 25571794 PDBbind: -logKd/Ki=9.22, IC50=0.0006uM
    29352 4wx6:A (2.15) BS02 3VK 3.4.22.39 GO:0003677 ... B9A5C1 25571794 PDBbind: -logKd/Ki=9.00, IC50<0.001uM
    29353 4wx7:A (2.4) BS02 3VJ 3.4.22.39 GO:0003677 ... B9A5C1 25571794 PDBbind: -logKd/Ki=7.40, IC50=0.04uM
    29354 4wxi:A (2.6) BS01 3VM 3.4.21.27 GO:0004252 ... P03951 25592713 PDBbind: -logKd/Ki=8.08, Ki=8.4nM
    29355 4wy1:A (1.98) BS01 3VO 3.4.23.46 GO:0004190 ... P56817 25695670 MOAD: ic50=5.1uM
    PDBbind: -logKd/Ki=5.29, IC50=5.1uM
    BindingDB: IC50=5100nM
    29356 4wy3:A (1.89) BS01 3X5 2.1.1.-
    2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0008233 ... P0C6X7 25614110 MOAD: ic50=240uM
    PDBbind: -logKd/Ki=3.62, IC50=240uM
    BindingDB: IC50=240000nM
    29357 4wy6:A (2.1) BS01 3VP 3.4.23.46 GO:0004190 ... P56817 25695670 MOAD: ic50=1.07uM
    PDBbind: -logKd/Ki=5.97, IC50=1.07uM
    BindingDB: IC50=1070nM
    29358 4wya:B (2.5) BS02 3VQ 2.6.1.62 GO:0004015 ... P9WQ81 26068403 MOAD: Kd=6.9uM
    29359 4wya:D (2.5) BS01 3VQ 2.6.1.62 GO:0004015 ... P9WQ81 26068403 MOAD: Kd=6.9uM
    29360 4wyc:A (1.7) BS02 3VS 2.6.1.62 GO:0004015 ... P9WQ81 26068403 MOAD: Kd=15uM
    29361 4wyc:A (1.7) BS04 3VS 2.6.1.62 GO:0004015 ... P9WQ81 26068403 MOAD: Kd=15uM
    29362 4wyc:B (1.7) BS02 3VS 2.6.1.62 GO:0004015 ... P9WQ81 26068403 MOAD: Kd=15uM
    29363 4wyc:B (1.7) BS04 3VS 2.6.1.62 GO:0004015 ... P9WQ81 26068403 MOAD: Kd=15uM
    29364 4wyd:A (1.35) BS02 3VR 2.6.1.62 GO:0004015 ... P9WQ81 26068403 MOAD: Kd=11.7uM
    29365 4wyd:A (1.35) BS04 3VR 2.6.1.62 GO:0004015 ... P9WQ81 26068403 MOAD: Kd=11.7uM
    29366 4wyd:B (1.35) BS02 3VR 2.6.1.62 GO:0004015 ... P9WQ81 26068403 MOAD: Kd=11.7uM
    29367 4wyd:B (1.35) BS04 3VR 2.6.1.62 GO:0004015 ... P9WQ81 26068403 MOAD: Kd=11.7uM
    29368 4wye:A (1.75) BS02 3VW 2.6.1.62 GO:0004015 ... P9WQ81 26068403 MOAD: Kd=41.8uM
    29369 4wye:B (1.75) BS01 3VW 2.6.1.62 GO:0004015 ... P9WQ81 26068403 MOAD: Kd=41.8uM
    29370 4wyf:A (2.25) BS01 3VX 2.6.1.62 GO:0004015 ... P9WQ81 26068403 MOAD: Kd=21.7uM
    29371 4wyg:A (1.62) BS02 3W1 2.6.1.62 GO:0004015 ... P9WQ81 26068403 MOAD: Kd=6.8uM
    29372 4wyg:B (1.62) BS03 3W1 2.6.1.62 GO:0004015 ... P9WQ81 26068403 MOAD: Kd=6.8uM
    29373 4wyg:B (1.62) BS04 3W1 2.6.1.62 GO:0004015 ... P9WQ81 26068403 MOAD: Kd=6.8uM
    29374 4wyo:B (2.89) BS01 3W2 6.3.4.14
    6.4.1.2    		 GO:0003989 ... Q00955 25423286 PDBbind: -logKd/Ki=6.95, IC50=111nM
    29375 4wyo:B (2.89) BS02 3W2 6.3.4.14
    6.4.1.2    		 GO:0003989 ... Q00955 25423286 PDBbind: -logKd/Ki=6.95, IC50=111nM
    29376 4wyo:C (2.89) BS01 3W2 6.3.4.14
    6.4.1.2    		 GO:0003989 ... Q00955 25423286 PDBbind: -logKd/Ki=6.95, IC50=111nM
    29377 4wyo:C (2.89) BS02 3W2 6.3.4.14
    6.4.1.2    		 GO:0003989 ... Q00955 25423286 PDBbind: -logKd/Ki=6.95, IC50=111nM
    29378 4wyp:A (1.502) BS01 AMP 4.6.1.18 GO:0003676 ... P61823 26655472 MOAD: Kd=440uM
    PDBbind: -logKd/Ki=3.36, Kd=440uM
    29379 4wyp:B (1.502) BS01 AMP 4.6.1.18 GO:0003676 ... P61823 26655472 MOAD: Kd=440uM
    29380 4wyy:A (1.28) BS01 3VT 3.5.2.6 GO:0008800 ... P24735 27622821 PDBbind: -logKd/Ki=6.00, IC50=1uM
    29381 4wyz:A (1.449) BS01 U3P 4.6.1.18 GO:0003676 ... P61823 26655472 MOAD: Kd=50uM
    PDBbind: -logKd/Ki=4.30, Kd=50uM
    BindingDB: Ki=78500nM
    29382 4wyz:B (1.449) BS01 U3P 4.6.1.18 GO:0003676 ... P61823 26655472 MOAD: Kd=50uM
    BindingDB: Ki=78500nM
    29383 4wz4:A (1.05) BS01 3VU 3.5.2.6 GO:0008800 ... P24735 27622821 PDBbind: -logKd/Ki=6.44, IC50=0.36uM
    29384 4wz5:A (1.6) BS01 3VU 3.5.2.6 GO:0008658 ... P14489 27622821 PDBbind: -logKd/Ki=5.51, IC50=3.1uM
    29385 4wz6:A (2.05) BS01 ATP 5.6.1.6 GO:0005524 ... P13569 26444971 MOAD: Kd=1.4uM
    PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    29386 4wz8:B (2.23) BS01 3W7 6.3.4.14
    6.4.1.2    		 GO:0003989 ... Q00955 25423286 PDBbind: -logKd/Ki=7.21, IC50=62nM
    29387 4wz8:B (2.23) BS02 3W7 6.3.4.14
    6.4.1.2    		 GO:0003989 ... Q00955 25423286 PDBbind: -logKd/Ki=7.21, IC50=62nM
    29388 4wz8:C (2.23) BS01 3W7 6.3.4.14
    6.4.1.2    		 GO:0003989 ... Q00955 25423286 PDBbind: -logKd/Ki=7.21, IC50=62nM
    29389 4wz8:C (2.23) BS02 3W7 6.3.4.14
    6.4.1.2    		 GO:0003989 ... Q00955 25423286 PDBbind: -logKd/Ki=7.21, IC50=62nM
    29390 4wzv:A (1.65) BS01 E40 3.4.24.35 GO:0004222 ... P14780 26263024 MOAD: ic50=0.43nM
    PDBbind: -logKd/Ki=9.37, IC50=0.43nM
    BindingDB: IC50=0.430000nM
    29391 4wzv:A (1.65) BS07 E40 3.4.24.35 GO:0004222 ... P14780 26263024 MOAD: ic50=0.43nM
    PDBbind: -logKd/Ki=9.37, IC50=0.43nM
    BindingDB: IC50=0.430000nM
    29392 4wzv:B (1.65) BS01 E40 3.4.24.35 GO:0004222 ... P14780 26263024 MOAD: ic50=0.43nM
    BindingDB: IC50=0.430000nM
    29393 4wzv:B (1.65) BS02 E40 3.4.24.35 GO:0004222 ... P14780 26263024 MOAD: ic50=0.43nM
    BindingDB: IC50=0.430000nM
    29394 4wzw:A (2.9516) BS01 dna ? GO:0003723 ... Q15397 25512524 PDBbind: Kd=84.1nM
    29395 4x0f:A (3.22) BS02 ROL 3.1.4.53 GO:0004114 ... Q07343 25775568 PDBbind: -logKd/Ki=7.00, Kd=101nM
    29396 4x0f:B (3.22) BS02 ROL 3.1.4.53 GO:0004114 ... Q07343 25775568 PDBbind: -logKd/Ki=7.00, Kd=101nM
    29397 4x0u:A (1.95) BS01 3W9 1.2.1.3
    1.2.1.31
    1.2.1.8    		 GO:0004029 ... P49419 25554827 PDBbind: -logKd/Ki=7.40, Ki=0.04uM
    29398 4x0z:C (1.85) BS01 GAL ? GO:0005198 ... P90498 25855729 PDBbind: -logKd/Ki=3.15, Kd=0.7mM
    29399 4x0z:C (1.85) BS02 SIA ? GO:0005198 ... P90498 25855729 PDBbind: -logKd/Ki=3.15, Kd=0.7mM
    29400 4x11:A (2.3) BS01 SIA ? GO:0005198 ... P90498 25855729 PDBbind: -logKd/Ki=2.22, Kd=6mM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218