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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    27801 4qte:A (1.5) BS01 390 2.7.11.24 GO:0000165 ... P28482 25195011 MOAD: Kd=0.084uM
    BindingDB: Ki=<2nM
    27802 4qtl:A (1.8) BS02 WWO 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25758852 MOAD: Kd=120nM
    PDBbind: -logKd/Ki=6.92, Kd=120nM
    BindingDB: Kd=6.1nM
    27803 4qtn:A (2.8) BS01 NNR ? GO:0005886 ... D2ZZC1 N/A PDBbind: -logKd/Ki=6.85, Kd=142nM
    27804 4quo:A (1.65) BS01 3DZ 3.4.11.2 GO:0004177 ... Q9JYV4 25192493 MOAD: Ki=12nM
    PDBbind: -logKd/Ki=7.92, Ki=12nM
    27805 4quo:A (1.65) BS03 3DZ 3.4.11.2 GO:0004177 ... Q9JYV4 25192493 MOAD: Ki=12nM
    PDBbind: -logKd/Ki=7.92, Ki=12nM
    27806 4qvb:B (2.3) BS01 F42 1.-.-.- GO:0010181 ... O06553 25644473 MOAD: Kd=170uM
    27807 4qvb:B (2.3) BS02 F42 1.-.-.- GO:0010181 ... O06553 25644473 MOAD: Kd=170uM
    27808 4qvc:D (1.99) BS01 rna ? GO:0003723 ... C1IFD2 25670676 PDBbind: Kd=22nM
    27809 4qvd:D (1.972) BS01 rna ? GO:0003723 ... C1IFD2 25670676 PDBbind: Kd=1490nM
    27810 4qvd:E (1.972) BS01 rna ? GO:0003723 ... C1IFD2 25670676 PDBbind: Kd=1490nM
    27811 4qvi:A (1.9) BS01 rna ? GO:0000049 ... P27150 25664749 PDBbind: Kd=0.148uM
    27812 4qvl:H (2.8) BS01 BO2 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=6.53, IC50=0.298uM
    27813 4qvm:H (2.8) BS01 BO2 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=6.35, IC50=0.446uM
    27814 4qvm:I (2.8) BS01 BO2 3.4.25.1 GO:0000502 ... P25451 25599643 PDBbind: -logKd/Ki=6.35, IC50=0.446uM
    27815 4qvn:H (2.9) BS01 BO2 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.10, IC50=7.925uM
    27816 4qvp:H (2.3) BS01 BO2 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=6.05, IC50=0.891uM
    27817 4qvp:I (2.3) BS01 BO2 3.4.25.1 GO:0000502 ... P25451 25599643 PDBbind: -logKd/Ki=6.05, IC50=0.891uM
    27818 4qvq:H (2.6) BS01 BO2 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.20, IC50=6.366uM
    27819 4qvq:I (2.6) BS01 BO2 3.4.25.1 GO:0000502 ... P25451 25599643 PDBbind: -logKd/Ki=5.20, IC50=6.366uM
    27820 4qvv:H (2.8) BS01 BO2 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.15, IC50=7.010uM
    27821 4qvv:I (2.8) BS01 BO2 3.4.25.1 GO:0000502 ... P25451 25599643 PDBbind: -logKd/Ki=5.15, IC50=7.010uM
    27822 4qvw:H (3.0) BS01 BO2 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.38, IC50=4.138uM
    27823 4qvw:I (3.0) BS01 BO2 3.4.25.1 GO:0000502 ... P25451 25599643 PDBbind: -logKd/Ki=5.38, IC50=4.138uM
    27824 4qvx:A (2.1) BS01 3CQ ? GO:0042981 ... Q07817 25313317 MOAD: Ki<0.01nM
    PDBbind: -logKd/Ki=11.00, Ki<0.01nM
    BindingDB: Ki=<0.010000nM
    27825 4qvx:B (2.1) BS01 3CQ ? GO:0042981 ... Q07817 25313317 MOAD: Ki<0.01nM
    BindingDB: Ki=<0.010000nM
    27826 4qvy:H (2.51) BS01 BO2 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.09, IC50=8.037uM
    27827 4qvy:I (2.51) BS01 BO2 3.4.25.1 GO:0000502 ... P25451 25599643 PDBbind: -logKd/Ki=5.09, IC50=8.037uM
    27828 4qw0:H (2.9) BS01 BO2 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.14, IC50=7.192uM
    27829 4qw0:I (2.9) BS01 BO2 3.4.25.1 GO:0000502 ... P25451 25599643 PDBbind: -logKd/Ki=5.14, IC50=7.192uM
    27830 4qw1:H (2.9) BS01 BO2 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=6.11, IC50=0.773uM
    27831 4qw3:H (2.9) BS01 BO2 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=6.61, IC50=0.243uM
    27832 4qw4:H (2.8) BS01 3BV 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=6.95, IC50=0.113uM
    27833 4qw4:H (2.8) BS02 3BV 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=6.95, IC50=0.113uM
    27834 4qw4:Z (2.8) BS01 3BV 3.4.25.1 GO:0000502 ... P23724 25599643 PDBbind: -logKd/Ki=6.95, IC50=0.113uM
    27835 4qw5:H (3.0) BS01 3BV 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=6.35, IC50=0.449uM
    27836 4qw5:H (3.0) BS02 3BV 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=6.35, IC50=0.449uM
    27837 4qw5:Z (3.0) BS01 3BV 3.4.25.1 GO:0000502 ... P23724 25599643 PDBbind: -logKd/Ki=6.35, IC50=0.449uM
    27838 4qw6:H (2.9) BS01 3BV 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.85, IC50=1.397uM
    27839 4qw6:H (2.9) BS02 3BV 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.85, IC50=1.397uM
    27840 4qw6:Z (2.9) BS01 3BV 3.4.25.1 GO:0000502 ... P23724 25599643 PDBbind: -logKd/Ki=5.85, IC50=1.397uM
    27841 4qw7:H (2.7) BS01 3BV 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=6.28, IC50=0.521uM
    27842 4qw7:H (2.7) BS02 3BV 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=6.28, IC50=0.521uM
    27843 4qw7:I (2.7) BS01 3BV 3.4.25.1 GO:0000502 ... P25451 25599643 PDBbind: -logKd/Ki=6.28, IC50=0.521uM
    27844 4qw7:Z (2.7) BS01 3BV 3.4.25.1 GO:0000502 ... P23724 25599643 PDBbind: -logKd/Ki=6.28, IC50=0.521uM
    27845 4qwf:H (3.0) BS01 3BV 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=6.00, IC50=1uM
    27846 4qwf:H (3.0) BS02 3BV 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=6.00, IC50=1uM
    27847 4qwf:Z (3.0) BS01 3BV ? GO:0000502 ... P23724 25599643 PDBbind: -logKd/Ki=6.00, IC50=1uM
    27848 4qwg:H (2.6) BS01 3BV 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.97, IC50=1.069uM
    27849 4qwg:H (2.6) BS02 3BV 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.97, IC50=1.069uM
    27850 4qwg:I (2.6) BS01 3BV ? GO:0000502 ... P25451 25599643 PDBbind: -logKd/Ki=5.97, IC50=1.069uM
    27851 4qwg:Z (2.6) BS01 3BV ? GO:0000502 ... P23724 25599643 PDBbind: -logKd/Ki=5.97, IC50=1.069uM
    27852 4qwi:H (2.6) BS01 3BV 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.36, IC50=4.401uM
    27853 4qwi:H (2.6) BS02 3BV 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.36, IC50=4.401uM
    27854 4qwi:I (2.6) BS01 3BV ? GO:0000502 ... P25451 25599643 PDBbind: -logKd/Ki=5.36, IC50=4.401uM
    27855 4qwi:Z (2.6) BS01 3BV ? GO:0000502 ... P23724 25599643 PDBbind: -logKd/Ki=5.36, IC50=4.401uM
    27856 4qwj:H (2.9) BS01 3BV 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.77, IC50=1.686uM
    27857 4qwj:H (2.9) BS02 3BV 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.77, IC50=1.686uM
    27858 4qwj:I (2.9) BS01 3BV ? GO:0000502 ... P25451 25599643 PDBbind: -logKd/Ki=5.77, IC50=1.686uM
    27859 4qwj:Z (2.9) BS01 3BV ? GO:0000502 ... P23724 25599643 PDBbind: -logKd/Ki=5.77, IC50=1.686uM
    27860 4qwk:H (2.8) BS01 3BV 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=6.27, IC50=0.543uM
    27861 4qwk:H (2.8) BS02 3BV 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=6.27, IC50=0.543uM
    27862 4qwk:Z (2.8) BS01 3BV ? GO:0000502 ... P23724 25599643 PDBbind: -logKd/Ki=6.27, IC50=0.543uM
    27863 4qwl:H (2.6) BS01 3BV 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=6.18, IC50=0.661uM
    27864 4qwl:H (2.6) BS02 3BV 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=6.18, IC50=0.661uM
    27865 4qwl:I (2.6) BS01 3BV ? GO:0000502 ... P25451 25599643 PDBbind: -logKd/Ki=6.18, IC50=0.661uM
    27866 4qwl:Z (2.6) BS01 3BV ? GO:0000502 ... P23724 25599643 PDBbind: -logKd/Ki=6.18, IC50=0.661uM
    27867 4qwr:H (2.9) BS01 3BV 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.93, IC50=1.184uM
    27868 4qwr:H (2.9) BS02 3BV 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.93, IC50=1.184uM
    27869 4qwr:I (2.9) BS01 3BV 3.4.25.1 GO:0000502 ... P25451 25599643 PDBbind: -logKd/Ki=5.93, IC50=1.184uM
    27870 4qwr:Z (2.9) BS01 3BV 3.4.25.1 GO:0000502 ... P23724 25599643 PDBbind: -logKd/Ki=5.93, IC50=1.184uM
    27871 4qws:H (3.0) BS01 3BV 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=6.50, IC50=0.316uM
    27872 4qws:H (3.0) BS02 3BV 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=6.50, IC50=0.316uM
    27873 4qws:Z (3.0) BS01 3BV 3.4.25.1 GO:0000502 ... P23724 25599643 PDBbind: -logKd/Ki=6.50, IC50=0.316uM
    27874 4qwu:H (3.0) BS01 BO2 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.51, IC50=3.120uM
    27875 4qwx:H (2.9) BS01 04C 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=6.27, IC50=0.540uM
    27876 4qx4:A (1.259) BS02 3E2 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54    		 GO:0001523 ... P15121 25695864 MOAD: ic50=0.097uM
    27877 4qx4:A (1.259) BS03 3E2 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54    		 GO:0001523 ... P15121 25695864 MOAD: ic50=0.097uM
    27878 4qxi:A (0.867) BS02 I98 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54    		 GO:0001523 ... P15121 25919404 MOAD: ic50=1.3uM
    27879 4qxj:H (2.8) BS01 04C 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.90, IC50=1.265uM
    27880 4qxm:A (2.196) BS02 713 1.3.1.9 GO:0004318 ... P9WGR1 26934341 MOAD: ic50=0.05uM
    BindingDB: IC50=40nM, Ki=50nM
    27881 4qxm:C (2.196) BS02 713 1.3.1.9 GO:0004318 ... P9WGR1 26934341 MOAD: ic50=0.05uM
    BindingDB: IC50=40nM, Ki=50nM
    27882 4qxo:A (1.88) BS01 1YE ? GO:0002218 ... Q86WV6 25199835 MOAD: Kd=3.12uM
    PDBbind: -logKd/Ki=5.51, Kd=3.12uM
    27883 4qxq:A (2.42) BS01 1YE ? GO:0002218 ... Q86WV6 25199835 MOAD: Kd=1.99uM
    PDBbind: -logKd/Ki=5.70, Kd=1.99uM
    27884 4qxq:A (2.42) BS02 1YE ? GO:0002218 ... Q86WV6 25199835 MOAD: Kd=1.99uM
    PDBbind: -logKd/Ki=5.70, Kd=1.99uM
    27885 4qxq:B (2.42) BS01 1YE ? GO:0002218 ... Q86WV6 25199835 MOAD: Kd=1.99uM
    PDBbind: -logKd/Ki=5.70, Kd=1.99uM
    27886 4qxq:B (2.42) BS02 1YE ? GO:0002218 ... Q86WV6 25199835 MOAD: Kd=1.99uM
    PDBbind: -logKd/Ki=5.70, Kd=1.99uM
    27887 4qxr:A (2.37) BS01 1YE ? GO:0002218 ... Q86WV6 25199835 MOAD: Kd=0.99uM
    PDBbind: -logKd/Ki=6.00, Kd=0.99uM
    27888 4qxr:A (2.37) BS02 1YE ? GO:0002218 ... Q86WV6 25199835 MOAD: Kd=0.99uM
    PDBbind: -logKd/Ki=6.00, Kd=0.99uM
    27889 4qxr:B (2.37) BS01 1YE ? GO:0002218 ... Q86WV6 25199835 MOAD: Kd=0.99uM
    PDBbind: -logKd/Ki=6.00, Kd=0.99uM
    27890 4qxr:B (2.37) BS02 1YE ? GO:0002218 ... Q86WV6 25199835 MOAD: Kd=0.99uM
    PDBbind: -logKd/Ki=6.00, Kd=0.99uM
    27891 4qxs:F (1.9) BS02 WC1 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 25630225 MOAD: ic50=1.1uM
    PDBbind: -logKd/Ki=5.96, IC50=1.1uM
    BindingDB: IC50=1100nM
    27892 4qxv:A (1.12) BS01 LU2 ? GO:0005179 ... P02766 26020516 BindingDB: IC50=7000nM, Kd=70nM
    27893 4qxv:B (1.12) BS01 LU2 ? GO:0005179 ... P02766 26020516 BindingDB: IC50=7000nM, Kd=70nM
    27894 4qy3:A (1.5) BS02 3G1 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25407638 MOAD: Ki=0.15uM
    PDBbind: -logKd/Ki=6.82, Ki=0.15uM
    27895 4qya:A (1.7) BS01 LU2 ? GO:0005179 ... P02766 26020516 BindingDB: IC50=7000nM, Kd=70nM
    27896 4qya:B (1.7) BS01 LU2 ? GO:0005179 ... P02766 26020516 BindingDB: IC50=7000nM, Kd=70nM
    27897 4qye:A (2.05) BS01 3DL 2.7.11.1 GO:0000077 ... O14757 25453805 MOAD: ic50=1.2uM
    PDBbind: -logKd/Ki=5.92, IC50=1.2uM
    BindingDB: IC50=1200nM
    27898 4qyg:A (1.75) BS01 3DW 2.7.11.1 GO:0000077 ... O14757 25453805 MOAD: ic50=0.0041uM
    PDBbind: -logKd/Ki=8.39, IC50=4.1nM
    BindingDB: IC50=>10000nM
    27899 4qyg:B (1.75) BS01 3DW 2.7.11.1 GO:0000077 ... O14757 25453805 MOAD: ic50=0.0041uM
    BindingDB: IC50=>10000nM
    27900 4qyh:A (1.9) BS01 3DX 2.7.11.1 GO:0000077 ... O14757 25453805 MOAD: ic50=0.0013uM
    PDBbind: -logKd/Ki=8.89, IC50=1.3nM
    BindingDB: IC50=1.3nM, EC50=98nM
    27901 4qyh:B (1.9) BS01 3DX 2.7.11.1 GO:0000077 ... O14757 25453805 MOAD: ic50=0.0013uM
    BindingDB: IC50=1.3nM, EC50=98nM
    27902 4qyn:A (1.19) BS01 RTL ? GO:0005501 ... P50120 25478840 MOAD: Kd=2nM
    27903 4qyn:B (1.19) BS01 RTL ? GO:0005501 ... P50120 25478840 MOAD: Kd=2nM
    27904 4qyy:A (1.65) BS01 3G7 2.7.11.24 GO:0000165 ... P63086 25313996 MOAD: Kd=0.05uM
    PDBbind: -logKd/Ki=7.30, Kd=0.05uM
    27905 4qz0:H (3.0) BS01 04C 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.46, IC50=3.502uM
    27906 4qz1:H (3.0) BS01 04C 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.44, IC50=3.658uM
    27907 4qz2:H (2.7) BS01 04C 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.21, IC50=6.167uM
    27908 4qz3:H (2.8) BS01 04C 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.51, IC50=3.085uM
    27909 4qz4:H (3.0) BS01 04C 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.01, IC50=9.830uM
    27910 4qz5:H (2.8) BS01 04C 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.26, IC50=5.452uM
    27911 4qz6:H (2.9) BS01 04C 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.53, IC50=2.979uM
    27912 4qz7:H (2.8) BS01 04C 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.65, IC50=2.262uM
    27913 4qzs:A (1.45) BS01 JQ1 ? N/A O60885 25290579 MOAD: Kd=89nM
    PDBbind: -logKd/Ki=7.05, Kd=89nM
    27914 4qzt:A (1.9) BS01 RTL ? GO:0005501 ... P50120 25478840 MOAD: Kd=2nM
    27915 4qzt:C (1.9) BS01 RTL ? GO:0005501 ... P50120 25478840 MOAD: Kd=2nM
    27916 4qzu:A (1.5) BS01 RTL ? GO:0005501 ... P50120 25478840 MOAD: Kd=2nM
    27917 4qzu:B (1.5) BS01 RTL ? GO:0005501 ... P50120 25478840 MOAD: Kd=2nM
    27918 4qzu:C (1.5) BS01 RTL ? GO:0005501 ... P50120 25478840 MOAD: Kd=2nM
    27919 4qzw:H (3.0) BS01 04C 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=5.15, IC50=7.155uM
    27920 4qzx:H (2.6) BS01 04C 3.4.25.1 GO:0004298 ... P25043 25599643 PDBbind: -logKd/Ki=6.26, IC50=0.553uM
    27921 4r02:K (2.5) BS01 3E5 3.4.25.1 GO:0004298 ... P30656 25087721 PDBbind: -logKd/Ki=7.41, IC50=39nM
    27922 4r02:L (2.5) BS01 3E5 3.4.25.1 GO:0000502 ... P23724 25087721 PDBbind: -logKd/Ki=7.41, IC50=39nM
    27923 4r06:A (2.22) BS01 3E7 ? GO:0003677 ... P37231 26579553 MOAD: Kd=565nM
    PDBbind: -logKd/Ki=6.29, Kd=513nM
    BindingDB: IC50=7nM
    27924 4r07:A (2.0) BS02 URI ? GO:0002224 ... Q9NR97 25599397 MOAD: Kd=55uM
    27925 4r07:A (2.0) BS03 UCG ? GO:0002224 ... Q9NR97 25599397 MOAD: Kd=4.8uM
    PDBbind: -logKd/Ki=5.32, Kd=4.8uM
    27926 4r07:A (2.0) BS04 URI ? GO:0002224 ... Q9NR97 25599397 MOAD: Kd=55uM
    27927 4r07:B (2.0) BS01 URI ? GO:0002224 ... Q9NR97 25599397 MOAD: Kd=55uM
    27928 4r07:B (2.0) BS02 URI ? GO:0002224 ... Q9NR97 25599397 MOAD: Kd=55uM
    27929 4r07:B (2.0) BS03 UCG ? GO:0002224 ... Q9NR97 25599397 MOAD: Kd=4.8uM
    27930 4r07:C (2.0) BS01 URI ? GO:0002224 ... Q9NR97 25599397 MOAD: Kd=55uM
    27931 4r07:C (2.0) BS02 UCG ? GO:0002224 ... Q9NR97 25599397 MOAD: Kd=4.8uM
    27932 4r07:C (2.0) BS03 URI ? GO:0002224 ... Q9NR97 25599397 MOAD: Kd=55uM
    27933 4r07:D (2.0) BS01 URI ? GO:0002224 ... Q9NR97 25599397 MOAD: Kd=55uM
    27934 4r07:D (2.0) BS02 URI ? GO:0002224 ... Q9NR97 25599397 MOAD: Kd=55uM
    27935 4r07:D (2.0) BS03 UCG ? GO:0002224 ... Q9NR97 25599397 MOAD: Kd=4.8uM
    27936 4r08:A (2.4) BS01 URI ? GO:0002224 ... Q9NR97 25599397 MOAD: Kd=55uM
    27937 4r08:A (2.4) BS03 URI ? GO:0002224 ... Q9NR97 25599397 MOAD: Kd=55uM
    27938 4r08:B (2.4) BS01 URI ? GO:0002224 ... Q9NR97 25599397 MOAD: Kd=55uM
    27939 4r08:B (2.4) BS02 URI ? GO:0002224 ... Q9NR97 25599397 MOAD: Kd=55uM
    27940 4r08:C (2.4) BS02 URI ? GO:0002224 ... Q9NR97 25599397 MOAD: Kd=55uM
    27941 4r08:C (2.4) BS03 URI ? GO:0002224 ... Q9NR97 25599397 MOAD: Kd=55uM
    27942 4r08:D (2.4) BS01 URI ? GO:0002224 ... Q9NR97 25599397 MOAD: Kd=55uM
    27943 4r08:D (2.4) BS02 URI ? GO:0002224 ... Q9NR97 25599397 MOAD: Kd=55uM
    27944 4r0a:A (1.9) BS01 URI ? GO:0002224 ... Q9NR97 25599397 MOAD: Kd=55uM
    PDBbind: -logKd/Ki=4.26, Kd=55uM
    27945 4r0i:A (1.9) BS02 3KM 3.4.21.109 GO:0004252 ... Q9Y5Y6 25556099 MOAD: Ki=0.3uM
    PDBbind: -logKd/Ki=6.52, Ki=0.3uM
    27946 4r17:K (2.1) BS01 3K4 3.4.25.1 GO:0004298 ... P30656 25244435 PDBbind: -logKd/Ki=7.68, IC50=21nM
    27947 4r18:K (2.4) BS01 ABA 3.4.25.1 GO:0004298 ... P30656 25244435 PDBbind: -logKd/Ki=7.68, IC50=21nM
    27948 4r1v:A (1.2) BS01 3E8 2.7.10.1 GO:0004672 ... P08581 25736998 MOAD: ic50<1nM
    PDBbind: -logKd/Ki=9.00, IC50<1nM
    BindingDB: IC50=<100nM
    27949 4r1y:A (2.0) BS01 3EH 2.7.10.1 GO:0004672 ... P08581 25736998 MOAD: ic50=400nM
    PDBbind: -logKd/Ki=6.40, IC50=400nM
    BindingDB: IC50=400nM
    27950 4r22:B (2.6) BS01 dna ? GO:0003677 ... G2RUZ1 25691471 PDBbind: Kd=11.6nM
    27951 4r2u:A (2.3) BS01 3JX ? GO:0003677 ... P37231 26068133 BindingDB: IC50=80nM, EC50=4288nM
    27952 4r2u:D (2.3) BS01 3JX ? GO:0003677 ... P37231 26068133 BindingDB: IC50=80nM, EC50=4288nM
    27953 4r3b:A (1.366) BS02 3GE 3.5.2.6 GO:0008800 ... P0AD64 25536850 PDBbind: -logKd/Ki=6.25, Ki=0.56uM
    27954 4r3c:A (2.06) BS01 GG5 2.7.11.24 GO:0000077 ... Q16539 25676389 BindingDB: Ki=600nM, IC50=67nM
    27955 4r3c:A (2.06) BS02 3GF 2.7.11.24 GO:0000077 ... Q16539 25676389 PDBbind: -logKd/Ki=7.00, Ki=101nM
    BindingDB: Ki=100nM, IC50=230nM
    27956 4r3c:A (2.06) BS03 3GF 2.7.11.24 GO:0000077 ... Q16539 25676389 PDBbind: -logKd/Ki=7.00, Ki=101nM
    BindingDB: Ki=100nM, IC50=230nM
    27957 4r3i:A (1.8) BS01 rna ? GO:0003723 ... Q96MU7 25242552 PDBbind: Kd=2uM
    27958 4r3n:A (1.35) BS02 3GQ 1.2.1.11 GO:0000166 ... Q8DQ00 25478842 MOAD: Ki=1mM
    27959 4r3n:B (1.35) BS03 3GQ 1.2.1.11 GO:0000166 ... Q8DQ00 25478842 MOAD: Ki=1mM
    27960 4r3w:A (1.91) BS01 3GQ N/A GO:0004073 ... N/A 25478842 MOAD: Ki=1mM
    27961 4r3w:A (1.91) BS02 A2P N/A GO:0004073 ... N/A 25478842 MOAD: Ki=1mM
    PDBbind: -logKd/Ki=3.00, Ki=1.0mM
    27962 4r3w:B (1.91) BS01 A2P N/A GO:0004073 ... N/A 25478842 MOAD: Ki=1mM
    27963 4r41:A (1.61) BS01 4NO N/A GO:0004073 ... N/A 25478842 MOAD: Ki=0.27mM
    27964 4r41:B (1.61) BS01 4NO N/A GO:0004073 ... N/A 25478842 MOAD: Ki=0.27mM
    27965 4r43:A (1.8) BS01 GDP 4.1.1.32 GO:0004611 ... P9WIH3 25798914 MOAD: Kd=9.3uM
    27966 4r4c:A (1.4) BS01 3HS ? GO:0003677 ... P27694 25699140 PDBbind: -logKd/Ki=5.54, Kd=2.9uM
    BindingDB: Kd=2900nM
    27967 4r4e:B (2.57) BS01 dna ? GO:0003677 ... P37582 25691471 PDBbind: Kd=8.1nM
    27968 4r4e:B (2.57) BS02 dna ? GO:0003677 ... P37582 25691471 PDBbind: Kd=8.1nM
    27969 4r4i:A (1.4) BS01 3HV ? GO:0003677 ... P27694 25699140 PDBbind: -logKd/Ki=6.27, Kd=0.54uM
    BindingDB: Kd=0.540000nM
    27970 4r4j:A (1.51) BS01 3JL N/A GO:0004073 ... N/A 25478842 MOAD: Ki=2.4mM
    27971 4r4j:B (1.51) BS01 3JL N/A GO:0004073 ... N/A 25478842 MOAD: Ki=2.4mM
    27972 4r4o:A (1.33) BS01 3HW ? GO:0003677 ... P27694 25699140 PDBbind: -logKd/Ki=5.82, Kd=1.5uM
    BindingDB: Kd=1.5nM
    27973 4r4q:A (1.35) BS01 3HZ ? GO:0003677 ... P27694 25699140 PDBbind: -logKd/Ki=5.09, Kd=8.2uM
    27974 4r4t:A (1.28) BS01 3J0 ? GO:0003677 ... P27694 25699140 PDBbind: -logKd/Ki=6.26, Kd=0.55uM
    BindingDB: Kd=0.550000nM
    27975 4r51:A (1.81) BS01 PHT N/A GO:0004073 ... N/A 25478842 MOAD: Ki=3.8mM
    27976 4r54:A (1.81) BS02 3JM N/A GO:0004073 ... N/A 25478842 MOAD: Ki=2.2mM
    27977 4r55:A (1.8) BS01 dna ? GO:0003677 ... Q97ZE3 25555709 PDBbind: Kd=1.67uM
    27978 4r55:A (1.8) BS02 dna ? GO:0003677 ... Q97ZE3 25555709 PDBbind: Kd=1.67uM
    27979 4r56:A (2.3) BS01 dna ? GO:0003677 ... Q97ZE3 25555709 PDBbind: Kd=0.134uM
    27980 4r56:A (2.3) BS02 dna ? GO:0003677 ... Q97ZE3 25555709 PDBbind: Kd=0.134uM
    27981 4r56:A (2.3) BS03 dna ? GO:0003677 ... Q97ZE3 25555709 PDBbind: Kd=0.134uM
    27982 4r56:B (2.3) BS01 dna ? GO:0003677 ... Q97ZE3 25555709 PDBbind: Kd=0.134uM
    27983 4r56:B (2.3) BS02 dna ? GO:0003677 ... Q97ZE3 25555709 PDBbind: Kd=0.134uM
    27984 4r57:A (2.079) BS01 ACO 2.3.1.57 GO:0000287 ... Q9KL03 25623305 MOAD: Kd=610uM
    27985 4r57:B (2.079) BS01 ACO 2.3.1.57 GO:0000287 ... Q9KL03 25623305 MOAD: Kd=610uM
    27986 4r57:C (2.079) BS01 ACO 2.3.1.57 GO:0000287 ... Q9KL03 25623305 MOAD: Kd=610uM
    27987 4r57:D (2.079) BS01 ACO 2.3.1.57 GO:0000287 ... Q9KL03 25623305 MOAD: Kd=610uM
    27988 4r57:E (2.079) BS01 ACO 2.3.1.57 GO:0000287 ... Q9KL03 25623305 MOAD: Kd=610uM
    27989 4r57:F (2.079) BS01 ACO 2.3.1.57 GO:0000287 ... Q9KL03 25623305 MOAD: Kd=610uM
    27990 4r57:G (2.079) BS01 ACO 2.3.1.57 GO:0000287 ... Q9KL03 25623305 MOAD: Kd=610uM
    27991 4r57:H (2.079) BS01 ACO 2.3.1.57 GO:0000287 ... Q9KL03 25623305 MOAD: Kd=610uM
    27992 4r57:I (2.079) BS01 ACO 2.3.1.57 GO:0000287 ... Q9KL03 25623305 MOAD: Kd=610uM
    27993 4r57:J (2.079) BS01 ACO 2.3.1.57 GO:0000287 ... Q9KL03 25623305 MOAD: Kd=610uM
    27994 4r57:K (2.079) BS01 ACO 2.3.1.57 GO:0000287 ... Q9KL03 25623305 MOAD: Kd=610uM
    27995 4r57:L (2.079) BS01 ACO 2.3.1.57 GO:0000287 ... Q9KL03 25623305 MOAD: Kd=610uM
    27996 4r59:A (1.65) BS02 3J3 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25254302 MOAD: Ki=11nM
    PDBbind: -logKd/Ki=7.96, Ki=11nM
    27997 4r5a:A (1.64) BS02 3J4 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25254302 MOAD: Ki=2nM
    PDBbind: -logKd/Ki=8.70, Ki=2nM
    27998 4r5b:A (1.5) BS02 3J4 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25254302 MOAD: Ki=185nM
    PDBbind: -logKd/Ki=6.73, Ki=185nM
    27999 4r5g:B (3.4501) BS01 3JE ? GO:0005524 ... P0A6Y8 25148104 PDBbind: -logKd/Ki=5.22, Kd=6.0uM
    28000 4r5h:A (1.8) BS01 3JN N/A GO:0004073 ... N/A 25478842 MOAD: Ki=4.2mM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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