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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    2401 1lv8:D (2.3) BS02 9PP 2.4.2.1 GO:0003824 ... P55859 15342253 MOAD: Kd=3.5uM
    2402 1lv8:E (2.3) BS02 9PP 2.4.2.1 GO:0003824 ... P55859 15342253 MOAD: Kd=3.5uM
    2403 1lv8:F (2.3) BS02 9PP 2.4.2.1 GO:0003824 ... P55859 15342253 MOAD: Kd=3.5uM
    2404 1lvc:A (3.6) BS01 DOT 4.6.1.1 GO:0005576 ... P40136 12485993 PDBbind: -logKd/Ki=6.00, Kd=1uM
    2405 1lvk:A (1.9) BS02 MNT ? GO:0003774 ... P08799 9405148 PDBbind: -logKd/Ki=5.92, Kd=1.2uM
    2406 1lvu:A (2.05) BS02 9PP 2.4.2.1 GO:0003824 ... P55859 15342253 MOAD: Kd=4.8uM
    PDBbind: -logKd/Ki=5.32, Kd=4.8uM
    2407 1lvu:B (2.05) BS02 9PP 2.4.2.1 GO:0003824 ... P55859 15342253 MOAD: Kd=4.8uM
    PDBbind: -logKd/Ki=5.32, Kd=4.8uM
    2408 1lvu:C (2.05) BS02 9PP 2.4.2.1 GO:0003824 ... P55859 15342253 MOAD: Kd=4.8uM
    2409 1lvu:D (2.05) BS02 9PP 2.4.2.1 GO:0003824 ... P55859 15342253 MOAD: Kd=4.8uM
    2410 1lvu:E (2.05) BS02 9PP 2.4.2.1 GO:0003824 ... P55859 15342253 MOAD: Kd=4.8uM
    2411 1lvu:F (2.05) BS02 9PP 2.4.2.1 GO:0003824 ... P55859 15342253 MOAD: Kd=4.8uM
    2412 1lwl:A (2.2) BS02 DSO 1.14.15.1 GO:0004497 ... P00183 12197708 MOAD: Kd~0.02uM
    2413 1lxc:A (2.4) BS02 AYM 1.3.1.9 GO:0004318 ... P0AEK4 12109908 MOAD: ic50=0.37uM
    2414 1lxc:B (2.4) BS02 AYM 1.3.1.9 GO:0004318 ... P0AEK4 12109908 MOAD: ic50=0.37uM
    2415 1lxf:C (-1.00) BS03 BEP ? GO:0005509 ... P63316 12060657 PDBbind: -logKd/Ki=4.10, Kd=80uM
    2416 1ly3:A (1.9) BS02 COG 1.5.1.3 GO:0004146 ... P16184 12198294 MOAD: ic50=87nM
    BindingDB: IC50=87nM
    2417 1ly4:A (2.1) BS02 COQ 1.5.1.3 GO:0004146 ... P16184 12198294 MOAD: ic50=76nM
    BindingDB: IC50=76nM
    2418 1lyx:A (1.9) BS01 PGA 5.3.1.1 GO:0004807 ... Q07412 12403619 MOAD: Ki=0.029mM
    PDBbind: -logKd/Ki=4.54, Ki=0.029mM
    2419 1lzo:B (2.8) BS01 PGA 5.3.1.1 GO:0004807 ... Q07412 12403619 PDBbind: -logKd/Ki=4.54, Ki=0.029mM
    2420 1lzq:A (2.2) BS01 0ZQ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 12699382 MOAD: Ki=4.1nM
    PDBbind: -logKd/Ki=8.39, Ki=4.1nM
    2421 1lzq:B (2.2) BS01 0ZQ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 12699382 PDBbind: -logKd/Ki=8.39, Ki=4.1nM
    2422 1m01:A (2.1) BS01 NAG 3.2.1.52 GO:0004553 ... O85361 12171933 MOAD: Kd=3mM
    2423 1m0b:A (2.45) BS01 0ZQ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 15560786 PDBbind: -logKd/Ki=8.82, Ki=1.53nM
    2424 1m0b:B (2.45) BS01 0ZQ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 15560786 MOAD: Ki=1.53nM
    PDBbind: -logKd/Ki=8.82, Ki=1.53nM
    2425 1m0n:A (2.2) BS01 HCP 4.1.1.64 GO:0008453 ... P16932 12369820 MOAD: Ki=6mM
    PDBbind: -logKd/Ki=2.22, Ki=6.0mM
    2426 1m0o:A (2.4) BS01 MPM 4.1.1.64 GO:0008453 ... P16932 12369820 MOAD: Ki=4.9mM
    PDBbind: -logKd/Ki=2.31, Ki=4.9mM
    2427 1m0q:A (2.0) BS01 EPC 4.1.1.64 GO:0008453 ... P16932 12369820 MOAD: Ki=1.1mM
    PDBbind: -logKd/Ki=3.89, Ki=0.13mM
    2428 1m13:A (2.15) BS01 HYF ? GO:0003677 ... O75469 12578355 MOAD: Kd=27nM
    PDBbind: -logKd/Ki=7.57, Kd=27nM
    2429 1m17:A (2.6) BS01 AQ4 2.7.10.1 GO:0004672 ... P00533 12196540 BindingDB: IC50=30nM, Ki=0.100000nM, Kd=0.520000nM
    2430 1m18:A (2.45) BS01 dna ? GO:0000786 ... P02302 12559907 PDBbind: Kd=0.6uM
    2431 1m18:A (2.45) BS02 dna ? GO:0000786 ... P02302 12559907 PDBbind: Kd=0.6uM
    2432 1m18:B (2.45) BS01 dna ? GO:0000786 ... P62799 12559907 PDBbind: Kd=0.6uM
    2433 1m18:B (2.45) BS02 dna ? GO:0000786 ... P62799 12559907 PDBbind: Kd=0.6uM
    2434 1m18:C (2.45) BS01 dna ? GO:0000786 ... P06897 12559907 PDBbind: Kd=0.6uM
    2435 1m18:C (2.45) BS02 dna ? GO:0000786 ... P06897 12559907 PDBbind: Kd=0.6uM
    2436 1m18:D (2.45) BS01 dna ? GO:0000786 ... P02281 12559907 PDBbind: Kd=0.6uM
    2437 1m18:D (2.45) BS02 dna ? GO:0000786 ... P02281 12559907 PDBbind: Kd=0.6uM
    2438 1m18:E (2.45) BS01 dna ? GO:0000786 ... P02302 12559907 PDBbind: Kd=0.6uM
    2439 1m18:E (2.45) BS02 dna ? GO:0000786 ... P02302 12559907 PDBbind: Kd=0.6uM
    2440 1m18:F (2.45) BS01 dna ? GO:0000786 ... P62799 12559907 PDBbind: Kd=0.6uM
    2441 1m18:F (2.45) BS02 dna ? GO:0000786 ... P62799 12559907 PDBbind: Kd=0.6uM
    2442 1m18:G (2.45) BS01 dna ? GO:0000786 ... P06897 12559907 PDBbind: Kd=0.6uM
    2443 1m18:G (2.45) BS02 dna ? GO:0000786 ... P06897 12559907 PDBbind: Kd=0.6uM
    2444 1m18:H (2.45) BS01 dna ? GO:0000786 ... P02281 12559907 PDBbind: Kd=0.6uM
    2445 1m18:H (2.45) BS02 dna ? GO:0000786 ... P02281 12559907 PDBbind: Kd=0.6uM
    2446 1m19:A (2.3) BS01 dna ? GO:0000786 ... P02302 12559907 PDBbind: Kd=0.6uM
    2447 1m19:A (2.3) BS02 dna ? GO:0000786 ... P02302 12559907 PDBbind: Kd=0.6uM
    2448 1m19:B (2.3) BS01 dna ? GO:0000786 ... P62799 12559907 PDBbind: Kd=0.6uM
    2449 1m19:B (2.3) BS02 dna ? GO:0000786 ... P62799 12559907 PDBbind: Kd=0.6uM
    2450 1m19:C (2.3) BS01 dna ? GO:0000786 ... P06897 12559907 PDBbind: Kd=0.6uM
    2451 1m19:C (2.3) BS02 dna ? GO:0000786 ... P06897 12559907 PDBbind: Kd=0.6uM
    2452 1m19:D (2.3) BS01 dna ? GO:0000786 ... P02281 12559907 PDBbind: Kd=0.6uM
    2453 1m19:D (2.3) BS02 dna ? GO:0000786 ... P02281 12559907 PDBbind: Kd=0.6uM
    2454 1m19:E (2.3) BS01 dna ? GO:0000786 ... P02302 12559907 PDBbind: Kd=0.6uM
    2455 1m19:E (2.3) BS02 dna ? GO:0000786 ... P02302 12559907 PDBbind: Kd=0.6uM
    2456 1m19:F (2.3) BS01 dna ? GO:0000786 ... P62799 12559907 PDBbind: Kd=0.6uM
    2457 1m19:F (2.3) BS02 dna ? GO:0000786 ... P62799 12559907 PDBbind: Kd=0.6uM
    2458 1m19:G (2.3) BS01 dna ? GO:0000786 ... P06897 12559907 PDBbind: Kd=0.6uM
    2459 1m19:G (2.3) BS02 dna ? GO:0000786 ... P06897 12559907 PDBbind: Kd=0.6uM
    2460 1m19:H (2.3) BS01 dna ? GO:0000786 ... P02281 12559907 PDBbind: Kd=0.6uM
    2461 1m19:H (2.3) BS02 dna ? GO:0000786 ... P02281 12559907 PDBbind: Kd=0.6uM
    2462 1m1a:A (2.65) BS01 dna ? GO:0000786 ... P02302 12559907 PDBbind: Kd=0.6uM
    2463 1m1a:A (2.65) BS02 dna ? GO:0000786 ... P02302 12559907 PDBbind: Kd=0.6uM
    2464 1m1a:B (2.65) BS01 dna ? GO:0000786 ... P62799 12559907 PDBbind: Kd=0.6uM
    2465 1m1a:B (2.65) BS02 dna ? GO:0000786 ... P62799 12559907 PDBbind: Kd=0.6uM
    2466 1m1a:C (2.65) BS01 dna ? GO:0000786 ... P06897 12559907 PDBbind: Kd=0.6uM
    2467 1m1a:C (2.65) BS02 dna ? GO:0000786 ... P06897 12559907 PDBbind: Kd=0.6uM
    2468 1m1a:D (2.65) BS01 dna ? GO:0000786 ... P02281 12559907 PDBbind: Kd=0.6uM
    2469 1m1a:D (2.65) BS02 dna ? GO:0000786 ... P02281 12559907 PDBbind: Kd=0.6uM
    2470 1m1a:E (2.65) BS01 dna ? GO:0000786 ... P02302 12559907 PDBbind: Kd=0.6uM
    2471 1m1a:E (2.65) BS02 dna ? GO:0000786 ... P02302 12559907 PDBbind: Kd=0.6uM
    2472 1m1a:F (2.65) BS01 dna ? GO:0000786 ... P62799 12559907 PDBbind: Kd=0.6uM
    2473 1m1a:F (2.65) BS02 dna ? GO:0000786 ... P62799 12559907 PDBbind: Kd=0.6uM
    2474 1m1a:G (2.65) BS01 dna ? GO:0000786 ... P06897 12559907 PDBbind: Kd=0.6uM
    2475 1m1a:G (2.65) BS02 dna ? GO:0000786 ... P06897 12559907 PDBbind: Kd=0.6uM
    2476 1m1a:H (2.65) BS01 dna ? GO:0000786 ... P02281 12559907 PDBbind: Kd=0.6uM
    2477 1m1a:H (2.65) BS02 dna ? GO:0000786 ... P02281 12559907 PDBbind: Kd=0.6uM
    2478 1m1b:A (2.25) BS02 SPV 5.4.2.9 GO:0003824 ... P56839 12162742 MOAD: Ki=22uM
    PDBbind: -logKd/Ki=4.66, Ki=22uM
    2479 1m1b:B (2.25) BS01 SPV 5.4.2.9 GO:0003824 ... P56839 12162742 MOAD: Ki=22uM
    2480 1m2p:A (2.0) BS01 HNA 2.7.11.1 GO:0004672 ... P28523 12419810 PDBbind: -logKd/Ki=6.11, Ki=0.78uM
    BindingDB: Ki=780nM
    2481 1m2q:A (1.79) BS01 MNX 2.7.11.1 GO:0004672 ... P28523 12419810 PDBbind: -logKd/Ki=6.10, Ki=0.80uM
    BindingDB: Ki=800nM
    2482 1m2r:A (1.7) BS01 MNY 2.7.11.1 GO:0004672 ... P28523 12419810 PDBbind: -logKd/Ki=6.46, Ki=0.35uM
    BindingDB: Ki=350nM
    2483 1m2x:A (1.5) BS04 MCO 3.5.2.6 GO:0008270 ... O08498 12684522 MOAD: Ki~85uM
    PDBbind: -logKd/Ki=4.15, Ki=70uM
    2484 1m2x:B (1.5) BS04 MCO 3.5.2.6 GO:0008270 ... O08498 12684522 MOAD: Ki~85uM
    2485 1m2x:C (1.5) BS04 MCO 3.5.2.6 GO:0008270 ... O08498 12684522 MOAD: Ki~85uM
    2486 1m2x:D (1.5) BS04 MCO 3.5.2.6 GO:0008270 ... O08498 12684522 MOAD: Ki~85uM
    2487 1m2z:A (2.5) BS02 DEX ? N/A P04150 12151000 BindingDB: EC50=2.5nM, Ki=1.2nM, IC50=5nM, Kd=19nM
    2488 1m2z:D (2.5) BS02 DEX ? N/A P04150 12151000 BindingDB: EC50=2.5nM, Ki=1.2nM, IC50=5nM, Kd=19nM
    2489 1m48:A (1.95) BS01 FRG ? GO:0002250 ... P60568 12582206 MOAD: Kd=8.2uM
    PDBbind: -logKd/Ki=5.09, Kd=8.2uM
    2490 1m48:B (1.95) BS01 FRG ? GO:0002250 ... P60568 12582206 MOAD: Kd=8.2uM
    2491 1m51:A (2.25) BS02 TSX 2.7.11.-
    4.1.1.32    		 GO:0000287 ... P35558 14552798 MOAD: ic50=18.8uM
    PDBbind: -logKd/Ki=4.73, IC50=18.8uM
    2492 1m5b:A (1.85) BS02 BN1 ? GO:0015276 ... P19491 12215417 MOAD: ic50=9.7nM
    2493 1m5b:B (1.85) BS03 BN1 ? GO:0015276 ... P19491 12215417 MOAD: ic50=9.7nM
    2494 1m5b:C (1.85) BS02 BN1 ? GO:0015276 ... P19491 12215417 MOAD: ic50=9.7nM
    2495 1m5c:A (1.65) BS01 BRH ? GO:0015276 ... P19491 12215417 MOAD: ic50=0.5uM
    PDBbind: -logKd/Ki=6.30, IC50=0.5uM
    2496 1m5d:A (1.73) BS01 BRH ? GO:0015276 ... P19491 12215417 MOAD: ic50=9.2uM
    PDBbind: -logKd/Ki=5.04, IC50=9.2uM
    2497 1m5e:A (1.46) BS02 AM1 ? GO:0015276 ... P19491 12215417 MOAD: ic50=20.1nM
    2498 1m5e:B (1.46) BS03 AM1 ? GO:0015276 ... P19491 12215417 MOAD: ic50=20.1nM
    2499 1m5e:C (1.46) BS02 AM1 ? GO:0015276 ... P19491 12215417 MOAD: ic50=20.1nM
    2500 1m5f:A (1.95) BS01 AM1 ? GO:0015276 ... P19491 12215417 MOAD: ic50=14.8nM
    2501 1m5f:B (1.95) BS03 AM1 ? GO:0015276 ... P19491 12215417 MOAD: ic50=14.8nM
    2502 1m5f:C (1.95) BS02 AM1 ? GO:0015276 ... P19491 12215417 MOAD: ic50=14.8nM
    2503 1m5w:A (1.96) BS01 DXP 2.6.99.2 GO:0005737 ... P0A794 12269807 MOAD: Kd=54uM
    PDBbind: -logKd/Ki=4.27, Kd=54uM
    2504 1m5w:B (1.96) BS01 DXP 2.6.99.2 GO:0005737 ... P0A794 12269807 MOAD: Kd=54uM
    2505 1m5w:C (1.96) BS01 DXP 2.6.99.2 GO:0005737 ... P0A794 12269807 MOAD: Kd=54uM
    2506 1m5w:E (1.96) BS01 DXP 2.6.99.2 GO:0005737 ... P0A794 12269807 MOAD: Kd=54uM
    PDBbind: -logKd/Ki=4.27, Kd=54uM
    2507 1m5w:F (1.96) BS01 DXP 2.6.99.2 GO:0005737 ... P0A794 12269807 MOAD: Kd=54uM
    2508 1m5w:G (1.96) BS01 DXP 2.6.99.2 GO:0005737 ... P0A794 12269807 MOAD: Kd=54uM
    2509 1m6p:A (1.8) BS02 M6P ? GO:0005768 ... P11456 9604938 MOAD: Kd=8uM
    PDBbind: -logKd/Ki=5.10, Kd=8uM
    2510 1m6p:B (1.8) BS01 M6P ? GO:0005768 ... P11456 9604938 MOAD: Kd=8uM
    2511 1m74:A (3.0) BS01 ADP 7.4.2.8 GO:0005524 ... P28366 12242434 PDBbind: -logKd/Ki=7.00, Kd=100nM
    2512 1m78:A (1.71) BS02 CLZ 1.5.1.3 GO:0004146 ... P22906 9374515 MOAD: ic50=52nM
    2513 1m78:B (1.71) BS02 CLZ 1.5.1.3 GO:0004146 ... P22906 9374515 MOAD: ic50=52nM
    2514 1m79:A (1.7) BS02 MQ1 1.5.1.3 GO:0004146 ... P22906 9374515 MOAD: ic50=320nM
    2515 1m79:B (1.7) BS02 MQ1 1.5.1.3 GO:0004146 ... P22906 9374515 MOAD: ic50=320nM
    2516 1m7a:A (1.76) BS02 MQU 1.5.1.3 GO:0004146 ... P22906 9374515 MOAD: ic50=9nM
    2517 1m7a:B (1.76) BS02 MQU 1.5.1.3 GO:0004146 ... P22906 9374515 MOAD: ic50=9nM
    2518 1m7d:A (2.3) BS01 MAG ? GO:0046872 ... A2NHM3 12427018 PDBbind: -logKd/Ki=6.23, Kd=0.59uM
    2519 1m7d:B (2.3) BS01 RAE ? GO:0002250 ... P01801 12427018 PDBbind: -logKd/Ki=6.23, Kd=0.59uM
    2520 1m7i:B (2.5) BS01 RAM ? GO:0002250 ... P01801 12427018 PDBbind: -logKd/Ki=5.40, Kd=4.0uM
    2521 1m7q:A (2.4) BS01 DQO 2.7.11.24 GO:0000077 ... Q16539 12482439 MOAD: ic50=2.6nM
    PDBbind: -logKd/Ki=8.59, IC50=2.6nM
    BindingDB: IC50=2.6nM
    2522 1m7y:A (1.6) BS01 PPG 1.4.-.-
    4.4.1.14    		 GO:0003824 ... P37821 12228256 PDBbind: -logKd/Ki=10.96, Kd=0.011nM
    2523 1m83:A (2.2) BS01 ATP 6.1.1.2 GO:0000166 ... P00953 12473451 MOAD: Kd=0.4mM
    PDBbind: -logKd/Ki=3.40, Kd=0.4mM
    2524 1m8d:A (2.35) BS03 CLW 1.14.13.39 GO:0004517 ... P29477 12437348 MOAD: Kd~4.3uM
    2525 1m8d:B (2.35) BS03 CLW 1.14.13.39 GO:0004517 ... P29477 12437348 MOAD: Kd~4.3uM
    2526 1m8e:A (2.9) BS03 7NI 1.14.13.39 GO:0004517 ... P29477 12437348 BindingDB: IC50=20000nM
    2527 1m8e:B (2.9) BS03 7NI 1.14.13.39 GO:0004517 ... P29477 12437348 BindingDB: IC50=20000nM
    2528 1m8h:A (2.85) BS03 6NI 1.14.13.39 GO:0004517 ... P29477 12437348 BindingDB: IC50=20000nM
    2529 1m8h:B (2.85) BS03 6NI 1.14.13.39 GO:0004517 ... P29477 12437348 BindingDB: IC50=20000nM
    2530 1m8w:A (2.2) BS01 rna ? GO:0003723 ... Q14671 12202039 PDBbind: Kd=500nM
    2531 1m8w:A (2.2) BS02 rna ? GO:0003723 ... Q14671 12202039 PDBbind: Kd=500nM
    2532 1m8w:B (2.2) BS01 rna ? GO:0003723 ... Q14671 12202039 PDBbind: Kd=500nM
    2533 1m8w:B (2.2) BS02 rna ? GO:0003723 ... Q14671 12202039 PDBbind: Kd=500nM
    2534 1m8x:A (2.2) BS01 rna ? GO:0003723 ... Q14671 12202039 PDBbind: Kd=500nM
    2535 1m8x:B (2.2) BS01 rna ? GO:0003723 ... Q14671 12202039 PDBbind: Kd=500nM
    2536 1m8y:A (2.6) BS01 rna ? GO:0003723 ... Q14671 12202039 PDBbind: Kd=160nM
    2537 1m8y:B (2.6) BS01 rna ? GO:0003723 ... Q14671 12202039 PDBbind: Kd=160nM
    2538 1m9j:A (2.43) BS03 CLW 1.14.13.39 GO:0004517 ... P29474 12437348 MOAD: Kd~0.6uM
    BindingDB: IC50=8700nM
    2539 1m9j:B (2.43) BS03 CLW 1.14.13.39 GO:0004517 ... P29474 12437348 MOAD: Kd~0.6uM
    BindingDB: IC50=8700nM
    2540 1m9k:A (2.01) BS03 7NI 1.14.13.39 GO:0004517 ... P29474 12437348 MOAD: Kd~250uM
    BindingDB: IC50=2500nM
    2541 1m9k:B (2.01) BS03 7NI 1.14.13.39 GO:0004517 ... P29474 12437348 MOAD: Kd~250uM
    BindingDB: IC50=2500nM
    2542 1m9n:A (1.93) BS02 XMP 2.1.2.3
    3.5.4.10    		 GO:0003824 ... P31335 12501179 MOAD: Ki=0.12uM
    PDBbind: -logKd/Ki=6.92, Ki=0.12uM
    2543 1m9n:B (1.93) BS03 XMP 2.1.2.3
    3.5.4.10    		 GO:0003824 ... P31335 12501179 MOAD: Ki=0.12uM
    PDBbind: -logKd/Ki=6.92, Ki=0.12uM
    2544 1m9t:A (2.4) BS03 INE 1.14.13.39 GO:0004517 ... P29477 12437348 BindingDB: IC50=2200nM
    2545 1m9t:B (2.4) BS03 INE 1.14.13.39 GO:0004517 ... P29477 12437348 BindingDB: IC50=2200nM
    2546 1ma7:A (2.3) BS01 dna ? GO:0003677 ... P06956 12779336 PDBbind: Kd=146nM
    2547 1ma7:A (2.3) BS02 dna ? GO:0003677 ... P06956 12779336 PDBbind: Kd=146nM
    2548 1ma7:B (2.3) BS01 dna ? GO:0003677 ... P06956 12779336 PDBbind: Kd=146nM
    2549 1ma7:B (2.3) BS02 dna ? GO:0003677 ... P06956 12779336 PDBbind: Kd=146nM
    2550 1maa:A (2.9) BS01 DME 3.1.1.7 GO:0001919 ... P21836 9915834 BindingDB: Ki=460nM
    2551 1maa:B (2.9) BS01 DME 3.1.1.7 GO:0001919 ... P21836 9915834 BindingDB: Ki=460nM
    2552 1maa:C (2.9) BS01 DME 3.1.1.7 GO:0001919 ... P21836 9915834 BindingDB: Ki=460nM
    2553 1maa:D (2.9) BS01 DME 3.1.1.7 GO:0001919 ... P21836 9915834 BindingDB: Ki=460nM
    2554 1mai:A (1.9) BS01 I3P 3.1.4.11 GO:0035556 ... P10688 8521504 MOAD: Kd=210nM
    PDBbind: -logKd/Ki=6.68, Kd=210nM
    2555 1mau:A (2.15) BS01 ATP 6.1.1.2 GO:0000166 ... P00953 12473451 PDBbind: -logKd/Ki=11.30, Kd=5pM
    2556 1maw:A (3.0) BS01 ATP 6.1.1.2 GO:0000166 ... P00953 12473451 PDBbind: -logKd/Ki=1.10, Kd=80mM
    2557 1mcz:A (2.8) BS04 RMN 4.1.1.7 GO:0000287 ... P20906 12590569 PDBbind: -logKd/Ki=3.00, Ki=1mM
    2558 1mcz:A (2.8) BS06 RMN 4.1.1.7 GO:0000287 ... P20906 12590569 PDBbind: -logKd/Ki=3.00, Ki=1mM
    2559 1mcz:B (2.8) BS03 RMN 4.1.1.7 GO:0000287 ... P20906 12590569 PDBbind: -logKd/Ki=3.00, Ki=1mM
    2560 1mcz:B (2.8) BS06 RMN 4.1.1.7 GO:0000287 ... P20906 12590569 PDBbind: -logKd/Ki=3.00, Ki=1mM
    2561 1md2:D (1.45) BS01 233 ? GO:0005515 ... P01556 12405825 MOAD: Kd~40nM
    2562 1mdl:A (1.85) BS02 RMN 5.1.2.2 GO:0000287 ... P11444 7893690 PDBbind: -logKd/Ki=3.09, Ki=810uM
    BindingDB: Ki=810000nM
    2563 1mdl:A (1.85) BS03 SMN 5.1.2.2 GO:0000287 ... P11444 7893690 BindingDB: Ki=570000nM
    2564 1mdm:A (2.8) BS01 dna ? GO:0003677 ... Q02548 12221090 PDBbind: Kd=35pM
    2565 1mdm:A (2.8) BS02 dna ? GO:0003677 ... Q02548 12221090 PDBbind: Kd=35pM
    2566 1mdm:B (2.8) BS01 dna ? GO:0003700 ... P27577 12221090 PDBbind: Kd=35pM
    2567 1mdm:B (2.8) BS02 dna ? GO:0003700 ... P27577 12221090 PDBbind: Kd=35pM
    2568 1me3:A (1.2) BS01 P10 3.4.22.51 GO:0006508 ... P25779 12467703 PDBbind: -logKd/Ki=7.19, Ki=64.6nM
    2569 1me4:A (1.2) BS01 T10 3.4.22.51 GO:0006508 ... P25779 12467703 PDBbind: -logKd/Ki=6.84, Ki=146nM
    2570 1me7:A (2.15) BS01 RVP 1.1.1.205 GO:0000166 ... P50097 12235158 MOAD: Ki=65nM
    PDBbind: -logKd/Ki=7.19, Ki=65nM
    2571 1me8:A (1.9) BS01 RVP 1.1.1.205 GO:0000166 ... P50097 12235158 MOAD: Ki=65nM
    PDBbind: -logKd/Ki=7.19, Ki=65nM
    2572 1mem:A (1.8) BS01 0D6 3.4.22.38 GO:0006508 ... P43235 9033587 PDBbind: -logKd/Ki=7.94, Ki=11.5nM
    2573 1mep:A (1.65) BS01 BTN ? GO:0009374 ... P22629 16452627 BindingDB: Kd=1.000000nM
    2574 1mep:B (1.65) BS01 BTN ? GO:0009374 ... P22629 16452627 BindingDB: Kd=1.000000nM
    2575 1mep:C (1.65) BS01 BTN ? GO:0009374 ... P22629 16452627 BindingDB: Kd=1.000000nM
    2576 1mep:D (1.65) BS01 BTN ? GO:0009374 ... P22629 16452627 BindingDB: Kd=1.000000nM
    2577 1mer:A (1.9) BS01 DMQ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 9048541 MOAD: Ki=10nM
    2578 1mes:A (1.9) BS01 DMP 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 9048541 PDBbind: -logKd/Ki=7.70, Ki=20nM
    2579 1mes:B (1.9) BS01 DMP 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 9048541 MOAD: Ki=20nM
    PDBbind: -logKd/Ki=7.70, Ki=20nM
    2580 1met:A (1.9) BS01 DMP 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 9048541 MOAD: Ki=0.4nM
    PDBbind: -logKd/Ki=9.40, Ki=0.4nM
    2581 1met:B (1.9) BS01 DMP 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 9048541 PDBbind: -logKd/Ki=9.40, Ki=0.4nM
    2582 1meu:A (1.9) BS01 DMP 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 9048541 MOAD: Ki=0.8uM
    PDBbind: -logKd/Ki=6.10, Ki=0.8uM
    2583 1meu:B (1.9) BS01 DMP 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 9048541 PDBbind: -logKd/Ki=6.10, Ki=0.8uM
    2584 1mfa:L (1.7) BS01 ABE N/A N/A N/A 7517550 PDBbind: -logKd/Ki=5.04, Kd=9.1uM
    2585 1mfd:H (2.1) BS01 MMA N/A N/A N/A 8172893 PDBbind: -logKd/Ki=5.31, Kd=4.9uM
    2586 1mfd:H (2.1) BS02 ABE N/A N/A N/A 8172893 PDBbind: -logKd/Ki=5.31, Kd=4.9uM
    2587 1mfd:L (2.1) BS01 ABE N/A N/A N/A 8172893 PDBbind: -logKd/Ki=5.31, Kd=4.9uM
    2588 1mfi:A (1.8) BS01 FHC 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P34884 10360941 MOAD: Ki=2.6uM
    PDBbind: -logKd/Ki=5.59, Ki=2.6uM
    2589 1mfi:A (1.8) BS02 FHC 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P34884 10360941 MOAD: Ki=2.6uM
    PDBbind: -logKd/Ki=5.59, Ki=2.6uM
    2590 1mfi:B (1.8) BS01 FHC 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P34884 10360941 MOAD: Ki=2.6uM
    PDBbind: -logKd/Ki=5.59, Ki=2.6uM
    2591 1mfi:B (1.8) BS02 FHC 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P34884 10360941 MOAD: Ki=2.6uM
    PDBbind: -logKd/Ki=5.59, Ki=2.6uM
    2592 1mfi:C (1.8) BS01 FHC 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P34884 10360941 MOAD: Ki=2.6uM
    2593 1mfi:C (1.8) BS02 FHC 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P34884 10360941 MOAD: Ki=2.6uM
    2594 1mfp:A (2.33) BS02 IDN 1.3.1.9 GO:0004318 ... P0AEK4 12699381 MOAD: ic50=0.07uM
    BindingDB: IC50=70nM
    2595 1mfp:B (2.33) BS02 IDN 1.3.1.9 GO:0004318 ... P0AEK4 12699381 MOAD: ic50=0.07uM
    BindingDB: IC50=70nM
    2596 1mgo:B (1.2) BS04 PFB 1.1.1.1 GO:0004022 ... P00327 12501206 MOAD: Ki=51uM
    2597 1mgo:B (1.2) BS05 PFB 1.1.1.1 GO:0004022 ... P00327 12501206 MOAD: Ki=51uM
    2598 1mh5:A (2.1) BS01 HAL ? GO:0005576 ... P01837 12948492 PDBbind: -logKd/Ki=9.21, Kd=0.61nM
    2599 1mh5:B (2.1) BS01 HAL ? N/A P01863 12948492 MOAD: Kd=0.61nM
    PDBbind: -logKd/Ki=9.21, Kd=0.61nM
    2600 1mh5:H (2.1) BS01 HAL ? N/A P01863 12948492 MOAD: Kd=0.61nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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