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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    24201 4i4i:B (2.4948) BS02 PEP 2.7.1.11 GO:0003872 ... P00512 23859543 MOAD: Kd=2.1uM
    24202 4i4i:C (2.4948) BS01 PEP 2.7.1.11 GO:0003872 ... P00512 23859543 MOAD: Kd=2.1uM
    24203 4i4i:C (2.4948) BS02 PEP 2.7.1.11 GO:0003872 ... P00512 23859543 MOAD: Kd=2.1uM
    24204 4i4i:D (2.4948) BS01 PEP 2.7.1.11 GO:0003872 ... P00512 23859543 MOAD: Kd=2.1uM
    24205 4i4i:D (2.4948) BS02 PEP 2.7.1.11 GO:0003872 ... P00512 23859543 MOAD: Kd=2.1uM
    24206 4i51:A (1.9) BS02 SAH 2.1.1.-
    2.1.1.367    		 GO:0002039 ... Q9H9B1 24082136 BindingDB: IC50=230nM
    24207 4i51:B (1.9) BS02 SAH 2.1.1.-
    2.1.1.367    		 GO:0002039 ... Q9H9B1 24082136 BindingDB: IC50=230nM
    24208 4i53:A (2.5002) BS01 1C1 ? GO:0019031 ... C6G099 23667716 MOAD: Kd=110nM
    24209 4i53:B (2.5002) BS01 1C1 ? GO:0019031 ... C6G099 23667716 MOAD: Kd=110nM
    24210 4i54:A (2.5) BS01 1C1 ? GO:0019031 ... Q0ED31 23667716 MOAD: Kd=110nM
    PDBbind: -logKd/Ki=6.96, Kd=0.11uM
    24211 4i54:B (2.5) BS01 1C1 ? GO:0019031 ... Q0ED31 23667716 MOAD: Kd=110nM
    24212 4i5c:A (2.1) BS01 C5I 2.7.10.2 GO:0004672 ... P23458 23642482 MOAD: Ki=1.5nM
    PDBbind: -logKd/Ki=8.82, Ki=1.5nM
    BindingDB: Ki=1.5nM, EC50=114nM
    24213 4i5c:B (2.1) BS01 C5I 2.7.10.2 GO:0004672 ... P23458 23642482 MOAD: Ki=1.5nM
    BindingDB: Ki=1.5nM, EC50=114nM
    24214 4i5h:A (1.9) BS01 G17 2.7.11.24 GO:0000165 ... P63086 23790491 MOAD: Ki<2nM
    PDBbind: -logKd/Ki=8.70, Ki<2nM
    24215 4i5i:A (2.5) BS01 4I5 2.3.1.-
    2.3.1.286    		 GO:0070403 ... Q96EB6 23311358 BindingDB: IC50=652nM
    24216 4i5i:B (2.5) BS01 4I5 2.3.1.-
    2.3.1.286    		 GO:0070403 ... Q96EB6 23311358 BindingDB: IC50=652nM
    24217 4i5m:A (1.801) BS01 R78 2.7.11.21 GO:0004672 ... Q9NYY3 23794260 MOAD: ic50=0.0088uM
    PDBbind: -logKd/Ki=8.06, IC50=8.8nM
    BindingDB: IC50=14nM, Ki=<1nM, Kd=0.810000nM
    24218 4i5p:A (1.738) BS01 1D1 2.7.11.21 GO:0004672 ... Q9NYY3 23794260 MOAD: ic50=0.377uM
    PDBbind: -logKd/Ki=6.42, IC50=0.377uM
    24219 4i5x:A (2.1) BS01 FLF 1.1.1.300
    1.1.1.54    		 GO:0001523 ... O60218 24100137 MOAD: ic50=0.76uM
    BindingDB: IC50=760nM
    24220 4i60:A (2.5) BS01 B1R ? GO:0005576 ... P02701 23603015 MOAD: Kd=1.87uM
    PDBbind: -logKd/Ki=5.73, Kd=1.87uM
    24221 4i6b:A (1.8) BS01 11G 2.7.11.21 GO:0004672 ... Q9NYY3 23794260 MOAD: ic50=1.17uM
    PDBbind: -logKd/Ki=5.93, IC50=1.17uM
    24222 4i6f:A (2.9) BS01 1C7 2.7.11.21 GO:0004672 ... Q9NYY3 23794260 PDBbind: -logKd/Ki=8.30, IC50=5nM
    BindingDB: IC50=5.0nM
    24223 4i6g:A (2.2) BS01 FAD ? N/A Q9R194 23503662 MOAD: Kd=40uM
    24224 4i6g:B (2.2) BS01 FAD ? N/A Q9R194 23503662 MOAD: Kd=40uM
    24225 4i6h:A (1.91) BS01 1C8 2.7.11.21 GO:0004672 ... Q9NYY3 23794260 MOAD: ic50=0.005uM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    24226 4i6q:A (1.85) BS02 1DT 2.7.10.2 GO:0004672 ... P52333 23541670 MOAD: ic50=0.03uM
    PDBbind: -logKd/Ki=7.52, IC50=0.03uM
    BindingDB: IC50=30nM
    24227 4i71:A (1.28) BS01 AGV 3.2.2.1 GO:0005829 ... Q57ZL6 23897478 MOAD: Ki=18nM
    PDBbind: -logKd/Ki=7.74, Ki=18nM
    24228 4i72:A (2.05) BS02 UA2 3.2.2.1 GO:0005829 ... Q57ZL6 23897478 MOAD: Ki=0.9nM
    PDBbind: -logKd/Ki=9.05, Ki=0.9nM
    24229 4i72:B (2.05) BS02 UA2 3.2.2.1 GO:0005829 ... Q57ZL6 23897478 MOAD: Ki=0.9nM
    24230 4i73:A (2.18) BS02 MBY 3.2.2.1 GO:0005829 ... Q57ZL6 23897478 MOAD: Ki=190nM
    PDBbind: -logKd/Ki=6.72, Ki=190nM
    24231 4i73:B (2.18) BS02 MBY 3.2.2.1 GO:0005829 ... Q57ZL6 23897478 MOAD: Ki=190nM
    24232 4i73:C (2.18) BS02 MBY 3.2.2.1 GO:0005829 ... Q57ZL6 23897478 MOAD: Ki=190nM
    24233 4i73:D (2.18) BS02 MBY 3.2.2.1 GO:0005829 ... Q57ZL6 23897478 MOAD: Ki=190nM
    24234 4i74:A (1.68) BS02 MBY 3.2.2.1 GO:0005829 ... Q57ZL6 23897478 PDBbind: -logKd/Ki=6.72, Ki=190nM
    24235 4i7e:A (2.0) BS01 PEP 2.7.1.11 GO:0003872 ... P00512 23859543 MOAD: Kd=0.45uM
    24236 4i7e:A (2.0) BS02 PEP 2.7.1.11 GO:0003872 ... P00512 23859543 MOAD: Kd=0.45uM
    24237 4i7e:B (2.0) BS01 PEP 2.7.1.11 GO:0003872 ... P00512 23859543 MOAD: Kd=0.45uM
    24238 4i7e:B (2.0) BS02 PEP 2.7.1.11 GO:0003872 ... P00512 23859543 MOAD: Kd=0.45uM
    24239 4i7e:C (2.0) BS01 PEP 2.7.1.11 GO:0003872 ... P00512 23859543 MOAD: Kd=0.45uM
    24240 4i7e:C (2.0) BS02 PEP 2.7.1.11 GO:0003872 ... P00512 23859543 MOAD: Kd=0.45uM
    24241 4i7e:D (2.0) BS01 PEP 2.7.1.11 GO:0003872 ... P00512 23859543 MOAD: Kd=0.45uM
    24242 4i7e:D (2.0) BS02 PEP 2.7.1.11 GO:0003872 ... P00512 23859543 MOAD: Kd=0.45uM
    24243 4i7f:A (2.5) BS01 NVE 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 23375792 MOAD: ic50=100nM
    PDBbind: -logKd/Ki=7.00, IC50=100nM
    24244 4i7m:A (1.48) BS01 2LP 3.2.1.17 GO:0003796 ... P00720 23473072 MOAD: Ka=13900M^-1
    PDBbind: -logKd/Ki=4.14, Kd=72uM
    24245 4i7m:B (1.48) BS01 2LP 3.2.1.17 GO:0003796 ... P00720 23473072 MOAD: Ka=13900M^-1
    24246 4i7p:A (1.6) BS01 ES3 3.2.1.17 GO:0003796 ... P00720 23473072 MOAD: Ka=3155M^-1
    PDBbind: -logKd/Ki=3.50, Kd=317uM
    BindingDB: Kd=317000nM
    24247 4i7p:B (1.6) BS01 ES3 3.2.1.17 GO:0003796 ... P00720 23473072 MOAD: Ka=3155M^-1
    BindingDB: Kd=317000nM
    24248 4i7y:H (2.4) BS02 dna 3.4.21.5 GO:0004252 ... P00734 24311581 PDBbind: Kd=0.7nM
    24249 4i89:A (1.69) BS01 1FL ? GO:0005179 ... P02766 23792159 BindingDB: IC50=12000nM, Kd=407nM, EC50=5600nM
    24250 4i89:B (1.69) BS01 1FL ? GO:0005179 ... P02766 23792159 BindingDB: IC50=12000nM, Kd=407nM, EC50=5600nM
    24251 4i8n:A (2.5) BS01 1CG 3.1.3.48 GO:0004725 ... P18031 23964742 PDBbind: -logKd/Ki=4.46, Ki=35uM
    24252 4i8v:A (2.6) BS02 BHF 1.14.14.1
    4.2.1.152    		 GO:0001666 ... P04798 23508959 BindingDB: IC50=>10000nM, Ki=45nM, EC50=3200nM
    24253 4i8v:B (2.6) BS02 BHF 1.14.14.1
    4.2.1.152    		 GO:0001666 ... P04798 23508959 BindingDB: IC50=>10000nM, Ki=45nM, EC50=3200nM
    24254 4i8v:C (2.6) BS02 BHF 1.14.14.1
    4.2.1.152    		 GO:0001666 ... P04798 23508959 BindingDB: IC50=>10000nM, Ki=45nM, EC50=3200nM
    24255 4i8v:D (2.6) BS02 BHF 1.14.14.1
    4.2.1.152    		 GO:0001666 ... P04798 23508959 BindingDB: IC50=>10000nM, Ki=45nM, EC50=3200nM
    24256 4i8w:A (1.96) BS01 G07 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P0C6F2 23877703 PDBbind: -logKd/Ki=10.90, Ki=12.7pM
    24257 4i8w:B (1.96) BS01 G07 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P0C6F2 23877703 MOAD: Ki=12.7pM
    PDBbind: -logKd/Ki=10.90, Ki=12.7pM
    24258 4i8x:A (2.23) BS01 6P3 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=2300uM
    PDBbind: -logKd/Ki=2.64, Kd=2.3mM
    24259 4i8x:B (2.23) BS01 6P3 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=2300uM
    24260 4i8x:C (2.23) BS01 6P3 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=2300uM
    PDBbind: -logKd/Ki=2.64, Kd=2.3mM
    24261 4i8x:D (2.23) BS01 6P3 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=2300uM
    24262 4i8x:E (2.23) BS01 6P3 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=2300uM
    24263 4i8x:F (2.23) BS01 6P3 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=2300uM
    24264 4i8x:G (2.23) BS01 6P3 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=2300uM
    24265 4i8x:H (2.23) BS01 6P3 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=2300uM
    24266 4i8z:A (1.75) BS01 G08 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P0C6F2 23877703 MOAD: Ki=8.9pM
    PDBbind: -logKd/Ki=11.05, Ki=8.9pM
    24267 4i8z:B (1.75) BS01 G08 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P0C6F2 23877703 PDBbind: -logKd/Ki=11.05, Ki=8.9pM
    24268 4i91:A (2.0) BS04 TMH 1.14.13.- GO:0004497 ... P20813 23786449 MOAD: Kd=0.22uM
    24269 4i9h:A (2.17) BS01 1E4 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=0.068uM
    PDBbind: -logKd/Ki=7.17, Kd=0.068uM
    24270 4i9h:B (2.17) BS01 1E4 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=0.068uM
    24271 4i9h:C (2.17) BS01 1E4 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=0.068uM
    PDBbind: -logKd/Ki=7.17, Kd=0.068uM
    24272 4i9h:D (2.17) BS01 1E4 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=0.068uM
    24273 4i9h:E (2.17) BS01 1E4 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=0.068uM
    24274 4i9h:F (2.17) BS01 1E4 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=0.068uM
    24275 4i9h:G (2.17) BS01 1E4 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=0.068uM
    24276 4i9h:H (2.17) BS01 1E4 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=0.068uM
    24277 4i9i:A (2.4) BS02 1DY 2.4.2.-
    2.4.2.30    		 GO:0003950 ... O95271 23316926 MOAD: ic50=0.008uM
    PDBbind: -logKd/Ki=8.10, IC50=0.008uM
    BindingDB: IC50=8.0nM
    24278 4i9i:B (2.4) BS02 1DY 2.4.2.-
    2.4.2.30    		 GO:0003950 ... O95271 23316926 MOAD: ic50=0.008uM
    BindingDB: IC50=8.0nM
    24279 4i9i:C (2.4) BS02 1DY 2.4.2.-
    2.4.2.30    		 GO:0003950 ... O95271 23316926 MOAD: ic50=0.008uM
    BindingDB: IC50=8.0nM
    24280 4i9i:D (2.4) BS02 1DY 2.4.2.-
    2.4.2.30    		 GO:0003950 ... O95271 23316926 MOAD: ic50=0.008uM
    BindingDB: IC50=8.0nM
    24281 4i9n:A (2.35) BS01 1E6 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=360uM
    24282 4i9n:A (2.35) BS02 1E5 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=1300uM
    24283 4i9n:B (2.35) BS01 1E6 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=360uM
    24284 4i9n:B (2.35) BS02 1E5 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=1300uM
    24285 4i9n:C (2.35) BS01 1E6 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=360uM
    24286 4i9n:C (2.35) BS02 1E5 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=1300uM
    24287 4i9n:D (2.35) BS01 1E6 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=360uM
    24288 4i9n:D (2.35) BS02 1E5 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=1300uM
    24289 4i9n:E (2.35) BS01 1E6 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=360uM
    24290 4i9n:E (2.35) BS02 1E5 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=1300uM
    24291 4i9n:F (2.35) BS01 1E6 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=360uM
    24292 4i9n:F (2.35) BS02 1E5 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=1300uM
    24293 4i9n:G (2.35) BS01 1E6 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=360uM
    24294 4i9n:G (2.35) BS02 1E5 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=1300uM
    24295 4i9n:H (2.35) BS01 1E6 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=360uM
    24296 4i9n:H (2.35) BS02 1E5 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=1300uM
    24297 4i9o:A (2.0) BS01 KI1 2.3.1.-
    2.3.1.48    		 GO:0003712 ... P45481 23384013 PDBbind: -logKd/Ki=5.72, Kd=1.9uM
    24298 4i9r:A (2.6) BS01 RET ? GO:0001972 ... P29373 24059243 PDBbind: -logKd/Ki=6.95, Kd=112nM
    24299 4i9s:A (2.58) BS01 RET ? GO:0001972 ... P29373 24059243 PDBbind: -logKd/Ki=6.79, Kd=162nM
    24300 4i9u:A (2.5) BS01 1E7 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=137uM
    PDBbind: -logKd/Ki=3.86, Kd=137uM
    24301 4i9u:B (2.5) BS01 1E7 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=137uM
    24302 4i9u:C (2.5) BS01 1E7 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=137uM
    24303 4i9u:D (2.5) BS01 1E7 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=137uM
    24304 4i9u:E (2.5) BS01 1E7 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=137uM
    24305 4i9u:F (2.5) BS01 1E7 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=137uM
    24306 4i9u:G (2.5) BS01 1E7 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=137uM
    24307 4i9u:H (2.5) BS01 1E7 1.1.1.27 GO:0003824 ... P13491 23302067 MOAD: Kd=137uM
    24308 4i9z:A (2.08) BS01 5BA 3.1.4.35 GO:0004114 ... O76074 23867165 MOAD: ic50=18.2nM
    PDBbind: -logKd/Ki=7.74, IC50=18.2nM
    BindingDB: IC50=18nM
    24309 4ia0:A (2.17) BS01 5BB 3.1.4.35 GO:0004114 ... O76074 23867165 MOAD: ic50=77nM
    PDBbind: -logKd/Ki=7.11, IC50=77nM
    BindingDB: IC50=77nM
    24310 4ia9:A (1.66) BS01 IA9 ? GO:0000122 ... P61964 24900672 BindingDB: Kd=380nM, IC50=339nM
    24311 4iaw:A (2.4) BS01 LIZ ? GO:0005506 ... P80188 23542582 MOAD: Kd=0.234nM
    PDBbind: -logKd/Ki=9.63, Kd=0.234nM
    24312 4iaw:B (2.4) BS01 LIZ ? GO:0005506 ... P80188 23542582 MOAD: Kd=0.234nM
    24313 4iaw:C (2.4) BS01 LIZ ? GO:0005506 ... P80188 23542582 MOAD: Kd=0.234nM
    24314 4iax:A (1.9) BS01 LIZ ? GO:0005506 ... P80188 23542582 MOAD: Kd=0.273nM
    PDBbind: -logKd/Ki=9.56, Kd=0.273nM
    24315 4ib6:A (2.2) BS01 DAO ? GO:0005515 ... P02754 23784992 MOAD: Ka=248000M^-1
    24316 4ibb:A (1.752) BS01 1DK ? N/A Q05127 24495995 MOAD: Kd=270.7uM
    PDBbind: -logKd/Ki=3.57, Kd=270.7uM
    24317 4ibb:B (1.752) BS01 1DK ? N/A Q05127 24495995 MOAD: Kd=270.7uM
    24318 4ibc:A (1.745) BS01 12G ? N/A Q05127 24495995 MOAD: Kd=1049uM
    PDBbind: -logKd/Ki=2.98, Kd=1049uM
    24319 4ibc:B (1.745) BS01 12G ? N/A Q05127 24495995 MOAD: Kd=1049uM
    24320 4ibd:A (1.84) BS01 1DL ? N/A Q05127 24495995 MOAD: Kd=214.6uM
    PDBbind: -logKd/Ki=3.67, Kd=214.6uM
    24321 4ibd:B (1.84) BS01 1DL ? N/A Q05127 24495995 MOAD: Kd=214.6uM
    24322 4ibe:A (1.95) BS01 11Y ? N/A Q05127 24495995 MOAD: Kd=70.6uM
    PDBbind: -logKd/Ki=4.15, Kd=70.6uM
    24323 4ibe:B (1.95) BS01 11Y ? N/A Q05127 24495995 MOAD: Kd=70.6uM
    24324 4ibf:A (2.291) BS01 1D5 ? N/A Q05127 24495995 MOAD: Kd=36.8uM
    PDBbind: -logKd/Ki=4.43, Kd=36.8uM
    24325 4ibf:B (2.291) BS01 1D5 ? N/A Q05127 24495995 MOAD: Kd=36.8uM
    24326 4ibg:A (1.413) BS01 1D6 ? N/A Q05127 24495995 MOAD: Kd=108uM
    PDBbind: -logKd/Ki=3.97, Kd=108.0uM
    24327 4ibg:B (1.413) BS01 1D6 ? N/A Q05127 24495995 MOAD: Kd=108uM
    PDBbind: -logKd/Ki=3.97, Kd=108.0uM
    24328 4ibi:A (1.473) BS01 1D8 ? N/A Q05127 24495995 MOAD: Kd=73uM
    PDBbind: -logKd/Ki=4.14, Kd=73.0uM
    24329 4ibi:B (1.473) BS01 1D8 ? N/A Q05127 24495995 MOAD: Kd=73uM
    24330 4ibj:A (1.54) BS01 1D9 ? N/A Q05127 24495995 MOAD: Kd=47uM
    PDBbind: -logKd/Ki=4.33, Kd=47.0uM
    24331 4ibj:B (1.54) BS01 1D9 ? N/A Q05127 24495995 MOAD: Kd=47uM
    24332 4ibk:A (1.85) BS01 1DE ? N/A Q05127 24495995 MOAD: Kd=50.4uM
    PDBbind: -logKd/Ki=4.30, Kd=50.4uM
    24333 4ibk:B (1.85) BS01 1DE ? N/A Q05127 24495995 MOAD: Kd=50.4uM
    24334 4ibm:A (1.8) BS01 IR1 2.7.10.1 GO:0004672 ... P06213 23935097 MOAD: ic50=1.8uM
    PDBbind: -logKd/Ki=5.74, IC50=1.8uM
    24335 4ibm:B (1.8) BS01 IR1 2.7.10.1 GO:0004672 ... P06213 23935097 MOAD: ic50=1.8uM
    24336 4ic0:A (2.32) BS01 GDE ? GO:0001525 ... P05121 N/A BindingDB: IC50=6.6e+3nM
    24337 4ic0:C (2.32) BS01 GDE ? GO:0001525 ... P05121 N/A BindingDB: IC50=6.6e+3nM
    24338 4icc:X (1.752) BS02 64I 1.1.1.300
    1.1.1.54    		 GO:0001523 ... O60218 24598757 MOAD: ic50=1uM
    24339 4ict:A (1.8) BS02 1ED 1.14.19.70 GO:0004497 ... P9WPP7 23620594 MOAD: Kd=45.6uM
    BindingDB: Kd=80800nM
    24340 4id7:A (3.0) BS01 1G0 2.7.10.2
    2.7.11.1    		 GO:0004672 ... Q07912 23317569 BindingDB: IC50=152.6nM
    24341 4idn:A (2.252) BS01 GNP 3.6.5.- GO:0003924 ... Q8WXF7 23334294 MOAD: Kd=5.77uM
    PDBbind: -logKd/Ki=5.24, Kd=5.77uM
    24342 4idn:B (2.252) BS01 GNP 3.6.5.- GO:0003924 ... Q8WXF7 23334294 MOAD: Kd=5.77uM
    PDBbind: -logKd/Ki=5.24, Kd=5.77uM
    24343 4ido:A (2.091) BS01 GDP 3.6.5.- GO:0003924 ... Q8WXF7 23334294 PDBbind: -logKd/Ki=4.93, Kd=11.63uM
    24344 4ido:B (2.091) BS01 GDP 3.6.5.- GO:0003924 ... Q8WXF7 23334294 PDBbind: -logKd/Ki=4.93, Kd=11.63uM
    24345 4idt:A (2.4) BS01 T28 2.7.11.25 GO:0004672 ... Q99558 23374866 MOAD: ic50=0.1uM
    PDBbind: -logKd/Ki=7.00, IC50=0.1uM
    BindingDB: IC50=4600nM
    24346 4idt:B (2.4) BS01 T28 2.7.11.25 GO:0004672 ... Q99558 23374866 MOAD: ic50=0.1uM
    BindingDB: IC50=4600nM
    24347 4idv:A (2.9) BS01 13V 2.7.11.25 GO:0004672 ... Q99558 23374866 PDBbind: -logKd/Ki=7.40, IC50=0.04uM
    BindingDB: IC50=20nM
    24348 4idv:B (2.9) BS01 13V 2.7.11.25 GO:0004672 ... Q99558 23374866 BindingDB: IC50=20nM
    24349 4idv:C (2.9) BS01 13V 2.7.11.25 GO:0004672 ... Q99558 23374866 BindingDB: IC50=20nM
    24350 4idv:D (2.9) BS01 13V 2.7.11.25 GO:0004672 ... Q99558 23374866 BindingDB: IC50=20nM
    24351 4ie0:A (2.53) BS02 PD2 1.14.11.-
    1.14.11.53    		 GO:0001659 ... Q9C0B1 23547775 PDBbind: -logKd/Ki=5.08, IC50=8.3uM
    BindingDB: IC50=8300nM
    24352 4ie2:A (2.2082) BS03 1EC 3.5.3.1 GO:0004053 ... P78540 23453840 MOAD: ic50=4500nM
    PDBbind: -logKd/Ki=5.35, IC50=4.5uM
    24353 4ie2:B (2.2082) BS03 1EC 3.5.3.1 GO:0004053 ... P78540 23453840 MOAD: ic50=4500nM
    24354 4ie2:C (2.2082) BS03 1EC 3.5.3.1 GO:0004053 ... P78540 23453840 MOAD: ic50=4500nM
    24355 4ie3:A (2.3522) BS03 1EE 3.5.3.1 GO:0004053 ... P78540 23453840 MOAD: ic50=980nM
    PDBbind: -logKd/Ki=6.01, IC50=980nM
    24356 4ie3:B (2.3522) BS03 1EE 3.5.3.1 GO:0004053 ... P78540 23453840 MOAD: ic50=980nM
    24357 4ie3:C (2.3522) BS03 1EE 3.5.3.1 GO:0004053 ... P78540 23453840 MOAD: ic50=980nM
    24358 4ie4:A (2.5048) BS02 8XQ 1.14.11.-
    1.14.11.53    		 GO:0001659 ... Q9C0B1 23547775 MOAD: ic50=3.3uM
    PDBbind: -logKd/Ki=5.48, IC50=3.3uM
    BindingDB: IC50=3300nM
    24359 4ie5:A (1.95) BS02 MD6 1.14.11.-
    1.14.11.53    		 GO:0001659 ... Q9C0B1 23547775 MOAD: ic50=15uM
    PDBbind: -logKd/Ki=4.82, IC50=15uM
    BindingDB: IC50=15000nM
    24360 4ie6:A (2.5036) BS02 UN9 1.14.11.-
    1.14.11.53    		 GO:0001659 ... Q9C0B1 23547775 MOAD: ic50=2.8uM
    PDBbind: -logKd/Ki=5.55, IC50=2.8uM
    BindingDB: IC50=2800nM
    24361 4ie7:A (2.6004) BS02 RHN 1.14.11.-
    1.14.11.53    		 GO:0001659 ... Q9C0B1 23547775 PDBbind: -logKd/Ki=5.05, IC50=9.0uM
    24362 4ieh:A (2.1) BS01 1E9 ? GO:0042981 ... P10415
    Q07817    		 24900652 MOAD: Kd=14nM
    PDBbind: -logKd/Ki=7.85, Kd=14nM
    24363 4ifh:B (3.286) BS02 1EF 3.4.24.56 GO:0001618 ... P14735 26394692 PDBbind: -logKd/Ki=5.21, IC50=6.1uM
    24364 4ifn:X (2.4) BS01 12O ? N/A Q14145 N/A BindingDB: Kd=700000nM
    24365 4ige:A (2.15) BS01 CHJ 1.3.1.9 GO:0004318 ... C6KSZ2 24063369 MOAD: ic50=0.25uM
    24366 4ige:B (2.15) BS01 CHJ 1.3.1.9 GO:0004318 ... C6KSZ2 24063369 MOAD: ic50=0.25uM
    24367 4igf:A (2.3) BS01 CHV 1.3.1.9 GO:0004318 ... C6KSZ2 24063369 MOAD: ic50=6uM
    24368 4igf:B (2.3) BS01 CHV 1.3.1.9 GO:0004318 ... C6KSZ2 24063369 MOAD: ic50=6uM
    24369 4igh:A (1.3) BS02 1EA 1.3.5.2 GO:0004151 ... Q02127 23930152 MOAD: ic50=1nM
    BindingDB: IC50=1.000000nM
    24370 4igr:A (2.65) BS01 3ZA ? GO:0015276 ... P42264 23414088 PDBbind: -logKd/Ki=7.20, Kd=63nM
    BindingDB: Ki=123nM
    24371 4igs:A (0.85) BS02 64I 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54    		 GO:0001523 ... P15121 24598757 MOAD: ic50=0.3uM
    24372 4igt:A (1.24) BS01 3ZA ? GO:0015276 ... P19491 23414088 MOAD: Kd=12.8nM
    PDBbind: -logKd/Ki=7.89, Kd=12.8nM
    BindingDB: Ki=126000nM
    24373 4ih3:A (2.493) BS02 PDC 4.1.1.45 GO:0001760 ... Q8TDX5 25392945 PDBbind: -logKd/Ki=4.82, Ki=15.2uM
    24374 4ih3:F (2.493) BS02 PDC 4.1.1.45 GO:0001760 ... Q8TDX5 25392945 PDBbind: -logKd/Ki=4.82, Ki=15.2uM
    24375 4ih5:A (1.9) BS01 12R 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 23509929 MOAD: Kd=78uM
    PDBbind: -logKd/Ki=4.11, Kd=78uM
    24376 4ih5:B (1.9) BS01 12R 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 23509929 MOAD: Kd=78uM
    24377 4ih6:A (2.2) BS01 1EP 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 23509929 MOAD: Kd=18uM
    PDBbind: -logKd/Ki=4.74, Kd=18uM
    24378 4ih6:B (2.2) BS01 1EP 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 23509929 MOAD: Kd=18uM
    24379 4ih7:A (2.3) BS01 1ER 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 23509929 MOAD: Kd=5.8uM
    PDBbind: -logKd/Ki=5.24, Kd=5.8uM
    24380 4ih7:B (2.3) BS01 1ER 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 23509929 MOAD: Kd=5.8uM
    24381 4ihl:A (2.2) BS02 1F5 ? GO:0000122 ... P63104 23808890 BindingDB: Kd=9.0nM
    24382 4ihl:B (2.2) BS02 1F5 ? GO:0000122 ... P63104 23808890 BindingDB: Kd=9.0nM
    24383 4ihp:A (2.27) BS01 1FB 2.7.11.17 GO:0004672 ... Q9BJF5 N/A BindingDB: IC50=10.0nM
    24384 4ihv:A (2.716) BS01 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=28nM
    24385 4ihv:A (2.716) BS02 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=28nM
    24386 4ihv:B (2.716) BS01 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=28nM
    24387 4ihv:B (2.716) BS02 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=28nM
    24388 4ihw:A (2.7) BS01 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=0.5nM
    24389 4ihw:A (2.7) BS02 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=0.5nM
    24390 4ihw:B (2.7) BS01 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=0.5nM
    24391 4ihw:B (2.7) BS02 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=0.5nM
    24392 4ihx:A (2.8) BS01 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=70nM
    24393 4ihx:A (2.8) BS02 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=70nM
    24394 4ihx:B (2.8) BS01 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=70nM
    24395 4ihx:B (2.8) BS02 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=70nM
    24396 4ihy:A (2.9) BS01 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=1.7nM
    24397 4ihy:A (2.9) BS02 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=1.7nM
    24398 4ihy:B (2.9) BS01 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=1.7nM
    24399 4ihy:B (2.9) BS02 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=1.7nM
    24400 4ii9:A (1.66) BS03 UDP 2.3.2.10 GO:0008360 ... Q9EY50 23744707 PDBbind: -logKd/Ki=6.03, IC50=0.93uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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