Structure of PDB 5obm Chain d6
Receptor sequence
| >5obmd6 (length=97) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence] |
| PKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVR DLSEASVYPEYALPKTYNKLHYCVSCAIHARIVRVRSREDRKNRAPP |
3D structure
| PDB | 5obm Aminoglycoside interactions and impacts on the eukaryotic ribosome. | ||
| Chain | d6 | ||
| Resolution | 3.4 Å | ||
| 3D structure |
|
Enzymatic activity
| Enzyme Commision number | ? |
Interaction with ligand
| Site # |
Ligand | Ligand chain |
Binding residues on receptor (original residue number in PDB) |
Binding residues on receptor (residue number reindexed from 1) |
Binding affinity |
|---|---|---|---|---|---|
| BS01 | rna | d6 | P2 K3 K4 R5 A6 S7 N8 G9 R10 K12 K13 G14 R15 H17 K19 P20 K32 K34 K37 R38 K70 V75 S76 I79 H80 R82 V84 R85 V86 R87 S88 R92 R95 P98 | P1 K2 K3 R4 A5 S6 N7 G8 R9 K11 K12 G13 R14 H16 K18 P19 K31 K33 K36 R37 K69 V74 S75 I78 H79 R81 V83 R84 V85 R86 S87 R91 R94 P97 | |
| BS02 | ZN | d6 | C23 C26 C74 C77 | C22 C25 C73 C76 |
Gene Ontology
| Molecular Function | |
|---|---|
| GO:0003735 | structural constituent of ribosome |
