Structure of PDB 8e5l Chain c
Receptor sequence
| >8e5lc (length=417) Species: 562 (Escherichia coli) [Search protein sequence] |
| MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIF GDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGK IRPPKEGERYFALLKVNEVNFDKPENARNKILFENLTPLHANSRLRMERG NGSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHP DCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKA KRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIA EKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLI NKLAMTKTNDDFFEMMK |
3D structure
| PDB | 8e5l Structural basis of Rho-dependent transcription termination. | ||
| Chain | c | ||
| Resolution | 4.2 Å | ||
| 3D structure |
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Enzymatic activity
| Enzyme Commision number | 3.6.4.- |
Interaction with ligand
| Site # |
Ligand | Ligand chain |
Binding residues on receptor (original residue number in PDB) |
Binding residues on receptor (residue number reindexed from 1) |
Binding affinity |
|---|---|---|---|---|---|
| BS01 | rna | c | K283 V284 L285 T286 G287 G288 K326 | K283 V284 L285 T286 G287 G288 K326 | |
| BS02 | ADP | c | A182 G183 K184 T185 M186 F355 | A182 G183 K184 T185 M186 F355 | |
| BS03 | BEF | c | P180 K184 | P180 K184 | |
| BS04 | ADP | c | R366 K367 | R366 K367 |
Gene Ontology
| Molecular Function | |
|---|---|
| GO:0003676 | nucleic acid binding |
| GO:0003723 | RNA binding |
| GO:0004386 | helicase activity |
| GO:0005515 | protein binding |
| GO:0005524 | ATP binding |
| GO:0008186 | ATP-dependent activity, acting on RNA |
| GO:0016787 | hydrolase activity |
| GO:0016887 | ATP hydrolysis activity |
| GO:0042802 | identical protein binding |
