Structure of PDB 8f5y Chain B

Receptor sequence
>8f5yB (length=237) Species: 9606 (Homo sapiens) [Search protein sequence]
GLTEEQRMMIRELMDAQMKTFDTTFSHFKNFRLPGVKVSLQLRGEDGSVW
NYKPPSLLPHMADMSTYMFKGIISFAKVISYFRDLPIEDQISLLKGAAFE
LCQLRFNTVFNAETGTWECGRLSYCLEPMLKFHYMLKKLQLHEEEYVLMQ
AISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNRPQPAHRFLFLKIM
AMLTELRSINAQHTQRLLRIQDIHPFATPLMQELFGI
3D structure
PDB8f5y A bromodomain-independent mechanism of gene regulation by the BET inhibitor JQ1: direct activation of nuclear receptor PXR.
ChainB
Resolution2.15 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B K259 I269 K277 E427 K77 I87 K95 E233
BS02 JQ1 B L240 M243 S247 F281 Q285 W299 M323 H407 F420 L58 M61 S65 F99 Q103 W117 M129 H213 F226
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0004879 nuclear receptor activity
Biological Process
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:8f5y, PDBe:8f5y, PDBj:8f5y
PDBsum8f5y
PubMed38084912
UniProtO75469|NR1I2_HUMAN Nuclear receptor subfamily 1 group I member 2 (Gene Name=NR1I2)

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