Structure of PDB 4h57 Chain A Binding Site BS05
Receptor Information
>4h57 Chain A (length=316) Species:
1427
(Bacillus thermoproteolyticus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
ITGTSTVGVGRGVLGDQKNINTTYSTYYYLQDNTRGNGIFTYDAKYRTTL
PGSLWADADNQFFASYDAPAVDAHYYAGVTYDYYKNVHNRLSYDGNNAAI
RSSVHYSQGYNNAFWNGSQMVYGDGDGQTFIPLSGGIDVVAHELTHAVTD
YTAGLIYQNESGAINEAISDIFGTLVEFYANKNPDWEIGEDVYTPGISGD
SLRSMSDPAKYGDPDHYSKRYTGTQDNGGVHINSGIINKAAYLISQGGTH
YGVSVVGIGRDKLGKIFYRALTQYLTPTSNFSQLRAAAVQSATDLYGSTS
QEVASVKQAFDAVGVK
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
4h57 Chain A Residue 405 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4h57
Dissecting the hydrophobic effect on the molecular level: the role of water, enthalpy, and entropy in ligand binding to thermolysin.
Resolution
1.56 Å
Binding residue
(original residue number in PDB)
H142 H146 E166
Binding residue
(residue number reindexed from 1)
H142 H146 E166
Annotation score
4
Enzymatic activity
Catalytic site (original residue number in PDB)
H142 E143 H146 Y157 E166 D226 H231
Catalytic site (residue number reindexed from 1)
H142 E143 H146 Y157 E166 D226 H231
Enzyme Commision number
3.4.24.27
: thermolysin.
Gene Ontology
Molecular Function
GO:0004222
metalloendopeptidase activity
Biological Process
GO:0006508
proteolysis
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:4h57
,
PDBe:4h57
,
PDBj:4h57
PDBsum
4h57
PubMed
23283700
UniProt
P00800
|THER_BACTH Thermolysin (Gene Name=npr)
[
Back to BioLiP
]