Structure of PDB 8coz Chain B Binding Site BS03

Receptor Information
>8coz Chain B (length=335) Species: 5855 (Plasmodium vivax) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KFNDEYRNLQWGLDLARLDETQDLINANRVSVTKICVIDSGIDYNHPDLR
NNIDVNVKELHGRKGVDDDSNGVVDDVYGANFVSNSGDPMDDNYHGTHVS
GIISAVGNNGIGIVGVDGHSKLVICKALDQHKLGRLGDMFKCIDYCISRQ
AHMISGSFSFDEYSNIFSASVEHLRSLGILFFVSASNCAHDDIAKCDLAV
NHRYPPILSKTHNNVIAVANLKRDLDESYSLSVNSFYSNIYCQLAAPGTN
IYSTTPMNNYRKLNGTSMASPHVAAIASIVRSINPNLTYLQIVEILRNAI
VKLPSLTERVSWGGYVDILRAVNLAIDSKAAPYIK
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain8coz Chain B Residue 703 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8coz 3D structures of the Plasmodium vivax subtilisin-like drug target SUB1 reveal conformational changes to accommodate a substrate-derived alpha-ketoamide inhibitor.
Resolution1.438 Å
Binding residue
(original residue number in PDB)		D281 D325 V383 N386 I388 I390
Binding residue
(residue number reindexed from 1)		D4 D48 V106 N109 I111 I113
Annotation score4
Enzymatic activity
Enzyme Commision number 3.4.21.62: subtilisin.
Gene Ontology
Molecular Function
GO:0004252 serine-type endopeptidase activity
GO:0008236 serine-type peptidase activity
Biological Process
GO:0006508 proteolysis

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:8coz, PDBe:8coz, PDBj:8coz
PDBsum8coz
PubMed37428845
UniProtE6Y8B9

[Back to BioLiP]